>MANB_BACSU (P55278) Mannan endo-1,4-beta-mannosidase precursor (EC 3.2.1.78)|
           (Beta-mannanase) (1,4-beta-D-mannan mannanohydrolase)
          Length = 360

 Score = 31.6 bits (70), Expect = 0.81
 Identities = 33/124 (26%), Positives = 53/124 (42%), Gaps = 3/124 (2%)
 Frame = +3

Query: 6   LCLCMVGSDSPLLDHTTYPHHLLSPDQPVYTVE-LPWLSLKKNDRPRTEPSVSQDQNGF* 182
           + L ++G+ SP+  HT YP   ++P+    T + + WL+   N   R+E  V     G  
Sbjct: 11  IVLLLLGAASPISAHTVYP---VNPNAQQTTKDIMNWLAHLPN---RSENRVMSGAFG-- 62

Query: 183 RQEGESNLIPTGASIAQRHTISAMVNHHRPNKNGLGPA--GCRHARGHLLTEPWGSALDH 356
              G S++           T S    +   N  G  PA  GC + RG L T      +D+
Sbjct: 63  ---GYSDV-----------TFSMTEENRLKNATGQSPAIYGCDYGRGWLETADITDTIDY 108

Query: 357 SCHT 368
            C++
Sbjct: 109 CCNS 112

>KAD7_MACFA (Q95JP6) Putative adenylate kinase 7 (EC 2.7.4.3) (Fragment)|
          Length = 533

 Score = 31.6 bits (70), Expect = 0.81
 Identities = 15/43 (34%), Positives = 25/43 (58%)
 Frame = +3

Query: 12  LCMVGSDSPLLDHTTYPHHLLSPDQPVYTVELPWLSLKKNDRP 140
           L + G    ++DHT  PH+L++ D+ V+T+E     + KN  P
Sbjct: 66  LDLAGVIQNVIDHTPKPHYLVAVDESVHTLEDIVKCISKNTGP 108

>ETR2_DEBHA (Q6BV30) Probable trans-2-enoyl-CoA reductase 2, mitochondrial|
           precursor (EC 1.3.1.38)
          Length = 387

 Score = 30.4 bits (67), Expect = 1.8
 Identities = 17/49 (34%), Positives = 26/49 (53%)
 Frame = +2

Query: 59  PTSSAITRSTSLYCGAALVITQEE*PSKDRAISITGSKWILETRGRIQL 205
           P    + ++ +  CGA  VIT+E+  SK+    I    W+ ET G I+L
Sbjct: 225 PDLQDLIKNMTEECGATKVITEEQNASKEFGSEI--KSWVKETGGEIKL 271

>CYAA_USTMA (P49606) Adenylate cyclase (EC 4.6.1.1) (ATP pyrophosphate-lyase)|
            (Adenylyl cyclase)
          Length = 2493

 Score = 30.0 bits (66), Expect = 2.4
 Identities = 15/53 (28%), Positives = 26/53 (49%)
 Frame = +3

Query: 108  PWLSLKKNDRPRTEPSVSQDQNGF*RQEGESNLIPTGASIAQRHTISAMVNHH 266
            P +   K++  R++PS   D NG    +G    +P  +  A+R  + AM+  H
Sbjct: 2346 PGIFAAKDEADRSQPSTPLDDNGRNPIDGHGTAVPLLSHQARRKGVEAMLTMH 2398

>TTBK2_HUMAN (Q6IQ55) Tau-tubulin kinase 2 (EC 2.7.11.1)|
          Length = 1244

 Score = 30.0 bits (66), Expect = 2.4
 Identities = 30/106 (28%), Positives = 43/106 (40%), Gaps = 10/106 (9%)
 Frame = +3

Query: 60   PHHLLSPDQ-PVYTVELPWLSLKKNDRPRTEPSVSQ-------DQNGF*RQEGESNLIPT 215
            PH+  +P + PV     P  S + +  PRT  S          DQ       G S   P+
Sbjct: 1134 PHNPKTPPKSPVVPRRSPSASPRSSSLPRTSSSSPSRAGRPHHDQRSSSPHLGRSKSPPS 1193

Query: 216  --GASIAQRHTISAMVNHHRPNKNGLGPAGCRHARGHLLTEPWGSA 347
              G+S ++R   S    H +P+KNGL  +G  H        P G +
Sbjct: 1194 HSGSSSSRR---SCQQEHCKPSKNGLKGSGSLHHHSASTKTPQGKS 1236

>KAD7_HUMAN (Q96M32) Putative adenylate kinase 7 (EC 2.7.4.3)|
          Length = 723

 Score = 29.6 bits (65), Expect = 3.1
 Identities = 14/43 (32%), Positives = 24/43 (55%)
 Frame = +3

Query: 12  LCMVGSDSPLLDHTTYPHHLLSPDQPVYTVELPWLSLKKNDRP 140
           L + G    ++DH   PH+L++ D+ V+T+E     + KN  P
Sbjct: 256 LDLAGVIQNVIDHVPKPHYLVAVDESVHTLEDIVKCISKNTGP 298

>SF3B1_XENLA (O57683) Splicing factor 3B subunit 1 (Spliceosome-associated protein|
            155) (SAP 155) (SF3b155) (Pre-mRNA-splicing factor SF3b
            155 kDa subunit) (146 kDa nuclear protein)
          Length = 1307

 Score = 29.6 bits (65), Expect = 3.1
 Identities = 16/53 (30%), Positives = 23/53 (43%)
 Frame = +3

Query: 225  IAQRHTISAMVNHHRPNKNGLGPAGCRHARGHLLTEPWGSALDHSCHTLHIVL 383
            +  R T SA+V H      G G   C  +  HLL   W +  + S H +  V+
Sbjct: 1185 LVHRQTASAVVQHMSLGVYGFG---CEDSLNHLLNYVWPNVFETSPHVIQAVM 1234

>NQRC_CHLMU (Q9PKB5) Probable Na(+)-translocating NADH-quinone reductase|
           subunit C (EC 1.6.5.-) (Na(+)-translocating NQR subunit
           C) (Na(+)-NQR subunit C) (NQR complex subunit C) (NQR-1
           subunit C)
          Length = 318

 Score = 29.6 bits (65), Expect = 3.1
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = +3

Query: 324 LTEPWGSALDHSCHTLHIVLANGES 398
           L+ P  S  DHS H ++ +LAN ES
Sbjct: 134 LSHPTSSVQDHSLHVIYAILANDES 158

>SF3B1_MOUSE (Q99NB9) Splicing factor 3B subunit 1 (Spliceosome-associated protein|
            155) (SAP 155) (SF3b155) (Pre-mRNA-splicing factor SF3b
            155 kDa subunit)
          Length = 1304

 Score = 29.6 bits (65), Expect = 3.1
 Identities = 16/53 (30%), Positives = 23/53 (43%)
 Frame = +3

Query: 225  IAQRHTISAMVNHHRPNKNGLGPAGCRHARGHLLTEPWGSALDHSCHTLHIVL 383
            +  R T SA+V H      G G   C  +  HLL   W +  + S H +  V+
Sbjct: 1182 LVHRQTASAVVQHMSLGVYGFG---CEDSLNHLLNYVWPNVFETSPHVIQAVM 1231

>SF3B1_HUMAN (O75533) Splicing factor 3B subunit 1 (Spliceosome-associated protein|
            155) (SAP 155) (SF3b155) (Pre-mRNA-splicing factor SF3b
            155 kDa subunit)
          Length = 1304

 Score = 29.6 bits (65), Expect = 3.1
 Identities = 16/53 (30%), Positives = 23/53 (43%)
 Frame = +3

Query: 225  IAQRHTISAMVNHHRPNKNGLGPAGCRHARGHLLTEPWGSALDHSCHTLHIVL 383
            +  R T SA+V H      G G   C  +  HLL   W +  + S H +  V+
Sbjct: 1182 LVHRQTASAVVQHMSLGVYGFG---CEDSLNHLLNYVWPNVFETSPHVIQAVM 1231

>RNAS2_HUMAN (P10153) Nonsecretory ribonuclease precursor (EC 3.1.27.5)|
           (Ribonuclease US) (Eosinophil-derived neurotoxin) (RNase
           UpI-2) (Ribonuclease 2) (RNase 2)
          Length = 161

 Score = 29.3 bits (64), Expect = 4.0
 Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 6/57 (10%)
 Frame = +1

Query: 70  CYHQINQFILWSC------PGYHSRRMTVQGQSHQYHRIKMDSRDKRENPT*YPQVP 222
           C+H  +Q  L  C      P   S     Q  ++ ++ +  D+RD+R +P  YP VP
Sbjct: 98  CHHSGSQVPLIHCNLTTPSPQNISNCRYAQTPANMFYIVACDNRDQRRDPPQYPVVP 154

>RNAS2_GORGO (P47782) Nonsecretory ribonuclease precursor (EC 3.1.27.5)|
           (Ribonuclease US) (Eosinophil-derived neurotoxin) (RNase
           UpI-2) (Ribonuclease 2) (RNase 2)
          Length = 161

 Score = 29.3 bits (64), Expect = 4.0
 Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 6/57 (10%)
 Frame = +1

Query: 70  CYHQINQFILWSC------PGYHSRRMTVQGQSHQYHRIKMDSRDKRENPT*YPQVP 222
           C+H  +Q  L  C      P   S     Q  ++ ++ +  D+RD+R +P  YP VP
Sbjct: 98  CHHSGSQVPLIHCNLTTPSPQNISNCRYAQTPANMFYIVACDNRDQRRDPPQYPVVP 154

>LUXS_THET2 (Q72IE6) S-ribosylhomocysteine lyase (EC 4.4.1.21) (Autoinducer-2|
           production protein luxS) (AI-2 synthesis protein)
          Length = 155

 Score = 28.9 bits (63), Expect = 5.3
 Identities = 12/33 (36%), Positives = 16/33 (48%)
 Frame = +3

Query: 207 IPTGASIAQRHTISAMVNHHRPNKNGLGPAGCR 305
           +PTGA     H ++  +  H P    L P GCR
Sbjct: 47  LPTGALHTLEHLLAGYLRDHLPGVIDLSPMGCR 79

>SMD3_DROME (O44437) Small nuclear ribonucleoprotein SM D3 (snRNP core protein|
           D3) (SM-D3)
          Length = 151

 Score = 28.9 bits (63), Expect = 5.3
 Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
 Frame = -1

Query: 341 APRFRQQMSAGMS-TAGRA*SILVRAMMIDHG*NSVPLSNRGTCG 210
           AP F++Q   G+  TAGR  + ++RA     G    P   RGT G
Sbjct: 80  APMFKKQTGKGLGGTAGRGKAAILRAQARGRGRGGPPGGGRGTGG 124

>TILS_ENTFA (Q839B3) tRNA(Ile)-lysidine synthase (EC 6.3.4.-)|
           (tRNA(Ile)-lysidine synthetase)
           (tRNA(Ile)-2-lysyl-cytidine synthase)
          Length = 462

 Score = 28.9 bits (63), Expect = 5.3
 Identities = 15/43 (34%), Positives = 20/43 (46%)
 Frame = +3

Query: 12  LCMVGSDSPLLDHTTYPHHLLSPDQPVYTVELPWLSLKKNDRP 140
           LC+    + L +  T   HLL P   +Y  E  WL L   D+P
Sbjct: 320 LCLEQKQAALREEVT---HLLVPGAGIYLSETEWLGLIATDKP 359

>YR802_MIMIV (Q5UR60) Hypothetical protein R802|
          Length = 247

 Score = 28.1 bits (61), Expect = 9.0
 Identities = 13/40 (32%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
 Frame = +3

Query: 18  MVGSDSPLLDHTTYPHHLLSPDQ---PVYTVELPWLSLKK 128
           +V ++  L++H T PH+L +  +   P   +ELP L++ K
Sbjct: 113 IVDAEKSLIEHGTTPHYLSADTKYTFPTLKIELPQLNVNK 152

>POLN_SOUV3 (Q04544) Non-structural polyprotein [Contains: p48; Helicase|
           (2C-like protein) (P2C); 3A-like protein; Viral
           genome-linked protein (VPg); Thiol protease P3C (EC
           3.4.22.-) (3C-like protease) (3C-pro); RNA-directed RNA
           polymerase (EC 2.7.7.48)]
          Length = 1788

 Score = 28.1 bits (61), Expect = 9.0
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +1

Query: 10  VCAWWAQIRLCSIIQPTHIICYHQINQ 90
           + AWW   R+C I QP H + Y Q+ +
Sbjct: 237 IAAWW---RVCYIPQPKHRLSYDQLKE 260

>YHCH_BACSU (P54592) Hypothetical ABC transporter ATP-binding protein yhcH|
          Length = 305

 Score = 28.1 bits (61), Expect = 9.0
 Identities = 17/33 (51%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
 Frame = +3

Query: 279 NGLGPAGCRHARGHL--LTEPWGSALDHSCHTL 371
           NGL PAG R  R HL  LT   G A+  S H L
Sbjct: 161 NGLDPAGIREIRDHLKKLTRERGMAVIVSSHLL 193


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 68,121,540
Number of Sequences: 219361
Number of extensions: 1448676
Number of successful extensions: 3647
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 3547
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3647
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2336739400
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)