ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart48g11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC007650.7|AC007650 Drosophila melanogaster, chromosome 3R, r... 48 0.017
2gb|AE003702.3| Drosophila melanogaster chromosome 3R, section 40... 48 0.017
3gb|AC121869.2| Mus musculus BAC clone RP24-121C10 from 17, compl... 46 0.066
4gb|AY550450.1| Salmo salar clone Hae342 microsatellite sequence 44 0.26
5gb|AC010015.5| Drosophila melanogaster 3L BAC RP98-9C21 (Roswell... 44 0.26
6gb|AC010061.6| Drosophila melanogaster 3L BAC RP98-11F16 (Roswel... 44 0.26
7gb|AE003531.3| Drosophila melanogaster chromosome 3L, section 54... 44 0.26
8gb|AC009388.5| Drosophila melanogaster clone BACR11P22, complete... 42 1.0
9gb|AY491782.1| Euphydryas aurinia clone EA1 microsatellite sequence 42 1.0
10gb|BC066564.1| Danio rerio cDNA clone IMAGE:6967261, partial cds 42 1.0
11gb|AC167969.2| Mus musculus BAC clone RP24-446H24 from chromosom... 42 1.0
12gb|AY333070.1| Drosophila virilis antennapedia (Antp), CG10013 (... 42 1.0
13gb|AC122574.7| Rattus norvegicus 7 BAC CH230-134L8 (Children's H... 42 1.0
14emb|AL162414.11| Human DNA sequence from clone RP11-202G18 on ch... 42 1.0
15gb|AY118611.1| Drosophila melanogaster LP10436 full insert cDNA 42 1.0
16gb|AC116640.4| Homo sapiens BAC clone RP11-579B8 from 4, complet... 42 1.0
17gb|DQ378280.1| Drosophila virilis strain Tucson 15010-1001.10 fo... 42 1.0
18ref|NM_143349.1| Drosophila melanogaster -Tubulin at 97EF CG4869... 42 1.0
19gb|DQ080091.1| Tinca tinca microsatellite MTT-8 sequence 42 1.0
20gb|AC139671.10| Mus musculus chromosome 15, clone RP23-230O9, co... 42 1.0
21gb|AC122406.5| Mus musculus BAC clone RP24-126L14 from chromosom... 42 1.0
22gb|AC105443.3| Homo sapiens chromosome 7 clone RP11-533N5, compl... 42 1.0
23gb|AC009183.5|AC009183 Drosophila melanogaster, chromosome 3R, r... 42 1.0
24gb|AC098853.2| Homo sapiens BAC clone RP11-343D12 from 2, comple... 42 1.0
25gb|AC018643.3|AC018643 Human Chromosome 7 clone RP11-297N5, comp... 42 1.0
26gb|AE003763.3| Drosophila melanogaster chromosome 3R, section 10... 42 1.0
27gb|AE003685.5| Drosophila melanogaster chromosome 3R, section 23... 42 1.0
28emb|CT009687.10| Zebrafish DNA sequence from clone DKEY-5I20 in ... 42 1.0
29gb|AY502050.1| Thaleichthys pacificus microsatellite Tpa127 sequ... 40 4.1
30gb|AC165141.4| Mus musculus BAC clone RP24-535G5 from chromosome... 40 4.1
31gb|AC113328.5| Mus musculus chromosome 3, clone RP23-456E2, comp... 40 4.1
32gb|CP000080.1| Leishmania major strain Friedlin chromosome 29, c... 40 4.1
33emb|CR394540.10| Zebrafish DNA sequence from clone DKEYP-10E10 i... 40 4.1
34gb|AC122923.4| Mus musculus BAC clone RP23-36G5 from 10, complet... 40 4.1
35emb|BX537131.17| Zebrafish DNA sequence from clone CH211-266K2 i... 40 4.1
36emb|CR376804.6| Zebrafish DNA sequence from clone DKEY-42P14 in ... 40 4.1
37gb|AF491780.1| Homo sapiens neuregulin 1 (NRG1) gene, partial cd... 40 4.1
38emb|AL355574.27| Human DNA sequence from clone RP11-432J22 on ch... 40 4.1
39emb|AL355611.11| Human DNA sequence from clone RP11-430K22 on ch... 40 4.1
40emb|AL137781.18| Human DNA sequence from clone RP11-263K14 on ch... 40 4.1
41gb|AC164153.2| Mus musculus chromosome 3, clone RP23-370M4, comp... 40 4.1
42emb|Z92540.1|HS179I15A Human DNA sequence from clone RP1-179I15 ... 40 4.1
43gb|AC158296.6| Mus musculus chromosome 7, clone RP24-78M9, compl... 40 4.1
44emb|AL646096.8| Mouse DNA sequence from clone RP23-176J13 on chr... 40 4.1
45gb|BC045702.1| Homo sapiens cDNA clone IMAGE:5311129 40 4.1
46gb|AC068359.11| Homo sapiens chromosome 8, clone RP11-468C1, com... 40 4.1
47emb|BX248494.25| Zebrafish DNA sequence from clone XXyac-67H7_L,... 40 4.1
48dbj|AK094914.1| Homo sapiens cDNA FLJ37595 fis, clone BRCOC2007864 40 4.1
49dbj|AK056521.1| Homo sapiens cDNA FLJ31959 fis, clone NT2RP7007422 40 4.1
50emb|BX569781.7| Zebrafish DNA sequence from clone DKEY-72L18 in ... 40 4.1
51ref|NM_164742.1| Drosophila melanogaster CG13784-RB, transcript ... 40 4.1
52gb|AC006065.3| Homo sapiens 12q24.2 BAC RPCI11-407A16 (Roswell P... 40 4.1
53gb|AC083977.5| Homo sapiens chromosome 8, clone RP11-317J8, comp... 40 4.1
54gb|AY069857.1| Drosophila melanogaster SD10385 full length cDNA 40 4.1
55gb|S53517.1|S53517S1 S-100 beta subunit [rats, Genomic, 1886 nt,... 40 4.1
56gb|AC091989.3| Homo sapiens chromosome 5 clone RP11-76H13, compl... 40 4.1
57tpg|BK000383.1| TPA: TPA_exp: Homo sapiens neuregulin 1 isoform ... 40 4.1
58emb|BX004882.10| Zebrafish DNA sequence from clone CH211-185C9, ... 40 4.1
59gb|AC012675.5|AC012675 Drosophila melanogaster, chromosome 2L, r... 40 4.1
60gb|AC009733.5|AC009733 Drosophila melanogaster, chromosome 3R, r... 40 4.1
61gb|AC025562.8| Homo sapiens BAC clone RP11-673J15 from 4, comple... 40 4.1
62emb|BX510355.6| Mouse DNA sequence from clone RP23-20E14 on chro... 40 4.1
63dbj|AK129748.1| Homo sapiens cDNA FLJ26237 fis, clone CBR04649, ... 40 4.1
64gb|AC101874.8| Mus musculus chromosome 7, clone RP23-366A20, com... 40 4.1
65gb|AE003616.2| Drosophila melanogaster chromosome 2L, section 25... 40 4.1
66gb|AE003772.2| Drosophila melanogaster chromosome 3R, section 11... 40 4.1
67emb|AL845275.20| Mouse DNA sequence from clone RP23-112F5 on chr... 40 4.1
68gb|AC132435.3| Mus musculus BAC clone RP23-223L12 from 10, compl... 40 4.1
69gb|AC127291.4| Mus musculus BAC clone RP23-365H24 from 8, comple... 40 4.1
70gb|AC131693.5| Mus musculus BAC clone RP23-391D10 from 14, compl... 40 4.1
71emb|CR405701.20| Zebrafish DNA sequence from clone CH211-45M20 i... 40 4.1
72emb|AL626772.10| Mouse DNA sequence from clone RP23-90D4 on chro... 40 4.1
73emb|AL831776.3| Mouse DNA sequence from clone RP23-307M2 on chro... 40 4.1
74gb|AC016586.9| Homo sapiens chromosome 19 clone CTD-2622I13, com... 40 4.1 
>gb|AC007650.7|AC007650 Drosophila melanogaster, chromosome 3R, region 87F-87F, BAC clone
              BACR30G22, complete sequence
          Length = 167912

 Score = 48.1 bits (24), Expect = 0.017
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                          
Query: 1      acacacacactgacgcacacacgcatac 28
              ||||||||||| ||||||||||||||||
Sbjct: 141647 acacacacactcacgcacacacgcatac 141674
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>gb|AE003702.3| Drosophila melanogaster chromosome 3R, section 40 of 118 of the
            complete sequence
          Length = 227413

 Score = 48.1 bits (24), Expect = 0.017
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                        
Query: 1    acacacacactgacgcacacacgcatac 28
            ||||||||||| ||||||||||||||||
Sbjct: 7482 acacacacactcacgcacacacgcatac 7509
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>gb|AC121869.2| Mus musculus BAC clone RP24-121C10 from 17, complete sequence
          Length = 182237

 Score = 46.1 bits (23), Expect = 0.066
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 1     acacacacactgacgcacacacgcata 27
             ||||||||||| |||||||||||||||
Sbjct: 59348 acacacacactcacgcacacacgcata 59322
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>gb|AY550450.1| Salmo salar clone Hae342 microsatellite sequence
          Length = 390

 Score = 44.1 bits (22), Expect = 0.26
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 1   acacacacactgacgcacacac 22
           ||||||||||||||||||||||
Sbjct: 274 acacacacactgacgcacacac 253
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>gb|AC010015.5| Drosophila melanogaster 3L BAC RP98-9C21 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 132655

 Score = 44.1 bits (22), Expect = 0.26
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 1     acacacacactgacgcacacac 22
             ||||||||||||||||||||||
Sbjct: 32758 acacacacactgacgcacacac 32779
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>gb|AC010061.6| Drosophila melanogaster 3L BAC RP98-11F16 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 165318

 Score = 44.1 bits (22), Expect = 0.26
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 1      acacacacactgacgcacacac 22
              ||||||||||||||||||||||
Sbjct: 128844 acacacacactgacgcacacac 128865
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>gb|AE003531.3| Drosophila melanogaster chromosome 3L, section 54 of 83 of the complete
              sequence
          Length = 271869

 Score = 44.1 bits (22), Expect = 0.26
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 1      acacacacactgacgcacacac 22
              ||||||||||||||||||||||
Sbjct: 237295 acacacacactgacgcacacac 237316
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>gb|AC009388.5| Drosophila melanogaster clone BACR11P22, complete sequence
          Length = 172362

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 5     acacactgacgcacacacgca 25
             |||||||||||||||||||||
Sbjct: 99975 acacactgacgcacacacgca 99995
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>gb|AY491782.1| Euphydryas aurinia clone EA1 microsatellite sequence
          Length = 324

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 1  acacacacactgacgcacacacgca 25
          |||||||||| ||||||||||||||
Sbjct: 6  acacacacacggacgcacacacgca 30
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>gb|BC066564.1| Danio rerio cDNA clone IMAGE:6967261, partial cds
          Length = 5902

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 1    acacacacactgacgcacacacgca 25
            |||||||||| ||||||||||||||
Sbjct: 3552 acacacacacagacgcacacacgca 3528
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>gb|AC167969.2| Mus musculus BAC clone RP24-446H24 from chromosome 17, complete
             sequence
          Length = 178774

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 1     acacacacactgacgcacacacgca 25
             |||||||||||||| ||||||||||
Sbjct: 60940 acacacacactgacacacacacgca 60964
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>gb|AY333070.1| Drosophila virilis antennapedia (Antp), CG10013 (CG10013), CG31217
             (CG31217), and ultrabithorax (Ubx) genes, complete cds
          Length = 308092

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 2     cacacacactgacgcacacac 22
             |||||||||||||||||||||
Sbjct: 67443 cacacacactgacgcacacac 67423
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>gb|AC122574.7| Rattus norvegicus 7 BAC CH230-134L8 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 54870

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 1     acacacacactgacgcacacacgca 25
             |||||||||| ||||||||||||||
Sbjct: 45836 acacacacacagacgcacacacgca 45812
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>emb|AL162414.11| Human DNA sequence from clone RP11-202G18 on chromosome 9 Contains a
             novel gene, complete sequence
          Length = 176689

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 1     acacacacactgacgcacacacgca 25
             ||||||||||| |||||||||||||
Sbjct: 65055 acacacacactcacgcacacacgca 65031
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>gb|AY118611.1| Drosophila melanogaster LP10436 full insert cDNA
          Length = 1732

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 5   acacactgacgcacacacgca 25
           |||||||||||||||||||||
Sbjct: 164 acacactgacgcacacacgca 144
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>gb|AC116640.4| Homo sapiens BAC clone RP11-579B8 from 4, complete sequence
          Length = 15294

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 1    acacacacactgacgcacacacgca 25
            |||||||||| ||||||||||||||
Sbjct: 4461 acacacacacagacgcacacacgca 4437
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>gb|DQ378280.1| Drosophila virilis strain Tucson 15010-1001.10 fosmid 43O10, complete
            sequence
          Length = 40809

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 1    acacacacactgacgcacacacgca 25
            |||||||||| ||||||||||||||
Sbjct: 5477 acacacacacagacgcacacacgca 5501
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>ref|NM_143349.1| Drosophila melanogaster -Tubulin at 97EF CG4869-RA (betaTub97EF),
           mRNA
          Length = 1879

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 5   acacactgacgcacacacgca 25
           |||||||||||||||||||||
Sbjct: 164 acacactgacgcacacacgca 144
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>gb|DQ080091.1| Tinca tinca microsatellite MTT-8 sequence
          Length = 222

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 1   acacacacactgacgcacaca 21
           |||||||||||||||||||||
Sbjct: 109 acacacacactgacgcacaca 129
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>gb|AC139671.10| Mus musculus chromosome 15, clone RP23-230O9, complete sequence
          Length = 224181

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 1      acacacacactgacgcacacacgca 25
              |||||||||| ||||||||||||||
Sbjct: 137293 acacacacacagacgcacacacgca 137269
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>gb|AC122406.5| Mus musculus BAC clone RP24-126L14 from chromosome 17, complete sequence
          Length = 161377

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 1      acacacacactgacgcacacacgca 25
              |||||||||||||| ||||||||||
Sbjct: 130094 acacacacactgacacacacacgca 130118
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>gb|AC105443.3| Homo sapiens chromosome 7 clone RP11-533N5, complete sequence
          Length = 185272

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 1      acacacacactgacgcacacacgca 25
              |||||||||| ||||||||||||||
Sbjct: 180192 acacacacacagacgcacacacgca 180216
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>gb|AC009183.5|AC009183 Drosophila melanogaster, chromosome 3R, region 85F-85F, BAC clone
              BACR39F04, complete sequence
          Length = 192055

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 1      acacacacactgacgcacaca 21
              |||||||||||||||||||||
Sbjct: 108901 acacacacactgacgcacaca 108881
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>gb|AC098853.2| Homo sapiens BAC clone RP11-343D12 from 2, complete sequence
          Length = 95180

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 1     acacacacactgacgcacacacgca 25
             |||||||||||||| ||||||||||
Sbjct: 22965 acacacacactgacacacacacgca 22941
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>gb|AC018643.3|AC018643 Human Chromosome 7 clone RP11-297N5, complete sequence
          Length = 198470

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 1     acacacacactgacgcacacacgca 25
             |||||||||| ||||||||||||||
Sbjct: 57568 acacacacacagacgcacacacgca 57592
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>gb|AE003763.3| Drosophila melanogaster chromosome 3R, section 101 of 118 of the
             complete sequence
          Length = 206189

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 5     acacactgacgcacacacgca 25
             |||||||||||||||||||||
Sbjct: 95751 acacactgacgcacacacgca 95771
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>gb|AE003685.5| Drosophila melanogaster chromosome 3R, section 23 of 118 of the complete
              sequence
          Length = 241476

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 1      acacacacactgacgcacaca 21
              |||||||||||||||||||||
Sbjct: 167516 acacacacactgacgcacaca 167496
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>emb|CT009687.10| Zebrafish DNA sequence from clone DKEY-5I20 in linkage group 14, complete
              sequence
          Length = 189137

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 1      acacacacactgacgcacacacgca 25
              |||||||||| ||||||||||||||
Sbjct: 139311 acacacacacagacgcacacacgca 139287
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>gb|AY502050.1| Thaleichthys pacificus microsatellite Tpa127 sequence
          Length = 145

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 1   acacacacactgacgcacacacgcatac 28
           ||||||||||  ||||||||||||||||
Sbjct: 81  acacacacacacacgcacacacgcatac 108
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>gb|AC165141.4| Mus musculus BAC clone RP24-535G5 from chromosome 17, complete sequence
          Length = 187883

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 1     acacacacactgacgcacacacgcatac 28
             |||||||||||||| ||||||| |||||
Sbjct: 44004 acacacacactgacacacacacacatac 43977
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>gb|AC113328.5| Mus musculus chromosome 3, clone RP23-456E2, complete sequence
          Length = 168421

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 1    acacacacactgacgcacacacgcatac 28
            ||||||||||| || |||||||||||||
Sbjct: 8449 acacacacactcactcacacacgcatac 8422
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>gb|CP000080.1| Leishmania major strain Friedlin chromosome 29, complete sequence
          Length = 1212674

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 1      acacacacactgacgcacacacgcatac 28
              ||||||||||  ||||||||||||||||
Sbjct: 154161 acacacacacacacgcacacacgcatac 154134
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>emb|CR394540.10| Zebrafish DNA sequence from clone DKEYP-10E10 in linkage group 21,
              complete sequence
          Length = 159341

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 1      acacacacactgacgcacacacgcatac 28
              ||||||||||| |||||||||| |||||
Sbjct: 117182 acacacacactcacgcacacacacatac 117209
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>gb|AC122923.4| Mus musculus BAC clone RP23-36G5 from 10, complete sequence
          Length = 242112

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 1      acacacacactgacgcacacacgc 24
              |||||||||| |||||||||||||
Sbjct: 219723 acacacacacagacgcacacacgc 219746
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>emb|BX537131.17| Zebrafish DNA sequence from clone CH211-266K2 in linkage group 14,
              complete sequence
          Length = 140171

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 1      acacacacactgacgcacacacgcatac 28
              ||||| ||||| ||||||||||||||||
Sbjct: 125943 acacaaacactcacgcacacacgcatac 125916



 Score = 40.1 bits (20), Expect = 4.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 1      acacacacactgacgcacacacgcatac 28
              ||||| ||||| ||||||||||||||||
Sbjct: 125062 acacaaacactcacgcacacacgcatac 125035
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>emb|CR376804.6| Zebrafish DNA sequence from clone DKEY-42P14 in linkage group 25,
            complete sequence
          Length = 117107

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 1    acacacacactgacgcacacacgcatac 28
            |||||||||||||| ||||||| |||||
Sbjct: 5274 acacacacactgacacacacactcatac 5247
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>gb|AF491780.1| Homo sapiens neuregulin 1 (NRG1) gene, partial cds, alternatively spliced
          Length = 1285452

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 1       acacacacactgacgcacacacgcatac 28
               ||||||||||  ||||||||||||||||
Sbjct: 1118215 acacacacacacacgcacacacgcatac 1118188
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>emb|AL355574.27| Human DNA sequence from clone RP11-432J22 on chromosome 9 Contains the 5'
              end of gene DKFZp434G2311, a novel gene, the GDBR1 gene for
              putative glialblastoma cell differentiation-related, 3' end
              of gene MGC23427 and five CpG islands, complete sequence
          Length = 139653

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 2      cacacacactgacgcacacacgca 25
              ||||||||| ||||||||||||||
Sbjct: 104290 cacacacacagacgcacacacgca 104313
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>emb|AL355611.11| Human DNA sequence from clone RP11-430K22 on chromosome 13 Contains a
             60S ribosomal protein L12 (RPL12) pseudogene and a
             pseudogene similar to part of ribosomal protein S3A
             (RPS3A)(FTE1), complete sequence
          Length = 176939

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 1     acacacacactgacgcacacacgcatac 28
             |||||||||| ||| |||||||||||||
Sbjct: 21082 acacacacacagacacacacacgcatac 21055
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>emb|AL137781.18| Human DNA sequence from clone RP11-263K14 on chromosome 13q22.3-31.3,
              complete sequence
          Length = 147978

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                              
Query: 1      acacacacactgacgcacacacgcatacctaa 32
              ||||||||||  || |||||||||||||||||
Sbjct: 100259 acacacacacacacacacacacgcatacctaa 100228
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>gb|AC164153.2| Mus musculus chromosome 3, clone RP23-370M4, complete sequence
          Length = 187100

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 1     acacacacactgacgcacacacgcatac 28
             ||||||||||| || |||||||||||||
Sbjct: 29904 acacacacactcactcacacacgcatac 29877
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>emb|Z92540.1|HS179I15A Human DNA sequence from clone RP1-179I15 on chromosome 13. Contains a
             novel gene, a mitochondrial import receptor TOM22
             pseudogene, the 5' end of the KL gene for klotho, ESTs,
             STSs and a CpG island, complete sequence
          Length = 146810

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 1     acacacacactgacgcacacacgcatac 28
             |||||||||| ||| |||||||||||||
Sbjct: 91443 acacacacacagacacacacacgcatac 91416
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>gb|AC158296.6| Mus musculus chromosome 7, clone RP24-78M9, complete sequence
          Length = 201897

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 1     acacacacactgacgcacacacgcatac 28
             ||||||||||| |||||||||| |||||
Sbjct: 50616 acacacacactcacgcacacacacatac 50643
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>emb|AL646096.8| Mouse DNA sequence from clone RP23-176J13 on chromosome 11 Contains the
             5' end of the Scpep1 gene for serine carboxypeptidase 1,
             two transcription elongation factor B (SIII) polypeptide 2
             (Tceb2) pseudogenes, four novel genes (incl.
             A930013B10Rik), the Coil gene for coilin, the Trim25 gene
             for tripartite motif protein 25 and the Dgke gene for
             diacylglycerol kinase epsilon, complete sequence
          Length = 171512

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 1     acacacacactgacgcacac 20
             ||||||||||||||||||||
Sbjct: 94125 acacacacactgacgcacac 94144
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>gb|BC045702.1| Homo sapiens cDNA clone IMAGE:5311129
          Length = 1832

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 2   cacacacactgacgcacacacgca 25
           ||||||||| ||||||||||||||
Sbjct: 891 cacacacacagacgcacacacgca 868
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>gb|AC068359.11| Homo sapiens chromosome 8, clone RP11-468C1, complete sequence
          Length = 186457

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 1      acacacacactgacgcacacacgcatac 28
              ||||||||||  ||||||||||||||||
Sbjct: 182735 acacacacacacacgcacacacgcatac 182708
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>emb|BX248494.25| Zebrafish DNA sequence from clone XXyac-67H7_L, complete sequence
          Length = 125031

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 1     acacacacactgacgcacacacgc 24
             |||||||||| |||||||||||||
Sbjct: 83168 acacacacacagacgcacacacgc 83145
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>dbj|AK094914.1| Homo sapiens cDNA FLJ37595 fis, clone BRCOC2007864
          Length = 3487

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 2    cacacacactgacgcacacacgca 25
            ||||||||| ||||||||||||||
Sbjct: 3117 cacacacacagacgcacacacgca 3094
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>dbj|AK056521.1| Homo sapiens cDNA FLJ31959 fis, clone NT2RP7007422
          Length = 3005

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 2    cacacacactgacgcacacacgca 25
            ||||||||| ||||||||||||||
Sbjct: 2635 cacacacacagacgcacacacgca 2612
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>emb|BX569781.7| Zebrafish DNA sequence from clone DKEY-72L18 in linkage group 17,
              complete sequence
          Length = 170138

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 1      acacacacactgacgcacacacgcatac 28
              ||||||||||  ||||||||||||||||
Sbjct: 134078 acacacacacacacgcacacacgcatac 134105
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>ref|NM_164742.1| Drosophila melanogaster CG13784-RB, transcript variant B (CG13784),
           mRNA
          Length = 1332

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 1   acacacacactgacgcacac 20
           ||||||||||||||||||||
Sbjct: 591 acacacacactgacgcacac 572
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>gb|AC006065.3| Homo sapiens 12q24.2 BAC RPCI11-407A16 (Roswell Park Cancer Institute
             Human BAC Library) complete sequence
          Length = 191134

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 1     acacacacactgacgcacacacgcatac 28
             |||||||||| ||| |||||||||||||
Sbjct: 14186 acacacacacagacacacacacgcatac 14213
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>gb|AC083977.5| Homo sapiens chromosome 8, clone RP11-317J8, complete sequence
          Length = 212555

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 1     acacacacactgacgcacacacgcatac 28
             ||||||||||  ||||||||||||||||
Sbjct: 46502 acacacacacacacgcacacacgcatac 46475
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>gb|AY069857.1| Drosophila melanogaster SD10385 full length cDNA
          Length = 1323

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 1   acacacacactgacgcacac 20
           ||||||||||||||||||||
Sbjct: 565 acacacacactgacgcacac 546
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>gb|S53517.1|S53517S1 S-100 beta subunit [rats, Genomic, 1886 nt, segment 1 of 3]
          Length = 1886

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 1   acacacacactgacgcacacacgcatac 28
           ||||||||||| |||||| |||||||||
Sbjct: 145 acacacacactcacgcacgcacgcatac 172
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>gb|AC091989.3| Homo sapiens chromosome 5 clone RP11-76H13, complete sequence
          Length = 168575

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                              
Query: 1      acacacacactgacgcacacacgcatacctaa 32
              ||||||||||  || |||||||||||||||||
Sbjct: 131000 acacacacacacacacacacacgcatacctaa 131031
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>tpg|BK000383.1| TPA: TPA_exp: Homo sapiens neuregulin 1 isoform (NRG1) gene, alternatively
               spliced, complete cds
          Length = 1421559

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 1       acacacacactgacgcacacacgcatac 28
               ||||||||||  ||||||||||||||||
Sbjct: 1118215 acacacacacacacgcacacacgcatac 1118188
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>emb|BX004882.10| Zebrafish DNA sequence from clone CH211-185C9, complete sequence
          Length = 137477

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 1     acacacacactgacgcacacacgcatac 28
             ||||||||||| |||||||||| |||||
Sbjct: 74654 acacacacactcacgcacacactcatac 74681
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>gb|AC012675.5|AC012675 Drosophila melanogaster, chromosome 2L, region 27C-27C, BAC clone
              BACR10E07, complete sequence
          Length = 176818

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 1      acacacacactgacgcacac 20
              ||||||||||||||||||||
Sbjct: 138879 acacacacactgacgcacac 138898
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>gb|AC009733.5|AC009733 Drosophila melanogaster, chromosome 3R, region 99E-99E, BAC clone
             BACR05L15, complete sequence
          Length = 181056

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 1     acacacacactgacgcacac 20
             ||||||||||||||||||||
Sbjct: 52361 acacacacactgacgcacac 52380
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>gb|AC025562.8| Homo sapiens BAC clone RP11-673J15 from 4, complete sequence
          Length = 114360

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 1     acacacacactgacgcacacacgcatac 28
             ||||||||||  ||||||||||||||||
Sbjct: 27890 acacacacacacacgcacacacgcatac 27863
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>emb|BX510355.6| Mouse DNA sequence from clone RP23-20E14 on chromosome X, complete
             sequence
          Length = 57320

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 1     acacacacactgacgcacacacgcatac 28
             ||||||||||  ||||||||||||||||
Sbjct: 17988 acacacacacacacgcacacacgcatac 17961
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>dbj|AK129748.1| Homo sapiens cDNA FLJ26237 fis, clone CBR04649, highly similar to
           Stathmin
          Length = 2820

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 2   cacacacactgacgcacacacgca 25
           ||||||||| ||||||||||||||
Sbjct: 824 cacacacacagacgcacacacgca 801
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>gb|AC101874.8| Mus musculus chromosome 7, clone RP23-366A20, complete sequence
          Length = 179708

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 1      acacacacactgacgcacacacgcatac 28
              ||||||||||| |||||||||| |||||
Sbjct: 152189 acacacacactcacgcacacacacatac 152162
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>gb|AE003616.2| Drosophila melanogaster chromosome 2L, section 25 of 83 of the complete
              sequence
          Length = 267997

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 1      acacacacactgacgcacac 20
              ||||||||||||||||||||
Sbjct: 192104 acacacacactgacgcacac 192123
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>gb|AE003772.2| Drosophila melanogaster chromosome 3R, section 110 of 118 of the complete
              sequence
          Length = 228443

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 1      acacacacactgacgcacac 20
              ||||||||||||||||||||
Sbjct: 121902 acacacacactgacgcacac 121921
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>emb|AL845275.20| Mouse DNA sequence from clone RP23-112F5 on chromosome 2, complete
             sequence
          Length = 227422

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 1     acacacacactgacgcacacacgcatac 28
             |||||||||| ||| |||||||||||||
Sbjct: 34455 acacacacacagacacacacacgcatac 34482
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>gb|AC132435.3| Mus musculus BAC clone RP23-223L12 from 10, complete sequence
          Length = 198383

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 1     acacacacactgacgcacacacgc 24
             |||||||||| |||||||||||||
Sbjct: 40333 acacacacacagacgcacacacgc 40356
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>gb|AC127291.4| Mus musculus BAC clone RP23-365H24 from 8, complete sequence
          Length = 208452

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 1     acacacacactgacgcacacacgcatac 28
             ||||||||||  ||||||||||||||||
Sbjct: 63545 acacacacacacacgcacacacgcatac 63518
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>gb|AC131693.5| Mus musculus BAC clone RP23-391D10 from 14, complete sequence
          Length = 220202

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 1      acacacacactgacgcacacacgcatac 28
              ||||||||||| || |||||||||||||
Sbjct: 118073 acacacacactcactcacacacgcatac 118100
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>emb|CR405701.20| Zebrafish DNA sequence from clone CH211-45M20 in linkage group 5,
             complete sequence
          Length = 125284

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 1     acacacacactgacgcacacacgcatac 28
             ||||||||||  ||||||||||||||||
Sbjct: 86188 acacacacacacacgcacacacgcatac 86161
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>emb|AL626772.10| Mouse DNA sequence from clone RP23-90D4 on chromosome 4, complete
             sequence
          Length = 230614

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 1     acacacacactgacgcacacacgcatac 28
             ||||||||||| |||||||||| |||||
Sbjct: 23088 acacacacactcacgcacacacacatac 23061
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>emb|AL831776.3| Mouse DNA sequence from clone RP23-307M2 on chromosome 4, complete
              sequence
          Length = 204136

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 1      acacacacactgacgcacacacgcatac 28
              |||||||||| ||| |||||||||||||
Sbjct: 131454 acacacacacagacacacacacgcatac 131481
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>gb|AC016586.9| Homo sapiens chromosome 19 clone CTD-2622I13, complete sequence
          Length = 205642

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 2     cacacacactgacgcacacacgca 25
             ||||||||| ||||||||||||||
Sbjct: 78744 cacacacacagacgcacacacgca 78721


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,346,958
Number of Sequences: 3902068
Number of extensions: 2346958
Number of successful extensions: 65934
Number of sequences better than 10.0: 74
Number of HSP's better than 10.0 without gapping: 74
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 65757
Number of HSP's gapped (non-prelim): 177
length of query: 311
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 289
effective length of database: 17,147,199,772
effective search space: 4955540734108
effective search space used: 4955540734108
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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