Clone Name | rbart48h04 |
---|---|
Clone Library Name | barley_pub |
>TPX2_ARATH (O22711) Peroxiredoxin TPx2 (EC 1.11.1.15) (Thioredoxin reductase)| Length = 162 Score = 40.4 bits (93), Expect = 0.001 Identities = 21/33 (63%), Positives = 25/33 (75%) Frame = -1 Query: 407 YALLADDGVVKVLNLEEGGAFTNSSAEDMLKAL 309 +ALL D+ V V N+E GG FT SSAED+LKAL Sbjct: 130 FALLLDNLKVTVANVENGGEFTVSSAEDILKAL 162
>SPEG_BRARE (Q696W0) Striated muscle preferentially expressed protein kinase (EC| 2.7.11.1) Length = 2995 Score = 30.4 bits (67), Expect = 1.0 Identities = 19/55 (34%), Positives = 27/55 (49%) Frame = -2 Query: 397 SPTTASSRCSTSRKAAPSPTAAPRTCSRRSEA*AATPLRPRHARRVIAIGSVRPL 233 SP + ++ S R +P PT P TCS A TP+ P VI + S+ P+ Sbjct: 2602 SPRSYTAPPSIGRSISPVPTYVPATCSL-----APTPVSP----SVIVVSSISPI 2647
>UNC30_CAEEL (P52906) Homeobox protein unc-30 (Uncoordinated protein 30)| Length = 319 Score = 30.0 bits (66), Expect = 1.4 Identities = 14/21 (66%), Positives = 16/21 (76%) Frame = -2 Query: 397 SPTTASSRCSTSRKAAPSPTA 335 SPTTA+SR ST+ AP PTA Sbjct: 257 SPTTATSRFSTAANLAPLPTA 277
>SOX30_MOUSE (Q8CGW4) Transcription factor SOX-30| Length = 782 Score = 30.0 bits (66), Expect = 1.4 Identities = 20/65 (30%), Positives = 28/65 (43%) Frame = -2 Query: 391 TTASSRCSTSRKAAPSPTAAPRTCSRRSEA*AATPLRPRHARRVIAIGSVRPLFPDEGLF 212 +TA +R +TS P A+ TC R + ATP+ H + +G LF F Sbjct: 580 STAHARFATSPIQPPKEYASVSTCPRSTPIPPATPIPHSHVYQPPPLGHPATLFGTPPRF 639 Query: 211 CFVFP 197 F P Sbjct: 640 SFHHP 644
>CJ095_HUMAN (Q9H7T3) Protein C10orf95| Length = 257 Score = 29.3 bits (64), Expect = 2.3 Identities = 20/48 (41%), Positives = 26/48 (54%), Gaps = 2/48 (4%) Frame = -2 Query: 406 TRCSPTTASSRCSTSRKAAPSPTAA-PRTC-SRRSEA*AATPLRPRHA 269 T SP+ A+S C R+A SPT A C + + A AA P +PR A Sbjct: 202 TCASPSAAASSCCRRRRACSSPTTAWSGACGAGPTAATAAQPGKPRSA 249
>PLSB_VIBPA (Q87KN0) Glycerol-3-phosphate acyltransferase (EC 2.3.1.15) (GPAT)| Length = 808 Score = 28.5 bits (62), Expect = 4.0 Identities = 20/63 (31%), Positives = 25/63 (39%) Frame = +1 Query: 55 HGHDRFIVLQKLRKATLHYSVLATAHRGXXXXXXXXXPPLPHRLLLFREKRSKKGLHQET 234 HG D I + R A +H+S A G P LP R +LF + Q Sbjct: 180 HGTDSAIAHKLARVARIHFSRQKLAASG---------PNLPQRQVLFARLLKSPAIEQAI 230 Query: 235 EDE 243 EDE Sbjct: 231 EDE 233
>STUB_DROME (Q05319) Serine proteinase stubble (EC 3.4.21.-) (Protein| stubble-stubbloid) [Contains: Serine proteinase stubble non-catalytic chain; Serine proteinase stubble catalytic chain] Length = 787 Score = 28.5 bits (62), Expect = 4.0 Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 5/56 (8%) Frame = -2 Query: 394 PTTASSRCSTSRKAAPSPTAA-PRTCSRRSEA*AAT----PLRPRHARRVIAIGSV 242 PTTA+S STS ++ +PT P + S S + T P +P H V+A + Sbjct: 448 PTTATSSSSTSTTSSKTPTTTRPISSSSSSSSGIVTSSQRPTQPTHRTPVLATSGI 503
>PLSB_PHOLL (Q7MZB7) Glycerol-3-phosphate acyltransferase (EC 2.3.1.15) (GPAT)| Length = 818 Score = 28.1 bits (61), Expect = 5.2 Identities = 20/63 (31%), Positives = 27/63 (42%) Frame = +1 Query: 55 HGHDRFIVLQKLRKATLHYSVLATAHRGXXXXXXXXXPPLPHRLLLFREKRSKKGLHQET 234 HG D+ I + R A +HYS A G P LP R LF + + K + + Sbjct: 179 HGTDKTIAHKLARVARMHYSRQRLAAVG---------PRLPVRQELFNKLLASKAIEKAV 229 Query: 235 EDE 243 DE Sbjct: 230 SDE 232
>KLF4_MOUSE (Q60793) Krueppel-like factor 4 (Gut-enriched krueppel-like factor)| (Epithelial zinc-finger protein EZF) Length = 474 Score = 28.1 bits (61), Expect = 5.2 Identities = 12/25 (48%), Positives = 17/25 (68%) Frame = -2 Query: 391 TTASSRCSTSRKAAPSPTAAPRTCS 317 TT++S S+S A+ P +AP TCS Sbjct: 113 TTSASASSSSSPASSGPASAPSTCS 137
>CHLI_CHLRE (Q94FT3) Magnesium-chelatase subunit chlI, chloroplast precursor| (EC 6.6.1.1) (Mg-protoporphyrin IX chelatase) Length = 417 Score = 28.1 bits (61), Expect = 5.2 Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 3/55 (5%) Frame = -2 Query: 382 SSRCSTSRKAAP---SPTAAPRTCSRRSEA*AATPLRPRHARRVIAIGSVRPLFP 227 SS+ ++S + AP +P AA R A AAT ++ R +G RP+FP Sbjct: 27 SSKVASSARVAPFQGAPVAAQRAALLVRAA-AATEVKAAEGRTGKELGQARPIFP 80
>NAS32_CAEEL (O16977) Zinc metalloproteinase nas-32 precursor (EC 3.4.24.21)| (Nematode astacin 32) Length = 651 Score = 27.7 bits (60), Expect = 6.8 Identities = 13/35 (37%), Positives = 21/35 (60%) Frame = -2 Query: 406 TRCSPTTASSRCSTSRKAAPSPTAAPRTCSRRSEA 302 +R + TTA++ ST + +PT +PR +SEA Sbjct: 69 SRINSTTAATPTSTVTTSTSAPTTSPRVYKLKSEA 103
>CHEB2_PSE14 (Q48GG6) Chemotaxis response regulator protein-glutamate| methylesterase 2 (EC 3.1.1.61) Length = 387 Score = 27.7 bits (60), Expect = 6.8 Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 1/52 (1%) Frame = -2 Query: 397 SPTTASSRCSTSRKAAPSPTAAPRTCSRRSEA*AATPLRP-RHARRVIAIGS 245 +PTTA +R +R AAP+ AP + + A T P R A +++AIG+ Sbjct: 161 APTTAPARAVPTRTAAPA--TAPAAHAHHAPAHPTTSGTPKRKAYKLVAIGT 210
>GLTL2_HUMAN (Q8N3T1) Polypeptide N-acetylgalactosaminyltransferase-like protein| 2 (EC 2.4.1.41) (Protein-UDP acetylgalactosaminyltransferase-like protein 2) (UDP-GalNAc:polypeptide N-acetylgalactosaminyltransferase-like protein 2) (Polypeptide GalNAc tra Length = 639 Score = 27.7 bits (60), Expect = 6.8 Identities = 13/26 (50%), Positives = 16/26 (61%), Gaps = 1/26 (3%) Frame = -3 Query: 303 PEPRHPSALAM-PVESSPSARFVLCF 229 PE RHP L P +S P+A +LCF Sbjct: 174 PEVRHPLCLQQHPQDSLPTASVILCF 199
>UL49_BHV1C (P30022) Tegument protein UL49 homolog| Length = 258 Score = 27.3 bits (59), Expect = 8.9 Identities = 23/67 (34%), Positives = 30/67 (44%), Gaps = 9/67 (13%) Frame = -2 Query: 406 TRCSPTTASSRCSTSRKAAPSPTAAP---------RTCSRRSEA*AATPLRPRHARRVIA 254 T +P A +R S+SR ++ P AA R S + A A P RPR A Sbjct: 82 TVAAPAAAPARRSSSRASSRPPRAAADPPVLRPATRGSSGGAGAVAVGPPRPRAPPGANA 141 Query: 253 IGSVRPL 233 + S RPL Sbjct: 142 VASGRPL 148
>H12_VOLCA (Q08865) Histone H1-II| Length = 240 Score = 27.3 bits (59), Expect = 8.9 Identities = 14/43 (32%), Positives = 23/43 (53%) Frame = -2 Query: 364 SRKAAPSPTAAPRTCSRRSEA*AATPLRPRHARRVIAIGSVRP 236 ++KA P AAP+ + +A AATP + + A A + +P Sbjct: 178 AKKATPKKAAAPKKAAAPKKAKAATPKKAKAATPKKAKAAAKP 220
>CHEB1_PSEPU (O52262) Chemotaxis response regulator protein-glutamate| methylesterase of group 1 operon (EC 3.1.1.61) Length = 374 Score = 27.3 bits (59), Expect = 8.9 Identities = 15/51 (29%), Positives = 25/51 (49%) Frame = -2 Query: 397 SPTTASSRCSTSRKAAPSPTAAPRTCSRRSEA*AATPLRPRHARRVIAIGS 245 +P ASS S A+P+P T + A + +P R +++AIG+ Sbjct: 147 APVPASSPAPASSFASPAPARPAATARAAAPAASHSPAPKRKPYKLVAIGT 197 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 48,358,781 Number of Sequences: 219361 Number of extensions: 789266 Number of successful extensions: 2843 Number of sequences better than 10.0: 16 Number of HSP's better than 10.0 without gapping: 2731 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2839 length of database: 80,573,946 effective HSP length: 111 effective length of database: 56,224,875 effective search space used: 1349397000 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)