Clone Name | rbart49b07 |
---|---|
Clone Library Name | barley_pub |
>DFRA_DIACA (P51104) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR)| (Dihydrokaempferol 4-reductase) Length = 360 Score = 30.0 bits (66), Expect = 1.5 Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 1/56 (1%) Frame = -3 Query: 349 FPEYPIPTRCKDEVNPPKKGYKYTNQPLKDLGMKFTPVQEYLY-EAVNSLQEKGFI 185 +PEY +PT+ KD +++++ L DLG +F + +Y AV S + KG + Sbjct: 287 YPEYNVPTKFKD-YKEDMGQVQFSSKKLTDLGFEFKYGLKDMYTAAVESCRAKGLL 341
>CFI_VITVI (P51117) Chalcone--flavonone isomerase (EC 5.5.1.6) (Chalcone| isomerase) Length = 234 Score = 30.0 bits (66), Expect = 1.5 Identities = 21/74 (28%), Positives = 32/74 (43%) Frame = -3 Query: 319 KDEVNPPKKGYKYTNQPLKDLGMKFTPVQEYLYEAVNSLQEKGFIKKASGTKVLASRGGS 140 KDE PP +T+ PL L M F+ L E N++ E + +A ++ G S Sbjct: 142 KDETFPPGNSILFTHSPLGALTMSFSK-DGSLPEVGNAVIENKLLTEAVLESIIGKHGVS 200 Query: 139 PPQNSPAPMFMSKL 98 P +S+L Sbjct: 201 PEAKKSLAARLSEL 214
>SFR11_HUMAN (Q05519) Splicing factor arginine/serine-rich 11 (Arginine-rich 54| kDa nuclear protein) (p54) Length = 484 Score = 28.9 bits (63), Expect = 3.3 Identities = 14/27 (51%), Positives = 17/27 (62%) Frame = +2 Query: 98 KFRHKHGRR*ILRRRTPSTSKHLGARS 178 K RH R RRRTPS+S+H +RS Sbjct: 245 KRRHSRSRSRSRRRRTPSSSRHRRSRS 271
>VMSA_HBVDR (P03140) Major surface antigen precursor| Length = 399 Score = 28.5 bits (62), Expect = 4.3 Identities = 20/60 (33%), Positives = 24/60 (40%), Gaps = 10/60 (16%) Frame = +1 Query: 193 PFLAGNSQLHRG------IPAQG*TS----CLGP*EAGSCTCNPSLADSPRPCILWEWGT 342 P L G S G IPAQG + C G+CTC P + LWEW + Sbjct: 281 PLLPGTSTTSTGPCKTCTIPAQGTSMFPSCCCTKPSDGNCTCIPIPSSWAFARFLWEWAS 340
>GLNA_CLOSA (P10656) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia| ligase) Length = 443 Score = 28.5 bits (62), Expect = 4.3 Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 4/57 (7%) Frame = -3 Query: 319 KDEVNPPKKG----YKYTNQPLKDLGMKFTPVQEYLYEAVNSLQEKGFIKKASGTKV 161 K+ + PP + + T Q K+ G+ P LYEAVN ++E KKA G V Sbjct: 358 KNNLQPPAEVEANIFAMTEQERKENGIDNLP--NNLYEAVNYMKENELAKKALGDHV 412
>VMSA_HBVDN (P30019) Major surface antigen| Length = 226 Score = 28.5 bits (62), Expect = 4.3 Identities = 20/60 (33%), Positives = 24/60 (40%), Gaps = 10/60 (16%) Frame = +1 Query: 193 PFLAGNSQLHRG------IPAQG*TS----CLGP*EAGSCTCNPSLADSPRPCILWEWGT 342 P L G S G IPAQG + C G+CTC P + LWEW + Sbjct: 108 PLLPGTSTTSTGPCKTCTIPAQGTSMFPSCCCTKPSDGNCTCIPIPSSWAFARFLWEWAS 167
>CFI_ELAUM (O65333) Chalcone--flavonone isomerase (EC 5.5.1.6) (Chalcone| isomerase) Length = 256 Score = 28.1 bits (61), Expect = 5.6 Identities = 17/61 (27%), Positives = 27/61 (44%) Frame = -3 Query: 319 KDEVNPPKKGYKYTNQPLKDLGMKFTPVQEYLYEAVNSLQEKGFIKKASGTKVLASRGGS 140 KD+ PP +T PL L M F+ + E N++ E + +A ++ G S Sbjct: 143 KDQTFPPAASNLFTQSPLGSLTMSFSK-DGSIPEVGNAVLENKLLSEAVLESIIGKHGVS 201 Query: 139 P 137 P Sbjct: 202 P 202
>M3K4_MOUSE (O08648) Mitogen-activated protein kinase kinase kinase 4 (EC| 2.7.11.25) (MAPK/ERK kinase kinase 4) (MEK kinase 4) (MEKK 4) Length = 1597 Score = 28.1 bits (61), Expect = 5.6 Identities = 22/79 (27%), Positives = 37/79 (46%), Gaps = 6/79 (7%) Frame = -3 Query: 319 KDEVNPPKKGYKYTNQPLKDLGMKFTPVQEYLYEAVNSLQ------EKGFIKKASGTKVL 158 K+++N P + P KDLG V+EY Y+ ++ E+ K A + +L Sbjct: 107 KEKMNTPSQS------PHKDLGKGVETVEEYSYKQEKKIRATLRTTERDHKKNAQCSFML 160 Query: 157 ASRGGSPPQNSPAPMFMSK 101 S GS P+ S + ++K Sbjct: 161 DSVAGSLPKKSIPDVDLNK 179
>ABL1_MOUSE (P00520) Proto-oncogene tyrosine-protein kinase ABL1 (EC 2.7.10.2)| (p150) (c-ABL) (Abelson murine leukemia viral oncogene homolog 1) Length = 1123 Score = 27.7 bits (60), Expect = 7.3 Identities = 28/95 (29%), Positives = 37/95 (38%), Gaps = 1/95 (1%) Frame = -3 Query: 337 PIPTRCKDEVNPPKKGYKYTNQPLKDLGMKFTPVQEYLYEAVNSLQEKGFIKKASGTKVL 158 P P K ++G+K T TP + L V + G K TK Sbjct: 781 PPPRLVKKNEEAAEEGFKDTESSPGSSPPSLTP--KLLRRQVTASPSSGLSHKEEATKGS 838 Query: 157 ASRGGSPPQNSPAPMFMSKL**ASAQSNN-AVRRH 56 AS G+P PAP +K+ + A S VRRH Sbjct: 839 ASGMGTPATAEPAPP-SNKVGLSKASSEEMRVRRH 872
>GRPE_THEVO (Q97BG7) Protein grpE (HSP-70 cofactor)| Length = 176 Score = 27.3 bits (59), Expect = 9.5 Identities = 18/37 (48%), Positives = 21/37 (56%), Gaps = 2/37 (5%) Frame = -3 Query: 286 KYTNQPLKDLGMKFTPVQEYLYEAVNSLQ--EKGFIK 182 KY QP+K G KF P YL+EA+ Q E G IK Sbjct: 119 KYGLQPIKAEGEKFDP---YLHEAIGMTQDGEDGKIK 152
>VMSA_HPBGS (P03144) Major surface antigen precursor| Length = 428 Score = 27.3 bits (59), Expect = 9.5 Identities = 13/28 (46%), Positives = 15/28 (53%) Frame = +1 Query: 253 CLGP*EAGSCTCNPSLADSPRPCILWEW 336 CL P AG+CTC P + LWEW Sbjct: 341 CLKP-TAGNCTCWPIPSSWALGSYLWEW 367
>H1_LYCES (P37218) Histone H1| Length = 287 Score = 27.3 bits (59), Expect = 9.5 Identities = 22/81 (27%), Positives = 33/81 (40%), Gaps = 9/81 (11%) Frame = -3 Query: 343 EYPIPTRCKDEVNPPKKGYK-----YTNQPLKDLGMKFTPVQ----EYLYEAVNSLQEKG 191 E P KDE NPP K K +P TP E + +A+ +L+E+ Sbjct: 15 EQAAPETVKDEANPPAKSGKAKKETKAKKPAAPRKRSATPTHPPYFEMIKDAIVTLKERT 74 Query: 190 FIKKASGTKVLASRGGSPPQN 128 + + TK + + S P N Sbjct: 75 GSSQHAITKFIEEKQKSLPSN 95
>VMSA_HBVAR (P31869) Major surface antigen| Length = 226 Score = 27.3 bits (59), Expect = 9.5 Identities = 21/61 (34%), Positives = 26/61 (42%), Gaps = 11/61 (18%) Frame = +1 Query: 193 PFLAGNSQLHRG------IPAQG*TS-----CLGP*EAGSCTCNPSLADSPRPCILWEWG 339 P L G S G IPAQG + C P +A +CTC P + LWEW Sbjct: 108 PLLPGTSTTSTGPCKTCTIPAQGTSMFPSCCCTKPSDA-NCTCIPIPSSWAFARFLWEWA 166 Query: 340 T 342 + Sbjct: 167 S 167
>ANFB_CANFA (P16859) Natriuretic peptides B precursor [Contains: Gamma-brain| natriuretic peptide; Brain natriuretic peptide 34 (BNP-34); Brain natriuretic peptide 29 (BNP-29)] Length = 140 Score = 27.3 bits (59), Expect = 9.5 Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 4/39 (10%) Frame = -1 Query: 192 GSLRRLLAPRCLLVEGVRRLR----IHRRPCLCRNFDRL 88 G+ R +LAP +++ +RRLR +H+ C R DR+ Sbjct: 88 GTPRGVLAPHDSVLQALRRLRSPKMMHKSGCFGRRLDRI 126 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 53,471,476 Number of Sequences: 219361 Number of extensions: 1107955 Number of successful extensions: 2468 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 2421 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2468 length of database: 80,573,946 effective HSP length: 92 effective length of database: 60,392,734 effective search space used: 1449425616 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)