ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart48f08
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|BT008921.1| Triticum aestivum clone wyr1c.pk002.o12:fis, full... 589 e-165
2ref|XM_479756.1| Oryza sativa (japonica cultivar-group), mRNA 244 2e-61
3ref|XM_507097.1| PREDICTED Oryza sativa (japonica cultivar-group... 244 2e-61
4dbj|AB110164.1| Oryza sativa (japonica cultivar-group) mRNA for ... 244 2e-61
5gb|AF429947.1| Oryza sativa putative fructokinase II mRNA, compl... 244 2e-61
6dbj|AK099353.1| Oryza sativa (japonica cultivar-group) cDNA clon... 244 2e-61
7dbj|AK070120.1| Oryza sativa (japonica cultivar-group) cDNA clon... 244 2e-61
8dbj|AK061391.1| Oryza sativa (japonica cultivar-group) cDNA clon... 244 2e-61
9gb|BT016469.1| Zea mays clone Contig302 mRNA sequence 198 1e-47
10gb|AY197773.1| Zea mays fructokinase 2 (frk2) mRNA, complete cds 198 1e-47
11gb|AY112523.1| Zea mays CL966_1 mRNA sequence 198 1e-47
12dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 133 6e-28
13dbj|AP004566.3| Oryza sativa (japonica cultivar-group) genomic D... 133 6e-28
14gb|AF457962.1| Zea mays clone csi1n.pk0029.c8, mRNA sequence 123 5e-25
15gb|AE011951.1| Xanthomonas axonopodis pv. citri str. 306, secti... 56 1e-04
16emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome comple... 50 0.007
17gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome 50 0.007
18ref|XM_483354.1| Oryza sativa (japonica cultivar-group), mRNA 46 0.10
19gb|AE011713.1| Xanthomonas axonopodis pv. citri str. 306, secti... 46 0.10
20dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome 46 0.10
21dbj|AP004622.3| Oryza sativa (japonica cultivar-group) genomic D... 46 0.10
22dbj|AP004708.3| Oryza sativa (japonica cultivar-group) genomic D... 46 0.10
23dbj|AK063287.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.10
24ref|XM_633632.1| Dictyostelium discoideum hypothetical protein (... 44 0.41
25ref|XM_706960.1| Candida albicans SC5314 hypothetical protein (C... 44 0.41
26ref|XM_706939.1| Candida albicans SC5314 hypothetical protein (C... 44 0.41
27dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete ... 44 0.41
28gb|DQ230532.1| Streptomyces sp. Tu6071 phenalinolactone biosynth... 44 0.41
29gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 44 0.41
30emb|AL132709.5|CNS01DTB Human chromosome 14 DNA sequence BAC R-9... 44 0.41
31gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete ... 42 1.6
32ref|XM_868360.1| PREDICTED: Bos taurus similar to 5-hydroxytrypt... 42 1.6
33gb|AC024823.2| Caenorhabditis elegans cosmid Y55B1BM, complete s... 42 1.6
34gb|AY344643.1| Cavia porcellus serotonin receptor (5HT1E) mRNA, ... 42 1.6
35gb|AY197772.1| Zea mays fructokinase 1 (frk1) mRNA, complete cds 42 1.6
36gb|AC115355.3| Mus musculus BAC clone RP23-14J16 from 9, complet... 42 1.6
37emb|BX572594.1| Rhodopseudomonas palustris CGA009 complete genom... 42 1.6
38gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome 42 1.6
39gb|AC024651.13| Homo sapiens chromosome 15, clone RP11-753A21, c... 42 1.6
40gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, comple... 42 1.6
41gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome 42 1.6
42gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 42 1.6
43gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome 42 1.6
44dbj|BA000001.2| Pyrococcus horikoshii OT3 DNA, complete genome 42 1.6
45dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 42 1.6
46gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome 42 1.6
47gb|AC147565.4| Mus musculus BAC clone RP23-116P18 from 9, comple... 42 1.6
48emb|AL772346.5| Mouse DNA sequence from clone RP23-413E7 on chro... 42 1.6
49ref|NM_102811.1| Arabidopsis thaliana unknown protein AT1G30750 ... 40 6.4
50ref|NM_196736.1| Oryza sativa (japonica cultivar-group) hypothet... 40 6.4
51ref|NM_196065.1| Oryza sativa (japonica cultivar-group) unknown ... 40 6.4
52ref|NM_193931.1| Oryza sativa (japonica cultivar-group), predic... 40 6.4
53ref|XM_361361.1| Magnaporthe grisea 70-15 predicted protein (MG0... 40 6.4
54gb|BC003324.1| Mus musculus cDNA sequence BC003324, mRNA (cDNA c... 40 6.4
55ref|NM_030259.1| Mus musculus cDNA sequence BC003324 (BC003324),... 40 6.4
56gb|AC127339.3| Mus musculus BAC clone RP23-180G16 from chromosom... 40 6.4
57gb|BT012972.1| Lycopersicon esculentum clone 114182R, mRNA sequence 40 6.4
58emb|AJ251914.1|SSC251914 Sus scrofa MHC class I SLA genes, haplo... 40 6.4
59gb|AC127313.3| Mus musculus BAC clone RP23-311A21 from 5, comple... 40 6.4
60emb|X61004.1|KPSCRK K.pneumoniae scrK gene for fructokinase 40 6.4
61emb|AL356632.12| Human DNA sequence from clone RP11-7D5 on chrom... 40 6.4
62emb|AL355133.8| Human DNA sequence from clone RP11-54N6 on chrom... 40 6.4
63gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete ... 40 6.4
64emb|AL138889.9| Human DNA sequence from clone RP3-468B3 on chrom... 40 6.4
65emb|AL121915.8|HSJ1193N1 Human DNA sequence from clone RP5-1193N... 40 6.4
66emb|Z34846.1|SSBAT1G S.scrofa BAT1 gene 40 6.4
67gb|AY113970.1| Arabidopsis thaliana unknown protein (At1g30750) ... 40 6.4
68gb|AY050922.1| Arabidopsis thaliana unknown protein (At1g30750) ... 40 6.4
69emb|AL939118.1|SCO939118 Streptomyces coelicolor A3(2) complete ... 40 6.4
70emb|AL606615.4|OSJN00048 Oryza sativa genomic DNA, chromosome 4,... 40 6.4
71emb|CR855302.6| Zebrafish DNA sequence from clone CH211-120A5 in... 40 6.4
72gb|AC138665.11| Mus musculus chromosome 3, clone RP24-161I8, com... 40 6.4
73gb|AC113416.2| Homo sapiens chromosome 5 clone RP11-560F8, compl... 40 6.4
74gb|AC113380.2| Homo sapiens chromosome 5 clone RP11-304B20, comp... 40 6.4
75gb|AC093181.5| Oryza sativa chromosome 10 BAC OSJNBb0089F16 geno... 40 6.4
76gb|AF351608.1| Sus scrofa CRY (CRY) mRNA, complete cds 40 6.4
77dbj|AK133760.1| Mus musculus 8 days embryo whole body cDNA, RIKE... 40 6.4
78dbj|AK150252.1| Mus musculus bone marrow macrophage cDNA, RIKEN ... 40 6.4
79dbj|AK150123.1| Mus musculus bone marrow macrophage cDNA, RIKEN ... 40 6.4
80gb|DP000042.1| Lemur catta target 106 genomic scaffold 40 6.4
81gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hilde... 40 6.4
82dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.4
83dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.4
84dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.4
85gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome 40 6.4
86gb|AC025907.2|AC025907 Oryza sativa (japonica cultivar-group) ch... 40 6.4
87gb|AY787762.1| Streptomyces filamentosus strain NRRL 11379 dapto... 40 6.4
88gb|AC007060.3|T5I8 Arabidopsis thaliana chromosome 1 BAC T5I8 se... 40 6.4
89ref|NM_213881.1| Sus scrofa CRY protein (CRY), mRNA 40 6.4
90dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome 40 6.4
91dbj|AP003853.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.4
92dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 40 6.4
93dbj|AK121939.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.4
94dbj|AK109451.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.4
95gb|DQ322651.1| Streptomyces sp. FR1 plasmid pFRL1, complete sequ... 40 6.4
96gb|AF080235.1|AF080235 Streptomyces cyanogenus landomycin biosyn... 40 6.4
97gb|AC138585.14| Mus musculus chromosome 3, clone RP23-174P13, co... 40 6.4
98gb|AC115945.9| Mus musculus chromosome 3, clone RP24-555P13, com... 40 6.4
99gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 40 6.4
100gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 6.4
101emb|AM114786.1| Platynereis dumerilii mRNA for Pit1 protein 40 6.4
102emb|AL591782.1|SME591782 Sinorhizobium meliloti 1021 complete ch... 40 6.4
103gb|AF494278.1| Chaetosphaeridium globosum chloroplast, complete ... 40 6.4
104emb|AL845548.7| Mouse DNA sequence from clone RP23-307N14 on chr... 40 6.4
105emb|AL731838.19| Mouse DNA sequence from clone RP23-139O16 on ch... 40 6.4

>gb|BT008921.1| Triticum aestivum clone wyr1c.pk002.o12:fis, full insert mRNA
            sequence
          Length = 1348

 Score =  589 bits (297), Expect = e-165
 Identities = 420/456 (92%), Gaps = 15/456 (3%)
 Strand = Plus / Minus

                                                                        
Query: 29   ttttgataaacttgtccattcat--aagact--gataaattctgggtgaaggctacaaca 84
            ||||||| |||||||||||||||  ||||||  |||||| | ||||||||||||||||||
Sbjct: 1334 ttttgatgaacttgtccattcattaaagactctgataaagtttgggtgaaggctacaaca 1275

                                                                        
Query: 85   accattagcctccttacacaaagacagtaaccaaaatcaccacacatgcttgctttttat 144
            | || |||||||||||||||||||| | ||||||||||||||||||||||||||||||||
Sbjct: 1274 atcagtagcctccttacacaaagaccgcaaccaaaatcaccacacatgcttgctttttat 1215

                                                                        
Query: 145  taagcgcccacgaggtcacacac---tgacacaagaactaaaactcaactcatacctaat 201
            |||||||||||||||||||||||   |||| || |||||||| ||||| |||| ||||||
Sbjct: 1214 taagcgcccacgaggtcacacacacttgactcacgaactaaa-ctcaattcatccctaat 1156

                                                                        
Query: 202  aataa------aagtgcagctaaactcccctaagattcaaccccgacggcgcgacacaag 255
            |||||      |||||||||||||  | |||||||||||||||||| |||||||||||| 
Sbjct: 1155 aataataataaaagtgcagctaaaa-ctcctaagattcaaccccgatggcgcgacacaat 1097

                                                                        
Query: 256  gcgtctctagttgctgcccttgctgatgagctccagggcggtggcggtggtgggcagcgc 315
            | |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1096 gagtctctagttactgcccttgctgatgagctccagggcggtggcggtggtgggcagcgc 1037

                                                                        
Query: 316  cgggatggctcccttcttggtggtgcagatggcaccgcaagcgttcgagaactgcagcac 375
            ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 1036 cgggatggctcccttcttggtggtgcagatggcgccgcaagcgttcgagaactgcagcac 977

                                                                        
Query: 376  ctccctcagcttggcctcattgtagaagatggagtcgtccttggagacattgatgaggag 435
            ||||||||||||||||||||||||||||||||||||||||||||||||  ||| ||||||
Sbjct: 976  ctccctcagcttggcctcattgtagaagatggagtcgtccttggagacgctgacgaggag 917

                                                
Query: 436  ggagccgacgaaggcgtcgccggcgccggtggtgtc 471
            ||||||||||||||||||||||||||||||||||||
Sbjct: 916  ggagccgacgaaggcgtcgccggcgccggtggtgtc 881



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>ref|XM_479756.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1314

 Score =  244 bits (123), Expect = 2e-61
 Identities = 180/199 (90%)
 Strand = Plus / Minus

                                                                        
Query: 273  ccttgctgatgagctccagggcggtggcggtggtgggcagcgccgggatggctcccttct 332
            ||||||||||||||||| | |||  ||||  ||||||||||||||||||||| |||||||
Sbjct: 1088 ccttgctgatgagctcctgcgcgacggcgacggtgggcagcgccgggatggcacccttct 1029

                                                                        
Query: 333  tggtggtgcagatggcaccgcaagcgttcgagaactgcagcacctccctcagcttggcct 392
            |||||||||||||||| ||||| |||||||||||||  ||| |||||||||||||  |||
Sbjct: 1028 tggtggtgcagatggctccgcacgcgttcgagaacttgagcgcctccctcagcttctcct 969

                                                                        
Query: 393  cattgtagaagatggagtcgtccttggagacattgatgaggagggagccgacgaaggcgt 452
            | |||| |||||||||||||||||||| ||| |||| |||||||||||||||||||||||
Sbjct: 968  cgttgtggaagatggagtcgtccttggcgacgttgacgaggagggagccgacgaaggcgt 909

                               
Query: 453  cgccggcgccggtggtgtc 471
            |||||||||||||||||||
Sbjct: 908  cgccggcgccggtggtgtc 890



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>ref|XM_507097.1| PREDICTED Oryza sativa (japonica cultivar-group), P0498H04.29 mRNA
          Length = 1422

 Score =  244 bits (123), Expect = 2e-61
 Identities = 180/199 (90%)
 Strand = Plus / Minus

                                                                        
Query: 273  ccttgctgatgagctccagggcggtggcggtggtgggcagcgccgggatggctcccttct 332
            ||||||||||||||||| | |||  ||||  ||||||||||||||||||||| |||||||
Sbjct: 1088 ccttgctgatgagctcctgcgcgacggcgacggtgggcagcgccgggatggcacccttct 1029

                                                                        
Query: 333  tggtggtgcagatggcaccgcaagcgttcgagaactgcagcacctccctcagcttggcct 392
            |||||||||||||||| ||||| |||||||||||||  ||| |||||||||||||  |||
Sbjct: 1028 tggtggtgcagatggctccgcacgcgttcgagaacttgagcgcctccctcagcttctcct 969

                                                                        
Query: 393  cattgtagaagatggagtcgtccttggagacattgatgaggagggagccgacgaaggcgt 452
            | |||| |||||||||||||||||||| ||| |||| |||||||||||||||||||||||
Sbjct: 968  cgttgtggaagatggagtcgtccttggcgacgttgacgaggagggagccgacgaaggcgt 909

                               
Query: 453  cgccggcgccggtggtgtc 471
            |||||||||||||||||||
Sbjct: 908  cgccggcgccggtggtgtc 890



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>dbj|AB110164.1| Oryza sativa (japonica cultivar-group) mRNA for fructokinase,
            complete cds, clone: 12FPB009
          Length = 1239

 Score =  244 bits (123), Expect = 2e-61
 Identities = 180/199 (90%)
 Strand = Plus / Minus

                                                                        
Query: 273  ccttgctgatgagctccagggcggtggcggtggtgggcagcgccgggatggctcccttct 332
            ||||||||||||||||| | |||  ||||  ||||||||||||||||||||| |||||||
Sbjct: 1011 ccttgctgatgagctcctgcgcgacggcgacggtgggcagcgccgggatggcacccttct 952

                                                                        
Query: 333  tggtggtgcagatggcaccgcaagcgttcgagaactgcagcacctccctcagcttggcct 392
            |||||||||||||||| ||||| |||||||||||||  ||| |||||||||||||  |||
Sbjct: 951  tggtggtgcagatggctccgcacgcgttcgagaacttgagcgcctccctcagcttctcct 892

                                                                        
Query: 393  cattgtagaagatggagtcgtccttggagacattgatgaggagggagccgacgaaggcgt 452
            | |||| |||||||||||||||||||| ||| |||| |||||||||||||||||||||||
Sbjct: 891  cgttgtggaagatggagtcgtccttggcgacgttgacgaggagggagccgacgaaggcgt 832

                               
Query: 453  cgccggcgccggtggtgtc 471
            |||||||||||||||||||
Sbjct: 831  cgccggcgccggtggtgtc 813



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>gb|AF429947.1| Oryza sativa putative fructokinase II mRNA, complete cds
          Length = 1164

 Score =  244 bits (123), Expect = 2e-61
 Identities = 180/199 (90%)
 Strand = Plus / Minus

                                                                        
Query: 273  ccttgctgatgagctccagggcggtggcggtggtgggcagcgccgggatggctcccttct 332
            ||||||||||||||||| | |||  ||||  ||||||||||||||||||||| |||||||
Sbjct: 1046 ccttgctgatgagctcctgcgcgacggcgacggtgggcagcgccgggatggcacccttct 987

                                                                        
Query: 333  tggtggtgcagatggcaccgcaagcgttcgagaactgcagcacctccctcagcttggcct 392
            |||||||||||||||| ||||| |||||||||||||  ||| |||||||||||||  |||
Sbjct: 986  tggtggtgcagatggctccgcacgcgttcgagaacttgagcgcctccctcagcttctcct 927

                                                                        
Query: 393  cattgtagaagatggagtcgtccttggagacattgatgaggagggagccgacgaaggcgt 452
            | |||| |||||||||||||||||||| ||| |||| |||||||||||||||||||||||
Sbjct: 926  cgttgtggaagatggagtcgtccttggcgacgttgacgaggagggagccgacgaaggcgt 867

                               
Query: 453  cgccggcgccggtggtgtc 471
            |||||||||||||||||||
Sbjct: 866  cgccggcgccggtggtgtc 848



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>dbj|AK099353.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033041J08, full
            insert sequence
          Length = 1315

 Score =  244 bits (123), Expect = 2e-61
 Identities = 180/199 (90%)
 Strand = Plus / Minus

                                                                        
Query: 273  ccttgctgatgagctccagggcggtggcggtggtgggcagcgccgggatggctcccttct 332
            ||||||||||||||||| | |||  ||||  ||||||||||||||||||||| |||||||
Sbjct: 1088 ccttgctgatgagctcctgcgcgacggcgacggtgggcagcgccgggatggcacccttct 1029

                                                                        
Query: 333  tggtggtgcagatggcaccgcaagcgttcgagaactgcagcacctccctcagcttggcct 392
            |||||||||||||||| ||||| |||||||||||||  ||| |||||||||||||  |||
Sbjct: 1028 tggtggtgcagatggctccgcacgcgttcgagaacttgagcgcctccctcagcttctcct 969

                                                                        
Query: 393  cattgtagaagatggagtcgtccttggagacattgatgaggagggagccgacgaaggcgt 452
            | |||| |||||||||||||||||||| ||| |||| |||||||||||||||||||||||
Sbjct: 968  cgttgtggaagatggagtcgtccttggcgacgttgacgaggagggagccgacgaaggcgt 909

                               
Query: 453  cgccggcgccggtggtgtc 471
            |||||||||||||||||||
Sbjct: 908  cgccggcgccggtggtgtc 890



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>dbj|AK070120.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023041C07, full
            insert sequence
          Length = 1422

 Score =  244 bits (123), Expect = 2e-61
 Identities = 180/199 (90%)
 Strand = Plus / Minus

                                                                        
Query: 273  ccttgctgatgagctccagggcggtggcggtggtgggcagcgccgggatggctcccttct 332
            ||||||||||||||||| | |||  ||||  ||||||||||||||||||||| |||||||
Sbjct: 1088 ccttgctgatgagctcctgcgcgacggcgacggtgggcagcgccgggatggcacccttct 1029

                                                                        
Query: 333  tggtggtgcagatggcaccgcaagcgttcgagaactgcagcacctccctcagcttggcct 392
            |||||||||||||||| ||||| |||||||||||||  ||| |||||||||||||  |||
Sbjct: 1028 tggtggtgcagatggctccgcacgcgttcgagaacttgagcgcctccctcagcttctcct 969

                                                                        
Query: 393  cattgtagaagatggagtcgtccttggagacattgatgaggagggagccgacgaaggcgt 452
            | |||| |||||||||||||||||||| ||| |||| |||||||||||||||||||||||
Sbjct: 968  cgttgtggaagatggagtcgtccttggcgacgttgacgaggagggagccgacgaaggcgt 909

                               
Query: 453  cgccggcgccggtggtgtc 471
            |||||||||||||||||||
Sbjct: 908  cgccggcgccggtggtgtc 890



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>dbj|AK061391.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-305-C10, full
           insert sequence
          Length = 1165

 Score =  244 bits (123), Expect = 2e-61
 Identities = 180/199 (90%)
 Strand = Plus / Minus

                                                                       
Query: 273 ccttgctgatgagctccagggcggtggcggtggtgggcagcgccgggatggctcccttct 332
           ||||||||||||||||| | |||  ||||  ||||||||||||||||||||| |||||||
Sbjct: 819 ccttgctgatgagctcctgcgcgacggcgacggtgggcagcgccgggatggcacccttct 760

                                                                       
Query: 333 tggtggtgcagatggcaccgcaagcgttcgagaactgcagcacctccctcagcttggcct 392
           |||||||||||||||| ||||| |||||||||||||  ||| |||||||||||||  |||
Sbjct: 759 tggtggtgcagatggctccgcacgcgttcgagaacttgagcgcctccctcagcttctcct 700

                                                                       
Query: 393 cattgtagaagatggagtcgtccttggagacattgatgaggagggagccgacgaaggcgt 452
           | |||| |||||||||||||||||||| ||| |||| |||||||||||||||||||||||
Sbjct: 699 cgttgtggaagatggagtcgtccttggcgacgttgacgaggagggagccgacgaaggcgt 640

                              
Query: 453 cgccggcgccggtggtgtc 471
           |||||||||||||||||||
Sbjct: 639 cgccggcgccggtggtgtc 621



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>gb|BT016469.1| Zea mays clone Contig302 mRNA sequence
          Length = 1305

 Score =  198 bits (100), Expect = 1e-47
 Identities = 169/192 (88%)
 Strand = Plus / Plus

                                                                       
Query: 280 gatgagctccagggcggtggcggtggtgggcagcgccgggatggctcccttcttggtggt 339
           |||||| ||| |||||||||||   |||||||||||||||||||| ||||||||||||||
Sbjct: 448 gatgaggtcctgggcggtggcgaccgtgggcagcgccgggatggcgcccttcttggtggt 507

                                                                       
Query: 340 gcagatggcaccgcaagcgttcgagaactgcagcacctccctcagcttggcctcattgta 399
           ||||||||| ||||| ||||| |||||||  ||  |||| |  |||||  |||| |||| 
Sbjct: 508 gcagatggcgccgcaggcgttggagaacttgagagcctcgcggagcttctcctcgttgtg 567

                                                                       
Query: 400 gaagatggagtcgtccttggagacattgatgaggagggagccgacgaaggcgtcgccggc 459
           |||||||||||||||||||| ||| |||| ||||||||||||||||||||||||||||||
Sbjct: 568 gaagatggagtcgtccttggcgacgttgacgaggagggagccgacgaaggcgtcgccggc 627

                       
Query: 460 gccggtggtgtc 471
           ||||||||||||
Sbjct: 628 gccggtggtgtc 639



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>gb|AY197773.1| Zea mays fructokinase 2 (frk2) mRNA, complete cds
          Length = 1358

 Score =  198 bits (100), Expect = 1e-47
 Identities = 169/192 (88%)
 Strand = Plus / Minus

                                                                        
Query: 280  gatgagctccagggcggtggcggtggtgggcagcgccgggatggctcccttcttggtggt 339
            |||||| ||| |||||||||||   |||||||||||||||||||| ||||||||||||||
Sbjct: 1101 gatgaggtcctgggcggtggcgaccgtgggcagcgccgggatggcgcccttcttggtggt 1042

                                                                        
Query: 340  gcagatggcaccgcaagcgttcgagaactgcagcacctccctcagcttggcctcattgta 399
            ||||||||| ||||| ||||| |||||||  ||  |||| |  |||||  |||| |||| 
Sbjct: 1041 gcagatggcgccgcaggcgttggagaacttgagagcctcgcggagcttctcctcgttgtg 982

                                                                        
Query: 400  gaagatggagtcgtccttggagacattgatgaggagggagccgacgaaggcgtcgccggc 459
            |||||||||||||||||||| ||| |||| ||||||||||||||||||||||||||||||
Sbjct: 981  gaagatggagtcgtccttggcgacgttgacgaggagggagccgacgaaggcgtcgccggc 922

                        
Query: 460  gccggtggtgtc 471
            ||||||||||||
Sbjct: 921  gccggtggtgtc 910



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>gb|AY112523.1| Zea mays CL966_1 mRNA sequence
          Length = 1528

 Score =  198 bits (100), Expect = 1e-47
 Identities = 169/192 (88%)
 Strand = Plus / Minus

                                                                        
Query: 280  gatgagctccagggcggtggcggtggtgggcagcgccgggatggctcccttcttggtggt 339
            |||||| ||| |||||||||||   |||||||||||||||||||| ||||||||||||||
Sbjct: 1103 gatgaggtcctgggcggtggcgaccgtgggcagcgccgggatggcgcccttcttggtggt 1044

                                                                        
Query: 340  gcagatggcaccgcaagcgttcgagaactgcagcacctccctcagcttggcctcattgta 399
            ||||||||| ||||| ||||| |||||||  ||  |||| |  |||||  |||| |||| 
Sbjct: 1043 gcagatggcgccgcaggcgttggagaacttgagggcctcgcggagcttctcctcgttgtg 984

                                                                        
Query: 400  gaagatggagtcgtccttggagacattgatgaggagggagccgacgaaggcgtcgccggc 459
            |||||||||||||||||||| ||| |||| ||||||||||||||||||||||||||||||
Sbjct: 983  gaagatggagtcgtccttggcgacgttgacgaggagggagccgacgaaggcgtcgccggc 924

                        
Query: 460  gccggtggtgtc 471
            ||||||||||||
Sbjct: 923  gccggtggtgtc 912



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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8,
              complete sequence
          Length = 28434780

 Score =  133 bits (67), Expect = 6e-28
 Identities = 103/115 (89%)
 Strand = Plus / Minus

                                                                          
Query: 273    ccttgctgatgagctccagggcggtggcggtggtgggcagcgccgggatggctcccttct 332
              ||||||||||||||||| | |||  ||||  ||||||||||||||||||||| |||||||
Sbjct: 697311 ccttgctgatgagctcctgcgcgacggcgacggtgggcagcgccgggatggcacccttct 697252

                                                                     
Query: 333    tggtggtgcagatggcaccgcaagcgttcgagaactgcagcacctccctcagctt 387
              |||||||||||||||| ||||| |||||||||||||  ||| |||||||||||||
Sbjct: 697251 tggtggtgcagatggctccgcacgcgttcgagaacttgagcgcctccctcagctt 697197



 Score =  119 bits (60), Expect = 9e-24
 Identities = 69/72 (95%)
 Strand = Plus / Minus

                                                                          
Query: 400    gaagatggagtcgtccttggagacattgatgaggagggagccgacgaaggcgtcgccggc 459
              |||||||||||||||||||| ||| |||| ||||||||||||||||||||||||||||||
Sbjct: 697108 gaagatggagtcgtccttggcgacgttgacgaggagggagccgacgaaggcgtcgccggc 697049

                          
Query: 460    gccggtggtgtc 471
              ||||||||||||
Sbjct: 697048 gccggtggtgtc 697037



 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                       
Query: 448      ggcgtcgccggcgccggtggtgt 470
                |||||||||||||||||||||||
Sbjct: 25762932 ggcgtcgccggcgccggtggtgt 25762910



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>dbj|AP004566.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0498H04
          Length = 151046

 Score =  133 bits (67), Expect = 6e-28
 Identities = 103/115 (89%)
 Strand = Plus / Minus

                                                                          
Query: 273    ccttgctgatgagctccagggcggtggcggtggtgggcagcgccgggatggctcccttct 332
              ||||||||||||||||| | |||  ||||  ||||||||||||||||||||| |||||||
Sbjct: 124689 ccttgctgatgagctcctgcgcgacggcgacggtgggcagcgccgggatggcacccttct 124630

                                                                     
Query: 333    tggtggtgcagatggcaccgcaagcgttcgagaactgcagcacctccctcagctt 387
              |||||||||||||||| ||||| |||||||||||||  ||| |||||||||||||
Sbjct: 124629 tggtggtgcagatggctccgcacgcgttcgagaacttgagcgcctccctcagctt 124575



 Score =  119 bits (60), Expect = 9e-24
 Identities = 69/72 (95%)
 Strand = Plus / Minus

                                                                          
Query: 400    gaagatggagtcgtccttggagacattgatgaggagggagccgacgaaggcgtcgccggc 459
              |||||||||||||||||||| ||| |||| ||||||||||||||||||||||||||||||
Sbjct: 124486 gaagatggagtcgtccttggcgacgttgacgaggagggagccgacgaaggcgtcgccggc 124427

                          
Query: 460    gccggtggtgtc 471
              ||||||||||||
Sbjct: 124426 gccggtggtgtc 124415



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>gb|AF457962.1| Zea mays clone csi1n.pk0029.c8, mRNA sequence
          Length = 543

 Score =  123 bits (62), Expect = 5e-25
 Identities = 77/82 (93%)
 Strand = Plus / Minus

                                                                       
Query: 390 cctcattgtagaagatggagtcgtccttggagacattgatgaggagggagccgacgaagg 449
           |||| |||| |||||||||||||||||||| ||| |||| ||||||||||||||||||||
Sbjct: 478 cctcgttgtggaagatggagtcgtccttggcgacgttgacgaggagggagccgacgaagg 419

                                 
Query: 450 cgtcgccggcgccggtggtgtc 471
           ||||||||||||||||||||||
Sbjct: 418 cgtcgccggcgccggtggtgtc 397



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>gb|AE011951.1| Xanthomonas axonopodis pv. citri str. 306,  section 329 of 469 of the
            complete genome
          Length = 9943

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 28/28 (100%)
 Strand = Plus / Minus

                                        
Query: 444  cgaaggcgtcgccggcgccggtggtgtc 471
            ||||||||||||||||||||||||||||
Sbjct: 4071 cgaaggcgtcgccggcgccggtggtgtc 4044



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>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence
          Length = 3716413

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                                
Query: 284     agctccagggcggtggcggtggtgggcagcgcc 316
               |||||| |||||||||||||| |||||||||||
Sbjct: 3534781 agctcctgggcggtggcggtgttgggcagcgcc 3534749



 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 305    gtgggcagcgccgggatggc 324
              ||||||||||||||||||||
Sbjct: 409411 gtgggcagcgccgggatggc 409430



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>gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome
          Length = 7215267

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                        
Query: 444     cgaaggcgtcgccggcgccggtggt 468
               |||||||||||||||||||||||||
Sbjct: 6928381 cgaaggcgtcgccggcgccggtggt 6928357



 Score = 40.1 bits (20), Expect = 6.4
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                               
Query: 440     ccgacgaaggcgtcgccggcgccggtggtgtc 471
               ||||| |||| ||||||||||||||| |||||
Sbjct: 2376289 ccgacaaaggtgtcgccggcgccggtagtgtc 2376258



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>ref|XM_483354.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1740

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 448  ggcgtcgccggcgccggtggtgt 470
            |||||||||||||||||||||||
Sbjct: 1376 ggcgtcgccggcgccggtggtgt 1398



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>gb|AE011713.1| Xanthomonas axonopodis pv. citri str. 306,  section 91 of 469 of the
            complete genome
          Length = 10385

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                       
Query: 445  gaaggcgtcgccggcgccggtggtgtc 471
            ||||||||||||||| |||||||||||
Sbjct: 9504 gaaggcgtcgccggcaccggtggtgtc 9530



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>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                         
Query: 445    gaaggcgtcgccggcgccggtggtgtc 471
              ||||| |||||||||||||||||||||
Sbjct: 977444 gaaggagtcgccggcgccggtggtgtc 977418



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>dbj|AP004622.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0689E12
          Length = 147516

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 448   ggcgtcgccggcgccggtggtgt 470
             |||||||||||||||||||||||
Sbjct: 35143 ggcgtcgccggcgccggtggtgt 35121



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>dbj|AP004708.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0700D12
          Length = 145177

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 448    ggcgtcgccggcgccggtggtgt 470
              |||||||||||||||||||||||
Sbjct: 140680 ggcgtcgccggcgccggtggtgt 140658



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>dbj|AK063287.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-113-D10, full
            insert sequence
          Length = 1740

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 448  ggcgtcgccggcgccggtggtgt 470
            |||||||||||||||||||||||
Sbjct: 1376 ggcgtcgccggcgccggtggtgt 1398



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>ref|XM_633632.1| Dictyostelium discoideum hypothetical protein (DDB0185817),
          partial mRNA
          Length = 1281

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 8  acagaacaagattttgataaat 29
          ||||||||||||||||||||||
Sbjct: 25 acagaacaagattttgataaat 46



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>ref|XM_706960.1| Candida albicans SC5314 hypothetical protein (CaO19.10173), mRNA
          Length = 2358

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 18  attttgataaattttgataaacttgt 43
           ||||||||||||||||||||| ||||
Sbjct: 910 attttgataaattttgataaatttgt 885



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>ref|XM_706939.1| Candida albicans SC5314 hypothetical protein (CaO19.2650), mRNA
          Length = 2298

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 18  attttgataaattttgataaacttgt 43
           ||||||||||||||||||||| ||||
Sbjct: 850 attttgataaattttgataaatttgt 825



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>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 446     aaggcgtcgccggcgccggtggtgtc 471
               |||||||||||||| |||||||||||
Sbjct: 3510067 aaggcgtcgccggctccggtggtgtc 3510042



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>gb|DQ230532.1| Streptomyces sp. Tu6071 phenalinolactone biosynthetic gene cluster,
             complete sequence
          Length = 49461

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 287   tccagggcggtggcggtggtgg 308
             ||||||||||||||||||||||
Sbjct: 26035 tccagggcggtggcggtggtgg 26014



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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 450     cgtcgccggcgccggtggtgtc 471
               ||||||||||||||||||||||
Sbjct: 1509054 cgtcgccggcgccggtggtgtc 1509033



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>emb|AL132709.5|CNS01DTB Human chromosome 14 DNA sequence BAC R-909M7 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 200540

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 304   ggtgggcagcgccgggatggct 325
             ||||||||||||||||||||||
Sbjct: 43941 ggtgggcagcgccgggatggct 43920



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>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome
          Length = 2584158

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 308     ggcagcgccgggatggctccc 328
               |||||||||||||||||||||
Sbjct: 1879208 ggcagcgccgggatggctccc 1879228



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>ref|XM_868360.1| PREDICTED: Bos taurus similar to 5-hydroxytryptamine 1E receptor
           (5-HT-1E) (Serotonin receptor 1E) (5-HT1E) (S31)
           (LOC616356), mRNA
          Length = 1098

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 328 cttcttggtggtgcagatggc 348
           |||||||||||||||||||||
Sbjct: 156 cttcttggtggtgcagatggc 136



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>gb|AC024823.2| Caenorhabditis elegans cosmid Y55B1BM, complete sequence
          Length = 19609

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 18    attttgataaattttgataaa 38
             |||||||||||||||||||||
Sbjct: 12322 attttgataaattttgataaa 12302



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>gb|AY344643.1| Cavia porcellus serotonin receptor (5HT1E) mRNA, complete cds
          Length = 1098

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 328 cttcttggtggtgcagatggc 348
           |||||||||||||||||||||
Sbjct: 156 cttcttggtggtgcagatggc 136



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>gb|AY197772.1| Zea mays fructokinase 1 (frk1) mRNA, complete cds
          Length = 1262

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                
Query: 304 ggtgggcagcgccgggatggctcccttcttggtggtg 340
           ||||||||||| |||||| || |||||||| ||||||
Sbjct: 954 ggtgggcagcgacgggatcgcccccttcttcgtggtg 918



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>gb|AC115355.3| Mus musculus BAC clone RP23-14J16 from 9, complete sequence
          Length = 179362

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 101   cacaaagacagtaaccaaaat 121
             |||||||||||||||||||||
Sbjct: 96078 cacaaagacagtaaccaaaat 96058



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>emb|BX572594.1| Rhodopseudomonas palustris CGA009 complete genome; segment 2/16
          Length = 348971

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 451    gtcgccggcgccggtggtgtc 471
              |||||||||||||||||||||
Sbjct: 154672 gtcgccggcgccggtggtgtc 154652



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>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 451    gtcgccggcgccggtggtgtc 471
              |||||||||||||||||||||
Sbjct: 493576 gtcgccggcgccggtggtgtc 493596



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>gb|AC024651.13| Homo sapiens chromosome 15, clone RP11-753A21, complete sequence
          Length = 212185

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 419    gagacattgatgaggagggag 439
              |||||||||||||||||||||
Sbjct: 123005 gagacattgatgaggagggag 123025



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>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome
          Length = 3561584

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 451    gtcgccggcgccggtggtgtc 471
              |||||||||||||||||||||
Sbjct: 151557 gtcgccggcgccggtggtgtc 151537



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>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome
          Length = 4352825

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                                
Query: 439     gccgacgaaggcgtcgccggcgccggtggtgtc 471
               ||||| |||||||||||| || |||||||||||
Sbjct: 2658356 gccgatgaaggcgtcgcccgccccggtggtgtc 2658388



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>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 451    gtcgccggcgccggtggtgtc 471
              |||||||||||||||||||||
Sbjct: 654313 gtcgccggcgccggtggtgtc 654333



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>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome
          Length = 3052398

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 451     gtcgccggcgccggtggtgtc 471
               |||||||||||||||||||||
Sbjct: 2572128 gtcgccggcgccggtggtgtc 2572148



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>dbj|BA000001.2| Pyrococcus horikoshii OT3 DNA, complete genome
          Length = 1738505

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 199    aataataaaagtgcagctaaa 219
              |||||||||||||||||||||
Sbjct: 763422 aataataaaagtgcagctaaa 763442



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>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                                
Query: 439     gccgacgaaggcgtcgccggcgccggtggtgtc 471
               ||||||||||   ||||||||||||||||||||
Sbjct: 3113740 gccgacgaagcaatcgccggcgccggtggtgtc 3113772



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>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome
          Length = 3551823

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                            
Query: 291     gggcggtggcggtggtgggcagcgccggg 319
               |||||||||||| || |||||||||||||
Sbjct: 2040546 gggcggtggcggcggggggcagcgccggg 2040518



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>gb|AC147565.4| Mus musculus BAC clone RP23-116P18 from 9, complete sequence
          Length = 206373

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 101  cacaaagacagtaaccaaaat 121
            |||||||||||||||||||||
Sbjct: 3246 cacaaagacagtaaccaaaat 3266



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>emb|AL772346.5| Mouse DNA sequence from clone RP23-413E7 on chromosome 4, complete
              sequence
          Length = 189115

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 18     attttgataaattttgataaa 38
              |||||||||||||||||||||
Sbjct: 139327 attttgataaattttgataaa 139307



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>ref|NM_102811.1| Arabidopsis thaliana unknown protein AT1G30750 mRNA, complete cds
          Length = 803

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 110 agtaaccaaaatcaccacac 129
           ||||||||||||||||||||
Sbjct: 108 agtaaccaaaatcaccacac 127



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>ref|NM_196736.1| Oryza sativa (japonica cultivar-group) hypothetical protein
           (OSJNBa0094K20.11), mRNA
          Length = 3093

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 291 gggcggtggcggtggtgggc 310
           ||||||||||||||||||||
Sbjct: 68  gggcggtggcggtggtgggc 87



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>ref|NM_196065.1| Oryza sativa (japonica cultivar-group) unknown protein
           (OSJNBb0089F16.6), mRNA
          Length = 868

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 433 gagggagccgacgaaggcgtcgccggcg 460
           ||||||||||||||||||| || |||||
Sbjct: 205 gagggagccgacgaaggcgccggcggcg 178



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>ref|NM_193931.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 492

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 287 tccagggcggtggcggtggtgggc 310
           ||||||||||||||||||| ||||
Sbjct: 368 tccagggcggtggcggtggagggc 391



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>ref|XM_361361.1| Magnaporthe grisea 70-15 predicted protein (MG03835.4) partial mRNA
          Length = 570

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 290 agggcggtggcggtggtggg 309
           ||||||||||||||||||||
Sbjct: 154 agggcggtggcggtggtggg 135



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>gb|BC003324.1| Mus musculus cDNA sequence BC003324, mRNA (cDNA clone MGC:7036
           IMAGE:3156139), complete cds
          Length = 1278

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 367 ctgcagcacctccctcagct 386
           ||||||||||||||||||||
Sbjct: 546 ctgcagcacctccctcagct 527



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>ref|NM_030259.1| Mus musculus cDNA sequence BC003324 (BC003324), mRNA
          Length = 1278

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 367 ctgcagcacctccctcagct 386
           ||||||||||||||||||||
Sbjct: 546 ctgcagcacctccctcagct 527



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>gb|AC127339.3| Mus musculus BAC clone RP23-180G16 from chromosome 5, complete sequence
          Length = 225376

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 367    ctgcagcacctccctcagct 386
              ||||||||||||||||||||
Sbjct: 212222 ctgcagcacctccctcagct 212241



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>gb|BT012972.1| Lycopersicon esculentum clone 114182R, mRNA sequence
          Length = 2213

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 49   cataagactgataaattctg 68
            ||||||||||||||||||||
Sbjct: 1979 cataagactgataaattctg 1960



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>emb|AJ251914.1|SSC251914 Sus scrofa MHC class I SLA genes, haplotype H01, clone BAC 493A6
          Length = 158063

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 108   acagtaaccaaaatcaccacacat 131
             |||||||||||||| |||||||||
Sbjct: 46198 acagtaaccaaaattaccacacat 46175



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>gb|AC127313.3| Mus musculus BAC clone RP23-311A21 from 5, complete sequence
          Length = 195651

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 367   ctgcagcacctccctcagct 386
             ||||||||||||||||||||
Sbjct: 45944 ctgcagcacctccctcagct 45963



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>emb|X61004.1|KPSCRK K.pneumoniae scrK gene for fructokinase
          Length = 1237

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 441  cgacgaaggcgtcgccggcgccggtggt 468
            |||| ||||| |||||||||||||||||
Sbjct: 1038 cgacaaaggcatcgccggcgccggtggt 1011



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>emb|AL356632.12| Human DNA sequence from clone RP11-7D5 on chromosome 10 Contains a
             ribosomal protein S3A (RPS3A) pseudogene, the PYCS gene
             for pyrroline-5-carboxylate synthetase (glutamate
             gamma-semialdehyde synthetase) (GSAS, P5CS), the gene for
             a novel protein (DKFZP564D116, FLJ40976), the 5' end of
             the ENTPD1 gene for ectonucleoside triphosphate
             diphosphohydrolase 1 and two CpG islands, complete
             sequence
          Length = 163166

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 27/28 (96%), Gaps = 1/28 (3%)
 Strand = Plus / Minus

                                         
Query: 295   ggtggcggtggtgggcagcgccgggatg 322
             |||||||||||||| |||||||||||||
Sbjct: 89870 ggtggcggtggtgg-cagcgccgggatg 89844



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>emb|AL355133.8| Human DNA sequence from clone RP11-54N6 on chromosome 20 Contains STSs
             and GSSs, complete sequence
          Length = 42303

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 19    ttttgataaattttgataaacttg 42
             ||||||||||||| ||||||||||
Sbjct: 38311 ttttgataaatttagataaacttg 38288



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>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence
          Length = 2726152

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 274     cttgctgatgagctccaggg 293
               ||||||||||||||||||||
Sbjct: 1611806 cttgctgatgagctccaggg 1611825



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>emb|AL138889.9| Human DNA sequence from clone RP3-468B3 on chromosome 6 Contains the 5'
             end of the MLN gene for motilin, part of a novel gene and
             a CpG island, complete sequence
          Length = 136886

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 204   taaaagtgcagctaaactcc 223
             ||||||||||||||||||||
Sbjct: 17442 taaaagtgcagctaaactcc 17423



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>emb|AL121915.8|HSJ1193N1 Human DNA sequence from clone RP5-1193N1 on chromosome 20 Contains the
             LAMR1P1 gene for laminin receptor 1 pseudogene 1, complete
             sequence
          Length = 51859

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 7     aacagaacaagattttgataaatt 30
             ||||||||||| ||||||||||||
Sbjct: 51374 aacagaacaagcttttgataaatt 51397



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>emb|Z34846.1|SSBAT1G S.scrofa BAT1 gene
          Length = 10674

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 108  acagtaaccaaaatcaccacacat 131
            |||||||||||||| |||||||||
Sbjct: 8819 acagtaaccaaaattaccacacat 8796



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>gb|AY113970.1| Arabidopsis thaliana unknown protein (At1g30750) mRNA, complete cds
          Length = 670

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 110 agtaaccaaaatcaccacac 129
           ||||||||||||||||||||
Sbjct: 87  agtaaccaaaatcaccacac 106



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>gb|AY050922.1| Arabidopsis thaliana unknown protein (At1g30750) mRNA, complete cds
          Length = 822

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 110 agtaaccaaaatcaccacac 129
           ||||||||||||||||||||
Sbjct: 110 agtaaccaaaatcaccacac 129



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>emb|AL939118.1|SCO939118 Streptomyces coelicolor A3(2) complete genome; segment 15/29
          Length = 303550

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 452    tcgccggcgccggtggtgtc 471
              ||||||||||||||||||||
Sbjct: 280807 tcgccggcgccggtggtgtc 280788



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>emb|AL606615.4|OSJN00048 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0086B14,
             complete sequence
          Length = 175698

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 14    caagattttgataaattttgataa 37
             ||||||||||||| ||||||||||
Sbjct: 16049 caagattttgatagattttgataa 16072



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>emb|CR855302.6| Zebrafish DNA sequence from clone CH211-120A5 in linkage group 3,
              complete sequence
          Length = 182196

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 179    ctaaaactcaactcatacctaata 202
              |||||||||||||||||| |||||
Sbjct: 159990 ctaaaactcaactcatacataata 160013



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>gb|AC138665.11| Mus musculus chromosome 3, clone RP24-161I8, complete sequence
          Length = 168293

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 19    ttttgataaattttgataaa 38
             ||||||||||||||||||||
Sbjct: 13753 ttttgataaattttgataaa 13772



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>gb|AC113416.2| Homo sapiens chromosome 5 clone RP11-560F8, complete sequence
          Length = 190848

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 130   atgcttgctttttattaagc 149
             ||||||||||||||||||||
Sbjct: 12985 atgcttgctttttattaagc 12966



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>gb|AC113380.2| Homo sapiens chromosome 5 clone RP11-304B20, complete sequence
          Length = 143534

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 130   atgcttgctttttattaagc 149
             ||||||||||||||||||||
Sbjct: 29580 atgcttgctttttattaagc 29599



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>gb|AC093181.5| Oryza sativa chromosome 10 BAC OSJNBb0089F16 genomic sequence, complete
             sequence
          Length = 154696

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 433   gagggagccgacgaaggcgtcgccggcg 460
             ||||||||||||||||||| || |||||
Sbjct: 26105 gagggagccgacgaaggcgccggcggcg 26078



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>gb|AF351608.1| Sus scrofa CRY (CRY) mRNA, complete cds
          Length = 1513

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 295 ggtggcggtggtgggcagcg 314
           ||||||||||||||||||||
Sbjct: 68  ggtggcggtggtgggcagcg 87



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>dbj|AK133760.1| Mus musculus 8 days embryo whole body cDNA, RIKEN full-length
           enriched library, clone:5730407M15 product:similar to
           Hypothetical protein FLJ32372 (P40phox binding protein)
           [Homo sapiens], full insert sequence
          Length = 1335

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 367 ctgcagcacctccctcagct 386
           ||||||||||||||||||||
Sbjct: 678 ctgcagcacctccctcagct 659



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>dbj|AK150252.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length
           enriched library, clone:G530149F13 product:similar to
           Hypothetical protein FLJ32372 (P40phox binding protein)
           [Homo sapiens], full insert sequence
          Length = 1122

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 367 ctgcagcacctccctcagct 386
           ||||||||||||||||||||
Sbjct: 649 ctgcagcacctccctcagct 630



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>dbj|AK150123.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length
           enriched library, clone:G530133F06 product:similar to
           Hypothetical protein FLJ32372 (P40phox binding protein)
           [Homo sapiens], full insert sequence
          Length = 1123

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 367 ctgcagcacctccctcagct 386
           ||||||||||||||||||||
Sbjct: 650 ctgcagcacctccctcagct 631



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>gb|DP000042.1| Lemur catta target 106 genomic scaffold
          Length = 452647

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 2      aagctaacagaacaagattt 21
              ||||||||||||||||||||
Sbjct: 325773 aagctaacagaacaagattt 325792



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>gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete
              genome
          Length = 3570858

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 294    cggtggcggtggtgggcagc 313
              ||||||||||||||||||||
Sbjct: 165052 cggtggcggtggtgggcagc 165033



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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 14       caagattttgataaattttgataa 37
                ||||||||||||| ||||||||||
Sbjct: 22412294 caagattttgatagattttgataa 22412317



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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 291      gggcggtggcggtggtgggc 310
                ||||||||||||||||||||
Sbjct: 15607308 gggcggtggcggtggtgggc 15607327



 Score = 40.1 bits (20), Expect = 6.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                            
Query: 433      gagggagccgacgaaggcgtcgccggcg 460
                ||||||||||||||||||| || |||||
Sbjct: 10867995 gagggagccgacgaaggcgccggcggcg 10867968



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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 287      tccagggcggtggcggtggtgggc 310
                ||||||||||||||||||| ||||
Sbjct: 15974811 tccagggcggtggcggtggagggc 15974788



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>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome
          Length = 3304561

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 452     tcgccggcgccggtggtgtc 471
               ||||||||||||||||||||
Sbjct: 1014247 tcgccggcgccggtggtgtc 1014266



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>gb|AC025907.2|AC025907 Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0094K20,
             complete sequence
          Length = 193119

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 291   gggcggtggcggtggtgggc 310
             ||||||||||||||||||||
Sbjct: 94674 gggcggtggcggtggtgggc 94693



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>gb|AY787762.1| Streptomyces filamentosus strain NRRL 11379 daptomycin biosynthetic
             gene cluster, partial sequence
          Length = 127559

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 289   cagggcggtggcggtggtgg 308
             ||||||||||||||||||||
Sbjct: 70283 cagggcggtggcggtggtgg 70264



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>gb|AC007060.3|T5I8 Arabidopsis thaliana chromosome 1 BAC T5I8 sequence, complete sequence
          Length = 96183

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 110   agtaaccaaaatcaccacac 129
             ||||||||||||||||||||
Sbjct: 80853 agtaaccaaaatcaccacac 80834



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>ref|NM_213881.1| Sus scrofa CRY protein (CRY), mRNA
          Length = 1513

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 295 ggtggcggtggtgggcagcg 314
           ||||||||||||||||||||
Sbjct: 68  ggtggcggtggtgggcagcg 87



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>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome
          Length = 4659019

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 291     gggcggtggcggtggtgggcagcg 314
               |||||| |||||||||||||||||
Sbjct: 1986506 gggcggaggcggtggtgggcagcg 1986529



 Score = 40.1 bits (20), Expect = 6.4
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                              
Query: 439    gccgacgaaggcgtcgccggcgccggtggtgt 470
              |||| |||||| |||||||| |||||||||||
Sbjct: 260643 gccgtcgaaggtgtcgccggtgccggtggtgt 260674



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>dbj|AP003853.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OSJNBa0091E23
          Length = 155939

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 287   tccagggcggtggcggtggtgggc 310
             ||||||||||||||||||| ||||
Sbjct: 66396 tccagggcggtggcggtggagggc 66373



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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 292     ggcggtggcggtggtgggcagcgc 315
               |||||||||||||| |||||||||
Sbjct: 5988162 ggcggtggcggtggcgggcagcgc 5988185



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>dbj|AK121939.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033107D06, full
           insert sequence
          Length = 3100

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 291 gggcggtggcggtggtgggc 310
           ||||||||||||||||||||
Sbjct: 204 gggcggtggcggtggtgggc 223



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>dbj|AK109451.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-117-E01, full
           insert sequence
          Length = 2482

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 433 gagggagccgacgaaggcgtcgccggcg 460
           ||||||||||||||||||| || |||||
Sbjct: 226 gagggagccgacgaaggcgccggcggcg 199



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>gb|DQ322651.1| Streptomyces sp. FR1 plasmid pFRL1, complete sequence
          Length = 54288

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 281   atgagctccagggcggtggcggtg 304
             |||||||||||||||||| |||||
Sbjct: 26497 atgagctccagggcggtgtcggtg 26474



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>gb|AF080235.1|AF080235 Streptomyces cyanogenus landomycin biosynthetic gene cluster, complete
             sequence
          Length = 34644

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 438   agccgacgaaggcgtcgccg 457
             ||||||||||||||||||||
Sbjct: 18941 agccgacgaaggcgtcgccg 18922



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>gb|AC138585.14| Mus musculus chromosome 3, clone RP23-174P13, complete sequence
          Length = 209896

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 19    ttttgataaattttgataaa 38
             ||||||||||||||||||||
Sbjct: 37863 ttttgataaattttgataaa 37844



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>gb|AC115945.9| Mus musculus chromosome 3, clone RP24-555P13, complete sequence
          Length = 172240

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 387    tggcctcattgtagaagatg 406
              ||||||||||||||||||||
Sbjct: 143951 tggcctcattgtagaagatg 143970



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>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 294     cggtggcggtggtgggcagc 313
               ||||||||||||||||||||
Sbjct: 4065930 cggtggcggtggtgggcagc 4065911



to top

>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 291      gggcggtggcggtggtgggc 310
                ||||||||||||||||||||
Sbjct: 15615549 gggcggtggcggtggtgggc 15615568



 Score = 40.1 bits (20), Expect = 6.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                            
Query: 433      gagggagccgacgaaggcgtcgccggcg 460
                ||||||||||||||||||| || |||||
Sbjct: 10874035 gagggagccgacgaaggcgccggcggcg 10874008



to top

>emb|AM114786.1| Platynereis dumerilii mRNA for Pit1 protein
          Length = 1474

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 376 ctccctcagcttggcctcat 395
           ||||||||||||||||||||
Sbjct: 745 ctccctcagcttggcctcat 726



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>emb|AL591782.1|SME591782 Sinorhizobium meliloti 1021 complete chromosome; segment 1/12
          Length = 260050

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 452    tcgccggcgccggtggtgtc 471
              ||||||||||||||||||||
Sbjct: 195836 tcgccggcgccggtggtgtc 195817



to top

>gb|AF494278.1| Chaetosphaeridium globosum chloroplast, complete genome
          Length = 131183

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 191    tcatacctaataataaaagt 210
              ||||||||||||||||||||
Sbjct: 115986 tcatacctaataataaaagt 115967



to top

>emb|AL845548.7| Mouse DNA sequence from clone RP23-307N14 on chromosome 2, complete
              sequence
          Length = 142263

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 192    catacctaataataaaagtg 211
              ||||||||||||||||||||
Sbjct: 103740 catacctaataataaaagtg 103721



to top

>emb|AL731838.19| Mouse DNA sequence from clone RP23-139O16 on chromosome X, complete
              sequence
          Length = 212472

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 117    aaaatcaccacacatgcttgctttttat 144
              ||||| || |||||||||||||||||||
Sbjct: 112125 aaaataacaacacatgcttgctttttat 112152


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,129,073
Number of Sequences: 3902068
Number of extensions: 5129073
Number of successful extensions: 130459
Number of sequences better than 10.0: 105
Number of HSP's better than 10.0 without gapping: 108
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 127977
Number of HSP's gapped (non-prelim): 2474
length of query: 471
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 449
effective length of database: 17,147,199,772
effective search space: 7699092697628
effective search space used: 7699092697628
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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