>PSD_VIBCH (Q9KV19) Phosphatidylserine decarboxylase proenzyme (EC 4.1.1.65)|
           [Contains: Phosphatidylserine decarboxylase alpha chain;
           Phosphatidylserine decarboxylase beta chain]
          Length = 285

 Score = 30.0 bits (66), Expect = 2.7
 Identities = 22/75 (29%), Positives = 31/75 (41%), Gaps = 2/75 (2%)
 Frame = +3

Query: 21  HTIVACTYYAPTVGVREMVIIRMHPCSLAEELLGDEKAEREGGDADGDHLLVLPRHLHRA 200
           H   AC      +   +++  + H  S  E L GD K   E  D D   L + PR  HR 
Sbjct: 86  HPADACVSQFGAIEYGKLIQAKGHTYSAQELLGGDAKLAEEFRDGDFATLYLSPRDYHRV 145

Query: 201 IRPLH--VRQPLELP 239
             P    +RQ + +P
Sbjct: 146 HMPCDGTLRQMIYVP 160

>HKT1_ARATH (Q84TI7) Sodium transporter HKT1 (AtHKT1)|
          Length = 506

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 16/54 (29%), Positives = 29/54 (53%)
 Frame = +3

Query: 6   SVHFNHTIVACTYYAPTVGVREMVIIRMHPCSLAEELLGDEKAEREGGDADGDH 167
           S H   TIV  +  +P + V  ++++ + P +L   L   +  E+EGGD D ++
Sbjct: 333 SRHTGETIVDLSTLSPAILVLFILMMYLPPYTLFMPLTEQKTIEKEGGDDDSEN 386

>LIGA_RAT (Q5PPG7) Ligatin|
          Length = 570

 Score = 29.3 bits (64), Expect = 4.5
 Identities = 20/54 (37%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
 Frame = -1

Query: 227 GLTDMKWADSAVEMARKNKEVVAVGVAAFSLGFFVSQKLFGK*AG-MHTNDDHL 69
           GL  ++  D        N+  VAVGVAA S    ++  L GK    +HT  DHL
Sbjct: 123 GLPQVQQGDLCAIALVGNRAPVAVGVAAMSTAQMLASGLKGKGISVLHTYQDHL 176

>LIGA_MOUSE (Q61211) Ligatin|
          Length = 570

 Score = 29.3 bits (64), Expect = 4.5
 Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
 Frame = -1

Query: 227 GLTDMKWADSAVEMARKNKEVVAVGVAAFSLGFFVSQKLFGK*AG-MHTNDDHL 69
           GL  ++  D        N+  VA+GVAA S    ++  L GK    +HT  DHL
Sbjct: 123 GLPQVQQGDLCAIALVGNRAPVAIGVAAMSTAQMLASGLKGKGVSVLHTYQDHL 176

>PSD_VIBPA (Q87KZ9) Phosphatidylserine decarboxylase proenzyme (EC 4.1.1.65)|
           [Contains: Phosphatidylserine decarboxylase alpha chain;
           Phosphatidylserine decarboxylase beta chain]
          Length = 285

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 22/75 (29%), Positives = 31/75 (41%), Gaps = 2/75 (2%)
 Frame = +3

Query: 21  HTIVACTYYAPTVGVREMVIIRMHPCSLAEELLGDEKAEREGGDADGDHLLVLPRHLHRA 200
           H   AC      +   +++  + H  S  E L GDEK   E  D     L + PR  HR 
Sbjct: 86  HPADACVSQFGPIEDGQLIQAKGHNYSAQELLGGDEKLAEEFKDGSFATLYLSPRDYHRV 145

Query: 201 IRPLH--VRQPLELP 239
             P    +RQ + +P
Sbjct: 146 HMPCDGTLRQMIYVP 160

>FUI1_YEAST (P38196) Uridine permease|
          Length = 639

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 15/57 (26%), Positives = 25/57 (43%)
 Frame = +1

Query: 52  PLLVYVRWSSFVCIPAHLPKSFWETKKPREKAATPTATTSLFFLAISTALSAHFMSV 222
           P  + +R  S++C    L    W+      K  T  A  ++F  AI+  +SA +  V
Sbjct: 451 PKFINIRRGSYICALISLAICPWDLLSSSSKFTTALAAYAVFLSAIAGVISADYFIV 507


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 43,638,642
Number of Sequences: 219361
Number of extensions: 692233
Number of successful extensions: 2321
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2258
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2320
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2628831825
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)