ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart49b01
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1REPS1_HUMAN (Q96D71) RalBP1-associated Eps domain-containing pro... 30 3.1
2ATS14_HUMAN (Q8WXS8) ADAMTS-14 precursor (EC 3.4.24.-) (A disint... 28 6.9
3NADAP_HUMAN (Q9BWU0) Kanadaptin (Kidney anion exchanger adapter ... 28 6.9
4ABCI_SCHPO (Q92338) Protein ABC1 homolog, mitochondrial precursor 28 9.0
5ANK2_HUMAN (Q01484) Ankyrin-2 (Brain ankyrin) (Ankyrin-B) (Ankyr... 28 9.0

>REPS1_HUMAN (Q96D71) RalBP1-associated Eps domain-containing protein 1|
           (RalBP1-interacting protein 1)
          Length = 744

 Score = 29.6 bits (65), Expect = 3.1
 Identities = 18/48 (37%), Positives = 27/48 (56%)
 Frame = +2

Query: 191 QIFIHASQNMNLSRKDISRGHPSLLPALSSGLHASLPASSSRNRRSDA 334
           Q  + A+ N+N  + D +  HP +LPA      AS PASS R  ++D+
Sbjct: 580 QFEVFAASNVNDEQDDEAEKHPEVLPAEK----ASDPASSLRVAKTDS 623



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>ATS14_HUMAN (Q8WXS8) ADAMTS-14 precursor (EC 3.4.24.-) (A disintegrin and|
            metalloproteinase with thrombospondin motifs 14) (ADAM-TS
            14) (ADAM-TS14)
          Length = 1223

 Score = 28.5 bits (62), Expect = 6.9
 Identities = 19/52 (36%), Positives = 25/52 (48%)
 Frame = +2

Query: 242  SRGHPSLLPALSSGLHASLPASSSRNRRSDATLHSNRCPCCIPSTITTSNWS 397
            +RG   LLP LS+G H  +PA +    R +A     R PC  P+      WS
Sbjct: 930  TRGIQCLLP-LSNGTHKVMPAKACAGDRPEARRPCLRVPC--PAQWRLGAWS 978



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>NADAP_HUMAN (Q9BWU0) Kanadaptin (Kidney anion exchanger adapter protein)|
           (Solute carrier family 4 anion exchanger member 1
           adapter protein) (Lung cancer oncogene 3 protein)
          Length = 796

 Score = 28.5 bits (62), Expect = 6.9
 Identities = 17/51 (33%), Positives = 26/51 (50%)
 Frame = +2

Query: 167 RYSRLHRYQIFIHASQNMNLSRKDISRGHPSLLPALSSGLHASLPASSSRN 319
           R S+LHR ++    SQ+  L+ +D+S         +S    +  PASSS N
Sbjct: 46  RISKLHRLRMADILSQSETLASQDLSGDFKKPALPVSPAARSKAPASSSSN 96



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>ABCI_SCHPO (Q92338) Protein ABC1 homolog, mitochondrial precursor|
          Length = 610

 Score = 28.1 bits (61), Expect = 9.0
 Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
 Frame = +2

Query: 227 SRKDISRGHPSLLPALSSGLHASLPASSSRNRRSDATLHSNRCPCCIPSTITTSNWS--F 400
           S KD+++ HP+     ++   +S+  S S   +S   L S++ P        +S WS  +
Sbjct: 137 SIKDVTKSHPATNANFTADFESSIEESYSTENKSPVILSSSKVP--------SSQWSRLW 188

Query: 401 SHRPLATS 424
            +  LATS
Sbjct: 189 HYGGLATS 196



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>ANK2_HUMAN (Q01484) Ankyrin-2 (Brain ankyrin) (Ankyrin-B) (Ankyrin,|
            nonerythroid)
          Length = 3924

 Score = 28.1 bits (61), Expect = 9.0
 Identities = 25/84 (29%), Positives = 37/84 (44%), Gaps = 4/84 (4%)
 Frame = +2

Query: 185  RYQIFIHASQNMNLSRKDISRGHPSLLPALSSGLHASLPASSSRNRRSDATLHSN----R 352
            R ++ I      ++ +K   R HP+  P+L S  HA  P S S      +TL S+    R
Sbjct: 1751 RSKLPIRVKGKEDVPKKTTHRPHPAASPSLKSERHA--PGSPSPKTERHSTLSSSAKTER 1808

Query: 353  CPCCIPSTITTSNWSFSHRPLATS 424
             P   PS+ T       H P++ S
Sbjct: 1809 HPPVSPSSKTE-----KHSPVSPS 1827


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 47,000,230
Number of Sequences: 219361
Number of extensions: 734838
Number of successful extensions: 1810
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1789
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1810
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2336739400
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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