ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart48h02
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ASO_CUCMA (P24792) L-ascorbate oxidase precursor (EC 1.10.3.3) (... 50 1e-06
2ASO_CUCPM (P37064) L-ascorbate oxidase (EC 1.10.3.3) (Ascorbase)... 50 1e-06
3ASO_TOBAC (Q40588) L-ascorbate oxidase precursor (EC 1.10.3.3) (... 47 1e-05
4ASO_CUCSA (P14133) L-ascorbate oxidase precursor (EC 1.10.3.3) (... 47 1e-05
5PRIA_LENED (Q01200) Protein priA precursor 30 1.4
6YD506_YEAST (Q04399) Putative multicopper oxidase YDR506C (EC 1.... 30 1.8
7Y1282_METJA (Q58678) Hypothetical UPF0252 protein MJ1282 28 4.0
8CYB_MYOYA (Q7Y8K8) Cytochrome b 28 6.9
9P2Y13_HUMAN (Q9BPV8) P2Y purinoceptor 13 (P2Y13) (G-protein coup... 27 9.0
10P2Y13_MACFA (Q9BE53) P2Y purinoceptor 13 (P2Y13) (G-protein coup... 27 9.0

>ASO_CUCMA (P24792) L-ascorbate oxidase precursor (EC 1.10.3.3) (Ascorbase)|
           (ASO)
          Length = 579

 Score = 50.4 bits (119), Expect = 1e-06
 Identities = 19/33 (57%), Positives = 24/33 (72%)
 Frame = -3

Query: 398 HCHIEAHFFMGMGVAFEEGIERVGKLPEEITRC 300
           HCHIE H  MGMGV F EG+E+VG++P +   C
Sbjct: 536 HCHIEPHLHMGMGVVFAEGVEKVGRIPTKALAC 568



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>ASO_CUCPM (P37064) L-ascorbate oxidase (EC 1.10.3.3) (Ascorbase) (ASO)|
          Length = 552

 Score = 50.4 bits (119), Expect = 1e-06
 Identities = 19/33 (57%), Positives = 24/33 (72%)
 Frame = -3

Query: 398 HCHIEAHFFMGMGVAFEEGIERVGKLPEEITRC 300
           HCHIE H  MGMGV F EG+E+VG++P +   C
Sbjct: 506 HCHIEPHLHMGMGVVFAEGVEKVGRIPTKALAC 538



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>ASO_TOBAC (Q40588) L-ascorbate oxidase precursor (EC 1.10.3.3) (Ascorbase)|
           (ASO)
          Length = 578

 Score = 47.0 bits (110), Expect = 1e-05
 Identities = 19/33 (57%), Positives = 22/33 (66%)
 Frame = -3

Query: 398 HCHIEAHFFMGMGVAFEEGIERVGKLPEEITRC 300
           HCHIE H  MGMGV F EG+  V K+P+E   C
Sbjct: 533 HCHIEPHLHMGMGVIFAEGVHLVKKIPKEALAC 565



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>ASO_CUCSA (P14133) L-ascorbate oxidase precursor (EC 1.10.3.3) (Ascorbase)|
           (ASO)
          Length = 587

 Score = 46.6 bits (109), Expect = 1e-05
 Identities = 19/35 (54%), Positives = 22/35 (62%)
 Frame = -3

Query: 398 HCHIEAHFFMGMGVAFEEGIERVGKLPEEITRCVS 294
           HCHIE H  MGMGV F EG+  VG +P +   C S
Sbjct: 542 HCHIEPHLHMGMGVVFAEGVHMVGMIPPKALACGS 576



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>PRIA_LENED (Q01200) Protein priA precursor|
          Length = 258

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 13/40 (32%), Positives = 18/40 (45%)
 Frame = +1

Query: 280 WPPFLLTQRVISSGSLPTRSMPSSKATPMPMKKCASMWQW 399
           WP    T    S+    T + PSS  T  P  +C++ W W
Sbjct: 96  WPTSTPTPTPSSAHHTSTHTSPSSTPTSTPPPQCSNGWDW 135



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>YD506_YEAST (Q04399) Putative multicopper oxidase YDR506C (EC 1.-.-.-)|
          Length = 608

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -3

Query: 398 HCHIEAHFFMGMGVAFE 348
           HCH+E H   G+G+ FE
Sbjct: 530 HCHVEWHMMKGLGIVFE 546



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>Y1282_METJA (Q58678) Hypothetical UPF0252 protein MJ1282|
          Length = 352

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 11/30 (36%), Positives = 20/30 (66%)
 Frame = -3

Query: 104 LRHMLISFSLSLILQHIFQ*ANCWTINHVC 15
           +R +++ F + LILQ+I+     + +NHVC
Sbjct: 1   MRKIILIFFIFLILQNIYAYEKIYDVNHVC 30



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>CYB_MYOYA (Q7Y8K8) Cytochrome b|
          Length = 379

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 4/68 (5%)
 Frame = -1

Query: 196 FFTFNYLFSQTFTVEILSSNSLYFSFGSNRA*GICS----YPFHYL*YYNTFSSEQIVGL 29
           FFTF++LF       ++         GSN   GI S     PFH   YY   + + ++GL
Sbjct: 178 FFTFHFLFPFIVAAMVMVHLLFLHETGSNNPTGIPSNTDMIPFHP--YY---TIKDVLGL 232

Query: 28  LIMYVQII 5
           L+M   ++
Sbjct: 233 LLMITALL 240



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>P2Y13_HUMAN (Q9BPV8) P2Y purinoceptor 13 (P2Y13) (G-protein coupled receptor|
           86) (G-protein coupled receptor 94)
          Length = 333

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = +1

Query: 322 SLPTRSMPSSKATPMPMKKCASM 390
           SLP   + + +ATP  +KKCAS+
Sbjct: 154 SLPNMILSNKEATPSSVKKCASL 176



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>P2Y13_MACFA (Q9BE53) P2Y purinoceptor 13 (P2Y13) (G-protein coupled receptor|
           86) (Fragment)
          Length = 245

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = +1

Query: 322 SLPTRSMPSSKATPMPMKKCASM 390
           SLP   + + +ATP  +KKCAS+
Sbjct: 66  SLPNMILSNKEATPSSVKKCASL 88


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 42,480,559
Number of Sequences: 219361
Number of extensions: 678774
Number of successful extensions: 1938
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1925
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1938
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 1365190992
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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