Clone Name | rbart48d04 |
---|---|
Clone Library Name | barley_pub |
>PA21B_HORSE (P00594) Phospholipase A2 precursor (EC 3.1.1.4)| (Phosphatidylcholine 2-acylhydrolase) (Group IB phospholipase A2) [Contains: Phospholipase A2 isoform 2] (Fragment) Length = 132 Score = 30.8 bits (68), Expect = 2.0 Identities = 15/47 (31%), Positives = 22/47 (46%) Frame = -2 Query: 252 SPCLESYRFASDSCVLPCSEN*NKCFACW*F*MCEVCLCVRGPVLCF 112 +P ESY+F+ + CS+ N C A +C C R +CF Sbjct: 74 NPYTESYKFSCSGTEVTCSDKNNACEAF-------ICNCDRNAAICF 113
>Y2082_MYCTU (Q10690) Hypothetical protein Rv2082| Length = 721 Score = 30.0 bits (66), Expect = 3.4 Identities = 14/49 (28%), Positives = 21/49 (42%) Frame = +3 Query: 297 TPASDPPDTLGPLGRISTCSCTAGAGADLGASLTPVRPQPATRSTRPKN 443 TP + PP GP+ + + AG L + + PAT +P N Sbjct: 437 TPPATPPTPTGPISGAAVTPSSPAAGGSLMSPVVNKSTAPATTQAQPSN 485
>INP5E_HUMAN (Q9NRR6) 72 kDa inositol polyphosphate 5-phosphatase (EC 3.1.3.36)| (Phosphatidylinositol-4,5-bisphosphate 5-phosphatase) (Phosphatidylinositol polyphosphate 5-phosphatase type IV) Length = 644 Score = 28.9 bits (63), Expect = 7.6 Identities = 18/51 (35%), Positives = 22/51 (43%), Gaps = 1/51 (1%) Frame = +3 Query: 303 ASDPPDTLGPLGRISTCSCTAG-AGADLGASLTPVRPQPATRSTRPKNLSL 452 A PPD G CS A +G D A P+ P+P R + LSL Sbjct: 36 AGSPPDAPGSESPALACSTPATPSGEDPPARAAPIAPRPPARPRLERALSL 86
>MYH14_HUMAN (Q7Z406) Myosin-14 (Myosin heavy chain, nonmuscle IIc) (Nonmuscle| myosin heavy chain IIc) (NMHC II-C) Length = 1995 Score = 28.9 bits (63), Expect = 7.6 Identities = 12/36 (33%), Positives = 17/36 (47%) Frame = -1 Query: 400 GVKEAPKSAPAPAVHEHVEIRPRGPNVSGGSEAGVN 293 G K P+ P P + PRGP+ GG +G + Sbjct: 10 GRKAPPRPGPVPEAAQPFLFTPRGPSAGGGPGSGTS 45
>ZSWM2_MOUSE (Q9D9X6) Zinc finger SWIM domain-containing protein 2| Length = 631 Score = 28.9 bits (63), Expect = 7.6 Identities = 15/60 (25%), Positives = 28/60 (46%), Gaps = 1/60 (1%) Frame = -2 Query: 246 CLESYRFASDSCVLPCSEN*N-KCFACW*F*MCEVCLCVRGPVLCFQVFKKILWSCLVTE 70 CL+S+ F + +LPC+ + KC W C C P+ ++ ++W + T+ Sbjct: 347 CLKSFSFGQYTRLLPCTHKFHRKCIDNWLLHKCNSC-----PIDRQVIYNPLIWKGIATD 401
>GLYG_RABIT (P13280) Glycogenin-1 (EC 2.4.1.186)| Length = 332 Score = 28.5 bits (62), Expect = 9.9 Identities = 9/23 (39%), Positives = 14/23 (60%) Frame = -2 Query: 279 WYSLFTTSTSPCLESYRFASDSC 211 W+ +FTTS P L+ + D+C Sbjct: 248 WWDIFTTSVVPLLQQFGLVQDTC 270 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 61,610,030 Number of Sequences: 219361 Number of extensions: 1119477 Number of successful extensions: 3387 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 3281 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3386 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3362826254 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)