>gb|AC012328.6|ATAC012328 Arabidopsis thaliana chromosome III BAC T17B22 genomic sequence,
             complete sequence
          Length = 96540

 Score = 40.1 bits (20), Expect = 0.96
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 50    actatactaaaatcaatctc 69
             ||||||||||||||||||||
Sbjct: 12936 actatactaaaatcaatctc 12955

>emb|AL049792.11|HSJ305B16 Human DNA sequence from clone RP1-305B16 on chromosome Xq25-26.2
             Contains a novel gene, a novel pseudogene and the 3' end
             of the RAP2C gene for RAP2C (member of RAS oncogene
             family), complete sequence
          Length = 109524

 Score = 40.1 bits (20), Expect = 0.96
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 60    aatcaatctcaatataactg 79
             ||||||||||||||||||||
Sbjct: 85100 aatcaatctcaatataactg 85081

>gb|AC097657.3| Homo sapiens BAC clone RP11-362J18 from 4, complete sequence
          Length = 159934

 Score = 40.1 bits (20), Expect = 0.96
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 39     atagtactactactatacta 58
              ||||||||||||||||||||
Sbjct: 143861 atagtactactactatacta 143880

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 0.96
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 40       tagtactactactatactaaaatc 63
                |||||||| |||||||||||||||
Sbjct: 35377440 tagtactattactatactaaaatc 35377417



 Score = 38.2 bits (19), Expect = 3.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                   
Query: 40       tagtactactactatacta 58
                |||||||||||||||||||
Sbjct: 11222413 tagtactactactatacta 11222395

>dbj|AP004026.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1136_C04
          Length = 103194

 Score = 40.1 bits (20), Expect = 0.96
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 40    tagtactactactatactaaaatc 63
             |||||||| |||||||||||||||
Sbjct: 37988 tagtactattactatactaaaatc 37965

>gb|AC132369.3| Mus musculus BAC clone RP23-470P10 from 1, complete sequence
          Length = 161641

 Score = 40.1 bits (20), Expect = 0.96
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 49    tactatactaaaatcaatct 68
             ||||||||||||||||||||
Sbjct: 66643 tactatactaaaatcaatct 66624

>emb|CR388042.8| Zebrafish DNA sequence from clone CH211-254C12 in linkage group 15,
              complete sequence
          Length = 158539

 Score = 38.2 bits (19), Expect = 3.8
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                         
Query: 36     aaaatagtactactactatactaaaat 62
              |||||||||||||||  ||||||||||
Sbjct: 109483 aaaatagtactactaaaatactaaaat 109509

>emb|BX470115.19| Zebrafish DNA sequence from clone CH211-234C11 in linkage group 23,
             complete sequence
          Length = 185756

 Score = 38.2 bits (19), Expect = 3.8
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                        
Query: 36    aaaatagtactactactatactaaaat 62
             |||||||||||||||  ||||||||||
Sbjct: 48824 aaaatagtactactaaaatactaaaat 48850



 Score = 38.2 bits (19), Expect = 3.8
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                        
Query: 36    aaaatagtactactactatactaaaat 62
             |||||||||||||||  ||||||||||
Sbjct: 11820 aaaatagtactactaaaatactaaaat 11794

>emb|BX927164.19| Zebrafish DNA sequence from clone DKEY-27P2 in linkage group 5,
             complete sequence
          Length = 108759

 Score = 38.2 bits (19), Expect = 3.8
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                        
Query: 36    aaaatagtactactactatactaaaat 62
             |||||||||||||||  ||||||||||
Sbjct: 83615 aaaatagtactactaaaatactaaaat 83589

>emb|BX004997.17| Zebrafish DNA sequence from clone DKEY-46E6 in linkage group 7, complete
              sequence
          Length = 200556

 Score = 38.2 bits (19), Expect = 3.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 26     caacactgggaaaatagta 44
              |||||||||||||||||||
Sbjct: 134212 caacactgggaaaatagta 134230

>emb|BX664718.7| Human DNA sequence from clone RP11-175I6 on chromosome 9 Conatins a
             pseudogene similar to part of fibroblast growth factor 7
             (keratinocyte growth factor) (FGF7), two novel
             pseudogenes, a pseudogene similar to part of G
             protein-coupled receptor 116 (GPR116), a novel gene and a
             pseudogene similar to part of meprin A, alpha (PABA
             peptide hydrolase) (MEP1A), complete sequence
          Length = 167646

 Score = 38.2 bits (19), Expect = 3.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 44    actactactatactaaaat 62
             |||||||||||||||||||
Sbjct: 43227 actactactatactaaaat 43245

>gb|AC016480.10| Homo sapiens, clone RP11-29M11, complete sequence
          Length = 97199

 Score = 38.2 bits (19), Expect = 3.8
 Identities = 28/30 (93%), Gaps = 2/30 (6%)
 Strand = Plus / Minus

                                          
Query: 49   tactatactaaaatcaatctcaatataact 78
            ||||||||||||||  ||||||||||||||
Sbjct: 7823 tactatactaaaat--atctcaatataact 7796

>emb|AL606647.3|OSJN00096 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0012E24,
             complete sequence
          Length = 127506

 Score = 38.2 bits (19), Expect = 3.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 40    tagtactactactatacta 58
             |||||||||||||||||||
Sbjct: 94003 tagtactactactatacta 93985

>emb|BX936382.9| Zebrafish DNA sequence from clone CH211-223A21 in linkage group 3,
              complete sequence
          Length = 162342

 Score = 38.2 bits (19), Expect = 3.8
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                         
Query: 36     aaaatagtactactactatactaaaat 62
              |||||||||||||||  ||||||||||
Sbjct: 138172 aaaatagtactactaaaatactaaaat 138146

>emb|BX571813.8| Zebrafish DNA sequence from clone DKEY-14O6 in linkage group 3,
             complete sequence
          Length = 233901

 Score = 38.2 bits (19), Expect = 3.8
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                        
Query: 36    aaaatagtactactactatactaaaat 62
             |||||||||||||||  ||||||||||
Sbjct: 12002 aaaatagtactactaaaatactaaaat 11976

>emb|CR790376.10| Zebrafish DNA sequence from clone DKEY-66K12 in linkage group 4,
             complete sequence
          Length = 92591

 Score = 38.2 bits (19), Expect = 3.8
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                        
Query: 36    aaaatagtactactactatactaaaat 62
             |||||||||||||||  ||||||||||
Sbjct: 38509 aaaatagtactactaaaatactaaaat 38535

>emb|BX649563.5| Human DNA sequence from clone RP11-213O5 on chromosome 9 Contains a
              pseudogene similar to part of a novel protein
              (DKFZp434A171), a pseudogene similar to part of meprin A,
              alpha (PABA peptide hydrolase) (MEP1A), a pseudogene
              similar to part of a novel transmembrane receptor protein
              and two novel pseudogenes, complete sequence
          Length = 189495

 Score = 38.2 bits (19), Expect = 3.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 44     actactactatactaaaat 62
              |||||||||||||||||||
Sbjct: 152729 actactactatactaaaat 152711

>emb|BX469933.14| Zebrafish DNA sequence from clone CH211-207E19 in linkage group 4
              Contains seven novel genes and two CpG islands, complete
              sequence
          Length = 216458

 Score = 38.2 bits (19), Expect = 3.8
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                         
Query: 36     aaaatagtactactactatactaaaat 62
              |||||||||||||||  ||||||||||
Sbjct: 139287 aaaatagtactactaaaatactaaaat 139261

>dbj|AP006716.1| Staphylococcus haemolyticus JCSC1435 DNA, complete genome
          Length = 2685015

 Score = 38.2 bits (19), Expect = 3.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 58     aaaatcaatctcaatataa 76
              |||||||||||||||||||
Sbjct: 875055 aaaatcaatctcaatataa 875037

>gb|AC112910.3| Homo sapiens 3 BAC RP11-273F12 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 115927

 Score = 38.2 bits (19), Expect = 3.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 57    taaaatcaatctcaatata 75
             |||||||||||||||||||
Sbjct: 37770 taaaatcaatctcaatata 37752

>gb|AC087174.4| Homo sapiens chromosome 11, clone RP11-640J11, complete sequence
          Length = 187218

 Score = 38.2 bits (19), Expect = 3.8
 Identities = 28/30 (93%), Gaps = 2/30 (6%)
 Strand = Plus / Minus

                                            
Query: 49     tactatactaaaatcaatctcaatataact 78
              ||||||||||||||  ||||||||||||||
Sbjct: 166061 tactatactaaaat--atctcaatataact 166034

>emb|BX276122.23| Zebrafish DNA sequence from clone CH211-232H22, complete sequence
          Length = 186714

 Score = 38.2 bits (19), Expect = 3.8
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                         
Query: 36     aaaatagtactactactatactaaaat 62
              |||||||||||||||  ||||||||||
Sbjct: 149649 aaaatagtactactaaaatactaaaat 149675

>emb|BX539341.8| Zebrafish DNA sequence from clone DKEY-3P4 in linkage group 22, complete
              sequence
          Length = 236484

 Score = 38.2 bits (19), Expect = 3.8
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                         
Query: 36     aaaatagtactactactatactaaaat 62
              |||||||||||||||  ||||||||||
Sbjct: 100636 aaaatagtactactaaaatactaaaat 100610

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 38.2 bits (19), Expect = 3.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                   
Query: 40       tagtactactactatacta 58
                |||||||||||||||||||
Sbjct: 27825331 tagtactactactatacta 27825313

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 38.2 bits (19), Expect = 3.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                   
Query: 40       tagtactactactatacta 58
                |||||||||||||||||||
Sbjct: 17999075 tagtactactactatacta 17999057

>emb|BX005336.10| Zebrafish DNA sequence from clone DKEY-85K7 in linkage group 7, complete
              sequence
          Length = 233826

 Score = 38.2 bits (19), Expect = 3.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 26     caacactgggaaaatagta 44
              |||||||||||||||||||
Sbjct: 145472 caacactgggaaaatagta 145490

>gb|AC010899.8| Homo sapiens BAC clone RP11-543K1 from 2, complete sequence
          Length = 210232

 Score = 38.2 bits (19), Expect = 3.8
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 49     tactatactaaaatcaatctcaa 71
              ||||| |||||||||||||||||
Sbjct: 105471 tactacactaaaatcaatctcaa 105493

>emb|BX548173.6| Zebrafish DNA sequence from clone DKEY-47K16 in linkage group 21,
             complete sequence
          Length = 210873

 Score = 38.2 bits (19), Expect = 3.8
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                        
Query: 36    aaaatagtactactactatactaaaat 62
             |||||||||||||||  ||||||||||
Sbjct: 50478 aaaatagtactactaaaatactaaaat 50504

>emb|BX470200.12| Zebrafish DNA sequence from clone DKEY-207M2 in linkage group 4,
            complete sequence
          Length = 172729

 Score = 38.2 bits (19), Expect = 3.8
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                       
Query: 36   aaaatagtactactactatactaaaat 62
            |||||||||||||||  ||||||||||
Sbjct: 5324 aaaatagtactactaaaatactaaaat 5350

>dbj|AP005929.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBb0071G09
          Length = 169148

 Score = 38.2 bits (19), Expect = 3.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 40    tagtactactactatacta 58
             |||||||||||||||||||
Sbjct: 65381 tagtactactactatacta 65363

>emb|BX649479.3| Zebrafish DNA sequence from clone CH211-187D1 in linkage group 4,
             complete sequence
          Length = 87409

 Score = 38.2 bits (19), Expect = 3.8
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                        
Query: 36    aaaatagtactactactatactaaaat 62
             |||||||||||||||  ||||||||||
Sbjct: 78911 aaaatagtactactaaaatactaaaat 78937

>emb|BX324212.8| Zebrafish DNA sequence from clone CH211-209N20 in linkage group 4,
              complete sequence
          Length = 212125

 Score = 38.2 bits (19), Expect = 3.8
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                         
Query: 36     aaaatagtactactactatactaaaat 62
              |||||||||||||||  ||||||||||
Sbjct: 185224 aaaatagtactactaaaatactaaaat 185250

>dbj|AP005414.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0073G17
          Length = 162391

 Score = 38.2 bits (19), Expect = 3.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 40    tagtactactactatacta 58
             |||||||||||||||||||
Sbjct: 25228 tagtactactactatacta 25210

>emb|BX928743.21| Zebrafish DNA sequence from clone DKEY-78K22 in linkage group 3, complete
              sequence
          Length = 177021

 Score = 38.2 bits (19), Expect = 3.8
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                         
Query: 36     aaaatagtactactactatactaaaat 62
              |||||||||||||||  ||||||||||
Sbjct: 152263 aaaatagtactactaaaatactaaaat 152289

>emb|BX088717.12| Human DNA sequence from clone RP11-624E13 on chromosome 9, complete
              sequence
          Length = 186615

 Score = 38.2 bits (19), Expect = 3.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 44     actactactatactaaaat 62
              |||||||||||||||||||
Sbjct: 179099 actactactatactaaaat 179117


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 925,269
Number of Sequences: 3902068
Number of extensions: 925269
Number of successful extensions: 69941
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 69725
Number of HSP's gapped (non-prelim): 218
length of query: 89
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 68
effective length of database: 17,151,101,840
effective search space: 1166274925120
effective search space used: 1166274925120
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)