>SP2AB_THETN (Q8RAA8) Anti-sigma F factor (EC 2.7.11.1) (Stage II sporulation|
           protein AB)
          Length = 143

 Score = 30.0 bits (66), Expect = 2.7
 Identities = 10/32 (31%), Positives = 22/32 (68%)
 Frame = +3

Query: 60  SYNNKITVINLRL*VTSHRLQIQIVNENSGID 155
           +Y NKI +I +R  +  +++ I++++E  GI+
Sbjct: 57  AYENKIGIITIRAFILDNKITIEVIDEGKGIE 88

>KCNAE_DROME (Q02280) Potassium voltage-gated channel protein eag (Ether-a-go-go|
            protein)
          Length = 1174

 Score = 29.3 bits (64), Expect = 4.5
 Identities = 16/35 (45%), Positives = 18/35 (51%)
 Frame = +1

Query: 322  GAGGEGKGMTRVFFPTTMVMYPPSSSAAGDGEGDP 426
            G GG G G T    PTT    PP ++A G G G P
Sbjct: 1125 GGGGSGSGAT----PTT----PPPTTAGGSGSGTP 1151

>IASPP_MOUSE (Q5I1X5) RelA-associated inhibitor (Inhibitor of ASPP protein)|
           (Protein iASPP) (PPP1R13B-like protein)
           (NFkB-interacting protein 1)
          Length = 824

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
 Frame = +1

Query: 223 SEKDHSTEATLERNTD*LCIRQVNKSHL--FQALPGAGGEGKGMTRVFFPTTMVMYPPSS 396
           S KDH T ATL RN     +    +S +  ++   G+ G    + R + P + +  PPSS
Sbjct: 298 SGKDHLTSATLPRNYKVSPLASDRRSDVGSYRRSLGSAGPSGTLPRSWQPVSRIPMPPSS 357

>AAAD_MOUSE (Q99PG0) Arylacetamide deacetylase (EC 3.1.1.-) (AADAC)|
          Length = 397

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = +3

Query: 105 TSHRLQIQIVNENSGIDPKFSVPRHVHVIYRT 200
           T+H+L   +V+ + G+ PK   PR    +YR+
Sbjct: 130 TAHKLDAVVVSTDYGLAPKHHFPRQFEDVYRS 161


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 57,136,540
Number of Sequences: 219361
Number of extensions: 1071041
Number of successful extensions: 2298
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2265
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2298
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2628831825
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)