ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart48d04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|AL606649.4|OSJN00094 Oryza sativa genomic DNA, chromosome 4,... 90 8e-15
2dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 90 8e-15
3dbj|AK121265.1| Oryza sativa (japonica cultivar-group) cDNA clon... 90 8e-15
4gb|AY106843.1| Zea mays PCO102445 mRNA sequence 58 3e-05
5gb|AY107986.1| Zea mays PCO107237 mRNA sequence 56 1e-04
6dbj|AK063036.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 0.002
7gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence 44 0.42
8emb|AJ564474.1|HMO564474 Halococcus morrhuae partial gggp syntha... 44 0.42
9gb|AC084459.1|AC084459 Caenorhabditis briggsae cosmid CB032J19, ... 44 0.42
10gb|U04727.1|PPU04727 Porphyra purpurea Avonport clone 23b6 sporo... 44 0.42
11emb|AL513264.8| Human DNA sequence from clone RP11-480H3 on chro... 42 1.7
12gb|AC152162.9| Mus musculus chromosome 19, clone RP23-457B18, co... 42 1.7
13emb|AL939106.1|SCO939106 Streptomyces coelicolor A3(2) complete ... 42 1.7
14gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome 42 1.7
15gb|AE005106.1| Halobacterium sp. NRC-1 section 137 of 170 of the... 42 1.7
16gb|AC102755.18| Mus musculus chromosome 19, clone RP24-143E6, co... 42 1.7
17emb|BX000481.5| Zebrafish DNA sequence from clone CH211-13A4 in ... 42 1.7
18emb|AL954699.4| Zebrafish DNA sequence from clone CH211-264H3 in... 42 1.7
19emb|AL845524.5| Mouse DNA sequence from clone RP23-248D22 on chr... 42 1.7
20gb|AC111134.10| Mus musculus chromosome 3, clone RP23-349J3, com... 40 6.6
21ref|XM_636824.1| Dictyostelium discoideum hypothetical protein (... 40 6.6
22gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome 40 6.6
23ref|XM_956745.1| Neurospora crassa OR74A hypothetical protein (N... 40 6.6
24ref|XM_327302.1| Neurospora crassa OR74A hypothetical protein (N... 40 6.6
25gb|AF117829.3| Homo sapiens chromosome 8 multiple clones map q21... 40 6.6
26emb|CR931997.1| Corynebacterium jeikeium K411 complete genome 40 6.6
27gb|AC116575.4| Mus musculus BAC clone RP23-263I24 from 9, comple... 40 6.6
28gb|AC102044.7| Mus musculus chromosome 9, clone RP23-303N8, comp... 40 6.6
29gb|AC141111.25| Medicago truncatula clone mth2-20c17, complete s... 40 6.6
30gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome 40 6.6
31emb|BX842574.1| Mycobacterium tuberculosis H37Rv complete genome... 40 6.6
32emb|BX248336.1| Mycobacterium bovis subsp. bovis AF2122/97 compl... 40 6.6
33gb|AC114930.2| Homo sapiens chromosome 5 clone CTD-2017A19, comp... 40 6.6
34dbj|AK092564.1| Homo sapiens cDNA FLJ35245 fis, clone PROST20028... 40 6.6
35gb|AC107223.5| Homo sapiens BAC clone RP11-1289C17 from 4, compl... 40 6.6
36gb|AC010342.5|AC010342 Homo sapiens chromosome 5 clone CTD-2015B... 40 6.6
37gb|AC108125.4| Homo sapiens chromosome 16 clone RP11-58C22, comp... 40 6.6
38gb|AC074178.1|AC074178 Homo sapiens PAC clone RP5-1098O20 from 8... 40 6.6
39gb|AF069291.1|AF069291 Homo sapiens BAC clone 255A7 from 8q21 co... 40 6.6
40gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 40 6.6 
>emb|AL606649.4|OSJN00094 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0003B01,
             complete sequence
          Length = 153643

 Score = 89.7 bits (45), Expect = 8e-15
 Identities = 66/73 (90%)
 Strand = Plus / Minus

                                                                         
Query: 404   gcggccgcagccggcgacgcggtcgacgaggccgaaaaacctatccttgagctgggtggc 463
             ||||||||||||||||||||| ||||||||||||| |||||| ||||||||||| |  ||
Sbjct: 29326 gcggccgcagccggcgacgcgctcgacgaggccgagaaacctgtccttgagctgagcagc 29267

                          
Query: 464   gaagttggccatg 476
             ||| |||||||||
Sbjct: 29266 gaacttggccatg 29254



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 41/46 (89%)
 Strand = Plus / Minus

                                                           
Query: 412   agccggcgacgcggtcgacgaggccgaaaaacctatccttgagctg 457
             |||||| |||||| |||||||||||||| ||| | |||||||||||
Sbjct: 31538 agccggtgacgcgctcgacgaggccgaagaacatgtccttgagctg 31493
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 89.7 bits (45), Expect = 8e-15
 Identities = 66/73 (90%)
 Strand = Plus / Minus

                                                                            
Query: 404      gcggccgcagccggcgacgcggtcgacgaggccgaaaaacctatccttgagctgggtggc 463
                ||||||||||||||||||||| ||||||||||||| |||||| ||||||||||| |  ||
Sbjct: 32510592 gcggccgcagccggcgacgcgctcgacgaggccgagaaacctgtccttgagctgagcagc 32510533

                             
Query: 464      gaagttggccatg 476
                ||| |||||||||
Sbjct: 32510532 gaacttggccatg 32510520



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 41/46 (89%)
 Strand = Plus / Minus

                                                              
Query: 412      agccggcgacgcggtcgacgaggccgaaaaacctatccttgagctg 457
                |||||| |||||| |||||||||||||| ||| | |||||||||||
Sbjct: 32512804 agccggtgacgcgctcgacgaggccgaagaacatgtccttgagctg 32512759
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>dbj|AK121265.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023105D11, full
           insert sequence
          Length = 596

 Score = 89.7 bits (45), Expect = 8e-15
 Identities = 66/73 (90%)
 Strand = Plus / Minus

                                                                       
Query: 404 gcggccgcagccggcgacgcggtcgacgaggccgaaaaacctatccttgagctgggtggc 463
           ||||||||||||||||||||| ||||||||||||| |||||| ||||||||||| |  ||
Sbjct: 191 gcggccgcagccggcgacgcgctcgacgaggccgagaaacctgtccttgagctgagcagc 132

                        
Query: 464 gaagttggccatg 476
           ||| |||||||||
Sbjct: 131 gaacttggccatg 119
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>gb|AY106843.1| Zea mays PCO102445 mRNA sequence
          Length = 808

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 65/77 (84%)
 Strand = Plus / Minus

                                                                       
Query: 399 ccggtgcggccgcagccggcgacgcggtcgacgaggccgaaaaacctatccttgagctgg 458
           |||| |||||||| ||||||||| ||||||||||||||||  ||| | ||||| | ||| 
Sbjct: 430 ccggcgcggccgcggccggcgacacggtcgacgaggccgaggaacttgtccttaatctga 371

                            
Query: 459 gtggcgaagttggccat 475
           |  ||||||||||||||
Sbjct: 370 gcagcgaagttggccat 354
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>gb|AY107986.1| Zea mays PCO107237 mRNA sequence
          Length = 493

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                           
Query: 410 gcagccggcgacgcggtcgacgaggccgaaaaacctatccttgagctg 457
           |||||||| ||||||||||||||||||||  ||| | |||||||||||
Sbjct: 175 gcagccggtgacgcggtcgacgaggccgaggaacatgtccttgagctg 128
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>dbj|AK063036.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-110-C11, full
           insert sequence
          Length = 832

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 41/46 (89%)
 Strand = Plus / Minus

                                                         
Query: 412 agccggcgacgcggtcgacgaggccgaaaaacctatccttgagctg 457
           |||||| |||||| |||||||||||||| ||| | |||||||||||
Sbjct: 213 agccggtgacgcgctcgacgaggccgaagaacatgtccttgagctg 168
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>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence
          Length = 3694126

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 417     gcgacgcggtcgacgaggccga 438
               ||||||||||||||||||||||
Sbjct: 3379422 gcgacgcggtcgacgaggccga 3379443
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>emb|AJ564474.1|HMO564474 Halococcus morrhuae partial gggp synthase gene for putative
           geranylgeranylglyceryl phosphate synthase
          Length = 447

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 406 ggccgcagccggcgacgcggtcgacgaggc 435
           |||||| |||||||||||| ||||||||||
Sbjct: 405 ggccgccgccggcgacgcgctcgacgaggc 434
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>gb|AC084459.1|AC084459 Caenorhabditis briggsae cosmid CB032J19, complete sequence
          Length = 92783

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                           
Query: 181   tttgtttcaattttcagaacaagggagaac 210
             |||||||||||||||| || ||||||||||
Sbjct: 44366 tttgtttcaattttcaaaaaaagggagaac 44395
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>gb|U04727.1|PPU04727 Porphyra purpurea Avonport clone 23b6 sporophyte-specific mRNA,
           partial sequence
          Length = 1008

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 415 cggcgacgcggtcgacgaggcc 436
           ||||||||||||||||||||||
Sbjct: 510 cggcgacgcggtcgacgaggcc 489
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>emb|AL513264.8| Human DNA sequence from clone RP11-480H3 on chromosome 6, complete
             sequence
          Length = 90015

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 61    actcaattcttcagttacaaggcat 85
             ||||||||||||||||| |||||||
Sbjct: 62789 actcaattcttcagttaaaaggcat 62765
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>gb|AC152162.9| Mus musculus chromosome 19, clone RP23-457B18, complete sequence
          Length = 182365

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 439   aaaacctatccttgagctggg 459
             |||||||||||||||||||||
Sbjct: 89301 aaaacctatccttgagctggg 89281
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>emb|AL939106.1|SCO939106 Streptomyces coelicolor A3(2) complete genome; segment 3/29
          Length = 314100

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 415    cggcgacgcggtcgacgaggccgaa 439
              |||||||||||||||||||| ||||
Sbjct: 263962 cggcgacgcggtcgacgaggacgaa 263986
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>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome
          Length = 7074893

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 398     cccggtgcggccgcagccggc 418
               |||||||||||||||||||||
Sbjct: 5748920 cccggtgcggccgcagccggc 5748940



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 447     tccttgagctgggtggcgaag 467
               |||||||||||||||||||||
Sbjct: 4592856 tccttgagctgggtggcgaag 4592836
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>gb|AE005106.1| Halobacterium sp. NRC-1 section 137 of 170 of the complete genome
          Length = 13219

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 415   cggcgacgcggtcgacgaggc 435
             |||||||||||||||||||||
Sbjct: 11835 cggcgacgcggtcgacgaggc 11815
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>gb|AC102755.18| Mus musculus chromosome 19, clone RP24-143E6, complete sequence
          Length = 153856

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 439    aaaacctatccttgagctggg 459
              |||||||||||||||||||||
Sbjct: 143200 aaaacctatccttgagctggg 143180
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>emb|BX000481.5| Zebrafish DNA sequence from clone CH211-13A4 in linkage group 5,
             complete sequence
          Length = 163926

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 183   tgtttcaattttcagaacaag 203
             |||||||||||||||||||||
Sbjct: 82572 tgtttcaattttcagaacaag 82592
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>emb|AL954699.4| Zebrafish DNA sequence from clone CH211-264H3 in linkage group 5,
             complete sequence
          Length = 143013

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 183   tgtttcaattttcagaacaag 203
             |||||||||||||||||||||
Sbjct: 84040 tgtttcaattttcagaacaag 84060
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>emb|AL845524.5| Mouse DNA sequence from clone RP23-248D22 on chromosome 2, complete
              sequence
          Length = 174188

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 200    caagggagaacacatgaatct 220
              |||||||||||||||||||||
Sbjct: 142234 caagggagaacacatgaatct 142214
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>gb|AC111134.10| Mus musculus chromosome 3, clone RP23-349J3, complete sequence
          Length = 223171

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 129    cacgcacgcacaagcacact 148
              ||||||||||||||||||||
Sbjct: 142934 cacgcacgcacaagcacact 142953
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>ref|XM_636824.1| Dictyostelium discoideum hypothetical protein (DDB0215303), partial
           mRNA
          Length = 2997

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 49  aatcatcatgaaactcaatt 68
           ||||||||||||||||||||
Sbjct: 898 aatcatcatgaaactcaatt 917
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>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome
          Length = 4403837

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 418    cgacgcggtcgacgaggccg 437
              ||||||||||||||||||||
Sbjct: 768123 cgacgcggtcgacgaggccg 768142
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>ref|XM_956745.1| Neurospora crassa OR74A hypothetical protein (NCU07017.1) partial
           mRNA
          Length = 1038

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 357 tgcactgccggcgccggcgc 376
           ||||||||||||||||||||
Sbjct: 676 tgcactgccggcgccggcgc 695
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>ref|XM_327302.1| Neurospora crassa OR74A hypothetical protein (NCU07017.1) partial
           mRNA
          Length = 1038

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 357 tgcactgccggcgccggcgc 376
           ||||||||||||||||||||
Sbjct: 676 tgcactgccggcgccggcgc 695
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>gb|AF117829.3| Homo sapiens chromosome 8 multiple clones map q21.3, complete sequence
          Length = 320187

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 183    tgtttcaattttcagaacaa 202
              ||||||||||||||||||||
Sbjct: 266603 tgtttcaattttcagaacaa 266622
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>emb|CR931997.1| Corynebacterium jeikeium K411 complete genome
          Length = 2462499

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 418    cgacgcggtcgacgaggccg 437
              ||||||||||||||||||||
Sbjct: 625146 cgacgcggtcgacgaggccg 625165
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>gb|AC116575.4| Mus musculus BAC clone RP23-263I24 from 9, complete sequence
          Length = 208678

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 186  ttcaattttcagaacaagggagaa 209
            ||||||||||||| ||||||||||
Sbjct: 3078 ttcaattttcagagcaagggagaa 3101
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>gb|AC102044.7| Mus musculus chromosome 9, clone RP23-303N8, complete sequence
          Length = 210347

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 186   ttcaattttcagaacaagggagaa 209
             ||||||||||||| ||||||||||
Sbjct: 51427 ttcaattttcagagcaagggagaa 51404
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>gb|AC141111.25| Medicago truncatula clone mth2-20c17, complete sequence
          Length = 113836

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 151   acacattcaaaatcaccaac 170
             ||||||||||||||||||||
Sbjct: 13078 acacattcaaaatcaccaac 13097
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>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 361     ctgccggcgccggcgccgac 380
               ||||||||||||||||||||
Sbjct: 4681598 ctgccggcgccggcgccgac 4681617
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>emb|BX842574.1| Mycobacterium tuberculosis H37Rv complete genome; segment 3/13
          Length = 349564

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 418   cgacgcggtcgacgaggccg 437
             ||||||||||||||||||||
Sbjct: 81877 cgacgcggtcgacgaggccg 81896
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>emb|BX248336.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 3/14
          Length = 320050

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 418    cgacgcggtcgacgaggccg 437
              ||||||||||||||||||||
Sbjct: 100919 cgacgcggtcgacgaggccg 100938
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>gb|AC114930.2| Homo sapiens chromosome 5 clone CTD-2017A19, complete sequence
          Length = 100233

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 179   catttgtttcaattttcaga 198
             ||||||||||||||||||||
Sbjct: 84839 catttgtttcaattttcaga 84858
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>dbj|AK092564.1| Homo sapiens cDNA FLJ35245 fis, clone PROST2002897, moderately
           similar to Oryctolagus cuniculus CARP mRNA
          Length = 2455

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 386 ggcctccttgaccccggtgc 405
           ||||||||||||||||||||
Sbjct: 725 ggcctccttgaccccggtgc 744
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>gb|AC107223.5| Homo sapiens BAC clone RP11-1289C17 from 4, complete sequence
          Length = 183515

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 71     tcagttacaaggcatgacca 90
              ||||||||||||||||||||
Sbjct: 112016 tcagttacaaggcatgacca 112035
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>gb|AC010342.5|AC010342 Homo sapiens chromosome 5 clone CTD-2015B23, complete sequence
          Length = 126010

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 179   catttgtttcaattttcaga 198
             ||||||||||||||||||||
Sbjct: 28900 catttgtttcaattttcaga 28919
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>gb|AC108125.4| Homo sapiens chromosome 16 clone RP11-58C22, complete sequence
          Length = 153746

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 165   accaacaagcaaagcatttg 184
             ||||||||||||||||||||
Sbjct: 89563 accaacaagcaaagcatttg 89582
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>gb|AC074178.1|AC074178 Homo sapiens PAC clone RP5-1098O20 from 8, complete sequence
          Length = 107549

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 183   tgtttcaattttcagaacaa 202
             ||||||||||||||||||||
Sbjct: 10582 tgtttcaattttcagaacaa 10601
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>gb|AF069291.1|AF069291 Homo sapiens BAC clone 255A7 from 8q21 containing NBS1 gene, complete
             sequence
          Length = 184919

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 183   tgtttcaattttcagaacaa 202
             ||||||||||||||||||||
Sbjct: 36336 tgtttcaattttcagaacaa 36355
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>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 418     cgacgcggtcgacgaggccg 437
               ||||||||||||||||||||
Sbjct: 4609509 cgacgcggtcgacgaggccg 4609528


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,598,464
Number of Sequences: 3902068
Number of extensions: 4598464
Number of successful extensions: 143232
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 142404
Number of HSP's gapped (non-prelim): 827
length of query: 487
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 465
effective length of database: 17,147,199,772
effective search space: 7973447893980
effective search space used: 7973447893980
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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