>FBXL7_HUMAN (Q9UJT9) F-box/LRR-repeat protein 7 (F-box and leucine-rich repeat|
           protein 7) (F-box protein FBL6/FBL7)
          Length = 491

 Score = 36.2 bits (82), Expect = 0.049
 Identities = 18/60 (30%), Positives = 29/60 (48%)
 Frame = -1

Query: 476 CRNLIDIRFRGCRGITGESLVSLLRHCGQTVEIVDISRCPAIKGASVELFAQRATRLNHL 297
           C  L  +  RGC GIT   +  L ++C + ++ +DI +CP +    +E  A     L  L
Sbjct: 375 CSKLRYLNARGCEGITDHGVEYLAKNCTK-LKSLDIGKCPLVSDTGLECLALNCFNLKRL 433

>YKK7_CAEEL (P34284) Hypothetical F-box/LRR-repeat protein C02F5.7|
          Length = 466

 Score = 35.4 bits (80), Expect = 0.084
 Identities = 19/64 (29%), Positives = 36/64 (56%)
 Frame = -1

Query: 488 MLSSCRNLIDIRFRGCRGITGESLVSLLRHCGQTVEIVDISRCPAIKGASVELFAQRATR 309
           +LS+C++L  +  RGC G+T     S+  H G  ++ +++ +C  +   +V+  A  AT 
Sbjct: 222 ILSNCKSLDTLILRGCEGLTENVFGSVEAHMG-AIKKLNLLQCFQLTDITVQNIANGATA 280

Query: 308 LNHL 297
           L +L
Sbjct: 281 LEYL 284

>FBXL2_HUMAN (Q9UKC9) F-box/LRR-repeat protein 2 (F-box and leucine-rich repeat|
           protein 2) (F-box protein FBL2/FBL3)
          Length = 423

 Score = 35.4 bits (80), Expect = 0.084
 Identities = 17/61 (27%), Positives = 34/61 (55%)
 Frame = -1

Query: 479 SCRNLIDIRFRGCRGITGESLVSLLRHCGQTVEIVDISRCPAIKGASVELFAQRATRLNH 300
           +CRN+  +   GC  IT  +  SL R C + ++ +D++ C +I  +S++  ++    L +
Sbjct: 102 NCRNIEHLNLNGCTKITDSTCYSLSRFCSK-LKHLDLTSCVSITNSSLKGISEGCRNLEY 160

Query: 299 L 297
           L
Sbjct: 161 L 161



 Score = 30.0 bits (66), Expect = 3.5
 Identities = 17/67 (25%), Positives = 30/67 (44%)
 Frame = -1

Query: 491 AMLSSCRNLIDIRFRGCRGITGESLVSLLRHCGQTVEIVDISRCPAIKGASVELFAQRAT 312
           A++  CR L  +  RGC  +  E+L  +  +C + V + ++  C  I    V    +   
Sbjct: 176 ALVRGCRGLKALLLRGCTQLEDEALKHIQNYCHELVSL-NLQSCSRITDEGVVQICRGCH 234

Query: 311 RLNHLVI 291
           RL  L +
Sbjct: 235 RLQALCL 241

>FBXL2_MOUSE (Q8BH16) F-box/LRR-repeat protein 2 (F-box and leucine-rich repeat|
           protein 2)
          Length = 423

 Score = 35.0 bits (79), Expect = 0.11
 Identities = 16/61 (26%), Positives = 34/61 (55%)
 Frame = -1

Query: 479 SCRNLIDIRFRGCRGITGESLVSLLRHCGQTVEIVDISRCPAIKGASVELFAQRATRLNH 300
           +CRN+  +   GC  IT  +  SL R C + ++ +D++ C ++  +S++  ++    L +
Sbjct: 102 NCRNIEHLNLNGCTKITDSTCYSLSRFCSK-LKHLDLTSCVSVTNSSLKGISEGCRNLEY 160

Query: 299 L 297
           L
Sbjct: 161 L 161



 Score = 32.0 bits (71), Expect = 0.93
 Identities = 18/67 (26%), Positives = 30/67 (44%)
 Frame = -1

Query: 491 AMLSSCRNLIDIRFRGCRGITGESLVSLLRHCGQTVEIVDISRCPAIKGASVELFAQRAT 312
           A++  CR L  +  RGC  +  E+L  +  HC + V + ++  C  I    V    +   
Sbjct: 176 ALVRGCRGLKALLLRGCTQLEDEALKHIQNHCHELVSL-NLQSCSRITDDGVVQICRGCH 234

Query: 311 RLNHLVI 291
           RL  L +
Sbjct: 235 RLQALCL 241

>YQOA_CAEEL (Q09299) Putative RNA-binding protein EEED8.10|
          Length = 738

 Score = 31.6 bits (70), Expect = 1.2
 Identities = 15/58 (25%), Positives = 29/58 (50%)
 Frame = -1

Query: 479 SCRNLIDIRFRGCRGITGESLVSLLRHCGQTVEIVDISRCPAIKGASVELFAQRATRL 306
           S  +L  + +RG      ++   LL++CG +++ VD+     + G S +LF  +   L
Sbjct: 365 SLSHLEQLSYRGMETTGDKAFYFLLKNCGHSLKFVDLRNSKRLHGRSFKLFGSQLESL 422

>FBXL6_HUMAN (Q8N531) F-box/LRR-repeat protein 6 (F-box and leucine-rich repeat|
           protein 6) (F-box protein FBL6) (FBL6A)
          Length = 539

 Score = 30.8 bits (68), Expect = 2.1
 Identities = 16/60 (26%), Positives = 28/60 (46%)
 Frame = -1

Query: 476 CRNLIDIRFRGCRGITGESLVSLLRHCGQTVEIVDISRCPAIKGASVELFAQRATRLNHL 297
           C  L  ++  GC G+T ++LV L + C Q +  +D+        A V    +  +R+  L
Sbjct: 219 CPRLTFLKLSGCHGVTADALVMLAKACCQ-LHSLDLQHSMVESTAVVSFLEEAGSRMRKL 277

>FXL20_HUMAN (Q96IG2) F-box/LRR-repeat protein 20 (F-box and leucine-rich repeat|
           protein 20) (F-box/LRR-repeat protein 2-like)
          Length = 436

 Score = 30.8 bits (68), Expect = 2.1
 Identities = 16/63 (25%), Positives = 31/63 (49%)
 Frame = -1

Query: 479 SCRNLIDIRFRGCRGITGESLVSLLRHCGQTVEIVDISRCPAIKGASVELFAQRATRLNH 300
           +CRN+  +   GC   T  +  SL + C + +  +D++ C +I   S++  ++    L  
Sbjct: 115 NCRNIEVLNLNGCTKTTDATCTSLSKFCSK-LRHLDLASCTSITNMSLKALSEGCPLLEQ 173

Query: 299 LVI 291
           L I
Sbjct: 174 LNI 176

>Y257_SYNY3 (P74415) Hypothetical UPF0079 protein sll0257|
          Length = 157

 Score = 30.8 bits (68), Expect = 2.1
 Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 4/64 (6%)
 Frame = +2

Query: 17  LLGTCTIAQFLLLNLHARQQEELFH-DKFRVNKTYIHTFPPEYYTQGKHFPYSTCSI--- 184
           + G      F ++N +   +  L+H D +R+N   +    PE Y QG+ FP    ++   
Sbjct: 56  ITGEIVSPTFTIVNEYREGKMPLYHLDLYRLNTLEVEYLYPEQYWQGEDFPLGITAVEWP 115

Query: 185 RRLP 196
            RLP
Sbjct: 116 ERLP 119

>JHD1A_XENTR (Q5U263) JmjC domain-containing histone demethylation protein 1A (EC|
            1.14.11.-) (F-box/LRR-repeat protein 11) (F-box and
            leucine-rich repeat protein 11)
          Length = 1146

 Score = 30.4 bits (67), Expect = 2.7
 Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
 Frame = -1

Query: 491  AMLSSCRN-LIDIRFRGCRGITGESLVSLLRHCGQTVEIVDISRCPAIKGASVELF 327
            A+ SS R  L  I   GC+G+T ESL+ L R     + ++D+  C  +   + E F
Sbjct: 1071 AVGSSTRGTLTHIHLAGCKGVTDESLLYLRR--ATNLSLIDLHGCKQVTRGACEEF 1124

>FXL20_RAT (Q9QZH7) F-box/LRR-repeat protein 20 (F-box and leucine-rich repeat|
           protein 20) (F-box/LRR-repeat protein 2-like)
          Length = 276

 Score = 30.4 bits (67), Expect = 2.7
 Identities = 16/63 (25%), Positives = 31/63 (49%)
 Frame = -1

Query: 479 SCRNLIDIRFRGCRGITGESLVSLLRHCGQTVEIVDISRCPAIKGASVELFAQRATRLNH 300
           +CRN+  +   GC   T  +  SL + C + +  +D++ C +I   S++  ++    L  
Sbjct: 115 NCRNIEVLSLNGCTKTTDATCTSLSKFCSK-LRHLDLASCTSITNMSLKALSEGCPLLEQ 173

Query: 299 LVI 291
           L I
Sbjct: 174 LNI 176

>FXL20_MOUSE (Q9CZV8) F-box/LRR-repeat protein 20 (F-box and leucine-rich repeat|
           protein 20) (F-box/LRR-repeat protein 2-like)
          Length = 436

 Score = 30.4 bits (67), Expect = 2.7
 Identities = 16/63 (25%), Positives = 31/63 (49%)
 Frame = -1

Query: 479 SCRNLIDIRFRGCRGITGESLVSLLRHCGQTVEIVDISRCPAIKGASVELFAQRATRLNH 300
           +CRN+  +   GC   T  +  SL + C + +  +D++ C +I   S++  ++    L  
Sbjct: 115 NCRNIEVLSLNGCTKTTDATCTSLSKFCSK-LRHLDLASCTSITNMSLKALSEGCPLLEQ 173

Query: 299 LVI 291
           L I
Sbjct: 174 LNI 176

>FXL16_RAT (Q5MJ12) F-box/LRR-repeat protein 16 (F-box and leucine-rich repeat|
           protein 16) (Spinal cord injury and regeneration-related
           protein 1)
          Length = 479

 Score = 30.0 bits (66), Expect = 3.5
 Identities = 19/66 (28%), Positives = 32/66 (48%)
 Frame = -1

Query: 488 MLSSCRNLIDIRFRGCRGITGESLVSLLRHCGQTVEIVDISRCPAIKGASVELFAQRATR 309
           ++ S  NL  +   GC  +T +  V L+    + +  +D+S CP I   ++E  A    R
Sbjct: 315 VVHSLPNLTSLSLSGCSKVTDDG-VELVAENLRKLRSLDLSWCPRITDMALEYVACDLHR 373

Query: 308 LNHLVI 291
           L  LV+
Sbjct: 374 LEELVL 379

>SP3_MOUSE (O70494) Transcription factor Sp3|
          Length = 783

 Score = 29.6 bits (65), Expect = 4.6
 Identities = 14/32 (43%), Positives = 19/32 (59%)
 Frame = +3

Query: 72  SKRSFFMTSSELTRHTYTHSHQSIIHKENTFL 167
           SKR  FM S  L +H  TH ++ +IH  +T L
Sbjct: 689 SKR--FMRSDHLAKHIKTHQNKKVIHSSSTVL 718

>FXL17_HUMAN (Q9UF56) F-box/LRR-repeat protein 17 (F-box and leucine-rich repeat|
           protein 17) (F-box only protein 13) (Fragment)
          Length = 370

 Score = 29.3 bits (64), Expect = 6.0
 Identities = 18/59 (30%), Positives = 31/59 (52%)
 Frame = -1

Query: 473 RNLIDIRFRGCRGITGESLVSLLRHCGQTVEIVDISRCPAIKGASVELFAQRATRLNHL 297
           +NL ++    C+ IT  +L+++ R+   T+E VD+  C  I      L AQ +  L +L
Sbjct: 261 QNLKELYLVSCK-ITDYALIAIGRY-SMTIETVDVGWCKEITDQGATLIAQSSKSLRYL 317

>FXL16_HUMAN (Q8N461) F-box/LRR-repeat protein 16 (F-box and leucine-rich repeat|
           protein 16)
          Length = 479

 Score = 29.3 bits (64), Expect = 6.0
 Identities = 19/66 (28%), Positives = 32/66 (48%)
 Frame = -1

Query: 488 MLSSCRNLIDIRFRGCRGITGESLVSLLRHCGQTVEIVDISRCPAIKGASVELFAQRATR 309
           ++ S  NL  +   GC  +T +  V L+    + +  +D+S CP I   ++E  A    R
Sbjct: 315 VVHSLPNLTALSLSGCSKVTDDG-VELVAENLRKLRSLDLSWCPRITDMALEYVACDLHR 373

Query: 308 LNHLVI 291
           L  LV+
Sbjct: 374 LEELVL 379


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 74,614,015
Number of Sequences: 219361
Number of extensions: 1575761
Number of successful extensions: 4233
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 4090
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4230
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3478785780
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)