Clone Name | rbart48f12 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | HXK2_HUMAN (P52789) Hexokinase-2 (EC 2.7.1.1) (Hexokinase type I... | 29 | 5.8 | 2 | ERCC5_XENLA (P14629) DNA-repair protein complementing XP-G cells... | 29 | 5.8 | 3 | HXK2_RAT (P27881) Hexokinase-2 (EC 2.7.1.1) (Hexokinase type II)... | 28 | 9.9 | 4 | HXK2_MOUSE (O08528) Hexokinase-2 (EC 2.7.1.1) (Hexokinase type I... | 28 | 9.9 |
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>HXK2_HUMAN (P52789) Hexokinase-2 (EC 2.7.1.1) (Hexokinase type II) (HK II)| (Muscle form hexokinase) Length = 917 Score = 28.9 bits (63), Expect = 5.8 Identities = 24/84 (28%), Positives = 33/84 (39%), Gaps = 11/84 (13%) Frame = -1 Query: 412 QVRNDAKFYPTEEM---GNSYFDHYPDLVEQVTNNTFSKGLALMRGFFFWL---QNSAHE 251 ++ N P E M G+ FDH + KG++L GF F QNS E Sbjct: 554 EMHNKIYAIPQEVMHGTGDELFDHIVQCIADFLEYMGMKGVSLPLGFTFSFPCQQNSLDE 613 Query: 250 DQFRPWTDDLK-----DQDVIPLM 194 WT K +DV+ L+ Sbjct: 614 SILLKWTKGFKASGCEGEDVVTLL 637
>ERCC5_XENLA (P14629) DNA-repair protein complementing XP-G cells homolog| (Xeroderma pigmentosum group G-complementing protein homolog) Length = 1196 Score = 28.9 bits (63), Expect = 5.8 Identities = 17/71 (23%), Positives = 33/71 (46%), Gaps = 4/71 (5%) Frame = -1 Query: 373 MGNSYFDHYPDL----VEQVTNNTFSKGLALMRGFFFWLQNSAHEDQFRPWTDDLKDQDV 206 +G+ Y + P + ++ N +GL + F W + + + RP +D K + Sbjct: 891 LGSDYTEGIPTVGYVSAMEILNEFPGQGLEPLVKFKEWWSEAQKDKKMRPNPNDTKVKKK 950 Query: 205 IPLMDLDYAFP 173 + L+DL +FP Sbjct: 951 LRLLDLQQSFP 961
>HXK2_RAT (P27881) Hexokinase-2 (EC 2.7.1.1) (Hexokinase type II) (HK II)| Length = 917 Score = 28.1 bits (61), Expect = 9.9 Identities = 27/89 (30%), Positives = 34/89 (38%), Gaps = 13/89 (14%) Frame = -1 Query: 421 KLRQVRNDAKFY--PTEEM---GNSYFDHYPDLVEQVTNNTFSKGLALMRGFFFWL---Q 266 K R V K Y P E M G FDH + KG++L GF F Q Sbjct: 549 KRRGVEMHNKIYSIPQEVMHGTGEELFDHIVQCIADFLEYMGMKGVSLPLGFTFSFPCQQ 608 Query: 265 NSAHEDQFRPWTDDLK-----DQDVIPLM 194 NS + WT K +DV+ L+ Sbjct: 609 NSLDQSILLKWTKGFKASGCEGEDVVTLL 637
>HXK2_MOUSE (O08528) Hexokinase-2 (EC 2.7.1.1) (Hexokinase type II) (HK II)| Length = 917 Score = 28.1 bits (61), Expect = 9.9 Identities = 27/89 (30%), Positives = 34/89 (38%), Gaps = 13/89 (14%) Frame = -1 Query: 421 KLRQVRNDAKFY--PTEEM---GNSYFDHYPDLVEQVTNNTFSKGLALMRGFFFWL---Q 266 K R V K Y P E M G FDH + KG++L GF F Q Sbjct: 549 KRRGVEMHNKIYSIPQEVMHGTGEELFDHIVQCIADFLEYMGMKGVSLPLGFTFSFPCQQ 608 Query: 265 NSAHEDQFRPWTDDLK-----DQDVIPLM 194 NS + WT K +DV+ L+ Sbjct: 609 NSLDQSILLKWTKGFKASGCEGEDVVTLL 637 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 64,601,307 Number of Sequences: 219361 Number of extensions: 1297408 Number of successful extensions: 2678 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 2635 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2678 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2570413340 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)