ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart48e03 |
|---|---|
| Clone Library Name | barley_pub |
>VSPA_SOYBN (P15490) Stem 28 kDa glycoprotein precursor (Vegetative storage| protein A) Length = 254 Score = 90.5 bits (223), Expect = 2e-18 Identities = 47/89 (52%), Positives = 62/89 (69%), Gaps = 3/89 (3%) Frame = -2 Query: 476 LTGRTEDQRAITVTNLRRQGISGWMNLLLKQPGFKGS--AVTYKSGERQKLQDAGYVIVG 303 L+GRT D++A+T NL++ G W L+LK P + AV+YK+ R+KL GY IVG Sbjct: 165 LSGRTLDKQAVTEANLKKAGYHTWEKLILKDPQDPSTPNAVSYKTAAREKLIRQGYNIVG 224 Query: 302 NIGDQWSDILGAPEG-ARTFKLPDPMYYI 219 IGDQWSD+LG G +RTFKLP+P+YYI Sbjct: 225 IIGDQWSDLLGGHRGESRTFKLPNPLYYI 253
>PPA1_LYCES (P27061) Acid phosphatase 1 precursor (EC 3.1.3.2) (Apase-1(1))| Length = 255 Score = 88.6 bits (218), Expect = 8e-18 Identities = 44/87 (50%), Positives = 57/87 (65%), Gaps = 1/87 (1%) Frame = -2 Query: 476 LTGRTEDQRAITVTNLRRQGISGWMNLLLKQPGFKG-SAVTYKSGERQKLQDAGYVIVGN 300 LTGR+E R++TV NL G W L+L+ G +A TYKS R + + G+ IVGN Sbjct: 168 LTGRSERHRSVTVENLMNAGFHDWHKLILRGSDDHGKTATTYKSERRNAMVEEGFRIVGN 227 Query: 299 IGDQWSDILGAPEGARTFKLPDPMYYI 219 GDQWSD+LG+ R+FKLP+PMYYI Sbjct: 228 SGDQWSDLLGSSMSYRSFKLPNPMYYI 254
>VSPB_SOYBN (P10743) Stem 31 kDa glycoprotein precursor (Vegetative storage| protein B) Length = 254 Score = 86.7 bits (213), Expect = 3e-17 Identities = 46/88 (52%), Positives = 59/88 (67%), Gaps = 2/88 (2%) Frame = -2 Query: 476 LTGRTEDQRAITVTNLRRQGISGWMNLLLKQPGF-KGSAVTYKSGERQKLQDAGYVIVGN 300 L+GR D+ A+T NL++ G W L+LK P +A++YKS R+ L GY IVG Sbjct: 166 LSGRYLDKMAVTEANLKKAGFHTWEQLILKDPHLITPNALSYKSAMRENLLRQGYRIVGI 225 Query: 299 IGDQWSDILGAPEG-ARTFKLPDPMYYI 219 IGDQWSD+LG G +RTFKLP+PMYYI Sbjct: 226 IGDQWSDLLGDHRGESRTFKLPNPMYYI 253
>S25K_SOYBN (P10742) Stem 31 kDa glycoprotein precursor (Vegetative storage| protein VSP25) (Fragment) Length = 291 Score = 82.8 bits (203), Expect = 4e-16 Identities = 44/85 (51%), Positives = 58/85 (68%), Gaps = 3/85 (3%) Frame = -2 Query: 476 LTGRTEDQRAITVTNLRRQGISGWMNLLLKQPGFKGS--AVTYKSGERQKLQDAGYVIVG 303 L+GRT D++A+T NL++ G W L+LK P + AV+YK+ R+KL GY IVG Sbjct: 162 LSGRTLDKQAVTEANLKKAGYHTWEKLILKDPQDPSTPNAVSYKTAAREKLIRQGYNIVG 221 Query: 302 NIGDQWSDILGAPEG-ARTFKLPDP 231 IGDQWSD+LG G +RTFKLP+P Sbjct: 222 IIGDQWSDLLGGHRGESRTFKLPNP 246
>VSP1_ARATH (O49195) Vegetative storage protein 1 precursor| Length = 270 Score = 78.6 bits (192), Expect = 8e-15 Identities = 39/86 (45%), Positives = 55/86 (63%) Frame = -2 Query: 476 LTGRTEDQRAITVTNLRRQGISGWMNLLLKQPGFKGSAVTYKSGERQKLQDAGYVIVGNI 297 ++ R + IT+ NL+ G++ W +L+LK G K + V YKS R L GY IVGNI Sbjct: 184 ISDRWKKLSEITIENLKAVGVTKWKHLILKPNGSKLTQVVYKSKVRNSLVKKGYNIVGNI 243 Query: 296 GDQWSDILGAPEGARTFKLPDPMYYI 219 GDQW+D++ G R FKLP+P+YY+ Sbjct: 244 GDQWADLVEDTPG-RVFKLPNPLYYV 268
>VSP2_ARATH (O82122) Vegetative storage protein 2 precursor| Length = 265 Score = 74.7 bits (182), Expect = 1e-13 Identities = 38/86 (44%), Positives = 54/86 (62%) Frame = -2 Query: 476 LTGRTEDQRAITVTNLRRQGISGWMNLLLKQPGFKGSAVTYKSGERQKLQDAGYVIVGNI 297 L+ R + + +T+ NL G++ W +L+LK G V YKS R+ L GY IVGNI Sbjct: 179 LSDRWKLWKNVTLDNLEAAGVTYWKHLILKPNGSNLRQVVYKSKVRKSLVKKGYNIVGNI 238 Query: 296 GDQWSDILGAPEGARTFKLPDPMYYI 219 GDQW+D++ G R FKLP+P+YY+ Sbjct: 239 GDQWADLVEDTPG-RVFKLPNPLYYV 263
>DLDH_SHIFL (P0A9P3) Dihydrolipoyl dehydrogenase (EC 1.8.1.4) (E3 component of| pyruvate and 2-oxoglutarate dehydrogenases complexes) (Dihydrolipoamide dehydrogenase) (Glycine cleavage system L protein) Length = 473 Score = 31.6 bits (70), Expect = 1.1 Identities = 13/34 (38%), Positives = 22/34 (64%) Frame = +3 Query: 162 ELIREINGSMPGRARGGLADVVHGVGQLEGAGTL 263 ++I ++ G + G A+G VV+G+G+ GA TL Sbjct: 91 KVINQLTGGLAGMAKGRKVKVVNGLGKFTGANTL 124
>DLDH_ECOLI (P0A9P0) Dihydrolipoyl dehydrogenase (EC 1.8.1.4) (E3 component of| pyruvate and 2-oxoglutarate dehydrogenases complexes) (Dihydrolipoamide dehydrogenase) (Glycine cleavage system L protein) Length = 473 Score = 31.6 bits (70), Expect = 1.1 Identities = 13/34 (38%), Positives = 22/34 (64%) Frame = +3 Query: 162 ELIREINGSMPGRARGGLADVVHGVGQLEGAGTL 263 ++I ++ G + G A+G VV+G+G+ GA TL Sbjct: 91 KVINQLTGGLAGMAKGRKVKVVNGLGKFTGANTL 124
>DLDH_ECOL6 (P0A9P1) Dihydrolipoyl dehydrogenase (EC 1.8.1.4) (E3 component of| pyruvate and 2-oxoglutarate dehydrogenases complexes) (Dihydrolipoamide dehydrogenase) (Glycine cleavage system L protein) Length = 473 Score = 31.6 bits (70), Expect = 1.1 Identities = 13/34 (38%), Positives = 22/34 (64%) Frame = +3 Query: 162 ELIREINGSMPGRARGGLADVVHGVGQLEGAGTL 263 ++I ++ G + G A+G VV+G+G+ GA TL Sbjct: 91 KVINQLTGGLAGMAKGRKVKVVNGLGKFTGANTL 124
>DLDH_ECO57 (P0A9P2) Dihydrolipoyl dehydrogenase (EC 1.8.1.4) (E3 component of| pyruvate and 2-oxoglutarate dehydrogenases complexes) (Dihydrolipoamide dehydrogenase) (Glycine cleavage system L protein) Length = 473 Score = 31.6 bits (70), Expect = 1.1 Identities = 13/34 (38%), Positives = 22/34 (64%) Frame = +3 Query: 162 ELIREINGSMPGRARGGLADVVHGVGQLEGAGTL 263 ++I ++ G + G A+G VV+G+G+ GA TL Sbjct: 91 KVINQLTGGLAGMAKGRKVKVVNGLGKFTGANTL 124
>AAD6_YEAST (P43547) Putative aryl-alcohol dehydrogenase AAD6 (EC 1.1.1.-)| Length = 212 Score = 30.8 bits (68), Expect = 1.9 Identities = 13/26 (50%), Positives = 17/26 (65%) Frame = -2 Query: 302 NIGDQWSDILGAPEGARTFKLPDPMY 225 +IGD WS+ILG+ R F+L D Y Sbjct: 38 SIGDAWSEILGSMSKERAFELLDAFY 63
>PROL4_HUMAN (Q16378) Proline-rich protein 4 precursor (Lacrimal proline-rich| protein) (Nasopharyngeal carcinoma-associated proline-rich protein 4) Length = 134 Score = 30.4 bits (67), Expect = 2.5 Identities = 10/12 (83%), Positives = 10/12 (83%) Frame = -1 Query: 456 PEGHHRHQPPPP 421 P GHHRH PPPP Sbjct: 76 PGGHHRHPPPPP 87
>SRRM1_HUMAN (Q8IYB3) Serine/arginine repetitive matrix protein 1| (Ser/Arg-related nuclear matrix protein) (SR-related nuclear matrix protein of 160 kDa) (SRm160) Length = 904 Score = 30.0 bits (66), Expect = 3.2 Identities = 20/52 (38%), Positives = 21/52 (40%) Frame = -3 Query: 475 SPAGLRTRGPSPSPTSAARGSLGG*TSC*SNPGSRALR*PTSPARGRSCRTP 320 SP G R R PSP PT R P R R PT P R R+ P Sbjct: 541 SPRGRRRRSPSPPPTRRRRSPSPA-------PPPRRRRTPTPPPRRRTPSPP 585
>SRRM1_CHICK (Q5ZMJ9) Serine/arginine repetitive matrix protein 1| Length = 888 Score = 30.0 bits (66), Expect = 3.2 Identities = 18/48 (37%), Positives = 24/48 (50%) Frame = -3 Query: 475 SPAGLRTRGPSPSPTSAARGSLGG*TSC*SNPGSRALR*PTSPARGRS 332 +P +T+ +PSP SA R S S P + + P SPAR RS Sbjct: 720 TPEPKKTKASTPSPRSARRVSSSRSASGSPEPAPKKHQGPPSPARSRS 767
>YGFT_ECOLI (Q46820) Hypothetical protein ygfT| Length = 639 Score = 30.0 bits (66), Expect = 3.2 Identities = 22/54 (40%), Positives = 27/54 (50%), Gaps = 3/54 (5%) Frame = +3 Query: 294 ADVTDDDIPGVLQLLPLAGLVGHRRALEPGLLQQEVHPPRDPLAAEV---GDGD 446 AD+ +D PGV+Q LP L H R L GL + E +P D V G GD Sbjct: 411 ADLPHEDAPGVIQALPF--LTAHTRQL-MGLPESEEYPLTDVEGKRVVVLGGGD 461
>FLGH_BRUSU (Q8FXC2) Flagellar L-ring protein precursor (Basal body L-ring| protein) Length = 238 Score = 30.0 bits (66), Expect = 3.2 Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 3/48 (6%) Frame = +3 Query: 186 SMPGRARGGLADV---VHGVGQLEGAGTLWRAEDVAPLVADVTDDDIP 320 S+ G A GG D H + +G GT+ R+ED+ +A + D +P Sbjct: 116 SITGAAAGGDMDASINTHSDSKSKGKGTIERSEDIRLQIAAIVTDTLP 163
>FLGH_BRUME (Q8YB19) Flagellar L-ring protein precursor (Basal body L-ring| protein) Length = 238 Score = 30.0 bits (66), Expect = 3.2 Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 3/48 (6%) Frame = +3 Query: 186 SMPGRARGGLADV---VHGVGQLEGAGTLWRAEDVAPLVADVTDDDIP 320 S+ G A GG D H + +G GT+ R+ED+ +A + D +P Sbjct: 116 SITGAAAGGDMDASVNTHSDSKSKGKGTIERSEDIRLQIAAIVTDTLP 163
>FLGH_BRUAB (Q579T6) Flagellar L-ring protein precursor (Basal body L-ring| protein) Length = 238 Score = 30.0 bits (66), Expect = 3.2 Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 3/48 (6%) Frame = +3 Query: 186 SMPGRARGGLADV---VHGVGQLEGAGTLWRAEDVAPLVADVTDDDIP 320 S+ G A GG D H + +G GT+ R+ED+ +A + D +P Sbjct: 116 SITGAAAGGDMDASVNTHSDSKSKGKGTIERSEDIRLQIAAIVTDTLP 163
>VAT1_HUMAN (Q99536) Synaptic vesicle membrane protein VAT-1 homolog (EC| 1.-.-.-) Length = 393 Score = 29.6 bits (65), Expect = 4.2 Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 1/71 (1%) Frame = -2 Query: 431 LRRQGISGWMNLLLKQPGFKGSAVTYKSGERQKLQDAG-YVIVGNIGDQWSDILGAPEGA 255 + RQG+ + L PG +G+ V GE + AG V+V N W + + P Sbjct: 94 MARQGLYDRLPPLPVTPGMEGAGVVIAVGEGVSDRKAGDRVMVLNRSGMWQEEVTVP-SV 152 Query: 254 RTFKLPDPMYY 222 +TF +P+ M + Sbjct: 153 QTFLIPEAMTF 163
>SFPQ_HUMAN (P23246) Splicing factor, proline- and glutamine-rich| (Polypyrimidine tract-binding protein-associated splicing factor) (PTB-associated splicing factor) (PSF) (DNA-binding p52/p100 complex, 100 kDa subunit) (100-kDa DNA-pairing protein) (hPOMp Length = 707 Score = 29.6 bits (65), Expect = 4.2 Identities = 10/19 (52%), Positives = 13/19 (68%) Frame = -1 Query: 477 PHRPD*GPEGHHRHQPPPP 421 PH+P P+ H + QPPPP Sbjct: 84 PHQPPPHPQPHQQQQPPPP 102
>HRG_RABIT (Q28640) Histidine-rich glycoprotein precursor| (Histidine-proline-rich glycoprotein) (HPRG) (Fragment) Length = 526 Score = 29.3 bits (64), Expect = 5.5 Identities = 12/20 (60%), Positives = 12/20 (60%) Frame = -1 Query: 477 PHRPD*GPEGHHRHQPPPPG 418 PH P P GHH H PPP G Sbjct: 335 PHGPP--PHGHHPHGPPPHG 352 Score = 29.3 bits (64), Expect = 5.5 Identities = 12/19 (63%), Positives = 12/19 (63%) Frame = -1 Query: 474 HRPD*GPEGHHRHQPPPPG 418 HRP P GHH H PPP G Sbjct: 326 HRPP--PHGHHPHGPPPHG 342
>FABG6_BRANA (P27582) 3-oxoacyl-[acyl-carrier-protein] reductase (EC 1.1.1.100)| (3-ketoacyl-acyl carrier protein reductase) (Fragments) Length = 201 Score = 28.9 bits (63), Expect = 7.2 Identities = 19/55 (34%), Positives = 29/55 (52%) Frame = -2 Query: 425 RQGISGWMNLLLKQPGFKGSAVTYKSGERQKLQDAGYVIVGNIGDQWSDILGAPE 261 R+G S +N+ + PGF S +T K GE + + G + +G G Q D+ G E Sbjct: 124 REGASRNINVNVVCPGFIASEMTAKLGEDMEKKILGTIPLGRYG-QPEDVAGLVE 177
>NLGN1_RAT (Q62765) Neuroligin-1 precursor (Neuroligin I)| Length = 843 Score = 28.9 bits (63), Expect = 7.2 Identities = 13/31 (41%), Positives = 16/31 (51%) Frame = -1 Query: 456 PEGHHRHQPPPPGDLWVDEPLAEATRVQGLC 364 P G HR QPP P W D + AT+ +C Sbjct: 89 PTGEHRFQPPEPPSPWSD--IRNATQFAPVC 117
>NLGN1_MOUSE (Q99K10) Neuroligin-1 precursor| Length = 843 Score = 28.9 bits (63), Expect = 7.2 Identities = 13/31 (41%), Positives = 16/31 (51%) Frame = -1 Query: 456 PEGHHRHQPPPPGDLWVDEPLAEATRVQGLC 364 P G HR QPP P W D + AT+ +C Sbjct: 89 PTGEHRFQPPEPPSPWSD--IRNATQFAPVC 117
>LEU3_SCHPO (P18869) 3-isopropylmalate dehydrogenase (EC 1.1.1.85) (Beta-IPM| dehydrogenase) (IMDH) (3-IPM-DH) Length = 371 Score = 28.9 bits (63), Expect = 7.2 Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 3/65 (4%) Frame = +3 Query: 288 LVADVTDDD---IPGVLQLLPLAGLVGHRRALEPGLLQQEVHPPRDPLAAEVGDGDGPLV 458 L D+ D+ IPG L LLP A L G G +++VH +P+ D G + Sbjct: 246 LFGDIISDEASVIPGSLGLLPSASLSG-----VVGKSEEKVHCLVEPIHGSAPDIAGKGI 300 Query: 459 LSPAG 473 ++P G Sbjct: 301 VNPVG 305
>PRS23_HUMAN (O95084) Serine protease 23 precursor (EC 3.4.21.-) (Putative| secreted protein ZSIG13) Length = 383 Score = 28.9 bits (63), Expect = 7.2 Identities = 17/55 (30%), Positives = 26/55 (47%) Frame = -2 Query: 386 QPGFKGSAVTYKSGERQKLQDAGYVIVGNIGDQWSDILGAPEGARTFKLPDPMYY 222 QPG GS V + +RQ+ + +I G QW D+ G+P+ P+ Y Sbjct: 312 QPGASGSGVYVRMWKRQQQKWERKIIGIFSGHQWVDMNGSPQDFNVAVRITPLKY 366
>DLDH1_BACST (P11959) Dihydrolipoyl dehydrogenase (EC 1.8.1.4) (E3 component of| pyruvate complex) (Dihydrolipoamide dehydrogenase) Length = 470 Score = 28.9 bits (63), Expect = 7.2 Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 2/59 (3%) Frame = -2 Query: 476 LTGRTEDQRAITVTNLRRQGISGWMNLLLK--QPGFKGSAVTYKSGERQKLQDAGYVIV 306 L+G + AI L+++G+ N L K + G VTY++ K DA YV+V Sbjct: 212 LSGFEKQMAAIIKKRLKKKGVEVVTNALAKGAEEREDGVTVTYEANGETKTIDADYVLV 270
>IDI2_RICFE (Q4ULD7) Isopentenyl-diphosphate delta-isomerase (EC 5.3.3.2) (IPP| isomerase) (Isopentenyl pyrophosphate isomerase) Length = 345 Score = 28.5 bits (62), Expect = 9.4 Identities = 17/75 (22%), Positives = 34/75 (45%) Frame = +3 Query: 114 NWGLII*RNMHITKSIELIREINGSMPGRARGGLADVVHGVGQLEGAGTLWRAEDVAPLV 293 NWG+ S++++RE++G +P A GGL + G + ++ Sbjct: 251 NWGI------PTLDSLKMVREVSGDIPIIASGGLKSGIDGAKAIRMGANIFGLAGQFLKA 304 Query: 294 ADVTDDDIPGVLQLL 338 AD ++ + +QL+ Sbjct: 305 ADTSESLLSEEVQLI 319
>NUOG_STRCO (Q9XAR0) NADH-quinone oxidoreductase chain G (EC 1.6.99.5) (NADH| dehydrogenase I, chain G) (NDH-1, chain G) Length = 843 Score = 28.5 bits (62), Expect = 9.4 Identities = 27/61 (44%), Positives = 28/61 (45%), Gaps = 16/61 (26%) Frame = +3 Query: 339 PLAG---LVGHRRALEPGLLQQ-------EVHPPRDPL----AAEVG--DGDGPLVLSPA 470 P AG L GHR L+ GLLQQ H R L AAE G DGD V PA Sbjct: 727 PAAGEAVLAGHRLLLDQGLLQQGDEALAGTRHAARARLSAATAAEAGVKDGDVLAVTGPA 786 Query: 471 G 473 G Sbjct: 787 G 787
>FABG3_BRANA (Q949M3) 3-oxoacyl-[acyl-carrier-protein] reductase 3, chloroplast| precursor (EC 1.1.1.100) (3-ketoacyl-acyl carrier protein reductase 3) Length = 315 Score = 28.5 bits (62), Expect = 9.4 Identities = 19/55 (34%), Positives = 29/55 (52%) Frame = -2 Query: 425 RQGISGWMNLLLKQPGFKGSAVTYKSGERQKLQDAGYVIVGNIGDQWSDILGAPE 261 R+G S +N+ + PGF S +T K GE + + G + +G G Q D+ G E Sbjct: 238 REGASRNINVNVVCPGFIASDMTAKLGEDMEKKILGTIPLGRYG-QPEDVAGLVE 291
>FABG4_BRANA (Q949M2) 3-oxoacyl-[acyl-carrier-protein] reductase 4 (EC| 1.1.1.100) (3-ketoacyl-acyl carrier protein reductase 4) (Fragment) Length = 254 Score = 28.5 bits (62), Expect = 9.4 Identities = 19/55 (34%), Positives = 29/55 (52%) Frame = -2 Query: 425 RQGISGWMNLLLKQPGFKGSAVTYKSGERQKLQDAGYVIVGNIGDQWSDILGAPE 261 R+G S +N+ + PGF S +T K GE + + G + +G G Q D+ G E Sbjct: 177 REGASRNINVNVVCPGFIASDMTAKLGEDMEKKILGTIPLGRYG-QPEDVAGLVE 230
>RL16_LISMO (Q927L4) 50S ribosomal protein L16| Length = 144 Score = 28.5 bits (62), Expect = 9.4 Identities = 15/42 (35%), Positives = 22/42 (52%) Frame = +3 Query: 141 MHITKSIELIREINGSMPGRARGGLADVVHGVGQLEGAGTLW 266 M + K ++ RE G+M GRA+GG +V G L+ W Sbjct: 1 MLVPKRVKYRREFRGNMRGRAKGG-TEVAFGEYGLQAVEASW 41
>RL16_LISMF (Q71WF3) 50S ribosomal protein L16| Length = 144 Score = 28.5 bits (62), Expect = 9.4 Identities = 15/42 (35%), Positives = 22/42 (52%) Frame = +3 Query: 141 MHITKSIELIREINGSMPGRARGGLADVVHGVGQLEGAGTLW 266 M + K ++ RE G+M GRA+GG +V G L+ W Sbjct: 1 MLVPKRVKYRREFRGNMRGRAKGG-TEVAFGEYGLQAVEASW 41
>RL16_LISIN (Q7ANU4) 50S ribosomal protein L16| Length = 144 Score = 28.5 bits (62), Expect = 9.4 Identities = 15/42 (35%), Positives = 22/42 (52%) Frame = +3 Query: 141 MHITKSIELIREINGSMPGRARGGLADVVHGVGQLEGAGTLW 266 M + K ++ RE G+M GRA+GG +V G L+ W Sbjct: 1 MLVPKRVKYRREFRGNMRGRAKGG-TEVAFGEYGLQAVEASW 41
>FABG2_BRANA (Q93X67) 3-oxoacyl-[acyl-carrier-protein] reductase 2, chloroplast| precursor (EC 1.1.1.100) (3-ketoacyl-acyl carrier protein reductase 2) Length = 328 Score = 28.5 bits (62), Expect = 9.4 Identities = 19/55 (34%), Positives = 29/55 (52%) Frame = -2 Query: 425 RQGISGWMNLLLKQPGFKGSAVTYKSGERQKLQDAGYVIVGNIGDQWSDILGAPE 261 R+G S +N+ + PGF S +T K GE + + G + +G G Q D+ G E Sbjct: 251 REGASRNINVNVVCPGFIASDMTAKLGEDMEKKILGTIPLGRYG-QPEDVAGLVE 304
>FABG1_BRANA (Q93X62) 3-oxoacyl-[acyl-carrier-protein] reductase 1, chloroplast| precursor (EC 1.1.1.100) (3-ketoacyl-acyl carrier protein reductase 1) (Beta-keto acyl-carrier protein reductase 1) Length = 320 Score = 28.5 bits (62), Expect = 9.4 Identities = 19/55 (34%), Positives = 29/55 (52%) Frame = -2 Query: 425 RQGISGWMNLLLKQPGFKGSAVTYKSGERQKLQDAGYVIVGNIGDQWSDILGAPE 261 R+G S +N+ + PGF S +T K GE + + G + +G G Q D+ G E Sbjct: 243 REGASRNINVNVVCPGFIASDMTAKLGEDMEKKILGTIPLGRYG-QPEDVAGLVE 296 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 68,960,485 Number of Sequences: 219361 Number of extensions: 1436528 Number of successful extensions: 4813 Number of sequences better than 10.0: 36 Number of HSP's better than 10.0 without gapping: 4509 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4774 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3188886965 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
