ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart48e06
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1CD97_MOUSE (Q9Z0M6) CD97 antigen precursor 28 7.4

>CD97_MOUSE (Q9Z0M6) CD97 antigen precursor|
          Length = 818

 Score = 28.1 bits (61), Expect = 7.4
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = -3

Query: 68 CMSFCPVSLKC*SDRSCSMFP 6
          C  +CP++ KC S+RSC   P
Sbjct: 31 CAKWCPINSKCVSNRSCVCKP 51


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.312    0.130    0.362 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,241,965
Number of Sequences: 219361
Number of extensions: 59642
Number of successful extensions: 88
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 88
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 88
length of database: 80,573,946
effective HSP length: 0
effective length of database: 80,573,946
effective search space used: 1933774704
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
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