Clone Name | rbart49a10 |
---|---|
Clone Library Name | barley_pub |
>gb|AC125446.12| Mus musculus chromosome 14, clone RP24-501J23, complete sequence Length = 159722 Score = 42.1 bits (21), Expect = 0.29 Identities = 21/21 (100%) Strand = Plus / Plus Query: 24 ggctcatcaactgtgatttga 44 ||||||||||||||||||||| Sbjct: 140859 ggctcatcaactgtgatttga 140879
>gb|BC014733.1| Mus musculus yes-associated protein 1, mRNA (cDNA clone MGC:25351 IMAGE:4239820), complete cds Length = 2569 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 84 aaagcggaacaacgatgga 102 ||||||||||||||||||| Sbjct: 1808 aaagcggaacaacgatgga 1790
>gb|BC039125.1| Mus musculus yes-associated protein 1, mRNA (cDNA clone MGC:11516 IMAGE:2649070), complete cds Length = 3989 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 84 aaagcggaacaacgatgga 102 ||||||||||||||||||| Sbjct: 1618 aaagcggaacaacgatgga 1600
>gb|AC139885.3| Mus musculus BAC clone RP23-349N15 from chromosome 9, complete sequence Length = 207340 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 84 aaagcggaacaacgatgga 102 ||||||||||||||||||| Sbjct: 118858 aaagcggaacaacgatgga 118840
>gb|AC011899.5| Homo sapiens BAC clone RP11-452C13 from 7, complete sequence Length = 214229 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 21 gtgggctcatcaactgtga 39 ||||||||||||||||||| Sbjct: 101296 gtgggctcatcaactgtga 101314
>emb|AL035460.15|HS860F19 Human DNA sequence from clone RP5-860F19 on chromosome 20p12.3-13 Contains the gene for a novel protein (KIAA1442), the RPL19P1 gene for ribosomal protein L19 pseudogene 1, the CPX-1 gene for metallocarboxypeptidase, the C20orf141 gene, a novel gene and four CpG islands, complete sequence Length = 135005 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 26 ctcatcaactgtgatttga 44 ||||||||||||||||||| Sbjct: 71693 ctcatcaactgtgatttga 71675
>emb|X80508.1|MMYAP65 M.musculus YAP65 mRNA Length = 4125 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 84 aaagcggaacaacgatgga 102 ||||||||||||||||||| Sbjct: 1755 aaagcggaacaacgatgga 1737
>ref|NM_009534.1| Mus musculus yes-associated protein 1 (Yap1), mRNA Length = 4125 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 84 aaagcggaacaacgatgga 102 ||||||||||||||||||| Sbjct: 1755 aaagcggaacaacgatgga 1737
>dbj|AK160543.1| Mus musculus ES cells cDNA, RIKEN full-length enriched library, clone:2410021C09 product:yes-associated protein, full insert sequence Length = 906 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 84 aaagcggaacaacgatgga 102 ||||||||||||||||||| Sbjct: 467 aaagcggaacaacgatgga 449
>gb|AC022302.7|AC022302 Homo sapiens chromosome 15 clone CTD-2019H15 map 15q21.2, complete sequence Length = 176872 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 27 tcatcaactgtgatttgat 45 ||||||||||||||||||| Sbjct: 42796 tcatcaactgtgatttgat 42778
>gb|BC094313.1| Mus musculus yes-associated protein 1, mRNA (cDNA clone MGC:106687 IMAGE:5697882), complete cds Length = 4137 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 84 aaagcggaacaacgatgga 102 ||||||||||||||||||| Sbjct: 1751 aaagcggaacaacgatgga 1733
>emb|AL772301.7| Mouse DNA sequence from clone RP23-111F12 on chromosome 2, complete sequence Length = 187665 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 34 ctgtgatttgatctaggct 52 ||||||||||||||||||| Sbjct: 116296 ctgtgatttgatctaggct 116314
>emb|CT030639.8| Mouse DNA sequence from clone RP24-318P17 on chromosome 9, complete sequence Length = 198178 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 84 aaagcggaacaacgatgga 102 ||||||||||||||||||| Sbjct: 18819 aaagcggaacaacgatgga 18801 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 813,191 Number of Sequences: 3902068 Number of extensions: 813191 Number of successful extensions: 51095 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 13 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 51078 Number of HSP's gapped (non-prelim): 17 length of query: 103 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 82 effective length of database: 17,151,101,840 effective search space: 1406390350880 effective search space used: 1406390350880 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)