Clone Name | rbart48h06 |
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Clone Library Name | barley_pub |
>IN21_MAIZE (P49248) IN2-1 protein| Length = 243 Score = 87.0 bits (214), Expect = 2e-17 Identities = 40/68 (58%), Positives = 52/68 (76%) Frame = -2 Query: 494 QFSLVDIAYVPFIERFQIFFSGIKNYDITKDRPNIQKFIEEVNKIDAYTQTKLDPQFLLQ 315 QFSL D+AYV +ER QI++S ++NYDI + RPN+Q+FI+E+NKI+AY QTK DP FLL Sbjct: 175 QFSLADVAYVTILERVQIYYSHLRNYDIAQGRPNLQEFIDEMNKIEAYAQTKNDPLFLLD 234 Query: 314 HTKKRLGI 291 K L I Sbjct: 235 LAKSHLKI 242
>SOCS4_MOUSE (Q91ZA6) Suppressor of cytokine signaling 4 (SOCS-4) (Suppressor of| cytokine signaling 7) (SOCS-7) Length = 436 Score = 32.3 bits (72), Expect = 0.71 Identities = 16/46 (34%), Positives = 23/46 (50%) Frame = -3 Query: 412 SPRTDLTFRNSSRK*TRSMHTHKRSWTHNFCFNTQRSGLGLSEDMT 275 S + D F S R+ +RS+H W HNF F+ + S D+T Sbjct: 310 SAQEDYLFSVSFRRYSRSLHARIEQWNHNFSFDAHDPCVFHSPDIT 355
>OR7A5_HUMAN (Q15622) Olfactory receptor 7A5 (Olfactory receptor TPCR92)| Length = 319 Score = 32.3 bits (72), Expect = 0.71 Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 6/65 (9%) Frame = +3 Query: 255 PGLCSCLVISSLNPKPLLCVLKQKLWVQLRLCVCIDLVHFLDEFLNV------RSVLGDI 416 P LC LV++S L +L+ + V+L C +++ HF E V S L + Sbjct: 138 PHLCGLLVLASWTMSALYSLLQILMVVRLSFCTALEIPHFFCELNQVIQLACSDSFLNHM 197 Query: 417 IVFYT 431 ++++T Sbjct: 198 VIYFT 202
>SOCS4_HUMAN (Q8WXH5) Suppressor of cytokine signaling 4 (SOCS-4) (Suppressor of| cytokine signaling 7) (SOCS-7) Length = 440 Score = 32.3 bits (72), Expect = 0.71 Identities = 16/46 (34%), Positives = 23/46 (50%) Frame = -3 Query: 412 SPRTDLTFRNSSRK*TRSMHTHKRSWTHNFCFNTQRSGLGLSEDMT 275 S + D F S R+ +RS+H W HNF F+ + S D+T Sbjct: 313 SAQEDYLFSVSFRRYSRSLHARIEQWNHNFSFDAHDPCVFHSPDIT 358
>SOCS5_MOUSE (O54928) Cytokine-inducible SH2-containing protein 5 (Suppressor of| cytokine signaling 5) (SOCS-5) Length = 536 Score = 30.4 bits (67), Expect = 2.7 Identities = 13/33 (39%), Positives = 17/33 (51%) Frame = -3 Query: 412 SPRTDLTFRNSSRK*TRSMHTHKRSWTHNFCFN 314 S + D F S R+ RS+H W HNF F+ Sbjct: 408 SAQEDYLFSVSFRRYNRSLHARIEQWNHNFSFD 440
>SOCS5_HUMAN (O75159) Cytokine-inducible SH2-containing protein 5 (Suppressor of| cytokine signaling 5) (SOCS-5) (Cytokine-inducible SH2 protein 6) (CIS-6) Length = 536 Score = 30.4 bits (67), Expect = 2.7 Identities = 13/33 (39%), Positives = 17/33 (51%) Frame = -3 Query: 412 SPRTDLTFRNSSRK*TRSMHTHKRSWTHNFCFN 314 S + D F S R+ RS+H W HNF F+ Sbjct: 408 SAQEDYLFSVSFRRYNRSLHARIEQWNHNFSFD 440
>MYLIP_MOUSE (Q8BM54) Ubiquitin ligase MYLIP (EC 6.3.2.-) (Myosin regulatory| light chain-interacting protein) (MIR) Length = 445 Score = 30.4 bits (67), Expect = 2.7 Identities = 15/36 (41%), Positives = 18/36 (50%) Frame = -1 Query: 174 IKRCMLLRSCLLRIN*VVDCDYSILSTFCDCGLTVC 67 +K ML +C C+ I STFC CG TVC Sbjct: 381 LKEAMLCMAC---------CEEEINSTFCPCGHTVC 407
>MYLIP_HUMAN (Q8WY64) Ubiquitin ligase MYLIP (EC 6.3.2.-) (Myosin regulatory| light chain-interacting protein) (MIR) Length = 445 Score = 29.6 bits (65), Expect = 4.6 Identities = 12/20 (60%), Positives = 14/20 (70%) Frame = -1 Query: 126 VVDCDYSILSTFCDCGLTVC 67 +V C+ I STFC CG TVC Sbjct: 388 MVCCEEEINSTFCPCGHTVC 407 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 70,711,301 Number of Sequences: 219361 Number of extensions: 1406048 Number of successful extensions: 3362 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 3288 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3356 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3465624120 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)