Clone Name | rbart48f08 |
---|---|
Clone Library Name | barley_pub |
>gb|BT008921.1| Triticum aestivum clone wyr1c.pk002.o12:fis, full insert mRNA sequence Length = 1348 Score = 589 bits (297), Expect = e-165 Identities = 420/456 (92%), Gaps = 15/456 (3%) Strand = Plus / Minus Query: 29 ttttgataaacttgtccattcat--aagact--gataaattctgggtgaaggctacaaca 84 ||||||| ||||||||||||||| |||||| |||||| | |||||||||||||||||| Sbjct: 1334 ttttgatgaacttgtccattcattaaagactctgataaagtttgggtgaaggctacaaca 1275 Query: 85 accattagcctccttacacaaagacagtaaccaaaatcaccacacatgcttgctttttat 144 | || |||||||||||||||||||| | |||||||||||||||||||||||||||||||| Sbjct: 1274 atcagtagcctccttacacaaagaccgcaaccaaaatcaccacacatgcttgctttttat 1215 Query: 145 taagcgcccacgaggtcacacac---tgacacaagaactaaaactcaactcatacctaat 201 ||||||||||||||||||||||| |||| || |||||||| ||||| |||| |||||| Sbjct: 1214 taagcgcccacgaggtcacacacacttgactcacgaactaaa-ctcaattcatccctaat 1156 Query: 202 aataa------aagtgcagctaaactcccctaagattcaaccccgacggcgcgacacaag 255 ||||| ||||||||||||| | |||||||||||||||||| |||||||||||| Sbjct: 1155 aataataataaaagtgcagctaaaa-ctcctaagattcaaccccgatggcgcgacacaat 1097 Query: 256 gcgtctctagttgctgcccttgctgatgagctccagggcggtggcggtggtgggcagcgc 315 | |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1096 gagtctctagttactgcccttgctgatgagctccagggcggtggcggtggtgggcagcgc 1037 Query: 316 cgggatggctcccttcttggtggtgcagatggcaccgcaagcgttcgagaactgcagcac 375 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 1036 cgggatggctcccttcttggtggtgcagatggcgccgcaagcgttcgagaactgcagcac 977 Query: 376 ctccctcagcttggcctcattgtagaagatggagtcgtccttggagacattgatgaggag 435 |||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| Sbjct: 976 ctccctcagcttggcctcattgtagaagatggagtcgtccttggagacgctgacgaggag 917 Query: 436 ggagccgacgaaggcgtcgccggcgccggtggtgtc 471 |||||||||||||||||||||||||||||||||||| Sbjct: 916 ggagccgacgaaggcgtcgccggcgccggtggtgtc 881
>ref|XM_479756.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1314 Score = 244 bits (123), Expect = 2e-61 Identities = 180/199 (90%) Strand = Plus / Minus Query: 273 ccttgctgatgagctccagggcggtggcggtggtgggcagcgccgggatggctcccttct 332 ||||||||||||||||| | ||| |||| ||||||||||||||||||||| ||||||| Sbjct: 1088 ccttgctgatgagctcctgcgcgacggcgacggtgggcagcgccgggatggcacccttct 1029 Query: 333 tggtggtgcagatggcaccgcaagcgttcgagaactgcagcacctccctcagcttggcct 392 |||||||||||||||| ||||| ||||||||||||| ||| ||||||||||||| ||| Sbjct: 1028 tggtggtgcagatggctccgcacgcgttcgagaacttgagcgcctccctcagcttctcct 969 Query: 393 cattgtagaagatggagtcgtccttggagacattgatgaggagggagccgacgaaggcgt 452 | |||| |||||||||||||||||||| ||| |||| ||||||||||||||||||||||| Sbjct: 968 cgttgtggaagatggagtcgtccttggcgacgttgacgaggagggagccgacgaaggcgt 909 Query: 453 cgccggcgccggtggtgtc 471 ||||||||||||||||||| Sbjct: 908 cgccggcgccggtggtgtc 890
>ref|XM_507097.1| PREDICTED Oryza sativa (japonica cultivar-group), P0498H04.29 mRNA Length = 1422 Score = 244 bits (123), Expect = 2e-61 Identities = 180/199 (90%) Strand = Plus / Minus Query: 273 ccttgctgatgagctccagggcggtggcggtggtgggcagcgccgggatggctcccttct 332 ||||||||||||||||| | ||| |||| ||||||||||||||||||||| ||||||| Sbjct: 1088 ccttgctgatgagctcctgcgcgacggcgacggtgggcagcgccgggatggcacccttct 1029 Query: 333 tggtggtgcagatggcaccgcaagcgttcgagaactgcagcacctccctcagcttggcct 392 |||||||||||||||| ||||| ||||||||||||| ||| ||||||||||||| ||| Sbjct: 1028 tggtggtgcagatggctccgcacgcgttcgagaacttgagcgcctccctcagcttctcct 969 Query: 393 cattgtagaagatggagtcgtccttggagacattgatgaggagggagccgacgaaggcgt 452 | |||| |||||||||||||||||||| ||| |||| ||||||||||||||||||||||| Sbjct: 968 cgttgtggaagatggagtcgtccttggcgacgttgacgaggagggagccgacgaaggcgt 909 Query: 453 cgccggcgccggtggtgtc 471 ||||||||||||||||||| Sbjct: 908 cgccggcgccggtggtgtc 890
>dbj|AB110164.1| Oryza sativa (japonica cultivar-group) mRNA for fructokinase, complete cds, clone: 12FPB009 Length = 1239 Score = 244 bits (123), Expect = 2e-61 Identities = 180/199 (90%) Strand = Plus / Minus Query: 273 ccttgctgatgagctccagggcggtggcggtggtgggcagcgccgggatggctcccttct 332 ||||||||||||||||| | ||| |||| ||||||||||||||||||||| ||||||| Sbjct: 1011 ccttgctgatgagctcctgcgcgacggcgacggtgggcagcgccgggatggcacccttct 952 Query: 333 tggtggtgcagatggcaccgcaagcgttcgagaactgcagcacctccctcagcttggcct 392 |||||||||||||||| ||||| ||||||||||||| ||| ||||||||||||| ||| Sbjct: 951 tggtggtgcagatggctccgcacgcgttcgagaacttgagcgcctccctcagcttctcct 892 Query: 393 cattgtagaagatggagtcgtccttggagacattgatgaggagggagccgacgaaggcgt 452 | |||| |||||||||||||||||||| ||| |||| ||||||||||||||||||||||| Sbjct: 891 cgttgtggaagatggagtcgtccttggcgacgttgacgaggagggagccgacgaaggcgt 832 Query: 453 cgccggcgccggtggtgtc 471 ||||||||||||||||||| Sbjct: 831 cgccggcgccggtggtgtc 813
>gb|AF429947.1| Oryza sativa putative fructokinase II mRNA, complete cds Length = 1164 Score = 244 bits (123), Expect = 2e-61 Identities = 180/199 (90%) Strand = Plus / Minus Query: 273 ccttgctgatgagctccagggcggtggcggtggtgggcagcgccgggatggctcccttct 332 ||||||||||||||||| | ||| |||| ||||||||||||||||||||| ||||||| Sbjct: 1046 ccttgctgatgagctcctgcgcgacggcgacggtgggcagcgccgggatggcacccttct 987 Query: 333 tggtggtgcagatggcaccgcaagcgttcgagaactgcagcacctccctcagcttggcct 392 |||||||||||||||| ||||| ||||||||||||| ||| ||||||||||||| ||| Sbjct: 986 tggtggtgcagatggctccgcacgcgttcgagaacttgagcgcctccctcagcttctcct 927 Query: 393 cattgtagaagatggagtcgtccttggagacattgatgaggagggagccgacgaaggcgt 452 | |||| |||||||||||||||||||| ||| |||| ||||||||||||||||||||||| Sbjct: 926 cgttgtggaagatggagtcgtccttggcgacgttgacgaggagggagccgacgaaggcgt 867 Query: 453 cgccggcgccggtggtgtc 471 ||||||||||||||||||| Sbjct: 866 cgccggcgccggtggtgtc 848
>dbj|AK099353.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033041J08, full insert sequence Length = 1315 Score = 244 bits (123), Expect = 2e-61 Identities = 180/199 (90%) Strand = Plus / Minus Query: 273 ccttgctgatgagctccagggcggtggcggtggtgggcagcgccgggatggctcccttct 332 ||||||||||||||||| | ||| |||| ||||||||||||||||||||| ||||||| Sbjct: 1088 ccttgctgatgagctcctgcgcgacggcgacggtgggcagcgccgggatggcacccttct 1029 Query: 333 tggtggtgcagatggcaccgcaagcgttcgagaactgcagcacctccctcagcttggcct 392 |||||||||||||||| ||||| ||||||||||||| ||| ||||||||||||| ||| Sbjct: 1028 tggtggtgcagatggctccgcacgcgttcgagaacttgagcgcctccctcagcttctcct 969 Query: 393 cattgtagaagatggagtcgtccttggagacattgatgaggagggagccgacgaaggcgt 452 | |||| |||||||||||||||||||| ||| |||| ||||||||||||||||||||||| Sbjct: 968 cgttgtggaagatggagtcgtccttggcgacgttgacgaggagggagccgacgaaggcgt 909 Query: 453 cgccggcgccggtggtgtc 471 ||||||||||||||||||| Sbjct: 908 cgccggcgccggtggtgtc 890
>dbj|AK070120.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023041C07, full insert sequence Length = 1422 Score = 244 bits (123), Expect = 2e-61 Identities = 180/199 (90%) Strand = Plus / Minus Query: 273 ccttgctgatgagctccagggcggtggcggtggtgggcagcgccgggatggctcccttct 332 ||||||||||||||||| | ||| |||| ||||||||||||||||||||| ||||||| Sbjct: 1088 ccttgctgatgagctcctgcgcgacggcgacggtgggcagcgccgggatggcacccttct 1029 Query: 333 tggtggtgcagatggcaccgcaagcgttcgagaactgcagcacctccctcagcttggcct 392 |||||||||||||||| ||||| ||||||||||||| ||| ||||||||||||| ||| Sbjct: 1028 tggtggtgcagatggctccgcacgcgttcgagaacttgagcgcctccctcagcttctcct 969 Query: 393 cattgtagaagatggagtcgtccttggagacattgatgaggagggagccgacgaaggcgt 452 | |||| |||||||||||||||||||| ||| |||| ||||||||||||||||||||||| Sbjct: 968 cgttgtggaagatggagtcgtccttggcgacgttgacgaggagggagccgacgaaggcgt 909 Query: 453 cgccggcgccggtggtgtc 471 ||||||||||||||||||| Sbjct: 908 cgccggcgccggtggtgtc 890
>dbj|AK061391.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-305-C10, full insert sequence Length = 1165 Score = 244 bits (123), Expect = 2e-61 Identities = 180/199 (90%) Strand = Plus / Minus Query: 273 ccttgctgatgagctccagggcggtggcggtggtgggcagcgccgggatggctcccttct 332 ||||||||||||||||| | ||| |||| ||||||||||||||||||||| ||||||| Sbjct: 819 ccttgctgatgagctcctgcgcgacggcgacggtgggcagcgccgggatggcacccttct 760 Query: 333 tggtggtgcagatggcaccgcaagcgttcgagaactgcagcacctccctcagcttggcct 392 |||||||||||||||| ||||| ||||||||||||| ||| ||||||||||||| ||| Sbjct: 759 tggtggtgcagatggctccgcacgcgttcgagaacttgagcgcctccctcagcttctcct 700 Query: 393 cattgtagaagatggagtcgtccttggagacattgatgaggagggagccgacgaaggcgt 452 | |||| |||||||||||||||||||| ||| |||| ||||||||||||||||||||||| Sbjct: 699 cgttgtggaagatggagtcgtccttggcgacgttgacgaggagggagccgacgaaggcgt 640 Query: 453 cgccggcgccggtggtgtc 471 ||||||||||||||||||| Sbjct: 639 cgccggcgccggtggtgtc 621
>gb|BT016469.1| Zea mays clone Contig302 mRNA sequence Length = 1305 Score = 198 bits (100), Expect = 1e-47 Identities = 169/192 (88%) Strand = Plus / Plus Query: 280 gatgagctccagggcggtggcggtggtgggcagcgccgggatggctcccttcttggtggt 339 |||||| ||| ||||||||||| |||||||||||||||||||| |||||||||||||| Sbjct: 448 gatgaggtcctgggcggtggcgaccgtgggcagcgccgggatggcgcccttcttggtggt 507 Query: 340 gcagatggcaccgcaagcgttcgagaactgcagcacctccctcagcttggcctcattgta 399 ||||||||| ||||| ||||| ||||||| || |||| | ||||| |||| |||| Sbjct: 508 gcagatggcgccgcaggcgttggagaacttgagagcctcgcggagcttctcctcgttgtg 567 Query: 400 gaagatggagtcgtccttggagacattgatgaggagggagccgacgaaggcgtcgccggc 459 |||||||||||||||||||| ||| |||| |||||||||||||||||||||||||||||| Sbjct: 568 gaagatggagtcgtccttggcgacgttgacgaggagggagccgacgaaggcgtcgccggc 627 Query: 460 gccggtggtgtc 471 |||||||||||| Sbjct: 628 gccggtggtgtc 639
>gb|AY197773.1| Zea mays fructokinase 2 (frk2) mRNA, complete cds Length = 1358 Score = 198 bits (100), Expect = 1e-47 Identities = 169/192 (88%) Strand = Plus / Minus Query: 280 gatgagctccagggcggtggcggtggtgggcagcgccgggatggctcccttcttggtggt 339 |||||| ||| ||||||||||| |||||||||||||||||||| |||||||||||||| Sbjct: 1101 gatgaggtcctgggcggtggcgaccgtgggcagcgccgggatggcgcccttcttggtggt 1042 Query: 340 gcagatggcaccgcaagcgttcgagaactgcagcacctccctcagcttggcctcattgta 399 ||||||||| ||||| ||||| ||||||| || |||| | ||||| |||| |||| Sbjct: 1041 gcagatggcgccgcaggcgttggagaacttgagagcctcgcggagcttctcctcgttgtg 982 Query: 400 gaagatggagtcgtccttggagacattgatgaggagggagccgacgaaggcgtcgccggc 459 |||||||||||||||||||| ||| |||| |||||||||||||||||||||||||||||| Sbjct: 981 gaagatggagtcgtccttggcgacgttgacgaggagggagccgacgaaggcgtcgccggc 922 Query: 460 gccggtggtgtc 471 |||||||||||| Sbjct: 921 gccggtggtgtc 910
>gb|AY112523.1| Zea mays CL966_1 mRNA sequence Length = 1528 Score = 198 bits (100), Expect = 1e-47 Identities = 169/192 (88%) Strand = Plus / Minus Query: 280 gatgagctccagggcggtggcggtggtgggcagcgccgggatggctcccttcttggtggt 339 |||||| ||| ||||||||||| |||||||||||||||||||| |||||||||||||| Sbjct: 1103 gatgaggtcctgggcggtggcgaccgtgggcagcgccgggatggcgcccttcttggtggt 1044 Query: 340 gcagatggcaccgcaagcgttcgagaactgcagcacctccctcagcttggcctcattgta 399 ||||||||| ||||| ||||| ||||||| || |||| | ||||| |||| |||| Sbjct: 1043 gcagatggcgccgcaggcgttggagaacttgagggcctcgcggagcttctcctcgttgtg 984 Query: 400 gaagatggagtcgtccttggagacattgatgaggagggagccgacgaaggcgtcgccggc 459 |||||||||||||||||||| ||| |||| |||||||||||||||||||||||||||||| Sbjct: 983 gaagatggagtcgtccttggcgacgttgacgaggagggagccgacgaaggcgtcgccggc 924 Query: 460 gccggtggtgtc 471 |||||||||||| Sbjct: 923 gccggtggtgtc 912
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 133 bits (67), Expect = 6e-28 Identities = 103/115 (89%) Strand = Plus / Minus Query: 273 ccttgctgatgagctccagggcggtggcggtggtgggcagcgccgggatggctcccttct 332 ||||||||||||||||| | ||| |||| ||||||||||||||||||||| ||||||| Sbjct: 697311 ccttgctgatgagctcctgcgcgacggcgacggtgggcagcgccgggatggcacccttct 697252 Query: 333 tggtggtgcagatggcaccgcaagcgttcgagaactgcagcacctccctcagctt 387 |||||||||||||||| ||||| ||||||||||||| ||| ||||||||||||| Sbjct: 697251 tggtggtgcagatggctccgcacgcgttcgagaacttgagcgcctccctcagctt 697197 Score = 119 bits (60), Expect = 9e-24 Identities = 69/72 (95%) Strand = Plus / Minus Query: 400 gaagatggagtcgtccttggagacattgatgaggagggagccgacgaaggcgtcgccggc 459 |||||||||||||||||||| ||| |||| |||||||||||||||||||||||||||||| Sbjct: 697108 gaagatggagtcgtccttggcgacgttgacgaggagggagccgacgaaggcgtcgccggc 697049 Query: 460 gccggtggtgtc 471 |||||||||||| Sbjct: 697048 gccggtggtgtc 697037 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 448 ggcgtcgccggcgccggtggtgt 470 ||||||||||||||||||||||| Sbjct: 25762932 ggcgtcgccggcgccggtggtgt 25762910
>dbj|AP004566.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0498H04 Length = 151046 Score = 133 bits (67), Expect = 6e-28 Identities = 103/115 (89%) Strand = Plus / Minus Query: 273 ccttgctgatgagctccagggcggtggcggtggtgggcagcgccgggatggctcccttct 332 ||||||||||||||||| | ||| |||| ||||||||||||||||||||| ||||||| Sbjct: 124689 ccttgctgatgagctcctgcgcgacggcgacggtgggcagcgccgggatggcacccttct 124630 Query: 333 tggtggtgcagatggcaccgcaagcgttcgagaactgcagcacctccctcagctt 387 |||||||||||||||| ||||| ||||||||||||| ||| ||||||||||||| Sbjct: 124629 tggtggtgcagatggctccgcacgcgttcgagaacttgagcgcctccctcagctt 124575 Score = 119 bits (60), Expect = 9e-24 Identities = 69/72 (95%) Strand = Plus / Minus Query: 400 gaagatggagtcgtccttggagacattgatgaggagggagccgacgaaggcgtcgccggc 459 |||||||||||||||||||| ||| |||| |||||||||||||||||||||||||||||| Sbjct: 124486 gaagatggagtcgtccttggcgacgttgacgaggagggagccgacgaaggcgtcgccggc 124427 Query: 460 gccggtggtgtc 471 |||||||||||| Sbjct: 124426 gccggtggtgtc 124415
>gb|AF457962.1| Zea mays clone csi1n.pk0029.c8, mRNA sequence Length = 543 Score = 123 bits (62), Expect = 5e-25 Identities = 77/82 (93%) Strand = Plus / Minus Query: 390 cctcattgtagaagatggagtcgtccttggagacattgatgaggagggagccgacgaagg 449 |||| |||| |||||||||||||||||||| ||| |||| |||||||||||||||||||| Sbjct: 478 cctcgttgtggaagatggagtcgtccttggcgacgttgacgaggagggagccgacgaagg 419 Query: 450 cgtcgccggcgccggtggtgtc 471 |||||||||||||||||||||| Sbjct: 418 cgtcgccggcgccggtggtgtc 397
>gb|AE011951.1| Xanthomonas axonopodis pv. citri str. 306, section 329 of 469 of the complete genome Length = 9943 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 444 cgaaggcgtcgccggcgccggtggtgtc 471 |||||||||||||||||||||||||||| Sbjct: 4071 cgaaggcgtcgccggcgccggtggtgtc 4044
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Minus Query: 284 agctccagggcggtggcggtggtgggcagcgcc 316 |||||| |||||||||||||| ||||||||||| Sbjct: 3534781 agctcctgggcggtggcggtgttgggcagcgcc 3534749 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 305 gtgggcagcgccgggatggc 324 |||||||||||||||||||| Sbjct: 409411 gtgggcagcgccgggatggc 409430
>gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome Length = 7215267 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Minus Query: 444 cgaaggcgtcgccggcgccggtggt 468 ||||||||||||||||||||||||| Sbjct: 6928381 cgaaggcgtcgccggcgccggtggt 6928357 Score = 40.1 bits (20), Expect = 6.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 440 ccgacgaaggcgtcgccggcgccggtggtgtc 471 ||||| |||| ||||||||||||||| ||||| Sbjct: 2376289 ccgacaaaggtgtcgccggcgccggtagtgtc 2376258
>ref|XM_483354.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1740 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 448 ggcgtcgccggcgccggtggtgt 470 ||||||||||||||||||||||| Sbjct: 1376 ggcgtcgccggcgccggtggtgt 1398
>gb|AE011713.1| Xanthomonas axonopodis pv. citri str. 306, section 91 of 469 of the complete genome Length = 10385 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Plus Query: 445 gaaggcgtcgccggcgccggtggtgtc 471 ||||||||||||||| ||||||||||| Sbjct: 9504 gaaggcgtcgccggcaccggtggtgtc 9530
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Minus Query: 445 gaaggcgtcgccggcgccggtggtgtc 471 ||||| ||||||||||||||||||||| Sbjct: 977444 gaaggagtcgccggcgccggtggtgtc 977418
>dbj|AP004622.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0689E12 Length = 147516 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 448 ggcgtcgccggcgccggtggtgt 470 ||||||||||||||||||||||| Sbjct: 35143 ggcgtcgccggcgccggtggtgt 35121
>dbj|AP004708.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0700D12 Length = 145177 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 448 ggcgtcgccggcgccggtggtgt 470 ||||||||||||||||||||||| Sbjct: 140680 ggcgtcgccggcgccggtggtgt 140658
>dbj|AK063287.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-113-D10, full insert sequence Length = 1740 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 448 ggcgtcgccggcgccggtggtgt 470 ||||||||||||||||||||||| Sbjct: 1376 ggcgtcgccggcgccggtggtgt 1398
>ref|XM_633632.1| Dictyostelium discoideum hypothetical protein (DDB0185817), partial mRNA Length = 1281 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 8 acagaacaagattttgataaat 29 |||||||||||||||||||||| Sbjct: 25 acagaacaagattttgataaat 46
>ref|XM_706960.1| Candida albicans SC5314 hypothetical protein (CaO19.10173), mRNA Length = 2358 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Minus Query: 18 attttgataaattttgataaacttgt 43 ||||||||||||||||||||| |||| Sbjct: 910 attttgataaattttgataaatttgt 885
>ref|XM_706939.1| Candida albicans SC5314 hypothetical protein (CaO19.2650), mRNA Length = 2298 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Minus Query: 18 attttgataaattttgataaacttgt 43 ||||||||||||||||||||| |||| Sbjct: 850 attttgataaattttgataaatttgt 825
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Minus Query: 446 aaggcgtcgccggcgccggtggtgtc 471 |||||||||||||| ||||||||||| Sbjct: 3510067 aaggcgtcgccggctccggtggtgtc 3510042
>gb|DQ230532.1| Streptomyces sp. Tu6071 phenalinolactone biosynthetic gene cluster, complete sequence Length = 49461 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 287 tccagggcggtggcggtggtgg 308 |||||||||||||||||||||| Sbjct: 26035 tccagggcggtggcggtggtgg 26014
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 450 cgtcgccggcgccggtggtgtc 471 |||||||||||||||||||||| Sbjct: 1509054 cgtcgccggcgccggtggtgtc 1509033
>emb|AL132709.5|CNS01DTB Human chromosome 14 DNA sequence BAC R-909M7 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 200540 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 304 ggtgggcagcgccgggatggct 325 |||||||||||||||||||||| Sbjct: 43941 ggtgggcagcgccgggatggct 43920
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 308 ggcagcgccgggatggctccc 328 ||||||||||||||||||||| Sbjct: 1879208 ggcagcgccgggatggctccc 1879228
>ref|XM_868360.1| PREDICTED: Bos taurus similar to 5-hydroxytryptamine 1E receptor (5-HT-1E) (Serotonin receptor 1E) (5-HT1E) (S31) (LOC616356), mRNA Length = 1098 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 328 cttcttggtggtgcagatggc 348 ||||||||||||||||||||| Sbjct: 156 cttcttggtggtgcagatggc 136
>gb|AC024823.2| Caenorhabditis elegans cosmid Y55B1BM, complete sequence Length = 19609 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 18 attttgataaattttgataaa 38 ||||||||||||||||||||| Sbjct: 12322 attttgataaattttgataaa 12302
>gb|AY344643.1| Cavia porcellus serotonin receptor (5HT1E) mRNA, complete cds Length = 1098 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 328 cttcttggtggtgcagatggc 348 ||||||||||||||||||||| Sbjct: 156 cttcttggtggtgcagatggc 136
>gb|AY197772.1| Zea mays fructokinase 1 (frk1) mRNA, complete cds Length = 1262 Score = 42.1 bits (21), Expect = 1.6 Identities = 33/37 (89%) Strand = Plus / Minus Query: 304 ggtgggcagcgccgggatggctcccttcttggtggtg 340 ||||||||||| |||||| || |||||||| |||||| Sbjct: 954 ggtgggcagcgacgggatcgcccccttcttcgtggtg 918
>gb|AC115355.3| Mus musculus BAC clone RP23-14J16 from 9, complete sequence Length = 179362 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 101 cacaaagacagtaaccaaaat 121 ||||||||||||||||||||| Sbjct: 96078 cacaaagacagtaaccaaaat 96058
>emb|BX572594.1| Rhodopseudomonas palustris CGA009 complete genome; segment 2/16 Length = 348971 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 451 gtcgccggcgccggtggtgtc 471 ||||||||||||||||||||| Sbjct: 154672 gtcgccggcgccggtggtgtc 154652
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 451 gtcgccggcgccggtggtgtc 471 ||||||||||||||||||||| Sbjct: 493576 gtcgccggcgccggtggtgtc 493596
>gb|AC024651.13| Homo sapiens chromosome 15, clone RP11-753A21, complete sequence Length = 212185 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 419 gagacattgatgaggagggag 439 ||||||||||||||||||||| Sbjct: 123005 gagacattgatgaggagggag 123025
>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome Length = 3561584 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 451 gtcgccggcgccggtggtgtc 471 ||||||||||||||||||||| Sbjct: 151557 gtcgccggcgccggtggtgtc 151537
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 439 gccgacgaaggcgtcgccggcgccggtggtgtc 471 ||||| |||||||||||| || ||||||||||| Sbjct: 2658356 gccgatgaaggcgtcgcccgccccggtggtgtc 2658388
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 451 gtcgccggcgccggtggtgtc 471 ||||||||||||||||||||| Sbjct: 654313 gtcgccggcgccggtggtgtc 654333
>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome Length = 3052398 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 451 gtcgccggcgccggtggtgtc 471 ||||||||||||||||||||| Sbjct: 2572128 gtcgccggcgccggtggtgtc 2572148
>dbj|BA000001.2| Pyrococcus horikoshii OT3 DNA, complete genome Length = 1738505 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 199 aataataaaagtgcagctaaa 219 ||||||||||||||||||||| Sbjct: 763422 aataataaaagtgcagctaaa 763442
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 439 gccgacgaaggcgtcgccggcgccggtggtgtc 471 |||||||||| |||||||||||||||||||| Sbjct: 3113740 gccgacgaagcaatcgccggcgccggtggtgtc 3113772
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 291 gggcggtggcggtggtgggcagcgccggg 319 |||||||||||| || ||||||||||||| Sbjct: 2040546 gggcggtggcggcggggggcagcgccggg 2040518
>gb|AC147565.4| Mus musculus BAC clone RP23-116P18 from 9, complete sequence Length = 206373 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 101 cacaaagacagtaaccaaaat 121 ||||||||||||||||||||| Sbjct: 3246 cacaaagacagtaaccaaaat 3266
>emb|AL772346.5| Mouse DNA sequence from clone RP23-413E7 on chromosome 4, complete sequence Length = 189115 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 18 attttgataaattttgataaa 38 ||||||||||||||||||||| Sbjct: 139327 attttgataaattttgataaa 139307
>ref|NM_102811.1| Arabidopsis thaliana unknown protein AT1G30750 mRNA, complete cds Length = 803 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 110 agtaaccaaaatcaccacac 129 |||||||||||||||||||| Sbjct: 108 agtaaccaaaatcaccacac 127
>ref|NM_196736.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBa0094K20.11), mRNA Length = 3093 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 291 gggcggtggcggtggtgggc 310 |||||||||||||||||||| Sbjct: 68 gggcggtggcggtggtgggc 87
>ref|NM_196065.1| Oryza sativa (japonica cultivar-group) unknown protein (OSJNBb0089F16.6), mRNA Length = 868 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 433 gagggagccgacgaaggcgtcgccggcg 460 ||||||||||||||||||| || ||||| Sbjct: 205 gagggagccgacgaaggcgccggcggcg 178
>ref|NM_193931.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 492 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 287 tccagggcggtggcggtggtgggc 310 ||||||||||||||||||| |||| Sbjct: 368 tccagggcggtggcggtggagggc 391
>ref|XM_361361.1| Magnaporthe grisea 70-15 predicted protein (MG03835.4) partial mRNA Length = 570 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 290 agggcggtggcggtggtggg 309 |||||||||||||||||||| Sbjct: 154 agggcggtggcggtggtggg 135
>gb|BC003324.1| Mus musculus cDNA sequence BC003324, mRNA (cDNA clone MGC:7036 IMAGE:3156139), complete cds Length = 1278 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 367 ctgcagcacctccctcagct 386 |||||||||||||||||||| Sbjct: 546 ctgcagcacctccctcagct 527
>ref|NM_030259.1| Mus musculus cDNA sequence BC003324 (BC003324), mRNA Length = 1278 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 367 ctgcagcacctccctcagct 386 |||||||||||||||||||| Sbjct: 546 ctgcagcacctccctcagct 527
>gb|AC127339.3| Mus musculus BAC clone RP23-180G16 from chromosome 5, complete sequence Length = 225376 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 367 ctgcagcacctccctcagct 386 |||||||||||||||||||| Sbjct: 212222 ctgcagcacctccctcagct 212241
>gb|BT012972.1| Lycopersicon esculentum clone 114182R, mRNA sequence Length = 2213 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 cataagactgataaattctg 68 |||||||||||||||||||| Sbjct: 1979 cataagactgataaattctg 1960
>emb|AJ251914.1|SSC251914 Sus scrofa MHC class I SLA genes, haplotype H01, clone BAC 493A6 Length = 158063 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 108 acagtaaccaaaatcaccacacat 131 |||||||||||||| ||||||||| Sbjct: 46198 acagtaaccaaaattaccacacat 46175
>gb|AC127313.3| Mus musculus BAC clone RP23-311A21 from 5, complete sequence Length = 195651 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 367 ctgcagcacctccctcagct 386 |||||||||||||||||||| Sbjct: 45944 ctgcagcacctccctcagct 45963
>emb|X61004.1|KPSCRK K.pneumoniae scrK gene for fructokinase Length = 1237 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 441 cgacgaaggcgtcgccggcgccggtggt 468 |||| ||||| ||||||||||||||||| Sbjct: 1038 cgacaaaggcatcgccggcgccggtggt 1011
>emb|AL356632.12| Human DNA sequence from clone RP11-7D5 on chromosome 10 Contains a ribosomal protein S3A (RPS3A) pseudogene, the PYCS gene for pyrroline-5-carboxylate synthetase (glutamate gamma-semialdehyde synthetase) (GSAS, P5CS), the gene for a novel protein (DKFZP564D116, FLJ40976), the 5' end of the ENTPD1 gene for ectonucleoside triphosphate diphosphohydrolase 1 and two CpG islands, complete sequence Length = 163166 Score = 40.1 bits (20), Expect = 6.4 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Minus Query: 295 ggtggcggtggtgggcagcgccgggatg 322 |||||||||||||| ||||||||||||| Sbjct: 89870 ggtggcggtggtgg-cagcgccgggatg 89844
>emb|AL355133.8| Human DNA sequence from clone RP11-54N6 on chromosome 20 Contains STSs and GSSs, complete sequence Length = 42303 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 19 ttttgataaattttgataaacttg 42 ||||||||||||| |||||||||| Sbjct: 38311 ttttgataaatttagataaacttg 38288
>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence Length = 2726152 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 274 cttgctgatgagctccaggg 293 |||||||||||||||||||| Sbjct: 1611806 cttgctgatgagctccaggg 1611825
>emb|AL138889.9| Human DNA sequence from clone RP3-468B3 on chromosome 6 Contains the 5' end of the MLN gene for motilin, part of a novel gene and a CpG island, complete sequence Length = 136886 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 204 taaaagtgcagctaaactcc 223 |||||||||||||||||||| Sbjct: 17442 taaaagtgcagctaaactcc 17423
>emb|AL121915.8|HSJ1193N1 Human DNA sequence from clone RP5-1193N1 on chromosome 20 Contains the LAMR1P1 gene for laminin receptor 1 pseudogene 1, complete sequence Length = 51859 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 7 aacagaacaagattttgataaatt 30 ||||||||||| |||||||||||| Sbjct: 51374 aacagaacaagcttttgataaatt 51397
>emb|Z34846.1|SSBAT1G S.scrofa BAT1 gene Length = 10674 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 108 acagtaaccaaaatcaccacacat 131 |||||||||||||| ||||||||| Sbjct: 8819 acagtaaccaaaattaccacacat 8796
>gb|AY113970.1| Arabidopsis thaliana unknown protein (At1g30750) mRNA, complete cds Length = 670 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 110 agtaaccaaaatcaccacac 129 |||||||||||||||||||| Sbjct: 87 agtaaccaaaatcaccacac 106
>gb|AY050922.1| Arabidopsis thaliana unknown protein (At1g30750) mRNA, complete cds Length = 822 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 110 agtaaccaaaatcaccacac 129 |||||||||||||||||||| Sbjct: 110 agtaaccaaaatcaccacac 129
>emb|AL939118.1|SCO939118 Streptomyces coelicolor A3(2) complete genome; segment 15/29 Length = 303550 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 452 tcgccggcgccggtggtgtc 471 |||||||||||||||||||| Sbjct: 280807 tcgccggcgccggtggtgtc 280788
>emb|AL606615.4|OSJN00048 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0086B14, complete sequence Length = 175698 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 14 caagattttgataaattttgataa 37 ||||||||||||| |||||||||| Sbjct: 16049 caagattttgatagattttgataa 16072
>emb|CR855302.6| Zebrafish DNA sequence from clone CH211-120A5 in linkage group 3, complete sequence Length = 182196 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 179 ctaaaactcaactcatacctaata 202 |||||||||||||||||| ||||| Sbjct: 159990 ctaaaactcaactcatacataata 160013
>gb|AC138665.11| Mus musculus chromosome 3, clone RP24-161I8, complete sequence Length = 168293 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 19 ttttgataaattttgataaa 38 |||||||||||||||||||| Sbjct: 13753 ttttgataaattttgataaa 13772
>gb|AC113416.2| Homo sapiens chromosome 5 clone RP11-560F8, complete sequence Length = 190848 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 130 atgcttgctttttattaagc 149 |||||||||||||||||||| Sbjct: 12985 atgcttgctttttattaagc 12966
>gb|AC113380.2| Homo sapiens chromosome 5 clone RP11-304B20, complete sequence Length = 143534 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 130 atgcttgctttttattaagc 149 |||||||||||||||||||| Sbjct: 29580 atgcttgctttttattaagc 29599
>gb|AC093181.5| Oryza sativa chromosome 10 BAC OSJNBb0089F16 genomic sequence, complete sequence Length = 154696 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 433 gagggagccgacgaaggcgtcgccggcg 460 ||||||||||||||||||| || ||||| Sbjct: 26105 gagggagccgacgaaggcgccggcggcg 26078
>gb|AF351608.1| Sus scrofa CRY (CRY) mRNA, complete cds Length = 1513 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 295 ggtggcggtggtgggcagcg 314 |||||||||||||||||||| Sbjct: 68 ggtggcggtggtgggcagcg 87
>dbj|AK133760.1| Mus musculus 8 days embryo whole body cDNA, RIKEN full-length enriched library, clone:5730407M15 product:similar to Hypothetical protein FLJ32372 (P40phox binding protein) [Homo sapiens], full insert sequence Length = 1335 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 367 ctgcagcacctccctcagct 386 |||||||||||||||||||| Sbjct: 678 ctgcagcacctccctcagct 659
>dbj|AK150252.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:G530149F13 product:similar to Hypothetical protein FLJ32372 (P40phox binding protein) [Homo sapiens], full insert sequence Length = 1122 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 367 ctgcagcacctccctcagct 386 |||||||||||||||||||| Sbjct: 649 ctgcagcacctccctcagct 630
>dbj|AK150123.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:G530133F06 product:similar to Hypothetical protein FLJ32372 (P40phox binding protein) [Homo sapiens], full insert sequence Length = 1123 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 367 ctgcagcacctccctcagct 386 |||||||||||||||||||| Sbjct: 650 ctgcagcacctccctcagct 631
>gb|DP000042.1| Lemur catta target 106 genomic scaffold Length = 452647 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 2 aagctaacagaacaagattt 21 |||||||||||||||||||| Sbjct: 325773 aagctaacagaacaagattt 325792
>gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete genome Length = 3570858 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 294 cggtggcggtggtgggcagc 313 |||||||||||||||||||| Sbjct: 165052 cggtggcggtggtgggcagc 165033
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 14 caagattttgataaattttgataa 37 ||||||||||||| |||||||||| Sbjct: 22412294 caagattttgatagattttgataa 22412317
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 291 gggcggtggcggtggtgggc 310 |||||||||||||||||||| Sbjct: 15607308 gggcggtggcggtggtgggc 15607327 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 433 gagggagccgacgaaggcgtcgccggcg 460 ||||||||||||||||||| || ||||| Sbjct: 10867995 gagggagccgacgaaggcgccggcggcg 10867968
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 287 tccagggcggtggcggtggtgggc 310 ||||||||||||||||||| |||| Sbjct: 15974811 tccagggcggtggcggtggagggc 15974788
>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome Length = 3304561 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 452 tcgccggcgccggtggtgtc 471 |||||||||||||||||||| Sbjct: 1014247 tcgccggcgccggtggtgtc 1014266
>gb|AC025907.2|AC025907 Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0094K20, complete sequence Length = 193119 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 291 gggcggtggcggtggtgggc 310 |||||||||||||||||||| Sbjct: 94674 gggcggtggcggtggtgggc 94693
>gb|AY787762.1| Streptomyces filamentosus strain NRRL 11379 daptomycin biosynthetic gene cluster, partial sequence Length = 127559 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 289 cagggcggtggcggtggtgg 308 |||||||||||||||||||| Sbjct: 70283 cagggcggtggcggtggtgg 70264
>gb|AC007060.3|T5I8 Arabidopsis thaliana chromosome 1 BAC T5I8 sequence, complete sequence Length = 96183 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 110 agtaaccaaaatcaccacac 129 |||||||||||||||||||| Sbjct: 80853 agtaaccaaaatcaccacac 80834
>ref|NM_213881.1| Sus scrofa CRY protein (CRY), mRNA Length = 1513 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 295 ggtggcggtggtgggcagcg 314 |||||||||||||||||||| Sbjct: 68 ggtggcggtggtgggcagcg 87
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome Length = 4659019 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 291 gggcggtggcggtggtgggcagcg 314 |||||| ||||||||||||||||| Sbjct: 1986506 gggcggaggcggtggtgggcagcg 1986529 Score = 40.1 bits (20), Expect = 6.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 439 gccgacgaaggcgtcgccggcgccggtggtgt 470 |||| |||||| |||||||| ||||||||||| Sbjct: 260643 gccgtcgaaggtgtcgccggtgccggtggtgt 260674
>dbj|AP003853.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0091E23 Length = 155939 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 287 tccagggcggtggcggtggtgggc 310 ||||||||||||||||||| |||| Sbjct: 66396 tccagggcggtggcggtggagggc 66373
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 292 ggcggtggcggtggtgggcagcgc 315 |||||||||||||| ||||||||| Sbjct: 5988162 ggcggtggcggtggcgggcagcgc 5988185
>dbj|AK121939.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033107D06, full insert sequence Length = 3100 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 291 gggcggtggcggtggtgggc 310 |||||||||||||||||||| Sbjct: 204 gggcggtggcggtggtgggc 223
>dbj|AK109451.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-117-E01, full insert sequence Length = 2482 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 433 gagggagccgacgaaggcgtcgccggcg 460 ||||||||||||||||||| || ||||| Sbjct: 226 gagggagccgacgaaggcgccggcggcg 199
>gb|DQ322651.1| Streptomyces sp. FR1 plasmid pFRL1, complete sequence Length = 54288 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 281 atgagctccagggcggtggcggtg 304 |||||||||||||||||| ||||| Sbjct: 26497 atgagctccagggcggtgtcggtg 26474
>gb|AF080235.1|AF080235 Streptomyces cyanogenus landomycin biosynthetic gene cluster, complete sequence Length = 34644 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 438 agccgacgaaggcgtcgccg 457 |||||||||||||||||||| Sbjct: 18941 agccgacgaaggcgtcgccg 18922
>gb|AC138585.14| Mus musculus chromosome 3, clone RP23-174P13, complete sequence Length = 209896 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 19 ttttgataaattttgataaa 38 |||||||||||||||||||| Sbjct: 37863 ttttgataaattttgataaa 37844
>gb|AC115945.9| Mus musculus chromosome 3, clone RP24-555P13, complete sequence Length = 172240 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 387 tggcctcattgtagaagatg 406 |||||||||||||||||||| Sbjct: 143951 tggcctcattgtagaagatg 143970
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 294 cggtggcggtggtgggcagc 313 |||||||||||||||||||| Sbjct: 4065930 cggtggcggtggtgggcagc 4065911
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 291 gggcggtggcggtggtgggc 310 |||||||||||||||||||| Sbjct: 15615549 gggcggtggcggtggtgggc 15615568 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 433 gagggagccgacgaaggcgtcgccggcg 460 ||||||||||||||||||| || ||||| Sbjct: 10874035 gagggagccgacgaaggcgccggcggcg 10874008
>emb|AM114786.1| Platynereis dumerilii mRNA for Pit1 protein Length = 1474 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 376 ctccctcagcttggcctcat 395 |||||||||||||||||||| Sbjct: 745 ctccctcagcttggcctcat 726
>emb|AL591782.1|SME591782 Sinorhizobium meliloti 1021 complete chromosome; segment 1/12 Length = 260050 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 452 tcgccggcgccggtggtgtc 471 |||||||||||||||||||| Sbjct: 195836 tcgccggcgccggtggtgtc 195817
>gb|AF494278.1| Chaetosphaeridium globosum chloroplast, complete genome Length = 131183 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 191 tcatacctaataataaaagt 210 |||||||||||||||||||| Sbjct: 115986 tcatacctaataataaaagt 115967
>emb|AL845548.7| Mouse DNA sequence from clone RP23-307N14 on chromosome 2, complete sequence Length = 142263 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 192 catacctaataataaaagtg 211 |||||||||||||||||||| Sbjct: 103740 catacctaataataaaagtg 103721
>emb|AL731838.19| Mouse DNA sequence from clone RP23-139O16 on chromosome X, complete sequence Length = 212472 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 117 aaaatcaccacacatgcttgctttttat 144 ||||| || ||||||||||||||||||| Sbjct: 112125 aaaataacaacacatgcttgctttttat 112152 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,129,073 Number of Sequences: 3902068 Number of extensions: 5129073 Number of successful extensions: 130459 Number of sequences better than 10.0: 105 Number of HSP's better than 10.0 without gapping: 108 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 127977 Number of HSP's gapped (non-prelim): 2474 length of query: 471 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 449 effective length of database: 17,147,199,772 effective search space: 7699092697628 effective search space used: 7699092697628 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)