ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart48f06
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1CO410_WHEAT (P46524) Dehydrin COR410 (Cold-induced COR410 protein) 85 9e-17
2ERD10_ARATH (P42759) Dehydrin ERD10 (Low-temperature-induced pro... 37 0.030
3COR47_ARATH (P31168) Dehydrin COR47 (Cold-induced COR47 protein) 36 0.066
4ERD14_ARATH (P42763) Dehydrin ERD14 34 0.19
5DHLEA_ARATH (Q96261) Probable dehydrin LEA 32 0.95
6TAS14_LYCES (P22240) Abscisic acid and environmental stress-indu... 32 1.2
7ECP44_DAUCA (Q9XJ56) Phosphoprotein ECPP44 32 1.2
8PHLA1_HUMAN (Q8WV24) Pleckstrin homology-like domain family A me... 31 2.1
9DHR21_ORYSA (P12253) Water stress-inducible protein Rab21 31 2.1
10DHN4_HORVU (P12949) Dehydrin DHN4 (B18) 30 2.8
11DHN3_HORVU (P12948) Dehydrin DHN3 (B17) 30 2.8
12DHLE_RAPSA (P21298) Late embryogenesis abundant protein (Protein... 30 2.8
13ECP40_DAUCA (Q07322) Embryogenic cell protein 40 (ECP40) 30 3.6
14CS66_WHEAT (P46526) Cold shock protein CS66 30 4.7
15CS120_WHEAT (P46525) Cold-shock protein CS120 30 4.7
16XERO2_ARATH (P42758) Dehydrin Xero 2 (Low-temperature-induced pr... 30 4.7
17SCG1_PIG (Q9GLG4) Secretogranin-1 precursor (Secretogranin I) (S... 29 6.2
18DH16B_ORYSA (P22911) Dehydrin Rab16B 29 6.2
19DHR15_WHEAT (Q00742) Dehydrin Rab15 29 8.1
20SMOC2_HUMAN (Q9H3U7) SPARC-related modular calcium-binding prote... 29 8.1
21DHN1_MAIZE (P12950) Dehydrin DHN1 (M3) (RAB-17 protein) 29 8.1
22COBL6_ARATH (O04500) COBRA-like protein 6 precursor 29 8.1
23K10_DROME (P13468) DNA-binding protein K10 (Female sterile prote... 29 8.1
24TRUB_LEGPA (Q5X1C5) tRNA pseudouridine synthase B (EC 5.4.99.-) ... 29 8.1

>CO410_WHEAT (P46524) Dehydrin COR410 (Cold-induced COR410 protein)|
          Length = 262

 Score = 85.1 bits (209), Expect = 9e-17
 Identities = 40/43 (93%), Positives = 41/43 (95%)
 Frame = -3

Query: 476 VSSPDAKEKKGLLGKIMDKLPGYHKTGEEDKAAAPSGEHKPRA 348
           VSSPDAKEKKGLLGKIMDKLPGYHKTGEEDKAAA +GEHKP A
Sbjct: 220 VSSPDAKEKKGLLGKIMDKLPGYHKTGEEDKAAAATGEHKPSA 262



 Score = 28.9 bits (63), Expect = 8.1
 Identities = 19/57 (33%), Positives = 25/57 (43%), Gaps = 6/57 (10%)
 Frame = -3

Query: 458 KEKKGLLGKIMDKLPGYHKTGEEDKAAAPSGEHKPRA*SPPCPET------HHRTSI 306
           K+KKGL  K+  KLPG+  T          GEH     +P  P +      HH T +
Sbjct: 107 KKKKGLKEKLQGKLPGHKDT---------EGEHVTGLPAPAAPASVQTHGGHHDTDV 154



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>ERD10_ARATH (P42759) Dehydrin ERD10 (Low-temperature-induced protein LTI45)|
          Length = 260

 Score = 37.0 bits (84), Expect = 0.030
 Identities = 17/27 (62%), Positives = 21/27 (77%), Gaps = 2/27 (7%)
 Frame = -3

Query: 458 KEKKGLLGKIMDKLPGYH--KTGEEDK 384
           +EKKG + KI +KLPGYH   TGEE+K
Sbjct: 228 EEKKGFMDKIKEKLPGYHAKTTGEEEK 254



 Score = 33.1 bits (74), Expect = 0.43
 Identities = 13/28 (46%), Positives = 20/28 (71%)
 Frame = -3

Query: 467 PDAKEKKGLLGKIMDKLPGYHKTGEEDK 384
           P+ +EKKG + KI +KLPG+ K  E+ +
Sbjct: 182 PEEEEKKGFMDKIKEKLPGHSKKPEDSQ 209



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>COR47_ARATH (P31168) Dehydrin COR47 (Cold-induced COR47 protein)|
          Length = 265

 Score = 35.8 bits (81), Expect = 0.066
 Identities = 17/25 (68%), Positives = 21/25 (84%), Gaps = 1/25 (4%)
 Frame = -3

Query: 458 KEKKGLLGKIMDKLPGYH-KTGEED 387
           +EKKG+L KI +KLPGYH KT EE+
Sbjct: 232 EEKKGILEKIKEKLPGYHAKTTEEE 256



 Score = 35.0 bits (79), Expect = 0.11
 Identities = 16/30 (53%), Positives = 20/30 (66%)
 Frame = -3

Query: 458 KEKKGLLGKIMDKLPGYHKTGEEDKAAAPS 369
           +EKKGL+ KI +KLPG+H    ED  A  S
Sbjct: 181 EEKKGLVEKIKEKLPGHHDEKAEDSPAVTS 210



 Score = 33.5 bits (75), Expect = 0.33
 Identities = 15/25 (60%), Positives = 21/25 (84%), Gaps = 1/25 (4%)
 Frame = -3

Query: 458 KEKKGLLGKIMDKLPGYH-KTGEED 387
           ++KKGL+ KI +KLPG+H KT E+D
Sbjct: 134 EDKKGLVEKIKEKLPGHHDKTAEDD 158



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>ERD14_ARATH (P42763) Dehydrin ERD14|
          Length = 185

 Score = 34.3 bits (77), Expect = 0.19
 Identities = 17/26 (65%), Positives = 20/26 (76%), Gaps = 2/26 (7%)
 Frame = -3

Query: 455 EKKGLLGKIMDKLPGYH--KTGEEDK 384
           EKKG+L KI +KLPGYH   T EE+K
Sbjct: 156 EKKGILEKIKEKLPGYHPKTTVEEEK 181



 Score = 32.7 bits (73), Expect = 0.56
 Identities = 19/46 (41%), Positives = 25/46 (54%)
 Frame = -3

Query: 458 KEKKGLLGKIMDKLPGYHKTGEEDKAAAPSGEHKPRA*SPPCPETH 321
           +EKKG + K+ +KLPG HK  E+  A A +    P    PP  E H
Sbjct: 113 EEKKGFMEKLKEKLPG-HKKPEDGSAVAAA----PVVVPPPVEEAH 153



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>DHLEA_ARATH (Q96261) Probable dehydrin LEA|
          Length = 185

 Score = 32.0 bits (71), Expect = 0.95
 Identities = 13/17 (76%), Positives = 15/17 (88%)
 Frame = -3

Query: 455 EKKGLLGKIMDKLPGYH 405
           EKKG+L KI DKLPG+H
Sbjct: 164 EKKGILEKIKDKLPGHH 180



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>TAS14_LYCES (P22240) Abscisic acid and environmental stress-inducible protein|
           TAS14 (Dehydrin TAS14)
          Length = 130

 Score = 31.6 bits (70), Expect = 1.2
 Identities = 16/31 (51%), Positives = 20/31 (64%), Gaps = 6/31 (19%)
 Frame = -3

Query: 458 KEKKGLLGKIMDKLPGYHK------TGEEDK 384
           + KKGL  KIM+K+PG H+      TGEE K
Sbjct: 86  RRKKGLKEKIMEKMPGQHEGEYGQTTGEEKK 116



 Score = 30.0 bits (66), Expect = 3.6
 Identities = 11/18 (61%), Positives = 15/18 (83%)
 Frame = -3

Query: 458 KEKKGLLGKIMDKLPGYH 405
           +EKKG++ KI DK+PG H
Sbjct: 113 EEKKGMMDKIKDKIPGMH 130



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>ECP44_DAUCA (Q9XJ56) Phosphoprotein ECPP44|
          Length = 258

 Score = 31.6 bits (70), Expect = 1.2
 Identities = 14/24 (58%), Positives = 19/24 (79%), Gaps = 1/24 (4%)
 Frame = -3

Query: 452 KKGLLGKIMDKLPGYH-KTGEEDK 384
           KKG+L KI +K+PGYH KT  E++
Sbjct: 182 KKGILEKIKEKIPGYHPKTSTEEE 205



 Score = 30.8 bits (68), Expect = 2.1
 Identities = 14/31 (45%), Positives = 20/31 (64%)
 Frame = -3

Query: 464 DAKEKKGLLGKIMDKLPGYHKTGEEDKAAAP 372
           + ++KKG + KI +KLPG  K  EE+  A P
Sbjct: 134 EPEKKKGFMEKIKEKLPGGGKKVEEETVAPP 164



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>PHLA1_HUMAN (Q8WV24) Pleckstrin homology-like domain family A member 1 (T-cell|
           death-associated gene 51 protein) (Apoptosis-associated
           nuclear protein) (Proline- and histidine-rich protein)
           (Proline- and glutamine-rich protein) (PQ-rich protein)
          Length = 259

 Score = 30.8 bits (68), Expect = 2.1
 Identities = 18/52 (34%), Positives = 27/52 (51%)
 Frame = +1

Query: 142 HPGPDSGPN*SPYTQTEHKHPSPNGLHRPDLQRRSIPPS*HGLKLKANTTHA 297
           HP P S P+  P+    H HP P+ +  P  Q  S P   HG +L  +T+++
Sbjct: 213 HPHPHSHPHSHPHP---HPHPHPHQIPHPHPQPHSQP---HGHRLLRSTSNS 258



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>DHR21_ORYSA (P12253) Water stress-inducible protein Rab21|
          Length = 172

 Score = 30.8 bits (68), Expect = 2.1
 Identities = 12/23 (52%), Positives = 17/23 (73%)
 Frame = -3

Query: 473 SSPDAKEKKGLLGKIMDKLPGYH 405
           ++ D  EKKG++ KI +KLPG H
Sbjct: 150 TTTDTGEKKGIMDKIKEKLPGQH 172



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>DHN4_HORVU (P12949) Dehydrin DHN4 (B18)|
          Length = 225

 Score = 30.4 bits (67), Expect = 2.8
 Identities = 12/20 (60%), Positives = 15/20 (75%)
 Frame = -3

Query: 464 DAKEKKGLLGKIMDKLPGYH 405
           D  EKKG++ KI +KLPG H
Sbjct: 206 DTGEKKGIMDKIKEKLPGQH 225



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>DHN3_HORVU (P12948) Dehydrin DHN3 (B17)|
          Length = 161

 Score = 30.4 bits (67), Expect = 2.8
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = -3

Query: 458 KEKKGLLGKIMDKLPGYHKTGEEDKAAAPSGEH 360
           + KKGL  KI +KLPG H  G++ +     G+H
Sbjct: 74  RRKKGLKDKIKEKLPGGH--GDQQQTGGTYGQH 104



 Score = 28.9 bits (63), Expect = 8.1
 Identities = 11/17 (64%), Positives = 14/17 (82%)
 Frame = -3

Query: 455 EKKGLLGKIMDKLPGYH 405
           EKKG++ KI +KLPG H
Sbjct: 145 EKKGIMDKIKEKLPGQH 161



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>DHLE_RAPSA (P21298) Late embryogenesis abundant protein (Protein LEA)|
          Length = 184

 Score = 30.4 bits (67), Expect = 2.8
 Identities = 12/17 (70%), Positives = 15/17 (88%)
 Frame = -3

Query: 455 EKKGLLGKIMDKLPGYH 405
           EKKG+L KI +KLPG+H
Sbjct: 164 EKKGILEKIKEKLPGHH 180



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>ECP40_DAUCA (Q07322) Embryogenic cell protein 40 (ECP40)|
          Length = 306

 Score = 30.0 bits (66), Expect = 3.6
 Identities = 12/17 (70%), Positives = 14/17 (82%)
 Frame = -3

Query: 455 EKKGLLGKIMDKLPGYH 405
           EKK +L KI DKLPG+H
Sbjct: 285 EKKSMLDKIKDKLPGHH 301



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>CS66_WHEAT (P46526) Cold shock protein CS66|
          Length = 469

 Score = 29.6 bits (65), Expect = 4.7
 Identities = 14/28 (50%), Positives = 18/28 (64%)
 Frame = -3

Query: 461 AKEKKGLLGKIMDKLPGYHKTGEEDKAA 378
           A EKKG++ KI +KLPG H   +E   A
Sbjct: 8   AGEKKGIMEKIKEKLPGGHGDHKETAGA 35



 Score = 28.9 bits (63), Expect = 8.1
 Identities = 12/17 (70%), Positives = 13/17 (76%)
 Frame = -3

Query: 455 EKKGLLGKIMDKLPGYH 405
           EKK L+ KI DKLPG H
Sbjct: 453 EKKSLMDKIKDKLPGQH 469



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>CS120_WHEAT (P46525) Cold-shock protein CS120|
          Length = 391

 Score = 29.6 bits (65), Expect = 4.7
 Identities = 15/32 (46%), Positives = 20/32 (62%)
 Frame = -3

Query: 461 AKEKKGLLGKIMDKLPGYHKTGEEDKAAAPSG 366
           A EKKG++ KI +KLPG H  G+  + A   G
Sbjct: 8   AGEKKGIMEKIKEKLPGGH--GDHKETAGTHG 37



 Score = 28.9 bits (63), Expect = 8.1
 Identities = 12/17 (70%), Positives = 13/17 (76%)
 Frame = -3

Query: 455 EKKGLLGKIMDKLPGYH 405
           EKK L+ KI DKLPG H
Sbjct: 375 EKKSLMDKIKDKLPGQH 391



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>XERO2_ARATH (P42758) Dehydrin Xero 2 (Low-temperature-induced protein LTI30)|
          Length = 193

 Score = 29.6 bits (65), Expect = 4.7
 Identities = 11/17 (64%), Positives = 15/17 (88%)
 Frame = -3

Query: 455 EKKGLLGKIMDKLPGYH 405
           +KKG+  KIM+KLPG+H
Sbjct: 11  QKKGITEKIMEKLPGHH 27



 Score = 28.9 bits (63), Expect = 8.1
 Identities = 10/17 (58%), Positives = 15/17 (88%)
 Frame = -3

Query: 455 EKKGLLGKIMDKLPGYH 405
           EKKG+  K+M++LPG+H
Sbjct: 65  EKKGMTEKVMEQLPGHH 81



 Score = 28.9 bits (63), Expect = 8.1
 Identities = 10/17 (58%), Positives = 15/17 (88%)
 Frame = -3

Query: 455 EKKGLLGKIMDKLPGYH 405
           EKKG+  K+M++LPG+H
Sbjct: 38  EKKGMTEKVMEQLPGHH 54



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>SCG1_PIG (Q9GLG4) Secretogranin-1 precursor (Secretogranin I) (SgI)|
           (Chromogranin B) (CgB) [Contains: Peptide SR-17; Peptide
           HQ-34; Peptide KR-11]
          Length = 668

 Score = 29.3 bits (64), Expect = 6.2
 Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 5/52 (9%)
 Frame = -3

Query: 470 SPDAKEKKGLLGKIMDKLPGYHKTGEEDKAAAPSGEHK-----PRA*SPPCP 330
           SP+   + G   ++ +K PG+ +  EE++       H+     PRA +PP P
Sbjct: 375 SPEQDRRVGASSELRNKGPGHSEESEEERGDEGQRHHRAWAGGPRADAPPDP 426



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>DH16B_ORYSA (P22911) Dehydrin Rab16B|
          Length = 164

 Score = 29.3 bits (64), Expect = 6.2
 Identities = 12/20 (60%), Positives = 15/20 (75%)
 Frame = -3

Query: 464 DAKEKKGLLGKIMDKLPGYH 405
           +A EKKG + KI +KLPG H
Sbjct: 145 NAGEKKGFMDKIKEKLPGQH 164



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>DHR15_WHEAT (Q00742) Dehydrin Rab15|
          Length = 149

 Score = 28.9 bits (63), Expect = 8.1
 Identities = 11/17 (64%), Positives = 14/17 (82%)
 Frame = -3

Query: 455 EKKGLLGKIMDKLPGYH 405
           EKKG++ KI +KLPG H
Sbjct: 133 EKKGIMDKIKEKLPGQH 149



 Score = 28.9 bits (63), Expect = 8.1
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = -3

Query: 458 KEKKGLLGKIMDKLPGYHKTGEEDKA 381
           + KKG+  KI +KLPG HK  ++  A
Sbjct: 72  RRKKGMKEKIKEKLPGGHKDNQQHMA 97



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>SMOC2_HUMAN (Q9H3U7) SPARC-related modular calcium-binding protein 2 precursor|
           (Secreted modular calcium-binding protein 2) (SMOC-2)
           (Smooth muscle-associated protein 2) (SMAP-2)
          Length = 446

 Score = 28.9 bits (63), Expect = 8.1
 Identities = 13/29 (44%), Positives = 19/29 (65%)
 Frame = -3

Query: 437 GKIMDKLPGYHKTGEEDKAAAPSGEHKPR 351
           G + +KLP    TG+ D AAAP+ E +P+
Sbjct: 155 GSVNEKLPQREGTGKTDDAAAPALETQPQ 183



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>DHN1_MAIZE (P12950) Dehydrin DHN1 (M3) (RAB-17 protein)|
          Length = 168

 Score = 28.9 bits (63), Expect = 8.1
 Identities = 11/17 (64%), Positives = 14/17 (82%)
 Frame = -3

Query: 455 EKKGLLGKIMDKLPGYH 405
           EKKG++ KI +KLPG H
Sbjct: 152 EKKGIMDKIKEKLPGQH 168



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>COBL6_ARATH (O04500) COBRA-like protein 6 precursor|
          Length = 454

 Score = 28.9 bits (63), Expect = 8.1
 Identities = 14/30 (46%), Positives = 18/30 (60%)
 Frame = -3

Query: 191 SVWVYGLQFGPESGPGCCLSLFAYYYGHFV 102
           +V VY  QF     P CC+SL A+YY + V
Sbjct: 217 AVCVYS-QFRSSPSPKCCVSLSAFYYQNIV 245



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>K10_DROME (P13468) DNA-binding protein K10 (Female sterile protein K10)|
          Length = 463

 Score = 28.9 bits (63), Expect = 8.1
 Identities = 16/43 (37%), Positives = 21/43 (48%)
 Frame = +1

Query: 130 KLKQHPGPDSGPN*SPYTQTEHKHPSPNGLHRPDLQRRSIPPS 258
           K +QHP P+     SP  Q   +HPSPN    P   ++  P S
Sbjct: 126 KQQQHPSPNQQQPPSPNQQ---QHPSPNQQQHPSPNQQQHPNS 165



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>TRUB_LEGPA (Q5X1C5) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA|
           pseudouridine 55 synthase) (Psi55 synthase)
           (tRNA-uridine isomerase) (tRNA pseudouridylate synthase)
          Length = 303

 Score = 28.9 bits (63), Expect = 8.1
 Identities = 13/38 (34%), Positives = 22/38 (57%)
 Frame = +2

Query: 101 TQSARNNKQINLNNIQDLTLDQTEARIPKLNTSIRHLT 214
           T    NN+   L+ +QD+ L Q  A +  ++ +I+HLT
Sbjct: 205 TAGFENNRMYTLDELQDMPLSQRLACLIPIDQAIQHLT 242


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 66,140,319
Number of Sequences: 219361
Number of extensions: 1430267
Number of successful extensions: 3776
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 3628
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3773
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3581144924
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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