>gb|BT016572.1| Zea mays clone Contig405 mRNA sequence
          Length = 1144

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 121/147 (82%)
 Strand = Plus / Minus

                                                                       
Query: 274 catcatatgtcggctgagaggaagttatcagacaaggtaaccttctcgcccaacttgaac 333
           ||||||||||| || |  ||||||||  ||||||||| ||||||||||||   |||||| 
Sbjct: 824 catcatatgtcagcagcaaggaagttgccagacaaggaaaccttctcgccaggcttgaat 765

                                                                       
Query: 334 ggtgccaggcctctgtatgggcaggtgctgcatcggaacgcgtcgcccaacccacaactg 393
           ||||  || |||||||| || ||||| |  || ||||| || || |||||||||||||||
Sbjct: 764 ggtggaagacctctgtagggacaggttccacagcggaaggcatcacccaacccacaactg 705

                                      
Query: 394 ccacaagctgacacagggttatcgatc 420
           ||||||||||||  |||||||| ||||
Sbjct: 704 ccacaagctgactgagggttattgatc 678

>gb|AY110043.1| Zea mays CL5496_1 mRNA sequence
          Length = 1258

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 121/147 (82%)
 Strand = Plus / Minus

                                                                       
Query: 274 catcatatgtcggctgagaggaagttatcagacaaggtaaccttctcgcccaacttgaac 333
           ||||||||||| || |  ||||||||  ||||||||| ||||||||||||   |||||| 
Sbjct: 863 catcatatgtcagcagcaaggaagttgccagacaaggaaaccttctcgccaggcttgaat 804

                                                                       
Query: 334 ggtgccaggcctctgtatgggcaggtgctgcatcggaacgcgtcgcccaacccacaactg 393
           ||||  || |||||||| || ||||| |  || ||||| || || |||||||||||||||
Sbjct: 803 ggtggaagacctctgtagggacaggttccacagcggaaggcatcacccaacccacaactg 744

                                      
Query: 394 ccacaagctgacacagggttatcgatc 420
           ||||||||||||  |||||||| ||||
Sbjct: 743 ccacaagctgactgagggttattgatc 717

>ref|XM_474393.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 795

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 67/78 (85%)
 Strand = Plus / Minus

                                                                       
Query: 343 cctctgtatgggcaggtgctgcatcggaacgcgtcgcccaacccacaactgccacaagct 402
           |||||||||||||| || |  ||||| || || ||||||||||||||| |||||||||||
Sbjct: 728 cctctgtatgggcaagtaccacatcgaaatgcatcgcccaacccacaattgccacaagct 669

                             
Query: 403 gacacagggttatcgatc 420
           |||  |||||||| ||||
Sbjct: 668 gactgagggttattgatc 651

>ref|XM_474324.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 798

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 66/78 (84%)
 Strand = Plus / Minus

                                                                       
Query: 343 cctctgtatgggcaggtgctgcatcggaacgcgtcgcccaacccacaactgccacaagct 402
           |||||||||||||| || |  ||||| || || ||||||||||||||| |||||||||| 
Sbjct: 731 cctctgtatgggcaagtaccacatcgaaatgcatcgcccaacccacaattgccacaagcg 672

                             
Query: 403 gacacagggttatcgatc 420
           |||  |||||||| ||||
Sbjct: 671 gactgagggttattgatc 654

>dbj|AK102124.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033084O13, full
           insert sequence
          Length = 1379

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 66/78 (84%)
 Strand = Plus / Minus

                                                                       
Query: 343 cctctgtatgggcaggtgctgcatcggaacgcgtcgcccaacccacaactgccacaagct 402
           |||||||||||||| || |  ||||| || || ||||||||||||||| |||||||||| 
Sbjct: 810 cctctgtatgggcaagtaccacatcgaaatgcatcgcccaacccacaattgccacaagcg 751

                             
Query: 403 gacacagggttatcgatc 420
           |||  |||||||| ||||
Sbjct: 750 gactgagggttattgatc 733

>gb|AC154050.1| Drosophila melanogaster clone BACR22M24, complete sequence
          Length = 161653

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 15     cagtcaaattacatgcacgtaa 36
              ||||||||||||||||||||||
Sbjct: 120776 cagtcaaattacatgcacgtaa 120755

>gb|AC021639.5| Drosophila melanogaster, chromosome X, region 12E-12E, BAC clone
              BACR02C24, complete sequence
          Length = 234783

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 15     cagtcaaattacatgcacgtaa 36
              ||||||||||||||||||||||
Sbjct: 114262 cagtcaaattacatgcacgtaa 114283

>emb|BX072530.5| Zebrafish DNA sequence from clone DKEY-221K19, complete sequence
          Length = 167009

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 203    tacatagatatcttcctaaaga 224
              ||||||||||||||||||||||
Sbjct: 157345 tacatagatatcttcctaaaga 157324

>gb|AE003494.4| Drosophila melanogaster chromosome X, section 46 of 74 of the complete
              sequence
          Length = 310498

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 15     cagtcaaattacatgcacgtaa 36
              ||||||||||||||||||||||
Sbjct: 219441 cagtcaaattacatgcacgtaa 219420

>emb|AL606641.3|OSJN00074 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0032F06,
             complete sequence
          Length = 148023

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 63/77 (81%)
 Strand = Plus / Plus

                                                                         
Query: 313   accttctcgcccaacttgaacggtgccaggcctctgtatgggcaggtgctgcatcggaac 372
             ||||||||||||  |||||| | ||  || |||||||||||||| || |  ||||| || 
Sbjct: 62352 accttctcgcccggcttgaatgctggtagacctctgtatgggcaagtaccacatcgaaat 62411

                              
Query: 373   gcgtcgcccaacccaca 389
             || ||||||||||||||
Sbjct: 62412 gcatcgcccaacccaca 62428

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 63/77 (81%)
 Strand = Plus / Plus

                                                                            
Query: 313      accttctcgcccaacttgaacggtgccaggcctctgtatgggcaggtgctgcatcggaac 372
                ||||||||||||  |||||| | ||  || |||||||||||||| || |  ||||| || 
Sbjct: 34856239 accttctcgcccggcttgaatgctggtagacctctgtatgggcaagtaccacatcgaaat 34856298

                                 
Query: 373      gcgtcgcccaacccaca 389
                || ||||||||||||||
Sbjct: 34856299 gcatcgcccaacccaca 34856315

>emb|AL732352.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0124B04, complete
             sequence
          Length = 115564

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 63/77 (81%)
 Strand = Plus / Plus

                                                                         
Query: 313   accttctcgcccaacttgaacggtgccaggcctctgtatgggcaggtgctgcatcggaac 372
             ||||||||||||  |||||| | ||  || |||||||||||||| || |  ||||| || 
Sbjct: 35885 accttctcgcccggcttgaatgctggtagacctctgtatgggcaagtaccacatcgaaat 35944

                              
Query: 373   gcgtcgcccaacccaca 389
             || ||||||||||||||
Sbjct: 35945 gcatcgcccaacccaca 35961

>emb|AL732354.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0901F07, complete
              sequence
          Length = 110682

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 63/77 (81%)
 Strand = Plus / Plus

                                                                          
Query: 313    accttctcgcccaacttgaacggtgccaggcctctgtatgggcaggtgctgcatcggaac 372
              ||||||||||||  |||||| | ||  || |||||||||||||| || |  ||||| || 
Sbjct: 109961 accttctcgcccggcttgaatgctggtagacctctgtatgggcaagtaccacatcgaaat 110020

                               
Query: 373    gcgtcgcccaacccaca 389
              || ||||||||||||||
Sbjct: 110021 gcatcgcccaacccaca 110037

>gb|AE006877.1| Sulfolobus solfataricus P2 section 236 of 272 of the complete genome
          Length = 13959

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 346  ctgtatgggcaggtgctgca 365
            ||||||||||||||||||||
Sbjct: 9895 ctgtatgggcaggtgctgca 9876

>gb|AC002433.2| Homo sapiens BAC clone CTA-317M2 from 7, complete sequence
          Length = 139919

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 4      tggatgtttcacagtcaaat 23
              ||||||||||||||||||||
Sbjct: 124645 tggatgtttcacagtcaaat 124626

>gb|AC146510.3| Pan troglodytes BAC clone RP43-64B24 from 7, complete sequence
          Length = 153089

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 4     tggatgtttcacagtcaaat 23
             ||||||||||||||||||||
Sbjct: 94083 tggatgtttcacagtcaaat 94102

>gb|AC145920.1| Pan troglodytes BAC clone RP43-10C15 from 7, complete sequence
          Length = 188373

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 4      tggatgtttcacagtcaaat 23
              ||||||||||||||||||||
Sbjct: 179706 tggatgtttcacagtcaaat 179687

>gb|AC138229.16| Mus musculus chromosome 1, clone RP23-399N18, complete sequence
          Length = 211732

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 291   gaggaagttatcagacaagg 310
             ||||||||||||||||||||
Sbjct: 85253 gaggaagttatcagacaagg 85272


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,773,923
Number of Sequences: 3902068
Number of extensions: 2773923
Number of successful extensions: 46866
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 46822
Number of HSP's gapped (non-prelim): 44
length of query: 420
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 398
effective length of database: 17,147,199,772
effective search space: 6824585509256
effective search space used: 6824585509256
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)