ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart48e07
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 232 6e-58
2dbj|AP003522.3| Oryza sativa (japonica cultivar-group) genomic D... 232 6e-58
3dbj|AK059089.1| Oryza sativa (japonica cultivar-group) cDNA clon... 232 6e-58
4gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 50 0.005
5dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.005
6gb|AC134235.2| Oryza sativa (japonica cultivar-group) chromosome... 50 0.005
7emb|AL162500.15| Human DNA sequence from clone RP11-318K19 on ch... 44 0.29
8emb|CR450848.13| Zebrafish DNA sequence from clone CH211-149E23 ... 44 0.29
9emb|AL732516.6| Mouse DNA sequence from clone RP23-403H17 on chr... 44 0.29
10emb|AL928863.14| Zebrafish DNA sequence from clone CH211-152B13,... 44 0.29
11gb|AC154611.2| Mus musculus BAC clone RP23-335I9 from 13, comple... 44 0.29
12gb|AC109186.7| Mus musculus chromosome 5, clone RP24-351E22, com... 42 1.1
13gb|AC098710.2| Mus musculus BAC clone RP23-1L15 from 5, complete... 42 1.1
14gb|DP000006.1| Oryctolagus cuniculus target 1 genomic scaffold 42 1.1
15gb|AC153100.3| Oryctolagus cuniculus clone LB1-192J7, complete s... 42 1.1
16dbj|BA000021.3| Wigglesworthia glossinidia endosymbiont of Gloss... 42 1.1
17gb|AE001425.1| Plasmodium falciparum 3D7 chromosome 2 section 62... 40 4.5
18gb|AE017354.1| Legionella pneumophila subsp. pneumophila str. Ph... 40 4.5
19gb|AC158787.14| Mus musculus chromosome 15, clone RP23-136G8, co... 40 4.5
20gb|AY293579.1| Francisella tularensis subsp. novicida strain U11... 40 4.5
21ref|XM_414461.1| PREDICTED: Gallus gallus similar to FLJ00023 pr... 40 4.5
22ref|XM_543995.2| PREDICTED: Canis familiaris similar to Arsenite... 40 4.5
23emb|CR293520.5| Zebrafish DNA sequence from clone CH211-150J10 i... 40 4.5
24ref|XM_541709.2| PREDICTED: Canis familiaris similar to potassiu... 40 4.5
25ref|XM_661428.1| Cryptosporidium hominis TU502 hypothetical prot... 40 4.5
26emb|BX296557.35| Zebrafish DNA sequence from clone CH211-284O1 i... 40 4.5
27emb|AL662814.5| Human DNA sequence from clone RP11-368E13 on chr... 40 4.5
28emb|AL591686.10| Human DNA sequence from clone RP11-561I11 on ch... 40 4.5
29gb|AE014816.1| Plasmodium falciparum 3D7 chromosome 14 section 1... 40 4.5
30emb|BX842647.1| Bdellovibrio bacteriovorus complete genome, stra... 40 4.5
31emb|BX538352.1| Cryptosporidium parvum chromosome 6, complete se... 40 4.5
32gb|AC161890.4| Mus musculus 6 BAC RP23-356P12 (Roswell Park Canc... 40 4.5
33gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome 40 4.5
34emb|BX537263.17| Zebrafish DNA sequence from clone DKEY-208G1 in... 40 4.5
35ref|XM_627293.1| Cryptosporidium parvum Iowa II hypothetical pro... 40 4.5
36gb|AC153576.3| Mus musculus 6 BAC RP23-330J17 (Roswell Park Canc... 40 4.5
37emb|BX933213.2| Gallus gallus finished cDNA, clone ChEST509d9 40 4.5
38emb|BX294669.8| Zebrafish DNA sequence from clone CH211-134K13 i... 40 4.5
39gb|AC008583.6| Homo sapiens chromosome 3 clone CTC-501D11, compl... 40 4.5
40dbj|AB064261.1| Plasmodium falciparum fulmal2 mRNA, complete cds 40 4.5
41gb|AC114261.2| Dictyostelium discoideum chromosome 2 map 126059-... 40 4.5
42emb|AL773505.5| Mouse DNA sequence from clone RP23-209M19 on chr... 40 4.5
43emb|AM233362.1| Francisella tularensis subsp. holarctica strain ... 40 4.5
44emb|AJ749949.1| Francisella tularensis subsp. tularensis SCHU S4... 40 4.5
45emb|AL954132.14| Zebrafish DNA sequence from clone DKEY-32N7, co... 40 4.5
46dbj|AP004954.1| Lotus japonicus genomic DNA, chromosome 4, clone... 40 4.5

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score =  232 bits (117), Expect = 6e-58
 Identities = 189/213 (88%)
 Strand = Plus / Plus

                                                                            
Query: 100      tcatgtttccttgggtatggctgtaaggggggtgactaaagataacaccaccccacactt 159
                |||| ||||||||||||||||| | |||||| | |||| |||||||||||||||||||||
Sbjct: 10686901 tcatatttccttgggtatggctttgagggggttaactagagataacaccaccccacactt 10686960

                                                                            
Query: 160      ctctgtcatgtctatcccagtctccttgacgtccgcaggaagctcccactcgaaccgatg 219
                ||| |||||||||||||||  ||||||  | ||||| |||||||||||||||||||||||
Sbjct: 10686961 ctccgtcatgtctatcccaccctcctttgcatccgccggaagctcccactcgaaccgatg 10687020

                                                                            
Query: 220      gagcagcgtgccaagaatcaggggtatcagcttctgagcaagcggcatcccggggcagat 279
                ||| |||||||| |  || |||||||| ||||||||||||||||||||||||||||||||
Sbjct: 10687021 gagtagcgtgccgatgatgaggggtatgagcttctgagcaagcggcatcccggggcagat 10687080

                                                 
Query: 280      gcgtcggccaagaccgaacgggatcatctcgaa 312
                ||| ||||| || ||||| |||||||| |||||
Sbjct: 10687081 gcgccggccgaggccgaaggggatcatttcgaa 10687113



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>dbj|AP003522.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0036B02
          Length = 168253

 Score =  232 bits (117), Expect = 6e-58
 Identities = 189/213 (88%)
 Strand = Plus / Plus

                                                                         
Query: 100   tcatgtttccttgggtatggctgtaaggggggtgactaaagataacaccaccccacactt 159
             |||| ||||||||||||||||| | |||||| | |||| |||||||||||||||||||||
Sbjct: 39964 tcatatttccttgggtatggctttgagggggttaactagagataacaccaccccacactt 40023

                                                                         
Query: 160   ctctgtcatgtctatcccagtctccttgacgtccgcaggaagctcccactcgaaccgatg 219
             ||| |||||||||||||||  ||||||  | ||||| |||||||||||||||||||||||
Sbjct: 40024 ctccgtcatgtctatcccaccctcctttgcatccgccggaagctcccactcgaaccgatg 40083

                                                                         
Query: 220   gagcagcgtgccaagaatcaggggtatcagcttctgagcaagcggcatcccggggcagat 279
             ||| |||||||| |  || |||||||| ||||||||||||||||||||||||||||||||
Sbjct: 40084 gagtagcgtgccgatgatgaggggtatgagcttctgagcaagcggcatcccggggcagat 40143

                                              
Query: 280   gcgtcggccaagaccgaacgggatcatctcgaa 312
             ||| ||||| || ||||| |||||||| |||||
Sbjct: 40144 gcgccggccgaggccgaaggggatcatttcgaa 40176



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>dbj|AK059089.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-022-B08, full
            insert sequence
          Length = 1743

 Score =  232 bits (117), Expect = 6e-58
 Identities = 189/213 (88%)
 Strand = Plus / Minus

                                                                        
Query: 100  tcatgtttccttgggtatggctgtaaggggggtgactaaagataacaccaccccacactt 159
            |||| ||||||||||||||||| | |||||| | |||| |||||||||||||||||||||
Sbjct: 1615 tcatatttccttgggtatggctttgagggggttaactagagataacaccaccccacactt 1556

                                                                        
Query: 160  ctctgtcatgtctatcccagtctccttgacgtccgcaggaagctcccactcgaaccgatg 219
            ||| |||||||||||||||  ||||||  | ||||| |||||||||||||||||||||||
Sbjct: 1555 ctccgtcatgtctatcccaccctcctttgcatccgccggaagctcccactcgaaccgatg 1496

                                                                        
Query: 220  gagcagcgtgccaagaatcaggggtatcagcttctgagcaagcggcatcccggggcagat 279
            ||| |||||||| |  || |||||||| ||||||||||||||||||||||||||||||||
Sbjct: 1495 gagtagcgtgccgatgatgaggggtatgagcttctgagcaagcggcatcccggggcagat 1436

                                             
Query: 280  gcgtcggccaagaccgaacgggatcatctcgaa 312
            ||| ||||| || ||||| |||||||| |||||
Sbjct: 1435 gcgccggccgaggccgaaggggatcatttcgaa 1403



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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                    
Query: 152     ccacacttctctgtcatgtctatcccagtctccttga 188
               ||||| || |||||||||||||| |||||||||||||
Sbjct: 7867925 ccacatttttctgtcatgtctataccagtctccttga 7867961



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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                    
Query: 152     ccacacttctctgtcatgtctatcccagtctccttga 188
               ||||| || |||||||||||||| |||||||||||||
Sbjct: 7865760 ccacatttttctgtcatgtctataccagtctccttga 7865796



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>gb|AC134235.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBa0030J04, complete sequence
          Length = 153431

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                  
Query: 152   ccacacttctctgtcatgtctatcccagtctccttga 188
             ||||| || |||||||||||||| |||||||||||||
Sbjct: 53523 ccacatttttctgtcatgtctataccagtctccttga 53559



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>emb|AL162500.15| Human DNA sequence from clone RP11-318K19 on chromosome 13 Contains part
              of the UGCGL2 gene for UDP-glucose ceramide
              glucosyltransferase-like 2 (HUGT2 FLJ10873 FLJ11485), a
              novel gene and two CpG islands, complete sequence
          Length = 128554

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 19     ttaataatatttttccttacagatct 44
              |||||||||||||||||| |||||||
Sbjct: 103539 ttaataatatttttccttccagatct 103514



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>emb|CR450848.13| Zebrafish DNA sequence from clone CH211-149E23 in linkage group 15,
             complete sequence
          Length = 191457

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 14    tttatttaataatatttttcct 35
             ||||||||||||||||||||||
Sbjct: 68016 tttatttaataatatttttcct 67995



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>emb|AL732516.6| Mouse DNA sequence from clone RP23-403H17 on chromosome 11 Contains a
             novel gene, complete sequence
          Length = 99659

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 7     attctggtttatttaataatattttt 32
             |||| |||||||||||||||||||||
Sbjct: 70115 attcaggtttatttaataatattttt 70090



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>emb|AL928863.14| Zebrafish DNA sequence from clone CH211-152B13, complete sequence
          Length = 142564

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 14     tttatttaataatatttttcct 35
              ||||||||||||||||||||||
Sbjct: 121549 tttatttaataatatttttcct 121570



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>gb|AC154611.2| Mus musculus BAC clone RP23-335I9 from 13, complete sequence
          Length = 182452

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 14     tttatttaataatatttttcct 35
              ||||||||||||||||||||||
Sbjct: 103459 tttatttaataatatttttcct 103438



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>gb|AC109186.7| Mus musculus chromosome 5, clone RP24-351E22, complete sequence
          Length = 174202

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 5     aaattctggtttatttaataa 25
             |||||||||||||||||||||
Sbjct: 98474 aaattctggtttatttaataa 98494



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>gb|AC098710.2| Mus musculus BAC clone RP23-1L15 from 5, complete sequence
          Length = 213811

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 5      aaattctggtttatttaataa 25
              |||||||||||||||||||||
Sbjct: 169565 aaattctggtttatttaataa 169545



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>gb|DP000006.1| Oryctolagus cuniculus target 1 genomic scaffold
          Length = 1889755

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 94     tacaagtcatgtttccttggg 114
              |||||||||||||||||||||
Sbjct: 873139 tacaagtcatgtttccttggg 873159



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>gb|AC153100.3| Oryctolagus cuniculus clone LB1-192J7, complete sequence
          Length = 132131

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 94    tacaagtcatgtttccttggg 114
             |||||||||||||||||||||
Sbjct: 39359 tacaagtcatgtttccttggg 39379



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>dbj|BA000021.3| Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis DNA,
              complete genome
          Length = 697724

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 9      tctggtttatttaataatatt 29
              |||||||||||||||||||||
Sbjct: 446128 tctggtttatttaataatatt 446108



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>gb|AE001425.1| Plasmodium falciparum 3D7 chromosome 2 section 62 of 73 of the
            complete sequence
          Length = 11829

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 13   gtttatttaataatattttt 32
            ||||||||||||||||||||
Sbjct: 8554 gtttatttaataatattttt 8573



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>gb|AE017354.1| Legionella pneumophila subsp. pneumophila str. Philadelphia 1, complete
               genome
          Length = 3397754

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 4       aaaattctggtttatttaat 23
               ||||||||||||||||||||
Sbjct: 1689979 aaaattctggtttatttaat 1689998



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>gb|AC158787.14| Mus musculus chromosome 15, clone RP23-136G8, complete sequence
          Length = 203772

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 148   caccccacacttctctgtcatgtc 171
             ||||||||||||||||||| ||||
Sbjct: 30001 caccccacacttctctgtcctgtc 29978



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>gb|AY293579.1| Francisella tularensis subsp. novicida strain U112 pathogenicity
            island, complete sequence
          Length = 25991

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 5    aaattctggtttatttaata 24
            ||||||||||||||||||||
Sbjct: 8718 aaattctggtttatttaata 8737



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>ref|XM_414461.1| PREDICTED: Gallus gallus similar to FLJ00023 protein (LOC416129),
            mRNA
          Length = 1024

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 14   tttatttaataatatttttc 33
            ||||||||||||||||||||
Sbjct: 1010 tttatttaataatatttttc 991



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>ref|XM_543995.2| PREDICTED: Canis familiaris similar to Arsenite methyltransferase
           (S-adenosyl-L-methionine:arsenic(III) methyltransferase)
           (Methylarsonite methyltransferase) (Cyt19) (LOC486865),
           mRNA
          Length = 987

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 161 tctgtcatgtctatcccagt 180
           ||||||||||||||||||||
Sbjct: 176 tctgtcatgtctatcccagt 157



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>emb|CR293520.5| Zebrafish DNA sequence from clone CH211-150J10 in linkage group 7,
              complete sequence
          Length = 168537

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 13     gtttatttaataatattttt 32
              ||||||||||||||||||||
Sbjct: 161204 gtttatttaataatattttt 161185



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>ref|XM_541709.2| PREDICTED: Canis familiaris similar to potassium channel
           tetramerisation domain containing 15 (LOC484595), mRNA
          Length = 852

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 185 ttgacgtccgcaggaagctc 204
           ||||||||||||||||||||
Sbjct: 361 ttgacgtccgcaggaagctc 342



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>ref|XM_661428.1| Cryptosporidium hominis TU502 hypothetical protein (Chro.80462)
           partial mRNA
          Length = 2361

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 1   aacaaaattctggtttattt 20
           ||||||||||||||||||||
Sbjct: 183 aacaaaattctggtttattt 164



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>emb|BX296557.35| Zebrafish DNA sequence from clone CH211-284O1 in linkage group 7,
              complete sequence
          Length = 173360

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 13     gtttatttaataatattttt 32
              ||||||||||||||||||||
Sbjct: 147353 gtttatttaataatattttt 147372



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>emb|AL662814.5| Human DNA sequence from clone RP11-368E13 on chromosome X, complete
             sequence
          Length = 74571

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 15    ttatttaataatatttttcc 34
             ||||||||||||||||||||
Sbjct: 25819 ttatttaataatatttttcc 25838



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>emb|AL591686.10| Human DNA sequence from clone RP11-561I11 on chromosome 1 Contains the
             3' end of a novel gene (FLJ40773) and two novel genes,
             complete sequence
          Length = 175463

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 5     aaattctggtttatttaataatattttt 32
             ||||| |||||| |||||||||||||||
Sbjct: 76103 aaattttggtttgtttaataatattttt 76076



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>gb|AE014816.1| Plasmodium falciparum 3D7 chromosome 14 section 1 of 13 of the complete
             sequence
          Length = 250029

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 16    tatttaataatatttttccttaca 39
             |||| |||||||||||||||||||
Sbjct: 37293 tattaaataatatttttccttaca 37316



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>emb|BX842647.1| Bdellovibrio bacteriovorus complete genome, strain HD100; segment 2/11
          Length = 346357

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 210   cgaaccgatggagcagcgtg 229
             ||||||||||||||||||||
Sbjct: 26449 cgaaccgatggagcagcgtg 26468



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>emb|BX538352.1| Cryptosporidium parvum chromosome 6, complete sequence; segment 3/4
          Length = 293050

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 18    tttaataatatttttcctta 37
             ||||||||||||||||||||
Sbjct: 68741 tttaataatatttttcctta 68722



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>gb|AC161890.4| Mus musculus 6 BAC RP23-356P12 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 243990

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 246    tcagcttctgagcaagcggcatcc 269
              |||||||||||| |||||||||||
Sbjct: 160844 tcagcttctgagtaagcggcatcc 160821



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>gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome
          Length = 2932766

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 261    gcggcatcccggggcagatg 280
              ||||||||||||||||||||
Sbjct: 504963 gcggcatcccggggcagatg 504982



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>emb|BX537263.17| Zebrafish DNA sequence from clone DKEY-208G1 in linkage group 14,
             complete sequence
          Length = 166940

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 13    gtttatttaataatattttt 32
             ||||||||||||||||||||
Sbjct: 30473 gtttatttaataatattttt 30454



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>ref|XM_627293.1| Cryptosporidium parvum Iowa II hypothetical protein (cgd8_4020),
           partial mRNA
          Length = 2352

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 1   aacaaaattctggtttattt 20
           ||||||||||||||||||||
Sbjct: 183 aacaaaattctggtttattt 164



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>gb|AC153576.3| Mus musculus 6 BAC RP23-330J17 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 215953

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 246    tcagcttctgagcaagcggcatcc 269
              |||||||||||| |||||||||||
Sbjct: 196845 tcagcttctgagtaagcggcatcc 196868



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>emb|BX933213.2| Gallus gallus finished cDNA, clone ChEST509d9
          Length = 753

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 14  tttatttaataatatttttc 33
           ||||||||||||||||||||
Sbjct: 744 tttatttaataatatttttc 725



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>emb|BX294669.8| Zebrafish DNA sequence from clone CH211-134K13 in linkage group 9,
            complete sequence
          Length = 180734

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 13   gtttatttaataatattttt 32
            ||||||||||||||||||||
Sbjct: 4145 gtttatttaataatattttt 4126



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>gb|AC008583.6| Homo sapiens chromosome 3 clone CTC-501D11, complete sequence
          Length = 122493

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 160   ctctgtcatgtctatcccag 179
             ||||||||||||||||||||
Sbjct: 49173 ctctgtcatgtctatcccag 49154



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>dbj|AB064261.1| Plasmodium falciparum fulmal2 mRNA, complete cds
          Length = 2460

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 13  gtttatttaataatattttt 32
           ||||||||||||||||||||
Sbjct: 782 gtttatttaataatattttt 763



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>gb|AC114261.2| Dictyostelium discoideum chromosome 2 map 126059-159710 strain AX4,
             complete sequence
          Length = 33651

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 14    tttatttaataatatttttc 33
             ||||||||||||||||||||
Sbjct: 31178 tttatttaataatatttttc 31159



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>emb|AL773505.5| Mouse DNA sequence from clone RP23-209M19 on chromosome 2, complete
              sequence
          Length = 190991

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 100    tcatgtttccttgggtatggctgt 123
              ||||||||||||||| ||||||||
Sbjct: 171817 tcatgtttccttggggatggctgt 171840



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>emb|AM233362.1| Francisella tularensis subsp. holarctica strain LVS complete genome
          Length = 1895994

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 5       aaattctggtttatttaata 24
               ||||||||||||||||||||
Sbjct: 1102207 aaattctggtttatttaata 1102226



 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 5      aaattctggtttatttaata 24
              ||||||||||||||||||||
Sbjct: 107568 aaattctggtttatttaata 107587



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>emb|AJ749949.1| Francisella tularensis subsp. tularensis SCHU S4 complete genome
          Length = 1892819

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 5       aaattctggtttatttaata 24
               ||||||||||||||||||||
Sbjct: 1790035 aaattctggtttatttaata 1790016



 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 5       aaattctggtttatttaata 24
               ||||||||||||||||||||
Sbjct: 1396691 aaattctggtttatttaata 1396672



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>emb|AL954132.14| Zebrafish DNA sequence from clone DKEY-32N7, complete sequence
          Length = 197745

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 13    gtttatttaataatattttt 32
             ||||||||||||||||||||
Sbjct: 62372 gtttatttaataatattttt 62353



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>dbj|AP004954.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT21G09, TM0131,
             complete sequence
          Length = 93645

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 21    aataatatttttccttacag 40
             ||||||||||||||||||||
Sbjct: 82220 aataatatttttccttacag 82201


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,089,211
Number of Sequences: 3902068
Number of extensions: 3089211
Number of successful extensions: 70393
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 70187
Number of HSP's gapped (non-prelim): 206
length of query: 343
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 321
effective length of database: 17,147,199,772
effective search space: 5504251126812
effective search space used: 5504251126812
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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