ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart48f02
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_197602.1| Oryza sativa (japonica cultivar-group) putative... 103 5e-19
2gb|AC051633.7| Oryza sativa chromosome 10 BAC OSJNBb0015I11 geno... 103 5e-19
3dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 103 5e-19
4dbj|AB103350.1| Oryza sativa (japonica cultivar-group) GST mRNA ... 103 5e-19
5gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 103 5e-19
6ref|XM_470189.1| Oryza sativa (japonica cultivar-group), predic... 100 8e-18
7gb|AY533122.1| Oryza sativa (japonica cultivar-group) glutathion... 100 8e-18
8gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 100 8e-18
9gb|AC099399.2| Oryza sativa (japonica cultivar-group) chromosome... 100 8e-18
10dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 100 8e-18
11dbj|AK102889.1| Oryza sativa (japonica cultivar-group) cDNA clon... 100 8e-18
12gb|AF244679.1|AF244679 Zea mays glutathione S-transferase GST 14... 88 3e-14
13gb|AF244676.1|AF244676 Zea mays glutathione S-transferase GST 11... 74 4e-10
14gb|AY103672.1| Zea mays PCO064413 mRNA sequence 74 4e-10
15gb|AF244678.1|AF244678 Zea mays glutathione S-transferase GST 13... 58 3e-05
16gb|AY111699.1| Zea mays CL1117_-2 mRNA sequence 50 0.006
17ref|NM_015313.1| Homo sapiens Rho guanine nucleotide exchange fa... 44 0.39
18gb|AF180681.1|AF180681 Homo sapiens guanine nucleotide exchange ... 44 0.39
19dbj|AP000758.5| Homo sapiens genomic DNA, chromosome 11 clone:RP... 44 0.39
20ref|XM_715814.1| Candida albicans SC5314 translation initiation ... 42 1.5
21ref|XM_716327.1| Candida albicans SC5314 hypothetical protein (P... 42 1.5
22ref|XM_883675.1| Candida albicans SC5314 hypothetical protein (C... 42 1.5
23gb|CP000133.1| Rhizobium etli CFN 42, complete genome 42 1.5
24gb|AF244677.1|AF244677 Zea mays glutathione S-transferase GST 12... 42 1.5
25gb|AC064846.5| Homo sapiens BAC clone RP11-59C11 from 2, complet... 42 1.5
26emb|CR749743.13| Zebrafish DNA sequence from clone DKEY-97M3 in ... 42 1.5
27gb|AY103863.1| Zea mays PCO132785 mRNA sequence 42 1.5
28dbj|AP006852.1| Candida albicans genomic DNA, chromosome 7, comp... 42 1.5
29gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complet... 40 6.1
30emb|BX640443.1| Bordetella bronchiseptica strain RB50, complete ... 40 6.1
31emb|BX640430.1| Bordetella parapertussis strain 12822, complete ... 40 6.1
32emb|BX640419.1| Bordetella pertussis strain Tohama I, complete g... 40 6.1
33emb|AL606612.3|OSJN00043 Oryza sativa genomic DNA, chromosome 4,... 40 6.1
34gb|AC116529.16| Mus musculus chromosome 8, clone RP24-380O18, co... 40 6.1
35dbj|BA000038.2| Vibrio vulnificus YJ016 DNA, chromosome II, comp... 40 6.1
36gb|AY641412.1| Hordeum vulgare subsp. vulgare retrotransposon Sa... 40 6.1
37dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.1
38dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.1
39gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 6.1
40dbj|BA000016.3| Clostridium perfringens str. 13 DNA, complete ge... 40 6.1
41gb|AE016796.1| Vibrio vulnificus CMCP6 chromosome II, complete s... 40 6.1
42emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome 40 6.1
43gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 6.1
44emb|AL954364.5|CNS08CCZ Oryza sativa chromosome 12, . BAC OSJNBa... 40 6.1 
>ref|NM_197602.1| Oryza sativa (japonica cultivar-group) putative glutathione
           S-transferase (OSJNBb0015I11.25), mRNA
          Length = 1206

 Score =  103 bits (52), Expect = 5e-19
 Identities = 160/196 (81%)
 Strand = Plus / Minus

                                                                       
Query: 257 atcagaatggcgcctcggcggacgacgggcgctgcaggctcttgacgtacacccaggacc 316
           ||||||| || ||||||||||| | |||||| |  ||||||||||| | |  ||| ||| 
Sbjct: 925 atcagaagggagcctcggcggagggcgggcggttgaggctcttgacctgcttccacgact 866

                                                                       
Query: 317 cgcggctcgagacggcagtccaccagcggctgacgttcctgcgggactggatgaggcggg 376
           ||||||  |||||| | | |||||| ||||||||||| | ||||||||| |  |  ||| 
Sbjct: 865 cgcggccggagacgtcggcccaccaccggctgacgttgcggcgggactgcagcatccgga 806

                                                                       
Query: 377 cagtgcgctcgtcggaggcgaggcggtcggcgttgggcatgtgggagaggtcggcgaggg 436
             ||||||  ||||| ||||||||||||||||||||| | ||| || |||||||||||||
Sbjct: 805 gcgtgcgcgggtcggcggcgaggcggtcggcgttggggaggtgcgaaaggtcggcgaggg 746

                           
Query: 437 tgaacttgtcgccggc 452
           ||||||||||||||||
Sbjct: 745 tgaacttgtcgccggc 730
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>gb|AC051633.7| Oryza sativa chromosome 10 BAC OSJNBb0015I11 genomic sequence, complete
              sequence
          Length = 138824

 Score =  103 bits (52), Expect = 5e-19
 Identities = 160/196 (81%)
 Strand = Plus / Plus

                                                                          
Query: 257    atcagaatggcgcctcggcggacgacgggcgctgcaggctcttgacgtacacccaggacc 316
              ||||||| || ||||||||||| | |||||| |  ||||||||||| | |  ||| ||| 
Sbjct: 114156 atcagaagggagcctcggcggagggcgggcggttgaggctcttgacctgcttccacgact 114215

                                                                          
Query: 317    cgcggctcgagacggcagtccaccagcggctgacgttcctgcgggactggatgaggcggg 376
              ||||||  |||||| | | |||||| ||||||||||| | ||||||||| |  |  ||| 
Sbjct: 114216 cgcggccggagacgtcggcccaccaccggctgacgttgcggcgggactgcagcatccgga 114275

                                                                          
Query: 377    cagtgcgctcgtcggaggcgaggcggtcggcgttgggcatgtgggagaggtcggcgaggg 436
                ||||||  ||||| ||||||||||||||||||||| | ||| || |||||||||||||
Sbjct: 114276 gcgtgcgcgggtcggcggcgaggcggtcggcgttggggaggtgcgaaaggtcggcgaggg 114335

                              
Query: 437    tgaacttgtcgccggc 452
              ||||||||||||||||
Sbjct: 114336 tgaacttgtcgccggc 114351
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score =  103 bits (52), Expect = 5e-19
 Identities = 160/196 (81%)
 Strand = Plus / Plus

                                                                            
Query: 257      atcagaatggcgcctcggcggacgacgggcgctgcaggctcttgacgtacacccaggacc 316
                ||||||| || ||||||||||| | |||||| |  ||||||||||| | |  ||| ||| 
Sbjct: 20712704 atcagaagggagcctcggcggagggcgggcggttgaggctcttgacctgcttccacgact 20712763

                                                                            
Query: 317      cgcggctcgagacggcagtccaccagcggctgacgttcctgcgggactggatgaggcggg 376
                ||||||  |||||| | | |||||| ||||||||||| | ||||||||| |  |  ||| 
Sbjct: 20712764 cgcggccggagacgtcggcccaccaccggctgacgttgcggcgggactgcagcatccgga 20712823

                                                                            
Query: 377      cagtgcgctcgtcggaggcgaggcggtcggcgttgggcatgtgggagaggtcggcgaggg 436
                  ||||||  ||||| ||||||||||||||||||||| | ||| || |||||||||||||
Sbjct: 20712824 gcgtgcgcgggtcggcggcgaggcggtcggcgttggggaggtgcgaaaggtcggcgaggg 20712883

                                
Query: 437      tgaacttgtcgccggc 452
                ||||||||||||||||
Sbjct: 20712884 tgaacttgtcgccggc 20712899
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>dbj|AB103350.1| Oryza sativa (japonica cultivar-group) GST mRNA for glutathione
           S-transferase, complete cd
          Length = 1238

 Score =  103 bits (52), Expect = 5e-19
 Identities = 160/196 (81%)
 Strand = Plus / Minus

                                                                       
Query: 257 atcagaatggcgcctcggcggacgacgggcgctgcaggctcttgacgtacacccaggacc 316
           ||||||| || ||||||||||| | |||||| |  ||||||||||| | |  ||| ||| 
Sbjct: 925 atcagaagggagcctcggcggagggcgggcggttgaggctcttgacctgcttccacgact 866

                                                                       
Query: 317 cgcggctcgagacggcagtccaccagcggctgacgttcctgcgggactggatgaggcggg 376
           ||||||  |||||| | | |||||| ||||||||||| | ||||||||| |  |  ||| 
Sbjct: 865 cgcggccggagacgtcggcccaccaccggctgacgttgcggcgggactgcagcatccgga 806

                                                                       
Query: 377 cagtgcgctcgtcggaggcgaggcggtcggcgttgggcatgtgggagaggtcggcgaggg 436
             ||||||  ||||| ||||||||||||||||||||| | ||| || |||||||||||||
Sbjct: 805 gcgtgcgcgggtcggcggcgaggcggtcggcgttggggaggtgcgaaaggtcggcgaggg 746

                           
Query: 437 tgaacttgtcgccggc 452
           ||||||||||||||||
Sbjct: 745 tgaacttgtcgccggc 730
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score =  103 bits (52), Expect = 5e-19
 Identities = 160/196 (81%)
 Strand = Plus / Plus

                                                                            
Query: 257      atcagaatggcgcctcggcggacgacgggcgctgcaggctcttgacgtacacccaggacc 316
                ||||||| || ||||||||||| | |||||| |  ||||||||||| | |  ||| ||| 
Sbjct: 20723976 atcagaagggagcctcggcggagggcgggcggttgaggctcttgacctgcttccacgact 20724035

                                                                            
Query: 317      cgcggctcgagacggcagtccaccagcggctgacgttcctgcgggactggatgaggcggg 376
                ||||||  |||||| | | |||||| ||||||||||| | ||||||||| |  |  ||| 
Sbjct: 20724036 cgcggccggagacgtcggcccaccaccggctgacgttgcggcgggactgcagcatccgga 20724095

                                                                            
Query: 377      cagtgcgctcgtcggaggcgaggcggtcggcgttgggcatgtgggagaggtcggcgaggg 436
                  ||||||  ||||| ||||||||||||||||||||| | ||| || |||||||||||||
Sbjct: 20724096 gcgtgcgcgggtcggcggcgaggcggtcggcgttggggaggtgcgaaaggtcggcgaggg 20724155

                                
Query: 437      tgaacttgtcgccggc 452
                ||||||||||||||||
Sbjct: 20724156 tgaacttgtcgccggc 20724171
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>ref|XM_470189.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 960

 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 62/66 (93%)
 Strand = Plus / Minus

                                                                       
Query: 387 gtcggaggcgaggcggtcggcgttgggcatgtgggagaggtcggcgagggtgaacttgtc 446
           ||||||||||||||||||||||||||| | |||||| |||||||||| ||||||||||||
Sbjct: 711 gtcggaggcgaggcggtcggcgttggggaggtgggacaggtcggcgatggtgaacttgtc 652

                 
Query: 447 gccggc 452
           ||||||
Sbjct: 651 gccggc 646



 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 52/57 (91%)
 Strand = Plus / Minus

                                                                    
Query: 272 cggcggacgacgggcgctgcaggctcttgacgtacacccaggacccgcggctcgaga 328
           ||||||||| ||||||||||||||||||||||||| |||| ||| ||||||| ||||
Sbjct: 826 cggcggacggcgggcgctgcaggctcttgacgtactcccacgactcgcggctggaga 770
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>gb|AY533122.1| Oryza sativa (japonica cultivar-group) glutathione S-transferase
           GSTF14 mRNA, partial cds
          Length = 825

 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 62/66 (93%)
 Strand = Plus / Minus

                                                                       
Query: 387 gtcggaggcgaggcggtcggcgttgggcatgtgggagaggtcggcgagggtgaacttgtc 446
           ||||||||||||||||||||||||||| | |||||| |||||||||| ||||||||||||
Sbjct: 711 gtcggaggcgaggcggtcggcgttggggaggtgggacaggtcggcgatggtgaacttgtc 652

                 
Query: 447 gccggc 452
           ||||||
Sbjct: 651 gccggc 646



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 51/56 (91%)
 Strand = Plus / Minus

                                                                   
Query: 273 ggcggacgacgggcgctgcaggctcttgacgtacacccaggacccgcggctcgaga 328
           |||||||| ||||||||||||||||||||||||| |||| ||| ||||||| ||||
Sbjct: 825 ggcggacggcgggcgctgcaggctcttgacgtactcccacgactcgcggctggaga 770
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 62/66 (93%)
 Strand = Plus / Plus

                                                                           
Query: 387     gtcggaggcgaggcggtcggcgttgggcatgtgggagaggtcggcgagggtgaacttgtc 446
               ||||||||||||||||||||||||||| | |||||| |||||||||| ||||||||||||
Sbjct: 1919186 gtcggaggcgaggcggtcggcgttggggaggtgggacaggtcggcgatggtgaacttgtc 1919245

                     
Query: 447     gccggc 452
               ||||||
Sbjct: 1919246 gccggc 1919251



 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 52/57 (91%)
 Strand = Plus / Plus

                                                                        
Query: 272     cggcggacgacgggcgctgcaggctcttgacgtacacccaggacccgcggctcgaga 328
               ||||||||| ||||||||||||||||||||||||| |||| ||| ||||||| ||||
Sbjct: 1919071 cggcggacggcgggcgctgcaggctcttgacgtactcccacgactcgcggctggaga 1919127
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>gb|AC099399.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1006F06,
             complete sequence
          Length = 122218

 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 62/66 (93%)
 Strand = Plus / Minus

                                                                         
Query: 387   gtcggaggcgaggcggtcggcgttgggcatgtgggagaggtcggcgagggtgaacttgtc 446
             ||||||||||||||||||||||||||| | |||||| |||||||||| ||||||||||||
Sbjct: 56225 gtcggaggcgaggcggtcggcgttggggaggtgggacaggtcggcgatggtgaacttgtc 56166

                   
Query: 447   gccggc 452
             ||||||
Sbjct: 56165 gccggc 56160



 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 52/57 (91%)
 Strand = Plus / Minus

                                                                      
Query: 272   cggcggacgacgggcgctgcaggctcttgacgtacacccaggacccgcggctcgaga 328
             ||||||||| ||||||||||||||||||||||||| |||| ||| ||||||| ||||
Sbjct: 56340 cggcggacggcgggcgctgcaggctcttgacgtactcccacgactcgcggctggaga 56284
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 62/66 (93%)
 Strand = Plus / Plus

                                                                           
Query: 387     gtcggaggcgaggcggtcggcgttgggcatgtgggagaggtcggcgagggtgaacttgtc 446
               ||||||||||||||||||||||||||| | |||||| |||||||||| ||||||||||||
Sbjct: 1919184 gtcggaggcgaggcggtcggcgttggggaggtgggacaggtcggcgatggtgaacttgtc 1919243

                     
Query: 447     gccggc 452
               ||||||
Sbjct: 1919244 gccggc 1919249



 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 52/57 (91%)
 Strand = Plus / Plus

                                                                        
Query: 272     cggcggacgacgggcgctgcaggctcttgacgtacacccaggacccgcggctcgaga 328
               ||||||||| ||||||||||||||||||||||||| |||| ||| ||||||| ||||
Sbjct: 1919069 cggcggacggcgggcgctgcaggctcttgacgtactcccacgactcgcggctggaga 1919125
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>dbj|AK102889.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033112M16, full
           insert sequence
          Length = 1300

 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 62/66 (93%)
 Strand = Plus / Minus

                                                                       
Query: 387 gtcggaggcgaggcggtcggcgttgggcatgtgggagaggtcggcgagggtgaacttgtc 446
           ||||||||||||||||||||||||||| | |||||| |||||||||| ||||||||||||
Sbjct: 803 gtcggaggcgaggcggtcggcgttggggaggtgggacaggtcggcgatggtgaacttgtc 744

                 
Query: 447 gccggc 452
           ||||||
Sbjct: 743 gccggc 738



 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 52/57 (91%)
 Strand = Plus / Minus

                                                                    
Query: 272 cggcggacgacgggcgctgcaggctcttgacgtacacccaggacccgcggctcgaga 328
           ||||||||| ||||||||||||||||||||||||| |||| ||| ||||||| ||||
Sbjct: 918 cggcggacggcgggcgctgcaggctcttgacgtactcccacgactcgcggctggaga 862
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>gb|AF244679.1|AF244679 Zea mays glutathione S-transferase GST 14 mRNA, complete cds
          Length = 1007

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 86/100 (86%)
 Strand = Plus / Minus

                                                                       
Query: 345 gctgacgttcctgcgggactggatgaggcgggcagtgcgctcgtcggaggcgaggcggtc 404
           ||||||||||||||| ||||  |||||||| || |  |||  ||||  ||||||||||||
Sbjct: 732 gctgacgttcctgcgcgactccatgaggcgtgcggaccgcgggtcgccggcgaggcggtc 673

                                                   
Query: 405 ggcgttgggcatgtgggagaggtcggcgagggtgaacttg 444
           ||||||||||| |||||| ||||||||||| |||||||||
Sbjct: 672 ggcgttgggcaggtgggacaggtcggcgagcgtgaacttg 633



 Score = 48.1 bits (24), Expect = 0.025
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                               
Query: 257 atcagaatggcgcctcggcggacgacgggcgctgca 292
           ||||||| |||||||| ||||||| |||||||||||
Sbjct: 820 atcagaagggcgcctccgcggacggcgggcgctgca 785
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>gb|AF244676.1|AF244676 Zea mays glutathione S-transferase GST 11 mRNA, complete cds
          Length = 1279

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 142/177 (80%)
 Strand = Plus / Minus

                                                                       
Query: 276 ggacgacgggcgctgcaggctcttgacgtacacccaggacccgcggctcgagacggcagt 335
           ||||| ||||||||||||| |||||||||||  |||||   ||||||  |||||| |   
Sbjct: 836 ggacggcgggcgctgcagggtcttgacgtacttccaggtgtcgcggccggagacgtcgtg 777

                                                                       
Query: 336 ccaccagcggctgacgttcctgcgggactggatgaggcgggcagtgcgctcgtcggaggc 395
           |||||| | |||||||||| ||||||||| ||  | ||||   | ||||  ||||||| |
Sbjct: 776 ccaccacctgctgacgttcttgcgggactcgaacatgcggcgggagcgcgggtcggagac 717

                                                                    
Query: 396 gaggcggtcggcgttgggcatgtgggagaggtcggcgagggtgaacttgtcgccggc 452
           |||| |||| |||| ||||| ||| || |||||||||| |||||| |||||||||||
Sbjct: 716 gaggtggtccgcgtagggcaggtgcgacaggtcggcgatggtgaagttgtcgccggc 660
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>gb|AY103672.1| Zea mays PCO064413 mRNA sequence
          Length = 1195

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 142/177 (80%)
 Strand = Plus / Minus

                                                                       
Query: 276 ggacgacgggcgctgcaggctcttgacgtacacccaggacccgcggctcgagacggcagt 335
           ||||| ||||||||||||| |||||||||||  |||||   ||||||  |||||| |   
Sbjct: 841 ggacggcgggcgctgcagggtcttgacgtacttccaggtgtcgcggccggagacgtcgtg 782

                                                                       
Query: 336 ccaccagcggctgacgttcctgcgggactggatgaggcgggcagtgcgctcgtcggaggc 395
           |||||| | |||||||||| ||||||||| ||  | ||||   | ||||  ||||||| |
Sbjct: 781 ccaccacctgctgacgttcttgcgggactcgaacatgcggcgggagcgcgggtcggagac 722

                                                                    
Query: 396 gaggcggtcggcgttgggcatgtgggagaggtcggcgagggtgaacttgtcgccggc 452
           |||| |||| |||| ||||| ||| || |||||||||| |||||| |||||||||||
Sbjct: 721 gaggtggtccgcgtagggcaggtgcgacaggtcggcgatggtgaagttgtcgccggc 665
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>gb|AF244678.1|AF244678 Zea mays glutathione S-transferase GST 13 mRNA, complete cds
          Length = 1134

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 41/45 (91%)
 Strand = Plus / Minus

                                                        
Query: 408 gttgggcatgtgggagaggtcggcgagggtgaacttgtcgccggc 452
           |||||||| ||||||||||||||| |||||||| | |||||||||
Sbjct: 588 gttgggcaggtgggagaggtcggccagggtgaagtcgtcgccggc 544
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>gb|AY111699.1| Zea mays CL1117_-2 mRNA sequence
          Length = 633

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                            
Query: 417 gtgggagaggtcggcgagggtgaacttgtcgcc 449
           ||||||||||||||| |||||||||| ||||||
Sbjct: 281 gtgggagaggtcggccagggtgaactcgtcgcc 249
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>ref|NM_015313.1| Homo sapiens Rho guanine nucleotide exchange factor (GEF) 12
            (ARHGEF12), mRNA
          Length = 9501

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 18   aagcattttattacgcttatta 39
            ||||||||||||||||||||||
Sbjct: 9260 aagcattttattacgcttatta 9239
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>gb|AF180681.1|AF180681 Homo sapiens guanine nucleotide exchange factor (LARG) mRNA, complete
            cds
          Length = 9501

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 18   aagcattttattacgcttatta 39
            ||||||||||||||||||||||
Sbjct: 9260 aagcattttattacgcttatta 9239
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>dbj|AP000758.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-775A2, complete
             sequence
          Length = 163025

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 18    aagcattttattacgcttatta 39
             ||||||||||||||||||||||
Sbjct: 92264 aagcattttattacgcttatta 92243
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>ref|XM_715814.1| Candida albicans SC5314 translation initiation factor subunit eIF3
           (CaO19_13937), mRNA
          Length = 2220

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 201 atatggtgttgatggagctgt 221
           |||||||||||||||||||||
Sbjct: 381 atatggtgttgatggagctgt 401
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>ref|XM_716327.1| Candida albicans SC5314 hypothetical protein (PRT1) partial mRNA
          Length = 2220

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 201 atatggtgttgatggagctgt 221
           |||||||||||||||||||||
Sbjct: 381 atatggtgttgatggagctgt 401
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>ref|XM_883675.1| Candida albicans SC5314 hypothetical protein (CaJ7.0160) partial
           mRNA
          Length = 2220

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 201 atatggtgttgatggagctgt 221
           |||||||||||||||||||||
Sbjct: 381 atatggtgttgatggagctgt 401
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>gb|CP000133.1| Rhizobium etli CFN 42, complete genome
          Length = 4381608

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 89      gaaacacccatgccgatgaag 109
               |||||||||||||||||||||
Sbjct: 2581489 gaaacacccatgccgatgaag 2581509
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>gb|AF244677.1|AF244677 Zea mays glutathione S-transferase GST 12 mRNA, complete cds
          Length = 1198

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                    
Query: 412 ggcatgtgggagaggtcggcgagggtgaacttgtcgccggc 452
           |||| ||||||||||||||| || ||||| | |||||||||
Sbjct: 627 ggcaggtgggagaggtcggccagtgtgaagtcgtcgccggc 587
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>gb|AC064846.5| Homo sapiens BAC clone RP11-59C11 from 2, complete sequence
          Length = 169988

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 292    aggctcttgacgtacacccag 312
              |||||||||||||||||||||
Sbjct: 145115 aggctcttgacgtacacccag 145095
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>emb|CR749743.13| Zebrafish DNA sequence from clone DKEY-97M3 in linkage group 4,
             complete sequence
          Length = 177044

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 22    attttattacgcttattatta 42
             |||||||||||||||||||||
Sbjct: 18154 attttattacgcttattatta 18134
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>gb|AY103863.1| Zea mays PCO132785 mRNA sequence
          Length = 959

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                    
Query: 412 ggcatgtgggagaggtcggcgagggtgaacttgtcgccggc 452
           |||| ||||||||||||||| || ||||| | |||||||||
Sbjct: 650 ggcaggtgggagaggtcggccagtgtgaagtcgtcgccggc 610
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>dbj|AP006852.1| Candida albicans genomic DNA, chromosome 7, complete sequence
          Length = 949626

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 201    atatggtgttgatggagctgt 221
              |||||||||||||||||||||
Sbjct: 304993 atatggtgttgatggagctgt 304973
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>gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complete sequence
          Length = 2580084

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 236     cgacggcgatcgcgcatgga 255
               ||||||||||||||||||||
Sbjct: 1210101 cgacggcgatcgcgcatgga 1210120
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>emb|BX640443.1| Bordetella bronchiseptica strain RB50, complete genome; segment 7/16
          Length = 346274

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 392   aggcgaggcggtcggcgttg 411
             ||||||||||||||||||||
Sbjct: 56234 aggcgaggcggtcggcgttg 56253
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>emb|BX640430.1| Bordetella parapertussis strain 12822, complete genome; segment 8/14
          Length = 348014

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 392    aggcgaggcggtcggcgttg 411
              ||||||||||||||||||||
Sbjct: 320125 aggcgaggcggtcggcgttg 320144
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>emb|BX640419.1| Bordetella pertussis strain Tohama I, complete genome; segment 9/12
          Length = 349672

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 392    aggcgaggcggtcggcgttg 411
              ||||||||||||||||||||
Sbjct: 163084 aggcgaggcggtcggcgttg 163065
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>emb|AL606612.3|OSJN00043 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0021I10,
             complete sequence
          Length = 105538

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 225   cagcaccttctcgacggcgatcgcgcat 252
             ||||||||||||||| |||||| |||||
Sbjct: 68932 cagcaccttctcgacagcgatcacgcat 68905
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>gb|AC116529.16| Mus musculus chromosome 8, clone RP24-380O18, complete sequence
          Length = 166863

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 212   atggagctgtgggcagcacc 231
             ||||||||||||||||||||
Sbjct: 49000 atggagctgtgggcagcacc 49019
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>dbj|BA000038.2| Vibrio vulnificus YJ016 DNA, chromosome II, complete sequence
          Length = 1857073

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 193    tgccacggatatggtgttgatgga 216
              |||| |||||||||||||||||||
Sbjct: 324165 tgccgcggatatggtgttgatgga 324188
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>gb|AY641412.1| Hordeum vulgare subsp. vulgare retrotransposon Sandra5, complete
             sequence; splicing factor SF2-like protein (SF2) and
             universal stress protein (USP1) genes and Hv
             receptor-kinase-like pseudogene, complete cds; and
             retrotransposons Sandra6 and Sandra7, complete sequence
          Length = 82293

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 388   tcggaggcgaggcggtcggcgttg 411
             |||||||||||| |||||||||||
Sbjct: 52772 tcggaggcgaggtggtcggcgttg 52795
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4,
              complete sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 225    cagcaccttctcgacggcgatcgcgcat 252
              ||||||||||||||| |||||| |||||
Sbjct: 756792 cagcaccttctcgacagcgatcacgcat 756765
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 380     tgcgctcgtcggaggcgaggcggtcggc 407
               |||||||||||| |||||||||| ||||
Sbjct: 2286655 tgcgctcgtcggtggcgaggcgggcggc 2286682
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 380     tgcgctcgtcggaggcgagg 399
               ||||||||||||||||||||
Sbjct: 1961481 tgcgctcgtcggaggcgagg 1961462
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>dbj|BA000016.3| Clostridium perfringens str. 13 DNA, complete genome
          Length = 3031430

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 14      gggaaagcattttattacgcttattatt 41
               ||||||||||| ||||| ||||||||||
Sbjct: 1632768 gggaaagcattctattaagcttattatt 1632741
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>gb|AE016796.1| Vibrio vulnificus CMCP6 chromosome II, complete sequence
          Length = 1844853

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 193     tgccacggatatggtgttgatgga 216
               |||| |||||||||||||||||||
Sbjct: 1598730 tgccgcggatatggtgttgatgga 1598753
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>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome
          Length = 2595221

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 89     gaaacacccatgccgatgaagaagaacg 116
              ||||||||||| ||||||| ||||||||
Sbjct: 459119 gaaacacccatcccgatgaggaagaacg 459092
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 380     tgcgctcgtcggaggcgaggcggtcggc 407
               |||||||||||| |||||||||| ||||
Sbjct: 2286599 tgcgctcgtcggtggcgaggcgggcggc 2286626
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>emb|AL954364.5|CNS08CCZ Oryza sativa chromosome 12, . BAC OSJNBa0023M16 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 156258

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 380   tgcgctcgtcggaggcgaggcggtcggc 407
             |||||||||||| |||||||||| ||||
Sbjct: 11846 tgcgctcgtcggtggcgaggcgggcggc 11873


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,057,994
Number of Sequences: 3902068
Number of extensions: 3057994
Number of successful extensions: 56685
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 56230
Number of HSP's gapped (non-prelim): 454
length of query: 452
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 430
effective length of database: 17,147,199,772
effective search space: 7373295901960
effective search space used: 7373295901960
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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