ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart49a05
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1DBNBT_TAXCA (Q8LL69) 3'-N-debenzoyl-2'-deoxytaxol N-benzoyltrans... 39 0.008
2T5AT_TAXCH (Q8S9G6) Taxadien-5-alpha-ol O-acetyltransferase (EC ... 35 0.088
3T5AT_TAXCU (Q9M6F0) Taxadien-5-alpha-ol O-acetyltransferase (EC ... 34 0.20
4DEOB_BUCBP (Q89A57) Phosphopentomutase (EC 5.4.2.7) (Phosphodeox... 30 2.8
5DBAT_TAXCU (Q9M6E2) 10-deacetylbaccatin III 10-O-acetyltransfera... 30 2.8
6SALAT_PAPSO (Q94FT4) Salutaridinol 7-O-acetyltransferase (EC 2.3... 30 3.7
7PAP_CANAL (O42617) Poly(A) polymerase PAPalpha (EC 2.7.7.19) (Po... 29 4.8
8PT127_YEAST (P32606) Putative mitochondrial translation system c... 29 4.8
9VATF_MANSE (P31478) Vacuolar ATP synthase subunit F (EC 3.6.3.14... 28 8.2
10TRPB2_METMA (Q8Q001) Tryptophan synthase beta chain 2 (EC 4.2.1.20) 28 8.2

>DBNBT_TAXCA (Q8LL69) 3'-N-debenzoyl-2'-deoxytaxol N-benzoyltransferase (EC|
           2.3.1.-) (DBTNBT)
          Length = 441

 Score = 38.5 bits (88), Expect = 0.008
 Identities = 21/56 (37%), Positives = 34/56 (60%), Gaps = 4/56 (7%)
 Frame = -2

Query: 451 DWSRVGFNEVDYGFGEPGYVFT---LNDDVNIVASVIYLKPPAPKR-GIRLMLRCV 296
           DW R+GF E D+G+G P  V +   L + + + ++ +YL P   K  GI+L+L C+
Sbjct: 363 DWRRLGFYEADFGWGGPLNVSSLQRLENGLPMFSTFLYLLPAKNKSDGIKLLLSCM 418



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>T5AT_TAXCH (Q8S9G6) Taxadien-5-alpha-ol O-acetyltransferase (EC 2.3.1.162)|
           (Taxa-4(20),11(12)-dien-5alpha-ol-O-acetyltransferase)
           (Taxadienol acetyltransferase)
          Length = 439

 Score = 35.0 bits (79), Expect = 0.088
 Identities = 18/52 (34%), Positives = 30/52 (57%), Gaps = 3/52 (5%)
 Frame = -2

Query: 451 DWSRVGFNEVDYGFGEPGYVFTLNDDVNIVAS--VIYLKPPAPK-RGIRLML 305
           DWSR+GF+EVD+G+G    V  +     +      ++LKP   K  GI++++
Sbjct: 363 DWSRLGFDEVDFGWGNAVSVSPVQQQCELAMQNYFLFLKPSKNKPDGIKILM 414



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>T5AT_TAXCU (Q9M6F0) Taxadien-5-alpha-ol O-acetyltransferase (EC 2.3.1.162)|
           (Taxa-4(20),11(12)-dien-5alpha-ol-O-acetyltransferase)
           (Taxadienol acetyltransferase)
          Length = 439

 Score = 33.9 bits (76), Expect = 0.20
 Identities = 18/52 (34%), Positives = 30/52 (57%), Gaps = 3/52 (5%)
 Frame = -2

Query: 451 DWSRVGFNEVDYGFGEPGYVFTLNDDVNIVAS--VIYLKPPAPK-RGIRLML 305
           DWSR+GF+EVD+G+G    V  +     +      ++LKP   K  GI++++
Sbjct: 363 DWSRLGFDEVDFGWGNAVSVSPVQQQSALAMQNYFLFLKPSKNKPDGIKILM 414



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>DEOB_BUCBP (Q89A57) Phosphopentomutase (EC 5.4.2.7) (Phosphodeoxyribomutase)|
          Length = 408

 Score = 30.0 bits (66), Expect = 2.8
 Identities = 18/46 (39%), Positives = 25/46 (54%)
 Frame = +2

Query: 245 LSVLGKLVGEHSRVWLLHATEHQSDPTLGCRWLEVDHRRDNVDIVV 382
           L  L KLV  H+   L+   +H  DPT    W+  DH R+NV I++
Sbjct: 330 LPKLLKLV--HNEDLLIITADHGCDPT----WIGTDHTRENVPILI 369



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>DBAT_TAXCU (Q9M6E2) 10-deacetylbaccatin III 10-O-acetyltransferase (EC|
           2.3.1.167) (DBAT)
          Length = 440

 Score = 30.0 bits (66), Expect = 2.8
 Identities = 16/43 (37%), Positives = 27/43 (62%), Gaps = 4/43 (9%)
 Frame = -2

Query: 451 DWSRVGFNEVDYGFGEPGYVFTLN---DDVNIVAS-VIYLKPP 335
           D  R+GF+EVD+G+G    V  +     DV++V S  ++++PP
Sbjct: 362 DRRRLGFDEVDFGWGHADNVSLVQHGLKDVSVVQSYFLFIRPP 404



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>SALAT_PAPSO (Q94FT4) Salutaridinol 7-O-acetyltransferase (EC 2.3.1.150) (salAT)|
          Length = 474

 Score = 29.6 bits (65), Expect = 3.7
 Identities = 17/66 (25%), Positives = 34/66 (51%)
 Frame = -2

Query: 448 WSRVGFNEVDYGFGEPGYVFTLNDDVNIVASVIYLKPPAPKRGIRLMLRCVEEPHAAVFA 269
           W R+G  E+D+G+G+P +V T++ ++    +  ++       GI        E  A+   
Sbjct: 407 WCRMGLYEIDFGWGKPIWV-TVDPNIKPNKNCFFMNDTKCGEGI--------EVWASFLE 457

Query: 268 DELAKY 251
           D++AK+
Sbjct: 458 DDMAKF 463



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>PAP_CANAL (O42617) Poly(A) polymerase PAPalpha (EC 2.7.7.19) (Polynucleotide|
           adenylyltransferase alpha)
          Length = 558

 Score = 29.3 bits (64), Expect = 4.8
 Identities = 12/33 (36%), Positives = 17/33 (51%)
 Frame = -1

Query: 101 VSLPCVDFFSMCKNSRLLATRTNKIQFMVGQLH 3
           +  PC +F+S+CK S       N IQ    +LH
Sbjct: 478 IQYPCAEFYSICKGSTSFTEGVNFIQIKNVKLH 510



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>PT127_YEAST (P32606) Putative mitochondrial translation system component PET127|
          Length = 800

 Score = 29.3 bits (64), Expect = 4.8
 Identities = 14/52 (26%), Positives = 25/52 (48%)
 Frame = +1

Query: 175 KSTVRRCYRHENMHSATAKKQYPAKRTWQARRRTQPRVAPPRNGASVGSHAW 330
           K+ +++ YRH+     T    YP +RT+  RR    R   P +     S+++
Sbjct: 99  KTNIKKEYRHDKYLERTKVGTYPGRRTYPGRRTYPARRTYPASRTYSDSNSY 150



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>VATF_MANSE (P31478) Vacuolar ATP synthase subunit F (EC 3.6.3.14) (V-ATPase F|
           subunit) (Vacuolar proton pump F subunit) (V-ATPase 14
           kDa subunit)
          Length = 124

 Score = 28.5 bits (62), Expect = 8.2
 Identities = 13/32 (40%), Positives = 23/32 (71%)
 Frame = +2

Query: 356 RRDNVDIVVEREHVSGLAEAVVHLVEADAAPV 451
           +RD++DI++  ++V   AE V H+++A  APV
Sbjct: 61  KRDDIDIILINQNV---AELVRHVIDAHTAPV 89



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>TRPB2_METMA (Q8Q001) Tryptophan synthase beta chain 2 (EC 4.2.1.20)|
          Length = 442

 Score = 28.5 bits (62), Expect = 8.2
 Identities = 15/37 (40%), Positives = 20/37 (54%)
 Frame = -2

Query: 241 DTASWPWPSACSHACNTFSLYFFFTLVCNVFI*RSHY 131
           +T +  W SA S ACN      +F L C V++ RS Y
Sbjct: 144 ETGAGQWGSALSLACN------YFDLECKVYMVRSSY 174


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 63,909,001
Number of Sequences: 219361
Number of extensions: 1303857
Number of successful extensions: 3001
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2927
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2998
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2793557952
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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