ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart49a02
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_476017.1| Oryza sativa (japonica cultivar-group), predic... 94 5e-16
2gb|AC130728.2| Oryza sativa (japonica cultivar-group) chromosome... 94 5e-16
3dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 94 5e-16
4ref|NM_192552.1| Oryza sativa (japonica cultivar-group), predic... 52 0.002
5dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 52 0.002
6dbj|AP003300.4| Oryza sativa (japonica cultivar-group) genomic D... 52 0.002
7dbj|AK109917.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 0.002
8gb|BT024102.1| Zea mays clone EL01N0521G07 mRNA sequence 46 0.096
9ref|XM_475252.1| Oryza sativa (japonica cultivar-group), predic... 42 1.5
10ref|NM_187456.1| Oryza sativa (japonica cultivar-group), predic... 42 1.5
11ref|XM_468497.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.5
12ref|XM_464322.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.5
13gb|AC135419.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.5
14gb|AC159445.1| Trypanosoma brucei chromosome 8 clone RPCI93-30P3... 42 1.5
15gb|CP000071.1| Trypanosoma brucei chromosome 8, complete sequence 42 1.5
16gb|DQ302138.1| Leishmania donovani cycling sequence binding prot... 42 1.5
17gb|AC135429.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.5
18gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 42 1.5
19ref|XM_819589.1| Trypanosoma brucei TREU927 clone RPCI93-30P3 p-... 42 1.5
20gb|AC146310.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.5
21gb|AC135205.4| Oryza sativa (japonica cultivar-group) chromosome... 42 1.5
22dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
23dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
24dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
25dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
26dbj|AP004776.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
27dbj|AP004687.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
28dbj|AP003992.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
29dbj|AP005772.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
30dbj|AK120642.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.5
31dbj|AK120527.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.5
32dbj|AK105306.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.5
33dbj|AK104424.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.5
34dbj|AK104116.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.5
35dbj|AK069575.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.5
36dbj|AK061468.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.5
37gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 42 1.5
38dbj|AB053473.1| Oryza sativa mRNA for RISBZ4, complete cds 42 1.5
39gb|CP000112.1| Desulfovibrio desulfuricans G20, complete genome 40 5.9
40ref|XM_550103.1| Oryza sativa (japonica cultivar-group), mRNA 40 5.9
41ref|NM_188661.1| Oryza sativa (japonica cultivar-group), Ozsa826... 40 5.9
42gb|AC152104.2| Ostreococcus sp. CCE9901 clone JGIACFB-9A2, compl... 40 5.9
43ref|XM_511210.1| PREDICTED: Pan troglodytes similar to fructose-... 40 5.9
44ref|XM_462952.1| Oryza sativa (japonica cultivar-group), predic... 40 5.9
45gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence 40 5.9
46gb|AE001274.2| Leishmania major strain Friedlin chromosome 1, co... 40 5.9
47gb|AC016781.6| Oryza sativa (japonica cultivar-group) clone OSJN... 40 5.9
48gb|AC102438.8| Mus musculus chromosome 5, clone RP24-137F10, com... 40 5.9
49gb|AC103621.6| Mus musculus chromosome 5, clone RP24-230J14, com... 40 5.9
50ref|XM_415015.1| PREDICTED: Gallus gallus EDT-soluble/130 kDa pr... 40 5.9
51ref|XM_955737.1| Neurospora crassa OR74A hypothetical protein (N... 40 5.9
52ref|XM_326899.1| Neurospora crassa OR74A hypothetical protein (N... 40 5.9
53ref|NM_173764.3| Mus musculus RIKEN cDNA 4932414K18 gene (493241... 40 5.9
54gb|BC066899.1| Homo sapiens hypothetical protein FLJ90013, mRNA ... 40 5.9
55gb|AC012645.7| Homo sapiens chromosome 16 clone RP11-455F5, comp... 40 5.9
56ref|XM_545933.2| PREDICTED: Canis familiaris similar to CG7218-P... 40 5.9
57emb|CR655724.2|CNS0F4XE Tetraodon nigroviridis full-length cDNA 40 5.9
58gb|U41993.1| Caenorhabditis elegans cosmid F44A2, complete sequence 40 5.9
59emb|CR649523.2|CNS0F055 Tetraodon nigroviridis full-length cDNA 40 5.9
60gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete ... 40 5.9
61emb|X58924.1|HVRPL11E H.volcanii genes for ribosomal proteins L1... 40 5.9
62emb|CR318607.7| Zebrafish DNA sequence from clone CH211-237H22 i... 40 5.9
63dbj|AK074494.1| Homo sapiens cDNA FLJ90013 fis, clone HEMBA1000477 40 5.9
64gb|AC110088.5| Homo sapiens BAC clone RP11-783N5 from 4, complet... 40 5.9
65gb|AC093512.2| Homo sapiens chromosome 16 clone CTD-2515O10, com... 40 5.9
66gb|AC012378.10| Homo sapiens chromosome 15 clone RP11-420M1 map ... 40 5.9
67ref|NM_073006.2| Caenorhabditis elegans F44A2.2 (F44A2.2) mRNA, ... 40 5.9
68ref|NM_153365.1| Homo sapiens hypothetical protein FLJ90013 (FLJ... 40 5.9
69ref|XM_223500.3| PREDICTED: Rattus norvegicus similar to hypothe... 40 5.9
70dbj|AP001539.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.9
71dbj|AP003311.2| Oryza sativa (japonica cultivar-group) genomic D... 40 5.9
72dbj|AP002483.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.9
73emb|BX842619.1| Neurospora crassa DNA linkage group V cosmid clo... 40 5.9
74dbj|AK120731.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.9
75dbj|AK119686.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.9
76emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid compl... 40 5.9
77dbj|AK064696.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.9
78gb|L13973.1|CHK130ES Gallus gallus EDT-soluble/130 kDa protein m... 40 5.9
79emb|X06351.1|HSALDA1 Human aldolase A gene 5' non-coding exons 40 5.9 
>ref|XM_476017.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 945

 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 95/111 (85%)
 Strand = Plus / Minus

                                                                       
Query: 108 gaagagcttctgggagacgaaaaagccgagagagaaggcggcgacgccgacggcgaccac 167
           ||||| ||| ||||||||||| |||||||| ||||||||||||||| ||  |||||  ||
Sbjct: 933 gaagaacttgtgggagacgaagaagccgagggagaaggcggcgacggcggtggcgatgac 874

                                                              
Query: 168 ctccttgttcttcctcgccatctccaccgcgctatccgcccacttcatgtc 218
            ||||||||| |||||||| |||||||| |||  ||||||||| |||||||
Sbjct: 873 atccttgttcctcctcgccgtctccaccacgccctccgcccacctcatgtc 823
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>gb|AC130728.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0663C08,
             complete sequence
          Length = 142196

 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 95/111 (85%)
 Strand = Plus / Minus

                                                                         
Query: 108   gaagagcttctgggagacgaaaaagccgagagagaaggcggcgacgccgacggcgaccac 167
             ||||| ||| ||||||||||| |||||||| ||||||||||||||| ||  |||||  ||
Sbjct: 54024 gaagaacttgtgggagacgaagaagccgagggagaaggcggcgacggcggtggcgatgac 53965

                                                                
Query: 168   ctccttgttcttcctcgccatctccaccgcgctatccgcccacttcatgtc 218
              ||||||||| |||||||| |||||||| |||  ||||||||| |||||||
Sbjct: 53964 atccttgttcctcctcgccgtctccaccacgccctccgcccacctcatgtc 53914
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 95/111 (85%)
 Strand = Plus / Minus

                                                                            
Query: 108      gaagagcttctgggagacgaaaaagccgagagagaaggcggcgacgccgacggcgaccac 167
                ||||| ||| ||||||||||| |||||||| ||||||||||||||| ||  |||||  ||
Sbjct: 29275367 gaagaacttgtgggagacgaagaagccgagggagaaggcggcgacggcggtggcgatgac 29275308

                                                                   
Query: 168      ctccttgttcttcctcgccatctccaccgcgctatccgcccacttcatgtc 218
                 ||||||||| |||||||| |||||||| |||  ||||||||| |||||||
Sbjct: 29275307 atccttgttcctcctcgccgtctccaccacgccctccgcccacctcatgtc 29275257



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 145      gcggcgacgccgacggcgacc 165
                |||||||||||||||||||||
Sbjct: 20797067 gcggcgacgccgacggcgacc 20797047
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>ref|NM_192552.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 810

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 53/62 (85%)
 Strand = Plus / Minus

                                                                       
Query: 120 ggagacgaaaaagccgagagagaaggcggcgacgccgacggcgaccacctccttgttctt 179
           ||||||||| | |||||| | ||| ||||||||| |   |||||||||||||||||||||
Sbjct: 783 ggagacgaagacgccgagtgcgaacgcggcgacggccgtggcgaccacctccttgttctt 724

             
Query: 180 cc 181
           ||
Sbjct: 723 cc 722
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 53/62 (85%)
 Strand = Plus / Plus

                                                                            
Query: 120      ggagacgaaaaagccgagagagaaggcggcgacgccgacggcgaccacctccttgttctt 179
                ||||||||| | |||||| | ||| ||||||||| |   |||||||||||||||||||||
Sbjct: 22897304 ggagacgaagacgccgagtgcgaacgcggcgacggccgtggcgaccacctccttgttctt 22897363

                  
Query: 180      cc 181
                ||
Sbjct: 22897364 cc 22897365



 Score = 40.1 bits (20), Expect = 5.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 144     ggcggcgacgccgacggcgaccacctcc 171
               |||||||||| ||||| |||||||||||
Sbjct: 7481442 ggcggcgacgacgacgccgaccacctcc 7481415



 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 145     gcggcgacgccgacggcgac 164
               ||||||||||||||||||||
Sbjct: 2376740 gcggcgacgccgacggcgac 2376759
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>dbj|AP003300.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0700A11
          Length = 136321

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 53/62 (85%)
 Strand = Plus / Plus

                                                                          
Query: 120    ggagacgaaaaagccgagagagaaggcggcgacgccgacggcgaccacctccttgttctt 179
              ||||||||| | |||||| | ||| ||||||||| |   |||||||||||||||||||||
Sbjct: 100861 ggagacgaagacgccgagtgcgaacgcggcgacggccgtggcgaccacctccttgttctt 100920

                
Query: 180    cc 181
              ||
Sbjct: 100921 cc 100922
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>dbj|AK109917.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-150-D11, full
           insert sequence
          Length = 1072

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 53/62 (85%)
 Strand = Plus / Minus

                                                                       
Query: 120 ggagacgaaaaagccgagagagaaggcggcgacgccgacggcgaccacctccttgttctt 179
           ||||||||| | |||||| | ||| ||||||||| |   |||||||||||||||||||||
Sbjct: 946 ggagacgaagacgccgagtgcgaacgcggcgacggccgtggcgaccacctccttgttctt 887

             
Query: 180 cc 181
           ||
Sbjct: 886 cc 885
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>gb|BT024102.1| Zea mays clone EL01N0521G07 mRNA sequence
          Length = 1648

 Score = 46.1 bits (23), Expect = 0.096
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 143 aggcggcgacgccgacggcgacc 165
           |||||||||||||||||||||||
Sbjct: 26  aggcggcgacgccgacggcgacc 4
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>ref|XM_475252.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1101

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 145 gcggcgacgccgacggcgacc 165
           |||||||||||||||||||||
Sbjct: 418 gcggcgacgccgacggcgacc 398
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>ref|NM_187456.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1281

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 180 cctcgccatctccaccgcgct 200
           |||||||||||||||||||||
Sbjct: 510 cctcgccatctccaccgcgct 530
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>ref|XM_468497.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1098

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 139 gagaaggcggcgacgccgacggcga 163
           ||||||||||||||| |||||||||
Sbjct: 185 gagaaggcggcgacgtcgacggcga 161
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>ref|XM_464322.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1149

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 144 ggcggcgacgccgacggcgaccacc 168
           |||||||||||||||| ||||||||
Sbjct: 160 ggcggcgacgccgacgccgaccacc 184
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>gb|AC135419.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0044P19,
              complete sequence
          Length = 176917

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 145    gcggcgacgccgacggcgacc 165
              |||||||||||||||||||||
Sbjct: 110291 gcggcgacgccgacggcgacc 110271
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>gb|AC159445.1| Trypanosoma brucei chromosome 8 clone RPCI93-30P3, complete sequence
          Length = 98658

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 244   atgcgctccttccacgcggtg 264
             |||||||||||||||||||||
Sbjct: 84744 atgcgctccttccacgcggtg 84764
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>gb|CP000071.1| Trypanosoma brucei chromosome 8, complete sequence
          Length = 2481190

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 244     atgcgctccttccacgcggtg 264
               |||||||||||||||||||||
Sbjct: 2164641 atgcgctccttccacgcggtg 2164621
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>gb|DQ302138.1| Leishmania donovani cycling sequence binding protein (CSBP) gene,
            complete cds
          Length = 2697

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 146  cggcgacgccgacggcgaccacctc 170
            |||||||| ||||||||||||||||
Sbjct: 1410 cggcgacggcgacggcgaccacctc 1434
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>gb|AC135429.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0636F09,
             complete sequence
          Length = 177374

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 145   gcggcgacgccgacggcgacc 165
             |||||||||||||||||||||
Sbjct: 52872 gcggcgacgccgacggcgacc 52852
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 180     cctcgccatctccaccgcgct 200
               |||||||||||||||||||||
Sbjct: 8726446 cctcgccatctccaccgcgct 8726466



 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 144      ggcggcgacgccgacggcgaccac 167
                |||||||||||||||| |||||||
Sbjct: 20156670 ggcggcgacgccgacgacgaccac 20156647
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>ref|XM_819589.1| Trypanosoma brucei TREU927 clone RPCI93-30P3
           p-nitrophenylphosphatase (Tb927.8.7510) partial mRNA
          Length = 1170

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 244 atgcgctccttccacgcggtg 264
           |||||||||||||||||||||
Sbjct: 533 atgcgctccttccacgcggtg 513
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>gb|AC146310.2| Oryza sativa (japonica cultivar-group) chromosome 10 clone B1082A06,
             complete sequence
          Length = 135774

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 141   gaaggcggcgacgccgacggc 161
             |||||||||||||||||||||
Sbjct: 63146 gaaggcggcgacgccgacggc 63166
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>gb|AC135205.4| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1012B02,
             complete sequence
          Length = 115270

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 180   cctcgccatctccaccgcgct 200
             |||||||||||||||||||||
Sbjct: 70097 cctcgccatctccaccgcgct 70117
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 141      gaaggcggcgacgccgacggc 161
                |||||||||||||||||||||
Sbjct: 11609211 gaaggcggcgacgccgacggc 11609231
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 144     ggcggcgacgccgacggcgac 164
               |||||||||||||||||||||
Sbjct: 5653183 ggcggcgacgccgacggcgac 5653163
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 180     cctcgccatctccaccgcgct 200
               |||||||||||||||||||||
Sbjct: 8724281 cctcgccatctccaccgcgct 8724301



 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 144      ggcggcgacgccgacggcgaccac 167
                |||||||||||||||| |||||||
Sbjct: 20149697 ggcggcgacgccgacgacgaccac 20149674
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 139      gagaaggcggcgacgccgacggcga 163
                ||||||||||||||| |||||||||
Sbjct: 35543649 gagaaggcggcgacgtcgacggcga 35543673



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 144     ggcggcgacgccgacggcgaccacc 168
               |||||||||||||||| ||||||||
Sbjct: 4109965 ggcggcgacgccgacgccgaccacc 4109989
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>dbj|AP004776.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0452F04
          Length = 171421

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 139   gagaaggcggcgacgccgacggcga 163
             ||||||||||||||| |||||||||
Sbjct: 60041 gagaaggcggcgacgtcgacggcga 60065
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>dbj|AP004687.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0021C04
          Length = 162115

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 144   ggcggcgacgccgacggcgac 164
             |||||||||||||||||||||
Sbjct: 45330 ggcggcgacgccgacggcgac 45310
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>dbj|AP003992.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1077_E05
          Length = 116305

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 144   ggcggcgacgccgacggcgaccacc 168
             |||||||||||||||| ||||||||
Sbjct: 19979 ggcggcgacgccgacgccgaccacc 20003
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>dbj|AP005772.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OSJNBa0073A21
          Length = 170051

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 144    ggcggcgacgccgacggcgaccacc 168
              |||||||||||||||| ||||||||
Sbjct: 156631 ggcggcgacgccgacgccgaccacc 156655
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>dbj|AK120642.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013154O20, full
           insert sequence
          Length = 1856

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 145 gcggcgacgccgacggcgacc 165
           |||||||||||||||||||||
Sbjct: 979 gcggcgacgccgacggcgacc 959
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>dbj|AK120527.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013127C20, full
           insert sequence
          Length = 1301

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 180 cctcgccatctccaccgcgct 200
           |||||||||||||||||||||
Sbjct: 623 cctcgccatctccaccgcgct 643
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>dbj|AK105306.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-117-A12, full
           insert sequence
          Length = 1722

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 145 gcggcgacgccgacggcgacc 165
           |||||||||||||||||||||
Sbjct: 845 gcggcgacgccgacggcgacc 825
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>dbj|AK104424.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-205-F06, full
           insert sequence
          Length = 1212

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 180 cctcgccatctccaccgcgct 200
           |||||||||||||||||||||
Sbjct: 572 cctcgccatctccaccgcgct 592
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>dbj|AK104116.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-A01, full
           insert sequence
          Length = 1227

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 180 cctcgccatctccaccgcgct 200
           |||||||||||||||||||||
Sbjct: 574 cctcgccatctccaccgcgct 594
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>dbj|AK069575.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023025A18, full
           insert sequence
          Length = 1149

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 144 ggcggcgacgccgacggcgaccacc 168
           |||||||||||||||| ||||||||
Sbjct: 160 ggcggcgacgccgacgccgaccacc 184
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>dbj|AK061468.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-D01, full
           insert sequence
          Length = 1249

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 180 cctcgccatctccaccgcgct 200
           |||||||||||||||||||||
Sbjct: 572 cctcgccatctccaccgcgct 592
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 141      gaaggcggcgacgccgacggc 161
                |||||||||||||||||||||
Sbjct: 11615651 gaaggcggcgacgccgacggc 11615671
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>dbj|AB053473.1| Oryza sativa mRNA for RISBZ4, complete cds
          Length = 1210

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 144 ggcggcgacgccgacggcgaccacc 168
           |||||||||||||||| ||||||||
Sbjct: 199 ggcggcgacgccgacgccgaccacc 223
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>gb|CP000112.1| Desulfovibrio desulfuricans G20, complete genome
          Length = 3730232

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 302    tctcttccatggttgccggc 321
              ||||||||||||||||||||
Sbjct: 669523 tctcttccatggttgccggc 669504
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>ref|XM_550103.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 617

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 145 gcggcgacgccgacggcgac 164
           ||||||||||||||||||||
Sbjct: 246 gcggcgacgccgacggcgac 227
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>ref|NM_188661.1| Oryza sativa (japonica cultivar-group), Ozsa8264 predicted mRNA
          Length = 2952

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 144 ggcggcgacgccgacggcgaccacctcc 171
           |||||||||| ||||| |||||||||||
Sbjct: 247 ggcggcgacgacgacgccgaccacctcc 274
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>gb|AC152104.2| Ostreococcus sp. CCE9901 clone JGIACFB-9A2, complete sequence
          Length = 37168

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 145   gcggcgacgccgacggcgac 164
             ||||||||||||||||||||
Sbjct: 23841 gcggcgacgccgacggcgac 23822
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>ref|XM_511210.1| PREDICTED: Pan troglodytes similar to fructose-1,6-bisphosphate
           aldolase A (LOC454361), mRNA
          Length = 1110

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 278 ccgccgccttctcgcgctcc 297
           ||||||||||||||||||||
Sbjct: 178 ccgccgccttctcgcgctcc 197
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>ref|XM_462952.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 3291

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 144  ggcggcgacgccgacggcgaccac 167
            |||||||||||||||| |||||||
Sbjct: 1924 ggcggcgacgccgacgacgaccac 1947
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>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence
          Length = 3694126

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 148     gcgacgccgacggcgaccac 167
               ||||||||||||||||||||
Sbjct: 2409705 gcgacgccgacggcgaccac 2409686
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>gb|AE001274.2| Leishmania major strain Friedlin chromosome 1, complete sequence
          Length = 268984

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 271   gccgccaccgccgccttctcgcgc 294
             |||||||||||||||| |||||||
Sbjct: 46408 gccgccaccgccgcctgctcgcgc 46431
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>gb|AC016781.6| Oryza sativa (japonica cultivar-group) clone OSJNBa0084C09, complete
             sequence
          Length = 151269

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 144   ggcggcgacgccgacggcgaccac 167
             |||||||||||||||| |||||||
Sbjct: 74754 ggcggcgacgccgacgacgaccac 74731
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>gb|AC102438.8| Mus musculus chromosome 5, clone RP24-137F10, complete sequence
          Length = 205785

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 271    gccgccaccgccgccttctc 290
              ||||||||||||||||||||
Sbjct: 204860 gccgccaccgccgccttctc 204841
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>gb|AC103621.6| Mus musculus chromosome 5, clone RP24-230J14, complete sequence
          Length = 169247

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 271    gccgccaccgccgccttctc 290
              ||||||||||||||||||||
Sbjct: 151835 gccgccaccgccgccttctc 151854
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>ref|XM_415015.1| PREDICTED: Gallus gallus EDT-soluble/130 kDa protein (LOC396414),
            mRNA
          Length = 3054

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 400  gctgccgccttggccttctc 419
            ||||||||||||||||||||
Sbjct: 1007 gctgccgccttggccttctc 988
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>ref|XM_955737.1| Neurospora crassa OR74A hypothetical protein (NCU01407.1) partial
            mRNA
          Length = 1620

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 269  atgccgccaccgccgccttc 288
            ||||||||||||||||||||
Sbjct: 1541 atgccgccaccgccgccttc 1522
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>ref|XM_326899.1| Neurospora crassa OR74A hypothetical protein (NCU01407.1) partial
            mRNA
          Length = 1620

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 269  atgccgccaccgccgccttc 288
            ||||||||||||||||||||
Sbjct: 1541 atgccgccaccgccgccttc 1522
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>ref|NM_173764.3| Mus musculus RIKEN cDNA 4932414K18 gene (4932414K18Rik), mRNA
          Length = 3508

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 271 gccgccaccgccgccttctc 290
           ||||||||||||||||||||
Sbjct: 54  gccgccaccgccgccttctc 35
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>gb|BC066899.1| Homo sapiens hypothetical protein FLJ90013, mRNA (cDNA clone
           MGC:87011 IMAGE:4825556), complete cds
          Length = 2303

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 271 gccgccaccgccgccttctc 290
           ||||||||||||||||||||
Sbjct: 70  gccgccaccgccgccttctc 51
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>gb|AC012645.7| Homo sapiens chromosome 16 clone RP11-455F5, complete sequence
          Length = 192943

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 278  ccgccgccttctcgcgctcc 297
            ||||||||||||||||||||
Sbjct: 2537 ccgccgccttctcgcgctcc 2556
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>ref|XM_545933.2| PREDICTED: Canis familiaris similar to CG7218-PA (LOC488815), mRNA
          Length = 1707

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 271 gccgccaccgccgccttctc 290
           ||||||||||||||||||||
Sbjct: 51  gccgccaccgccgccttctc 32
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>emb|CR655724.2|CNS0F4XE Tetraodon nigroviridis full-length cDNA
          Length = 1157

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 147 ggcgacgccgacggcgacca 166
           ||||||||||||||||||||
Sbjct: 471 ggcgacgccgacggcgacca 452
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>gb|U41993.1| Caenorhabditis elegans cosmid F44A2, complete sequence
          Length = 38640

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 170   ccttgttcttcctcgccatctccaccgc 197
             ||||||||||| || |||||||||||||
Sbjct: 29010 ccttgttcttcgtctccatctccaccgc 28983
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>emb|CR649523.2|CNS0F055 Tetraodon nigroviridis full-length cDNA
          Length = 1294

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 147 ggcgacgccgacggcgacca 166
           ||||||||||||||||||||
Sbjct: 627 ggcgacgccgacggcgacca 608
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>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence
          Length = 2726152

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 141    gaaggcggcgacgccgacgg 160
              ||||||||||||||||||||
Sbjct: 562735 gaaggcggcgacgccgacgg 562716
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>emb|X58924.1|HVRPL11E H.volcanii genes for ribosomal proteins L11e, L1e, L10e and L12e
          Length = 3450

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 141  gaaggcggcgacgccgacggcgac 164
            ||||||||||||| ||||||||||
Sbjct: 3248 gaaggcggcgacgacgacggcgac 3271
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>emb|CR318607.7| Zebrafish DNA sequence from clone CH211-237H22 in linkage group 14,
             complete sequence
          Length = 111412

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 340   gccctcttttcctcaccgtc 359
             ||||||||||||||||||||
Sbjct: 57149 gccctcttttcctcaccgtc 57130
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>dbj|AK074494.1| Homo sapiens cDNA FLJ90013 fis, clone HEMBA1000477
          Length = 3382

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 271 gccgccaccgccgccttctc 290
           ||||||||||||||||||||
Sbjct: 65  gccgccaccgccgccttctc 46
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>gb|AC110088.5| Homo sapiens BAC clone RP11-783N5 from 4, complete sequence
          Length = 48126

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 271   gccgccaccgccgccttctc 290
             ||||||||||||||||||||
Sbjct: 40545 gccgccaccgccgccttctc 40564
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>gb|AC093512.2| Homo sapiens chromosome 16 clone CTD-2515O10, complete sequence
          Length = 157481

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 278    ccgccgccttctcgcgctcc 297
              ||||||||||||||||||||
Sbjct: 133220 ccgccgccttctcgcgctcc 133239
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>gb|AC012378.10| Homo sapiens chromosome 15 clone RP11-420M1 map 15q21.3, complete
             sequence
          Length = 199289

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 272   ccgccaccgccgccttctcgcgctccgc 299
             ||||||||||||||  ||||||||||||
Sbjct: 50407 ccgccaccgccgccgcctcgcgctccgc 50434
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>ref|NM_073006.2| Caenorhabditis elegans F44A2.2 (F44A2.2) mRNA, complete cds
          Length = 1356

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 170  ccttgttcttcctcgccatctccaccgc 197
            ||||||||||| || |||||||||||||
Sbjct: 1259 ccttgttcttcgtctccatctccaccgc 1232
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>ref|NM_153365.1| Homo sapiens hypothetical protein FLJ90013 (FLJ90013), mRNA
          Length = 3382

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 271 gccgccaccgccgccttctc 290
           ||||||||||||||||||||
Sbjct: 65  gccgccaccgccgccttctc 46
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>ref|XM_223500.3| PREDICTED: Rattus norvegicus similar to hypothetical protein
           FLJ90013 (predicted) (LOC305386), mRNA
          Length = 2318

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 271 gccgccaccgccgccttctc 290
           ||||||||||||||||||||
Sbjct: 51  gccgccaccgccgccttctc 32
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>dbj|AP001539.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
             clone:P0708G02
          Length = 168976

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 144   ggcggcgacgccgacggcgaccacctcc 171
             |||||||||| ||||| |||||||||||
Sbjct: 30234 ggcggcgacgacgacgccgaccacctcc 30207
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>dbj|AP003311.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0024G09
          Length = 175565

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 145    gcggcgacgccgacggcgac 164
              ||||||||||||||||||||
Sbjct: 105790 gcggcgacgccgacggcgac 105809
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>dbj|AP002483.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
              clone:P0019D06
          Length = 167405

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 145    gcggcgacgccgacggcgac 164
              ||||||||||||||||||||
Sbjct: 160324 gcggcgacgccgacggcgac 160343
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>emb|BX842619.1| Neurospora crassa DNA linkage group V cosmid clone G11A3
          Length = 37992

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 269   atgccgccaccgccgccttc 288
             ||||||||||||||||||||
Sbjct: 23621 atgccgccaccgccgccttc 23602
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>dbj|AK120731.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023003C05, full
           insert sequence
          Length = 659

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 145 gcggcgacgccgacggcgac 164
           ||||||||||||||||||||
Sbjct: 241 gcggcgacgccgacggcgac 222
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>dbj|AK119686.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-157-A05, full
           insert sequence
          Length = 617

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 145 gcggcgacgccgacggcgac 164
           ||||||||||||||||||||
Sbjct: 246 gcggcgacgccgacggcgac 227
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>emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid complete sequence
          Length = 2094509

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 101    acttgccgaagagcttctgg 120
              ||||||||||||||||||||
Sbjct: 429455 acttgccgaagagcttctgg 429436
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>dbj|AK064696.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-116-F11, full
           insert sequence
          Length = 1754

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 144 ggcggcgacgccgacggcgaccacctcc 171
           |||||||||| ||||| |||||||||||
Sbjct: 373 ggcggcgacgacgacgccgaccacctcc 400
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>gb|L13973.1|CHK130ES Gallus gallus EDT-soluble/130 kDa protein mRNA, complete cds
          Length = 2582

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 400 gctgccgccttggccttctc 419
           ||||||||||||||||||||
Sbjct: 745 gctgccgccttggccttctc 726
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>emb|X06351.1|HSALDA1 Human aldolase A gene 5' non-coding exons
          Length = 3586

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 278  ccgccgccttctcgcgctcc 297
            ||||||||||||||||||||
Sbjct: 2533 ccgccgccttctcgcgctcc 2552


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,686,653
Number of Sequences: 3902068
Number of extensions: 3686653
Number of successful extensions: 87462
Number of sequences better than 10.0: 79
Number of HSP's better than 10.0 without gapping: 85
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 86045
Number of HSP's gapped (non-prelim): 1417
length of query: 440
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 418
effective length of database: 17,147,199,772
effective search space: 7167529504696
effective search space used: 7167529504696
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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