ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart49c04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT016451.1| Zea mays clone Contig284 mRNA sequence 200 3e-48
2dbj|AK069888.1| Oryza sativa (japonica cultivar-group) cDNA clon... 200 3e-48
3ref|XM_483658.1| Oryza sativa (japonica cultivar-group), mRNA 184 2e-43
4dbj|AK073266.1| Oryza sativa (japonica cultivar-group) cDNA clon... 184 2e-43
5gb|AY109631.1| Zea mays CL5026_1 mRNA sequence 176 5e-41
6dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 143 7e-31
7dbj|AP006067.3| Oryza sativa (japonica cultivar-group) genomic D... 143 7e-31
8dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 121 2e-24
9dbj|AP004704.3| Oryza sativa (japonica cultivar-group) genomic D... 121 2e-24
10dbj|AP006265.2| Oryza sativa (japonica cultivar-group) genomic D... 121 2e-24
11gb|AY103990.1| Zea mays PCO093361 mRNA sequence 113 6e-22
12gb|AY084453.1| Arabidopsis thaliana clone 108568 mRNA, complete ... 44 0.46
13emb|CR538723.1| M.truncatula DNA sequence from clone MTH2-27D24 ... 42 1.8
14emb|BX248356.1| Corynebacterium diphtheriae gravis NCTC13129, co... 42 1.8
15emb|CR354385.15| Zebrafish DNA sequence from clone DKEY-6F10 in ... 42 1.8
16gb|AC168222.2| Mus musculus BAC clone CH25-395E5 from chromosome... 40 7.1
17emb|CR676994.3|CNS0FLBY Tetraodon nigroviridis full-length cDNA 40 7.1
18emb|CR675901.3|CNS0FKHV Tetraodon nigroviridis full-length cDNA 40 7.1
19gb|AC010069.9| Drosophila melanogaster 3L BAC RP98-17C18 (Roswel... 40 7.1
20emb|CR385029.5| Opossum DNA sequence from clone XX-191G11, compl... 40 7.1
21gb|AY122226.1| Drosophila melanogaster RE25373 full insert cDNA 40 7.1
22ref|XM_932008.1| PREDICTED: Homo sapiens hypothetical protein LO... 40 7.1
23gb|AY553175.1| Odontotermes formosanus 16S ribosomal RNA gene, p... 40 7.1
24emb|BX822276.1|CNS0A5UY Arabidopsis thaliana Full-length cDNA Co... 40 7.1
25gb|AF262616.1|AF262616 Odontotermes formosanus 16S ribosomal RNA... 40 7.1
26gb|AC110619.3| Homo sapiens BAC clone RP11-649N20 from 2, comple... 40 7.1
27gb|AC008273.2| Homo sapiens BAC clone RP11-150O2 from 2, complet... 40 7.1
28gb|AE003524.5| Drosophila melanogaster chromosome 3L, section 61... 40 7.1
29gb|AC133102.4| Mus musculus BAC clone RP23-173H19 from 1, comple... 40 7.1
30dbj|D89833.1| Odontotermes formosanus mitochondrial gene for 16S... 40 7.1 
>gb|BT016451.1| Zea mays clone Contig284 mRNA sequence
          Length = 1321

 Score =  200 bits (101), Expect = 3e-48
 Identities = 146/161 (90%)
 Strand = Plus / Minus

                                                                        
Query: 337  gaggtagaaacttctgcactgcacatagggcataccttatttatttgaagccactgattg 396
            ||||| || |||||||||||||||||||||||||||||||||||||| |||||||| || 
Sbjct: 1003 gaggttgatacttctgcactgcacatagggcataccttatttatttgcagccactggttt 944

                                                                        
Query: 397  atgcagtcaggatggtatgaatgattgcagggaagtgcaaccaaagattcaccttcctca 456
            ||||| |||||||||||| | || |||||||||||||||| |||||||||||| ||||| 
Sbjct: 943  atgcattcaggatggtataagtgcttgcagggaagtgcaatcaaagattcaccctcctcc 884

                                                     
Query: 457  aactccacacgacaaattacacattgttctgtgttgccatc 497
            || |||||||| |||||||||||||| ||||||||||||||
Sbjct: 883  aattccacacggcaaattacacattgctctgtgttgccatc 843
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>dbj|AK069888.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023039O04, full
            insert sequence
          Length = 1320

 Score =  200 bits (101), Expect = 3e-48
 Identities = 185/213 (86%)
 Strand = Plus / Minus

                                                                        
Query: 314  ttggtcatgcctgcttgtttgctgaggtagaaacttctgcactgcacatagggcatacct 373
            ||||||||||||| ||| |  | || || |||||||| || |||||||| ||||| ||||
Sbjct: 1030 ttggtcatgcctggttgctgtccgatgtggaaacttccgcgctgcacatcgggcaaacct 971

                                                                        
Query: 374  tatttatttgaagccactgattgatgcagtcaggatggtatgaatgattgcagggaagtg 433
            |||||||||||||||| || || ||||| ||||||||||||||||| |||||||| ||||
Sbjct: 970  tatttatttgaagccattggtttatgcactcaggatggtatgaatgcttgcaggggagtg 911

                                                                        
Query: 434  caaccaaagattcaccttcctcaaactccacacgacaaattacacattgttctgtgttgc 493
            ||| |||||||||||| |||||||| |||||||||||||| |||||||| ||||||||||
Sbjct: 910  caatcaaagattcaccatcctcaaattccacacgacaaataacacattgctctgtgttgc 851

                                             
Query: 494  catcttgcatatcttttgttttgtaagttactg 526
            ||||||| | | ||| ||  |||||||||||||
Sbjct: 850  catcttggacaccttctgccttgtaagttactg 818
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>ref|XM_483658.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1356

 Score =  184 bits (93), Expect = 2e-43
 Identities = 150/169 (88%)
 Strand = Plus / Minus

                                                                       
Query: 340 gtagaaacttctgcactgcacatagggcataccttatttatttgaagccactgattgatg 399
           |||| |||||| |||||||||||||||||||||||||||| ||| ||||| || || |||
Sbjct: 966 gtaggaacttcagcactgcacatagggcataccttatttaattgcagccattggtttatg 907

                                                                       
Query: 400 cagtcaggatggtatgaatgattgcagggaagtgcaaccaaagattcaccttcctcaaac 459
           || |||| |||||||||||| ||||| |||||||||||||| ||||||||||||||||| 
Sbjct: 906 cattcagaatggtatgaatgcttgcaaggaagtgcaaccaatgattcaccttcctcaaat 847

                                                            
Query: 460 tccacacgacaaattacacattgttctgtgttgccatcttgcatatctt 508
           |||||||| ||||| |||||||||||  ||||||| |||||| ||||||
Sbjct: 846 tccacacggcaaataacacattgttccatgttgccgtcttgcttatctt 798
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>dbj|AK073266.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033029A20, full
           insert sequence
          Length = 1356

 Score =  184 bits (93), Expect = 2e-43
 Identities = 150/169 (88%)
 Strand = Plus / Minus

                                                                       
Query: 340 gtagaaacttctgcactgcacatagggcataccttatttatttgaagccactgattgatg 399
           |||| |||||| |||||||||||||||||||||||||||| ||| ||||| || || |||
Sbjct: 966 gtaggaacttcagcactgcacatagggcataccttatttaattgcagccattggtttatg 907

                                                                       
Query: 400 cagtcaggatggtatgaatgattgcagggaagtgcaaccaaagattcaccttcctcaaac 459
           || |||| |||||||||||| ||||| |||||||||||||| ||||||||||||||||| 
Sbjct: 906 cattcagaatggtatgaatgcttgcaaggaagtgcaaccaatgattcaccttcctcaaat 847

                                                            
Query: 460 tccacacgacaaattacacattgttctgtgttgccatcttgcatatctt 508
           |||||||| ||||| |||||||||||  ||||||| |||||| ||||||
Sbjct: 846 tccacacggcaaataacacattgttccatgttgccgtcttgcttatctt 798
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>gb|AY109631.1| Zea mays CL5026_1 mRNA sequence
          Length = 1299

 Score =  176 bits (89), Expect = 5e-41
 Identities = 143/161 (88%)
 Strand = Plus / Minus

                                                                       
Query: 337 gaggtagaaacttctgcactgcacatagggcataccttatttatttgaagccactgattg 396
           ||||| || |||||||| ||||||||||||||||||||||||||||| |||||||| || 
Sbjct: 995 gaggttgatacttctgcgctgcacatagggcataccttatttatttgcagccactggttt 936

                                                                       
Query: 397 atgcagtcaggatggtatgaatgattgcagggaagtgcaaccaaagattcaccttcctca 456
           ||||| |||||||||||| | || |||||||| ||||||| |||||||||||| ||||| 
Sbjct: 935 atgcattcaggatggtataagtgcttgcaggggagtgcaatcaaagattcaccctcctcc 876

                                                    
Query: 457 aactccacacgacaaattacacattgttctgtgttgccatc 497
           || |||||||| |||||||| ||||| ||||||||||||||
Sbjct: 875 aattccacacggcaaattacgcattgctctgtgttgccatc 835
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score =  143 bits (72), Expect = 7e-31
 Identities = 102/112 (91%)
 Strand = Plus / Minus

                                                                            
Query: 369      taccttatttatttgaagccactgattgatgcagtcaggatggtatgaatgattgcaggg 428
                ||||||||||||||||||||| || || ||||| ||||||||||||||||| ||||||||
Sbjct: 20738812 taccttatttatttgaagccattggtttatgcactcaggatggtatgaatgcttgcaggg 20738753

                                                                    
Query: 429      aagtgcaaccaaagattcaccttcctcaaactccacacgacaaattacacat 480
                 ||||||| |||||||||||| |||||||| |||||||||||||| ||||||
Sbjct: 20738752 gagtgcaatcaaagattcaccatcctcaaattccacacgacaaataacacat 20738701
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>dbj|AP006067.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0569E11
          Length = 157319

 Score =  143 bits (72), Expect = 7e-31
 Identities = 102/112 (91%)
 Strand = Plus / Minus

                                                                         
Query: 369   taccttatttatttgaagccactgattgatgcagtcaggatggtatgaatgattgcaggg 428
             ||||||||||||||||||||| || || ||||| ||||||||||||||||| ||||||||
Sbjct: 13841 taccttatttatttgaagccattggtttatgcactcaggatggtatgaatgcttgcaggg 13782

                                                                 
Query: 429   aagtgcaaccaaagattcaccttcctcaaactccacacgacaaattacacat 480
              ||||||| |||||||||||| |||||||| |||||||||||||| ||||||
Sbjct: 13781 gagtgcaatcaaagattcaccatcctcaaattccacacgacaaataacacat 13730
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score =  121 bits (61), Expect = 2e-24
 Identities = 100/113 (88%)
 Strand = Plus / Minus

                                                                            
Query: 368      ataccttatttatttgaagccactgattgatgcagtcaggatggtatgaatgattgcagg 427
                |||||||||||| ||| ||||| || || ||||| |||| |||||||||||| ||||| |
Sbjct: 27497066 ataccttatttaattgcagccattggtttatgcattcagaatggtatgaatgcttgcaag 27497007

                                                                     
Query: 428      gaagtgcaaccaaagattcaccttcctcaaactccacacgacaaattacacat 480
                ||||||||||||| ||||||||||||||||| |||||||| ||||| ||||||
Sbjct: 27497006 gaagtgcaaccaatgattcaccttcctcaaattccacacggcaaataacacat 27496954



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                                  
Query: 340      gtagaaacttctgcactgcacatagggcatacct 373
                |||| |||||| ||||||||||||||||||||||
Sbjct: 27497340 gtaggaacttcagcactgcacatagggcatacct 27497307
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>dbj|AP004704.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0544G09
          Length = 137481

 Score =  121 bits (61), Expect = 2e-24
 Identities = 100/113 (88%)
 Strand = Plus / Minus

                                                                          
Query: 368    ataccttatttatttgaagccactgattgatgcagtcaggatggtatgaatgattgcagg 427
              |||||||||||| ||| ||||| || || ||||| |||| |||||||||||| ||||| |
Sbjct: 123861 ataccttatttaattgcagccattggtttatgcattcagaatggtatgaatgcttgcaag 123802

                                                                   
Query: 428    gaagtgcaaccaaagattcaccttcctcaaactccacacgacaaattacacat 480
              ||||||||||||| ||||||||||||||||| |||||||| ||||| ||||||
Sbjct: 123801 gaagtgcaaccaatgattcaccttcctcaaattccacacggcaaataacacat 123749



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                                
Query: 340    gtagaaacttctgcactgcacatagggcatacct 373
              |||| |||||| ||||||||||||||||||||||
Sbjct: 124135 gtaggaacttcagcactgcacatagggcatacct 124102
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>dbj|AP006265.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1112_E06
          Length = 95069

 Score =  121 bits (61), Expect = 2e-24
 Identities = 100/113 (88%)
 Strand = Plus / Minus

                                                                         
Query: 368   ataccttatttatttgaagccactgattgatgcagtcaggatggtatgaatgattgcagg 427
             |||||||||||| ||| ||||| || || ||||| |||| |||||||||||| ||||| |
Sbjct: 60315 ataccttatttaattgcagccattggtttatgcattcagaatggtatgaatgcttgcaag 60256

                                                                  
Query: 428   gaagtgcaaccaaagattcaccttcctcaaactccacacgacaaattacacat 480
             ||||||||||||| ||||||||||||||||| |||||||| ||||| ||||||
Sbjct: 60255 gaagtgcaaccaatgattcaccttcctcaaattccacacggcaaataacacat 60203



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                               
Query: 340   gtagaaacttctgcactgcacatagggcatacct 373
             |||| |||||| ||||||||||||||||||||||
Sbjct: 60589 gtaggaacttcagcactgcacatagggcatacct 60556
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>gb|AY103990.1| Zea mays PCO093361 mRNA sequence
          Length = 1316

 Score =  113 bits (57), Expect = 6e-22
 Identities = 153/185 (82%)
 Strand = Plus / Minus

                                                                        
Query: 317  gtcatgcctgcttgtttgctgaggtagaaacttctgcactgcacatagggcataccttat 376
            ||||||||||||||||  | || || | |||||| ||||||||||| ||||||||||| |
Sbjct: 1087 gtcatgcctgcttgttcacagaagtgggaacttcagcactgcacatcgggcataccttgt 1028

                                                                        
Query: 377  ttatttgaagccactgattgatgcagtcaggatggtatgaatgattgcagggaagtgcaa 436
            |||  || |||||||| || ||||| |||| |||||||| ||| ||||| || |||||||
Sbjct: 1027 ttagctgcagccactggtttatgcactcagaatggtatggatgtttgcaagggagtgcaa 968

                                                                        
Query: 437  ccaaagattcaccttcctcaaactccacacgacaaattacacattgttctgtgttgccat 496
            | || || || || || |||||||| |||||||||||  |||| |||||  |||||||||
Sbjct: 967  ctaatgactcgccctcgtcaaactcgacacgacaaatagcacactgttccatgttgccat 908

                 
Query: 497  cttgc 501
            |||||
Sbjct: 907  cttgc 903
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>gb|AY084453.1| Arabidopsis thaliana clone 108568 mRNA, complete sequence
          Length = 1266

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 343  gaaacttctgcactgcacatagggcataccttatttat 380
            ||||||||||||||||| |  ||||| |||||||||||
Sbjct: 1104 gaaacttctgcactgcatacggggcaaaccttatttat 1067
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>emb|CR538723.1| M.truncatula DNA sequence from clone MTH2-27D24 on chromosome 3,
             complete sequence
          Length = 106695

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 497   cttgcatatcttttgttttgt 517
             |||||||||||||||||||||
Sbjct: 62229 cttgcatatcttttgttttgt 62249
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>emb|BX248356.1| Corynebacterium diphtheriae gravis NCTC13129, complete genome; segment
              3/8
          Length = 347625

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 360    catagggcataccttatttat 380
              |||||||||||||||||||||
Sbjct: 229592 catagggcataccttatttat 229572
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>emb|CR354385.15| Zebrafish DNA sequence from clone DKEY-6F10 in linkage group 20,
             complete sequence
          Length = 121619

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 308   cgactgttggtcatgcctgcttgtt 332
             |||||||||||||||||| ||||||
Sbjct: 13288 cgactgttggtcatgcctacttgtt 13264
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>gb|AC168222.2| Mus musculus BAC clone CH25-395E5 from chromosome 10, complete sequence
          Length = 96290

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 282   tgatgaagatgaagttggtt 301
             ||||||||||||||||||||
Sbjct: 48947 tgatgaagatgaagttggtt 48966
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>emb|CR676994.3|CNS0FLBY Tetraodon nigroviridis full-length cDNA
          Length = 1351

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 184  cttctgctgcctgctttggc 203
            ||||||||||||||||||||
Sbjct: 1285 cttctgctgcctgctttggc 1266
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>emb|CR675901.3|CNS0FKHV Tetraodon nigroviridis full-length cDNA
          Length = 1310

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 184  cttctgctgcctgctttggc 203
            ||||||||||||||||||||
Sbjct: 1244 cttctgctgcctgctttggc 1225
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>gb|AC010069.9| Drosophila melanogaster 3L BAC RP98-17C18 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 166352

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 498    ttgcatatcttttgttttgt 517
              ||||||||||||||||||||
Sbjct: 121106 ttgcatatcttttgttttgt 121087
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>emb|CR385029.5| Opossum DNA sequence from clone XX-191G11, complete sequence
          Length = 123110

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 477    acattgttctgtgttgccat 496
              ||||||||||||||||||||
Sbjct: 116952 acattgttctgtgttgccat 116971
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>gb|AY122226.1| Drosophila melanogaster RE25373 full insert cDNA
          Length = 2187

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 498  ttgcatatcttttgttttgt 517
            ||||||||||||||||||||
Sbjct: 2173 ttgcatatcttttgttttgt 2154
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>ref|XM_932008.1| PREDICTED: Homo sapiens hypothetical protein LOC644126 (LOC644126),
           mRNA
          Length = 1083

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 147 tttccctgggtcccctggca 166
           ||||||||||||||||||||
Sbjct: 846 tttccctgggtcccctggca 827
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>gb|AY553175.1| Odontotermes formosanus 16S ribosomal RNA gene, partial sequence;
           mitochondrial
          Length = 825

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 498 ttgcatatcttttgttttgt 517
           ||||||||||||||||||||
Sbjct: 739 ttgcatatcttttgttttgt 758
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>emb|BX822276.1|CNS0A5UY Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTFB25ZF10 of Flowers and buds of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1250

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                    
Query: 343  gaaacttctgcactgcacatagggcataccttatttattt 382
            ||||||||||||||||| || ||||| || || |||||||
Sbjct: 1121 gaaacttctgcactgcatatggggcaaactttgtttattt 1082
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>gb|AF262616.1|AF262616 Odontotermes formosanus 16S ribosomal RNA, partial sequence;
           mitochondrial gene for mitochondrial product
          Length = 828

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 498 ttgcatatcttttgttttgt 517
           ||||||||||||||||||||
Sbjct: 742 ttgcatatcttttgttttgt 761
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>gb|AC110619.3| Homo sapiens BAC clone RP11-649N20 from 2, complete sequence
          Length = 161830

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 147   tttccctgggtcccctggca 166
             ||||||||||||||||||||
Sbjct: 48429 tttccctgggtcccctggca 48448
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>gb|AC008273.2| Homo sapiens BAC clone RP11-150O2 from 2, complete sequence
          Length = 151297

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 494   catcttgcatatcttttgtt 513
             ||||||||||||||||||||
Sbjct: 56991 catcttgcatatcttttgtt 56972
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>gb|AE003524.5| Drosophila melanogaster chromosome 3L, section 61 of 83 of the
            complete sequence
          Length = 425677

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 498  ttgcatatcttttgttttgt 517
            ||||||||||||||||||||
Sbjct: 5325 ttgcatatcttttgttttgt 5344
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>gb|AC133102.4| Mus musculus BAC clone RP23-173H19 from 1, complete sequence
          Length = 199590

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 175    ctgtagaagcttctgctgcc 194
              ||||||||||||||||||||
Sbjct: 132568 ctgtagaagcttctgctgcc 132549
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>dbj|D89833.1| Odontotermes formosanus mitochondrial gene for 16S ribosomal RNA,
           partial sequence
          Length = 390

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 498 ttgcatatcttttgttttgt 517
           ||||||||||||||||||||
Sbjct: 118 ttgcatatcttttgttttgt 99


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,473,736
Number of Sequences: 3902068
Number of extensions: 5473736
Number of successful extensions: 96285
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 96199
Number of HSP's gapped (non-prelim): 85
length of query: 526
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 503
effective length of database: 17,143,297,704
effective search space: 8623078745112
effective search space used: 8623078745112
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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