>PSD4_ARATH (P55034) 26S proteasome non-ATPase regulatory subunit 4 (26S|
           proteasome regulatory subunit S5A) (Multiubiquitin
           chain-binding protein)
          Length = 386

 Score = 50.4 bits (119), Expect = 2e-06
 Identities = 23/45 (51%), Positives = 37/45 (82%)
 Frame = -3

Query: 445 QDAEASGQSDMSKVFEDRSFVTSILNSLPGVDPNDPSVKDLLASL 311
           + +EA+G  +   +  +++F++S+L+SLPGVDPNDP+VK+LLASL
Sbjct: 322 ESSEATGAGN--NLLGNQAFISSVLSSLPGVDPNDPAVKELLASL 364

>PSD4_HUMAN (P55036) 26S proteasome non-ATPase regulatory subunit 4 (26S|
           proteasome regulatory subunit S5A) (Rpn10)
           (Multiubiquitin chain-binding protein) (Antisecretory
           factor 1) (AF) (ASF)
          Length = 377

 Score = 40.8 bits (94), Expect = 0.002
 Identities = 17/50 (34%), Positives = 32/50 (64%)
 Frame = -3

Query: 451 SVQDAEASGQSDMSKVFEDRSFVTSILNSLPGVDPNDPSVKDLLASLHGQ 302
           ++  +E + + D   V +D  F+ S+L +LPGVDPN+ ++++ + SL  Q
Sbjct: 313 AMDTSEPAKEEDDYDVMQDPEFLQSVLENLPGVDPNNEAIRNAMGSLASQ 362

>PSD4_DROME (P55035) 26S proteasome non-ATPase regulatory subunit 4 (26S|
           proteasome regulatory subunit S5A) (Multiubiquitin
           chain-binding protein) (54 kDa subunit of mu particle)
           (p54)
          Length = 396

 Score = 39.3 bits (90), Expect = 0.005
 Identities = 17/37 (45%), Positives = 26/37 (70%)
 Frame = -3

Query: 418 DMSKVFEDRSFVTSILNSLPGVDPNDPSVKDLLASLH 308
           D S+V  D +F+ S+L +LPGVDP   +V+D + SL+
Sbjct: 345 DYSEVIGDPAFLQSVLENLPGVDPQSEAVRDAVGSLN 381

>PSD4_MOUSE (O35226) 26S proteasome non-ATPase regulatory subunit 4 (26S|
           proteasome regulatory subunit S5A) (Rpn10)
           (Multiubiquitin chain-binding protein)
          Length = 376

 Score = 38.1 bits (87), Expect = 0.011
 Identities = 15/41 (36%), Positives = 27/41 (65%)
 Frame = -3

Query: 424 QSDMSKVFEDRSFVTSILNSLPGVDPNDPSVKDLLASLHGQ 302
           + D   V +D  F+ S+L +LPGVDPN+ +++ ++ +L  Q
Sbjct: 321 EEDDYDVMQDPEFLQSVLENLPGVDPNNAAIRSVMGALASQ 361

>PSD4_SCHMA (O17453) 26S proteasome non-ATPase regulatory subunit 4 (26S|
           proteasome regulatory subunit S5A)
          Length = 420

 Score = 28.9 bits (63), Expect = 6.4
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = -3

Query: 406 VFEDRSFVTSILNSLPGVDPNDPSVKDLLASL 311
           V  D  F+ S+L SLPGVD  +  V+  + +L
Sbjct: 367 VMYDAEFLESVLQSLPGVDTQNEDVRKAINAL 398

>GUXC_FUSOX (P46238) Putative exoglucanase type C precursor (EC 3.2.1.91)|
           (Exocellobiohydrolase I) (1,4-beta-cellobiohydrolase)
           (Beta-glucancellobiohydrolase)
          Length = 514

 Score = 28.5 bits (62), Expect = 8.4
 Identities = 13/27 (48%), Positives = 14/27 (51%)
 Frame = +3

Query: 9   ISFTFNKHKCTKNLQHVIT*DKHGGAF 89
           IS  F  H CTK  QH  T D  GG +
Sbjct: 238 ISTAFTPHPCTKLTQHSCTGDSCGGTY 264


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 56,283,936
Number of Sequences: 219361
Number of extensions: 914106
Number of successful extensions: 1984
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1939
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1984
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2851757076
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)