>YEIN_ECOLI (P33025) Hypothetical protein yeiN|
          Length = 312

 Score = 69.7 bits (169), Expect = 3e-12
 Identities = 35/73 (47%), Positives = 51/73 (69%)
 Frame = -3

Query: 464 LIAVPVPKQHAASGKVIESAIQQSLQEADAKKIIGNTITPFILDRVKVLTGGSSLEANIA 285
           ++A P+P+Q A     I +AI Q++ EA+A+ +IG   TPF+L RV  LTGG SL++NI 
Sbjct: 232 VVANPIPEQFAMPEHTINAAIDQAVAEAEAQGVIGKESTPFLLARVAELTGGDSLKSNIQ 291

Query: 284 LVKNNALTGAKIA 246
           LV NNA+  ++IA
Sbjct: 292 LVFNNAILASEIA 304

>Y440_MYCPN (P75338) Hypothetical protein MPN440 (H08_orf726)|
          Length = 726

 Score = 32.7 bits (73), Expect = 0.47
 Identities = 15/38 (39%), Positives = 24/38 (63%)
 Frame = -3

Query: 440 QHAASGKVIESAIQQSLQEADAKKIIGNTITPFILDRV 327
           Q A   ++ ++++QQ   +AD KKIIG T    +LDR+
Sbjct: 534 QQAILDQITKTSLQQYGSQADLKKIIGETKNQLLLDRI 571

>YCF27_GALSU (P28257) Probable transcriptional regulator ycf27 (OmpR-like|
           protein)
          Length = 255

 Score = 28.9 bits (63), Expect = 6.8
 Identities = 15/30 (50%), Positives = 17/30 (56%), Gaps = 5/30 (16%)
 Frame = -2

Query: 192 SAIMLLLKEHVKL-----MMPTVDGTGCCQ 118
           SA+ L  KEH  L     MMP +DG G CQ
Sbjct: 42  SALFLFHKEHPNLVVLDVMMPKIDGYGVCQ 71

>IRF2_MOUSE (P23906) Interferon regulatory factor 2 (IRF-2)|
          Length = 349

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 18/46 (39%), Positives = 24/46 (52%)
 Frame = +2

Query: 62  SKNGMRKPDDSRCARNWYIWQHPVPSTVGIINFTCSFSRSIIALTS 199
           SK G +KP   +  R  +I Q PV S++G+ N    FS     LTS
Sbjct: 119 SKKG-KKPKTEKEERVKHIKQEPVESSLGLSNGVSGFSPEYAVLTS 163


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 66,545,477
Number of Sequences: 219361
Number of extensions: 1314290
Number of successful extensions: 3367
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3285
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3367
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 3026354448
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)