>SPIKE_CVHSA (P59594) Spike glycoprotein precursor (Peplomer protein) (E2)|
           [Contains: Spike protein S1; Spike protein S2]
          Length = 1255

 Score = 28.5 bits (62), Expect = 4.9
 Identities = 14/39 (35%), Positives = 23/39 (58%)
 Frame = +3

Query: 99  KCFLPMPTATSANYSTHSCHHTTARRPINASTRSAGADT 215
           +C +P+     A+Y T S   +T+++ I A T S GAD+
Sbjct: 647 ECDIPIGAGICASYHTVSLLRSTSQKSIVAYTMSLGADS 685


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.316    0.131    0.394 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,445,176
Number of Sequences: 219361
Number of extensions: 375322
Number of successful extensions: 995
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 984
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 994
length of database: 80,573,946
effective HSP length: 49
effective length of database: 69,825,257
effective search space used: 1675806168
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)