ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart48h06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_493844.1| Oryza sativa (japonica cultivar-group), mRNA 252 9e-64
2dbj|AK065887.1| Oryza sativa (japonica cultivar-group) cDNA clon... 252 9e-64
3dbj|AK061849.1| Oryza sativa (japonica cultivar-group) cDNA clon... 252 9e-64
4gb|AY108092.1| Zea mays PCO124824 mRNA sequence 168 1e-38
5gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 147 4e-32
6gb|AC084405.6| Oryza sativa chromosome 3 BAC OSJNBa0044H10 genom... 147 4e-32
7dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 147 4e-32
8gb|AY111952.1| Zea mays CL5438_1 mRNA sequence 147 4e-32
9ref|XM_493845.1| Oryza sativa (japonica cultivar-group), mRNA 54 4e-04
10gb|AF237487.2|AF237487 Oryza sativa XIG mRNA, complete cds 54 4e-04
11gb|DQ450070.1| Arachis hypogaea clone 7A4R17G putative IN2-1 pro... 52 0.002
12gb|DQ294619.1| Arachis hypogaea IN2-1 protein-like mRNA, partial... 52 0.002
13gb|AY809335.1| Schistosoma japonicum SJCHGC08687 protein mRNA, p... 44 0.43
14emb|CT009696.9| Mouse DNA sequence from clone RP23-11B13 on chro... 44 0.43
15emb|AL355816.14| Human DNA sequence from clone RP5-1180E21 on ch... 44 0.43
16emb|CR626576.1| full-length cDNA clone CS0DI006YB10 of Placenta ... 44 0.43
17emb|CR613969.1| full-length cDNA clone CS0DI042YD14 of Placenta ... 44 0.43
18emb|CR607093.1| full-length cDNA clone CS0DI013YN23 of Placenta ... 44 0.43
19emb|AL833098.1|HSM804409 Homo sapiens mRNA; cDNA DKFZp313E1815 (... 44 0.43
20gb|AC135230.8| Medicago truncatula clone mth2-23e14, complete se... 42 1.7
21gb|AC137829.23| Medicago truncatula clone mth2-34j5, complete se... 42 1.7
22emb|AL512412.7| Human DNA sequence from clone RP11-49H10 on chro... 42 1.7
23gb|AC010809.10| Homo sapiens, clone RP11-3D4, complete sequence 42 1.7
24ref|NM_120356.2| Arabidopsis thaliana unknown protein AT5G02780 ... 40 6.7
25gb|AC140182.2| Mus musculus BAC clone RP24-349I16 from chromosom... 40 6.7
26gb|BC038586.1| Homo sapiens zinc finger protein 490, mRNA (cDNA ... 40 6.7
27ref|NG_000008.6| Homo sapiens cytochrome P450, family 2, subfami... 40 6.7
28ref|NM_020714.1| Homo sapiens zinc finger protein 490 (ZNF490), ... 40 6.7
29gb|BT012424.1| Arabidopsis thaliana At5g02780 mRNA, complete cds 40 6.7
30emb|CT009607.7| Mouse DNA sequence from clone RP23-134I10 on chr... 40 6.7
31gb|AC108830.13| Mus musculus chromosome 8, clone RP23-232G11, co... 40 6.7
32gb|BT010718.1| Arabidopsis thaliana At5g02780 mRNA, complete cds 40 6.7
33gb|AC123826.4| Mus musculus BAC clone RP24-97K3 from chromosome ... 40 6.7
34gb|AC123068.4| Mus musculus BAC clone RP23-21P10 from 1, complet... 40 6.7
35gb|AC140913.25| Medicago truncatula clone mth2-26h9, complete se... 40 6.7
36gb|AC161594.3| Mus musculus BAC clone RP24-153G11 from chromosom... 40 6.7
37emb|AL513124.9| Human DNA sequence from clone RP11-401G5 on chro... 40 6.7
38emb|AL117336.22|HSA324I22 Human DNA sequence from clone RP11-324... 40 6.7
39gb|AE014276.1| Streptococcus agalactiae 2603V/R section 86 of 10... 40 6.7
40gb|AC155276.3| Mus musculus BAC clone RP23-26E18 from chromosome... 40 6.7
41gb|AC010422.7| Homo sapiens chromosome 19 clone CTD-2192J16, com... 40 6.7
42gb|AC155816.3| Mus musculus BAC clone RP23-435J8 from chromosome... 40 6.7
43gb|AC023172.1|AC023172 Homo sapiens chromosome 19, cosmid F22376... 40 6.7
44emb|BX855618.7| Zebrafish DNA sequence from clone CH211-69H5 in ... 40 6.7
45gb|AC103618.6| Mus musculus chromosome 1, clone RP24-202B6, comp... 40 6.7
46gb|DQ298753.1| Homo sapiens cytochrome P450, family 2, subfamily... 40 6.7
47gb|AC151905.4| Mus musculus BAC clone RP23-205J22 from chromosom... 40 6.7
48emb|AL591946.14| Mouse DNA sequence from clone RP23-290M7 on chr... 40 6.7
49dbj|AB033024.1| Homo sapiens mRNA for KIAA1198 protein, partial cds 40 6.7
50emb|AL671905.4| Mouse DNA sequence from clone RP23-239H22 on chr... 40 6.7 
>ref|XM_493844.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1006

 Score =  252 bits (127), Expect = 9e-64
 Identities = 205/231 (88%)
 Strand = Plus / Minus

                                                                       
Query: 265 gttcatgcttggtcatatcttcactcaatcccaagccgcttctttgtgtgttgaagcaga 324
           |||||| |||||||| |||||||  |||||||||| |||||||||||||||| ||||| |
Sbjct: 755 gttcatccttggtcacatcttcaggcaatcccaagacgcttctttgtgtgttcaagcaaa 696

                                                                       
Query: 325 aattgtgggtccagcttcgtttgtgtgtatgcatcgatcttgttcacttcctcgatgaat 384
           || ||||||||| | || |||| ||| || ||||  ||||||||||||||||||||||||
Sbjct: 695 aactgtgggtcctgtttggtttctgtataggcatgaatcttgttcacttcctcgatgaat 636

                                                                       
Query: 385 ttctgaatgttaggtctgtccttggtgatatcatagttttttataccagaaaagaatatc 444
           ||||||| ||| |||| | ||||||||||||| ||||| |||||||||||||||||||||
Sbjct: 635 ttctgaaggttgggtcggcccttggtgatatcgtagttctttataccagaaaagaatatc 576

                                                              
Query: 445 tgaaacctttcgataaatggcacatatgcaatgtccaccaaactgaactgg 495
           ||||||||||| |||||||| ||||| |||||||||||||| |||||||||
Sbjct: 575 tgaaacctttcaataaatggaacatacgcaatgtccaccaagctgaactgg 525
to top
>dbj|AK065887.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013044J05, full
           insert sequence
          Length = 1252

 Score =  252 bits (127), Expect = 9e-64
 Identities = 205/231 (88%)
 Strand = Plus / Minus

                                                                       
Query: 265 gttcatgcttggtcatatcttcactcaatcccaagccgcttctttgtgtgttgaagcaga 324
           |||||| |||||||| |||||||  |||||||||| |||||||||||||||| ||||| |
Sbjct: 928 gttcatccttggtcacatcttcaggcaatcccaagacgcttctttgtgtgttcaagcaaa 869

                                                                       
Query: 325 aattgtgggtccagcttcgtttgtgtgtatgcatcgatcttgttcacttcctcgatgaat 384
           || ||||||||| | || |||| ||| || ||||  ||||||||||||||||||||||||
Sbjct: 868 aactgtgggtcctgtttggtttctgtataggcatgaatcttgttcacttcctcgatgaat 809

                                                                       
Query: 385 ttctgaatgttaggtctgtccttggtgatatcatagttttttataccagaaaagaatatc 444
           ||||||| ||| |||| | ||||||||||||| ||||| |||||||||||||||||||||
Sbjct: 808 ttctgaaggttgggtcggcccttggtgatatcgtagttctttataccagaaaagaatatc 749

                                                              
Query: 445 tgaaacctttcgataaatggcacatatgcaatgtccaccaaactgaactgg 495
           ||||||||||| |||||||| ||||| |||||||||||||| |||||||||
Sbjct: 748 tgaaacctttcaataaatggaacatacgcaatgtccaccaagctgaactgg 698
to top
>dbj|AK061849.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-040-F06, full
           insert sequence
          Length = 1029

 Score =  252 bits (127), Expect = 9e-64
 Identities = 205/231 (88%)
 Strand = Plus / Minus

                                                                       
Query: 265 gttcatgcttggtcatatcttcactcaatcccaagccgcttctttgtgtgttgaagcaga 324
           |||||| |||||||| |||||||  |||||||||| |||||||||||||||| ||||| |
Sbjct: 804 gttcatccttggtcacatcttcaggcaatcccaagacgcttctttgtgtgttcaagcaaa 745

                                                                       
Query: 325 aattgtgggtccagcttcgtttgtgtgtatgcatcgatcttgttcacttcctcgatgaat 384
           || ||||||||| | || |||| ||| || ||||  ||||||||||||||||||||||||
Sbjct: 744 aactgtgggtcctgtttggtttctgtataggcatgaatcttgttcacttcctcgatgaat 685

                                                                       
Query: 385 ttctgaatgttaggtctgtccttggtgatatcatagttttttataccagaaaagaatatc 444
           ||||||| ||| |||| | ||||||||||||| ||||| |||||||||||||||||||||
Sbjct: 684 ttctgaaggttgggtcggcccttggtgatatcgtagttctttataccagaaaagaatatc 625

                                                              
Query: 445 tgaaacctttcgataaatggcacatatgcaatgtccaccaaactgaactgg 495
           ||||||||||| |||||||| ||||| |||||||||||||| |||||||||
Sbjct: 624 tgaaacctttcaataaatggaacatacgcaatgtccaccaagctgaactgg 574
to top
>gb|AY108092.1| Zea mays PCO124824 mRNA sequence
          Length = 658

 Score =  168 bits (85), Expect = 1e-38
 Identities = 175/205 (85%)
 Strand = Plus / Minus

                                                                       
Query: 290 caatcccaagccgcttctttgtgtgttgaagcagaaattgtgggtccagcttcgtttgtg 349
           |||||||||||||||||||||| || | ||| | ||| ||||||||| | || || ||||
Sbjct: 353 caatcccaagccgcttctttgtctgctcaagtaaaaactgtgggtcctgtttagtctgtg 294

                                                                       
Query: 350 tgtatgcatcgatcttgttcacttcctcgatgaatttctgaatgttaggtctgtccttgg 409
           |||||||||| ||||||| ||||||||| ||||| ||||||| ||| |||||| |||| |
Sbjct: 293 tgtatgcatcaatcttgtccacttcctcaatgaacttctgaaggttgggtctgccctttg 234

                                                                       
Query: 410 tgatatcatagttttttataccagaaaagaatatctgaaacctttcgataaatggcacat 469
           | ||||||||||| |||||    ||| |||||||||||||||| ||||| ||||| ||||
Sbjct: 233 taatatcatagttctttatgttggaatagaatatctgaaacctctcgatgaatggtacat 174

                                    
Query: 470 atgcaatgtccaccaaactgaactg 494
           | ||||||||||||| |||||||||
Sbjct: 173 acgcaatgtccaccagactgaactg 149
to top
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  147 bits (74), Expect = 4e-32
 Identities = 101/110 (91%)
 Strand = Plus / Plus

                                                                           
Query: 374     cctcgatgaatttctgaatgttaggtctgtccttggtgatatcatagttttttataccag 433
               |||||||||||||||||| ||| |||| | ||||||||||||| ||||| ||||||||||
Sbjct: 9684963 cctcgatgaatttctgaaggttgggtcggcccttggtgatatcgtagttctttataccag 9685022

                                                                 
Query: 434     aaaagaatatctgaaacctttcgataaatggcacatatgcaatgtccacc 483
               |||||||||||||||||||||| |||||||| ||||| ||||||||||||
Sbjct: 9685023 aaaagaatatctgaaacctttcaataaatggaacatacgcaatgtccacc 9685072



 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 71/83 (85%)
 Strand = Plus / Plus

                                                                           
Query: 294     cccaagccgcttctttgtgtgttgaagcagaaattgtgggtccagcttcgtttgtgtgta 353
               |||||| |||||||||||||||| ||||| ||| ||||||||| | || |||| ||| ||
Sbjct: 9684684 cccaagacgcttctttgtgtgttcaagcaaaaactgtgggtcctgtttggtttctgtata 9684743

                                      
Query: 354     tgcatcgatcttgttcacttcct 376
                ||||  ||||||||||||||||
Sbjct: 9684744 ggcatgaatcttgttcacttcct 9684766



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 112/141 (79%)
 Strand = Plus / Plus

                                                                           
Query: 343     gtttgtgtgtatgcatcgatcttgttcacttcctcgatgaatttctgaatgttaggtctg 402
               |||||||| ||||| |||||  |||| | |||||||||||||||||  | ||| || | |
Sbjct: 9689673 gtttgtgtatatgcttcgattctgttgatttcctcgatgaatttctcgaggttgggccgg 9689732

                                                                           
Query: 403     tccttggtgatatcatagttttttataccagaaaagaatatctgaaacctttcgataaat 462
                | |||||||| || || ||  |||||  |||  || ||||||||| |||||| |||| |
Sbjct: 9689733 ccattggtgatctcgtatttccttatatgagagtagtatatctgaatcctttcaataatt 9689792

                                    
Query: 463     ggcacatatgcaatgtccacc 483
               | |||||| ||||||||||||
Sbjct: 9689793 gtcacatacgcaatgtccacc 9689813
to top
>gb|AC084405.6| Oryza sativa chromosome 3 BAC OSJNBa0044H10 genomic sequence, complete
              sequence
          Length = 165113

 Score =  147 bits (74), Expect = 4e-32
 Identities = 101/110 (91%)
 Strand = Plus / Plus

                                                                          
Query: 374    cctcgatgaatttctgaatgttaggtctgtccttggtgatatcatagttttttataccag 433
              |||||||||||||||||| ||| |||| | ||||||||||||| ||||| ||||||||||
Sbjct: 105862 cctcgatgaatttctgaaggttgggtcggcccttggtgatatcgtagttctttataccag 105921

                                                                
Query: 434    aaaagaatatctgaaacctttcgataaatggcacatatgcaatgtccacc 483
              |||||||||||||||||||||| |||||||| ||||| ||||||||||||
Sbjct: 105922 aaaagaatatctgaaacctttcaataaatggaacatacgcaatgtccacc 105971



 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 71/83 (85%)
 Strand = Plus / Plus

                                                                          
Query: 294    cccaagccgcttctttgtgtgttgaagcagaaattgtgggtccagcttcgtttgtgtgta 353
              |||||| |||||||||||||||| ||||| ||| ||||||||| | || |||| ||| ||
Sbjct: 105583 cccaagacgcttctttgtgtgttcaagcaaaaactgtgggtcctgtttggtttctgtata 105642

                                     
Query: 354    tgcatcgatcttgttcacttcct 376
               ||||  ||||||||||||||||
Sbjct: 105643 ggcatgaatcttgttcacttcct 105665



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 112/141 (79%)
 Strand = Plus / Plus

                                                                          
Query: 343    gtttgtgtgtatgcatcgatcttgttcacttcctcgatgaatttctgaatgttaggtctg 402
              |||||||| ||||| |||||  |||| | |||||||||||||||||  | ||| || | |
Sbjct: 110572 gtttgtgtatatgcttcgattctgttgatttcctcgatgaatttctcgaggttgggccgg 110631

                                                                          
Query: 403    tccttggtgatatcatagttttttataccagaaaagaatatctgaaacctttcgataaat 462
               | |||||||| || || ||  |||||  |||  || ||||||||| |||||| |||| |
Sbjct: 110632 ccattggtgatctcgtatttccttatatgagagtagtatatctgaatcctttcaataatt 110691

                                   
Query: 463    ggcacatatgcaatgtccacc 483
              | |||||| ||||||||||||
Sbjct: 110692 gtcacatacgcaatgtccacc 110712
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score =  147 bits (74), Expect = 4e-32
 Identities = 101/110 (91%)
 Strand = Plus / Plus

                                                                           
Query: 374     cctcgatgaatttctgaatgttaggtctgtccttggtgatatcatagttttttataccag 433
               |||||||||||||||||| ||| |||| | ||||||||||||| ||||| ||||||||||
Sbjct: 9683084 cctcgatgaatttctgaaggttgggtcggcccttggtgatatcgtagttctttataccag 9683143

                                                                 
Query: 434     aaaagaatatctgaaacctttcgataaatggcacatatgcaatgtccacc 483
               |||||||||||||||||||||| |||||||| ||||| ||||||||||||
Sbjct: 9683144 aaaagaatatctgaaacctttcaataaatggaacatacgcaatgtccacc 9683193



 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 71/83 (85%)
 Strand = Plus / Plus

                                                                           
Query: 294     cccaagccgcttctttgtgtgttgaagcagaaattgtgggtccagcttcgtttgtgtgta 353
               |||||| |||||||||||||||| ||||| ||| ||||||||| | || |||| ||| ||
Sbjct: 9682805 cccaagacgcttctttgtgtgttcaagcaaaaactgtgggtcctgtttggtttctgtata 9682864

                                      
Query: 354     tgcatcgatcttgttcacttcct 376
                ||||  ||||||||||||||||
Sbjct: 9682865 ggcatgaatcttgttcacttcct 9682887



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 112/141 (79%)
 Strand = Plus / Plus

                                                                           
Query: 343     gtttgtgtgtatgcatcgatcttgttcacttcctcgatgaatttctgaatgttaggtctg 402
               |||||||| ||||| |||||  |||| | |||||||||||||||||  | ||| || | |
Sbjct: 9687794 gtttgtgtatatgcttcgattctgttgatttcctcgatgaatttctcgaggttgggccgg 9687853

                                                                           
Query: 403     tccttggtgatatcatagttttttataccagaaaagaatatctgaaacctttcgataaat 462
                | |||||||| || || ||  |||||  |||  || ||||||||| |||||| |||| |
Sbjct: 9687854 ccattggtgatctcgtatttccttatatgagagtagtatatctgaatcctttcaataatt 9687913

                                    
Query: 463     ggcacatatgcaatgtccacc 483
               | |||||| ||||||||||||
Sbjct: 9687914 gtcacatacgcaatgtccacc 9687934
to top
>gb|AY111952.1| Zea mays CL5438_1 mRNA sequence
          Length = 1008

 Score =  147 bits (74), Expect = 4e-32
 Identities = 171/205 (83%)
 Strand = Plus / Minus

                                                                       
Query: 290 caatcccaagccgcttctttgtgtgttgaagcagaaattgtgggtccagcttcgtttgtg 349
           |||||||||||||||||||||| || | ||||      || |||||||| || || ||||
Sbjct: 744 caatcccaagccgcttctttgtttgctcaagcnnnnnctgcgggtccagtttagtctgtg 685

                                                                       
Query: 350 tgtatgcatcgatcttgttcacttcctcgatgaatttctgaatgttaggtctgtccttgg 409
           |||| ||||||||||||||||||||||||||||||||||||| ||| |||||| |||| |
Sbjct: 684 tgtacgcatcgatcttgttcacttcctcgatgaatttctgaaggttgggtctgccctttg 625

                                                                       
Query: 410 tgatatcatagttttttataccagaaaagaatatctgaaacctttcgataaatggcacat 469
           |||| |||||||| |||||    ||| ||| |||||||| ||| ||||| || || ||||
Sbjct: 624 tgatgtcatagttctttatggtggaatagagtatctgaagcctctcgatgaacggtacat 565

                                    
Query: 470 atgcaatgtccaccaaactgaactg 494
           | |||| |||||||| |||||||||
Sbjct: 564 acgcaacgtccaccagactgaactg 540
to top
>ref|XM_493845.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 796

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 114/143 (79%)
 Strand = Plus / Minus

                                                                       
Query: 343 gtttgtgtgtatgcatcgatcttgttcacttcctcgatgaatttctgaatgttaggtctg 402
           |||||||| ||||| |||||  |||| | |||||||||||||||||  | ||| || | |
Sbjct: 702 gtttgtgtatatgcttcgattctgttgatttcctcgatgaatttctcgaggttgggccgg 643

                                                                       
Query: 403 tccttggtgatatcatagttttttataccagaaaagaatatctgaaacctttcgataaat 462
            | |||||||| || || ||  |||||  |||  || ||||||||| |||||| |||| |
Sbjct: 642 ccattggtgatctcgtatttccttatatgagagtagtatatctgaatcctttcaataatt 583

                                  
Query: 463 ggcacatatgcaatgtccaccaa 485
           | |||||| ||||||||||||||
Sbjct: 582 gtcacatacgcaatgtccaccaa 560
to top
>gb|AF237487.2|AF237487 Oryza sativa XIG mRNA, complete cds
          Length = 1058

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 114/143 (79%)
 Strand = Plus / Minus

                                                                       
Query: 343 gtttgtgtgtatgcatcgatcttgttcacttcctcgatgaatttctgaatgttaggtctg 402
           |||||||| ||||| |||||  |||| | |||||||||||||||||  | ||| || | |
Sbjct: 703 gtttgtgtatatgcttcgattctgttgatttcctcgatgaatttctcgaggttgggccgg 644

                                                                       
Query: 403 tccttggtgatatcatagttttttataccagaaaagaatatctgaaacctttcgataaat 462
            | |||||||| || || ||  |||||  |||  || ||||||||| |||||| |||| |
Sbjct: 643 ccattggtgatctcgtatttccttatatgagagtagtatatctgaatcctttcaataatt 584

                                  
Query: 463 ggcacatatgcaatgtccaccaa 485
           | |||||| ||||||||||||||
Sbjct: 583 gtcacatacgcaatgtccaccaa 561
to top
>gb|DQ450070.1| Arachis hypogaea clone 7A4R17G putative IN2-1 protein mRNA, partial
           cds
          Length = 625

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 38/42 (90%)
 Strand = Plus / Minus

                                                     
Query: 343 gtttgtgtgtatgcatcgatcttgttcacttcctcgatgaat 384
           |||||||| |||||||| ||||||||||| ||||| ||||||
Sbjct: 356 gtttgtgtatatgcatcaatcttgttcacctcctcaatgaat 315
to top
>gb|DQ294619.1| Arachis hypogaea IN2-1 protein-like mRNA, partial sequence
          Length = 425

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 38/42 (90%)
 Strand = Plus / Minus

                                                     
Query: 343 gtttgtgtgtatgcatcgatcttgttcacttcctcgatgaat 384
           |||||||| |||||||| ||||||||||| ||||| ||||||
Sbjct: 388 gtttgtgtatatgcatcaatcttgttcacctcctcaatgaat 347
to top
>gb|AY809335.1| Schistosoma japonicum SJCHGC08687 protein mRNA, partial cds
          Length = 778

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 7   ttcaaaaaataagcattcaacaagta 32
           ||||||||||||||| ||||||||||
Sbjct: 375 ttcaaaaaataagcactcaacaagta 400
to top
>emb|CT009696.9| Mouse DNA sequence from clone RP23-11B13 on chromosome 9, complete
              sequence
          Length = 196093

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 157    tagcatgcatctttttattcat 178
              ||||||||||||||||||||||
Sbjct: 120526 tagcatgcatctttttattcat 120547
to top
>emb|AL355816.14| Human DNA sequence from clone RP5-1180E21 on chromosome 1 Contains a
             gene for a novel protein (DKFZp313E1815), a gene for
             choline/ethanolaminephosphotransferase (CEPT1), a gene
             (FLJ22457) for a novel protein, the 5' end of a novel
             transcript (DKFZp313J1722) and a CpG island, complete
             sequence
          Length = 141686

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 410   tgatatcatagttttttatacc 431
             ||||||||||||||||||||||
Sbjct: 37946 tgatatcatagttttttatacc 37925
to top
>emb|CR626576.1| full-length cDNA clone CS0DI006YB10 of Placenta Cot 25-normalized of
            Homo sapiens (human)
          Length = 1243

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 410  tgatatcatagttttttatacc 431
            ||||||||||||||||||||||
Sbjct: 1032 tgatatcatagttttttatacc 1053
to top
>emb|CR613969.1| full-length cDNA clone CS0DI042YD14 of Placenta Cot 25-normalized of
            Homo sapiens (human)
          Length = 1726

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 410  tgatatcatagttttttatacc 431
            ||||||||||||||||||||||
Sbjct: 1187 tgatatcatagttttttatacc 1208
to top
>emb|CR607093.1| full-length cDNA clone CS0DI013YN23 of Placenta Cot 25-normalized of
            Homo sapiens (human)
          Length = 1855

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 410  tgatatcatagttttttatacc 431
            ||||||||||||||||||||||
Sbjct: 1292 tgatatcatagttttttatacc 1313
to top
>emb|AL833098.1|HSM804409 Homo sapiens mRNA; cDNA DKFZp313E1815 (from clone DKFZp313E1815)
          Length = 1937

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 410  tgatatcatagttttttatacc 431
            ||||||||||||||||||||||
Sbjct: 1677 tgatatcatagttttttatacc 1698
to top
>gb|AC135230.8| Medicago truncatula clone mth2-23e14, complete sequence
          Length = 124972

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 32    acacaacacaagatgatgttc 52
             |||||||||||||||||||||
Sbjct: 93384 acacaacacaagatgatgttc 93364
to top
>gb|AC137829.23| Medicago truncatula clone mth2-34j5, complete sequence
          Length = 127295

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 32    acacaacacaagatgatgttc 52
             |||||||||||||||||||||
Sbjct: 33097 acacaacacaagatgatgttc 33117
to top
>emb|AL512412.7| Human DNA sequence from clone RP11-49H10 on chromosome 1 Contains the
             3' end of the SMYD3 gene for SET and MYND domain
             containing 3 and a CpG island, complete sequence
          Length = 85198

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 9     caaaaaataagcattcaacaa 29
             |||||||||||||||||||||
Sbjct: 80753 caaaaaataagcattcaacaa 80733
to top
>gb|AC010809.10| Homo sapiens, clone RP11-3D4, complete sequence
          Length = 173087

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 228   tctccatcttccatgctgcag 248
             |||||||||||||||||||||
Sbjct: 54117 tctccatcttccatgctgcag 54137
to top
>ref|NM_120356.2| Arabidopsis thaliana unknown protein AT5G02780 mRNA, complete cds
          Length = 812

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                               
Query: 453 ttcgataaatggcacatatgcaatgtccaccaaact 488
           |||||||||||| | ||||||||| || ||||||||
Sbjct: 555 ttcgataaatgggatatatgcaatatcaaccaaact 520
to top
>gb|AC140182.2| Mus musculus BAC clone RP24-349I16 from chromosome 8, complete sequence
          Length = 151221

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 418   tagttttttataccagaaaa 437
             ||||||||||||||||||||
Sbjct: 85488 tagttttttataccagaaaa 85507
to top
>gb|BC038586.1| Homo sapiens zinc finger protein 490, mRNA (cDNA clone MGC:46699
           IMAGE:5587423), complete cds
          Length = 6372

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 311 tgtgttgaagcagaaattgt 330
           ||||||||||||||||||||
Sbjct: 33  tgtgttgaagcagaaattgt 52
to top
>ref|NG_000008.6| Homo sapiens cytochrome P450, family 2, subfamily A (CYP2A) on chromosome
              19
          Length = 413528

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 322    agaaattgtgggtccagctt 341
              ||||||||||||||||||||
Sbjct: 214916 agaaattgtgggtccagctt 214897
to top
>ref|NM_020714.1| Homo sapiens zinc finger protein 490 (ZNF490), mRNA
          Length = 6372

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 311 tgtgttgaagcagaaattgt 330
           ||||||||||||||||||||
Sbjct: 33  tgtgttgaagcagaaattgt 52
to top
>gb|BT012424.1| Arabidopsis thaliana At5g02780 mRNA, complete cds
          Length = 714

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                               
Query: 453 ttcgataaatggcacatatgcaatgtccaccaaact 488
           |||||||||||| | ||||||||| || ||||||||
Sbjct: 555 ttcgataaatgggatatatgcaatatcaaccaaact 520
to top
>emb|CT009607.7| Mouse DNA sequence from clone RP23-134I10 on chromosome 17, complete
             sequence
          Length = 195995

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 421   ttttttataccagaaaagaa 440
             ||||||||||||||||||||
Sbjct: 86840 ttttttataccagaaaagaa 86821
to top
>gb|AC108830.13| Mus musculus chromosome 8, clone RP23-232G11, complete sequence
          Length = 200841

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 258    ggcctctgttcatgcttggtcata 281
              ||||||||| ||||||||||||||
Sbjct: 126645 ggcctctgtacatgcttggtcata 126622
to top
>gb|BT010718.1| Arabidopsis thaliana At5g02780 mRNA, complete cds
          Length = 993

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                               
Query: 453 ttcgataaatggcacatatgcaatgtccaccaaact 488
           |||||||||||| | ||||||||| || ||||||||
Sbjct: 636 ttcgataaatgggatatatgcaatatcaaccaaact 601
to top
>gb|AC123826.4| Mus musculus BAC clone RP24-97K3 from chromosome 8, complete sequence
          Length = 188704

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 418   tagttttttataccagaaaa 437
             ||||||||||||||||||||
Sbjct: 28692 tagttttttataccagaaaa 28711
to top
>gb|AC123068.4| Mus musculus BAC clone RP23-21P10 from 1, complete sequence
          Length = 221464

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 254   ccctggcctctgttcatgct 273
             ||||||||||||||||||||
Sbjct: 82526 ccctggcctctgttcatgct 82507
to top
>gb|AC140913.25| Medicago truncatula clone mth2-26h9, complete sequence
          Length = 124828

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 91    aaacgtgcttaaaatactat 110
             ||||||||||||||||||||
Sbjct: 71551 aaacgtgcttaaaatactat 71532
to top
>gb|AC161594.3| Mus musculus BAC clone RP24-153G11 from chromosome 1, complete sequence
          Length = 180135

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 100   taaaatactataatcacaatcaac 123
             |||||||||||||||| |||||||
Sbjct: 75399 taaaatactataatcaaaatcaac 75422
to top
>emb|AL513124.9| Human DNA sequence from clone RP11-401G5 on chromosome 9 Contains a
             uncharacterized hypothalamus protein HT007 pseudogene,
             complete sequence
          Length = 172766

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 153   ttagtagcatgcatctttttattcatag 180
             ||||| |||||||||||| |||||||||
Sbjct: 53598 ttagttgcatgcatctttatattcatag 53571
to top
>emb|AL117336.22|HSA324I22 Human DNA sequence from clone RP11-324I22 on chromosome 10 Contains the
              3' end of the CREM gene  for cAMP responsive element
              modulator, the 5' end of the gene for cyclin fold protein 1
              (CFP1) (CBCP1), two novel genes, a novel gene containing
              part of FLJ32718 and two CpG islands, complete sequence
          Length = 190690

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 128    taatttattctcaaaaggca 147
              ||||||||||||||||||||
Sbjct: 159413 taatttattctcaaaaggca 159394
to top
>gb|AE014276.1| Streptococcus agalactiae 2603V/R section 86 of 100 of the complete
            genome
          Length = 20741

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 384  tttctgaatgttaggtctgt 403
            ||||||||||||||||||||
Sbjct: 7262 tttctgaatgttaggtctgt 7281
to top
>gb|AC155276.3| Mus musculus BAC clone RP23-26E18 from chromosome 8, complete sequence
          Length = 234359

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 80    ccgcaatcacaaaacgtgct 99
             ||||||||||||||||||||
Sbjct: 28055 ccgcaatcacaaaacgtgct 28074
to top
>gb|AC010422.7| Homo sapiens chromosome 19 clone CTD-2192J16, complete sequence
          Length = 203790

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 311   tgtgttgaagcagaaattgt 330
             ||||||||||||||||||||
Sbjct: 75332 tgtgttgaagcagaaattgt 75351
to top
>gb|AC155816.3| Mus musculus BAC clone RP23-435J8 from chromosome 8, complete sequence
          Length = 207128

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 80     ccgcaatcacaaaacgtgct 99
              ||||||||||||||||||||
Sbjct: 133333 ccgcaatcacaaaacgtgct 133352
to top
>gb|AC023172.1|AC023172 Homo sapiens chromosome 19, cosmid F22376, complete sequence
          Length = 42547

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 322   agaaattgtgggtccagctt 341
             ||||||||||||||||||||
Sbjct: 25647 agaaattgtgggtccagctt 25628
to top
>emb|BX855618.7| Zebrafish DNA sequence from clone CH211-69H5 in linkage group 4,
             complete sequence
          Length = 127818

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 12    aaaataagcattcaacaagt 31
             ||||||||||||||||||||
Sbjct: 54490 aaaataagcattcaacaagt 54471
to top
>gb|AC103618.6| Mus musculus chromosome 1, clone RP24-202B6, complete sequence
          Length = 141016

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 186   tatatactacagtagcaagcaaga 209
             ||||||||||||||||||| ||||
Sbjct: 94102 tatatactacagtagcaaggaaga 94079
to top
>gb|DQ298753.1| Homo sapiens cytochrome P450, family 2, subfamily B, polypeptide 6
             (CYP2B6) gene, complete cds
          Length = 29315

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 322   agaaattgtgggtccagctt 341
             ||||||||||||||||||||
Sbjct: 22053 agaaattgtgggtccagctt 22034
to top
>gb|AC151905.4| Mus musculus BAC clone RP23-205J22 from chromosome 8, complete sequence
          Length = 214760

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 258    ggcctctgttcatgcttggtcata 281
              ||||||||| ||||||||||||||
Sbjct: 150576 ggcctctgtacatgcttggtcata 150599
to top
>emb|AL591946.14| Mouse DNA sequence from clone RP23-290M7 on chromosome 15, complete
              sequence
          Length = 188892

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 251    gttccctggcctctgttcat 270
              ||||||||||||||||||||
Sbjct: 158930 gttccctggcctctgttcat 158911
to top
>dbj|AB033024.1| Homo sapiens mRNA for KIAA1198 protein, partial cds
          Length = 6090

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 311 tgtgttgaagcagaaattgt 330
           ||||||||||||||||||||
Sbjct: 44  tgtgttgaagcagaaattgt 63
to top
>emb|AL671905.4| Mouse DNA sequence from clone RP23-239H22 on chromosome X, complete
            sequence
          Length = 140012

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 213  ctcctgattgtctagtctccatcttcca 240
            ||||||||| ||| ||||||||||||||
Sbjct: 9671 ctcctgattctcttgtctccatcttcca 9644


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,380,999
Number of Sequences: 3902068
Number of extensions: 5380999
Number of successful extensions: 103675
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 103518
Number of HSP's gapped (non-prelim): 156
length of query: 495
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 473
effective length of database: 17,147,199,772
effective search space: 8110625492156
effective search space used: 8110625492156
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top