>HSF30_LYCPE (P41152) Heat shock factor protein HSF30 (Heat shock transcription|
           factor 30) (HSTF 30) (Heat stress transcription factor)
          Length = 351

 Score = 43.1 bits (100), Expect = 4e-04
 Identities = 22/72 (30%), Positives = 44/72 (61%)
 Frame = -3

Query: 503 TEVVRLKKEQSTIDDRVAAMWRRVQETERKPKQMLAFLLTIVGDRDTLQRLVANSGNAAS 324
           TE+V+L+++Q +  +++ AM  +++  ERK  QM++FL  I  +   LQ+ +    +   
Sbjct: 160 TEIVKLRQQQQSTRNQIIAMGEKIETQERKQVQMMSFLAKIFSNPTFLQQYLDKQVHRK- 218

Query: 323 GDQEPVEGGEKR 288
            D++ +E G+KR
Sbjct: 219 -DKQRIEVGQKR 229

>HSF3_ARATH (O81821) Heat shock factor protein 3 (HSF 3) (Heat shock|
           transcription factor 3) (HSTF 3)
          Length = 481

 Score = 40.8 bits (94), Expect = 0.002
 Identities = 23/77 (29%), Positives = 47/77 (61%)
 Frame = -3

Query: 500 EVVRLKKEQSTIDDRVAAMWRRVQETERKPKQMLAFLLTIVGDRDTLQRLVANSGNAASG 321
           E+VRL+++Q   ++++  + ++VQ  E++ +QM++FL   V     L +LV  + N   G
Sbjct: 164 ELVRLRQQQQATENQLQNVGQKVQVMEQRQQQMMSFLAKAVQSPGFLNQLVQQNNN--DG 221

Query: 320 DQEPVEGGEKRARLLLD 270
           +++ + G  K+ RL +D
Sbjct: 222 NRQ-IPGSNKKRRLPVD 237

>HSF8_LYCPE (P41153) Heat shock factor protein HSF8 (Heat shock transcription|
           factor 8) (HSTF 8) (Heat stress transcription factor)
          Length = 527

 Score = 38.1 bits (87), Expect = 0.014
 Identities = 21/71 (29%), Positives = 40/71 (56%)
 Frame = -3

Query: 500 EVVRLKKEQSTIDDRVAAMWRRVQETERKPKQMLAFLLTIVGDRDTLQRLVANSGNAASG 321
           E+VRL+++Q + D+++  M +R+Q  E + +QM++FL   V     L + V     +   
Sbjct: 189 ELVRLRQQQQSTDNQLQGMVQRLQGMELRQQQMMSFLAKAVNSPGFLAQFVQQQNES--- 245

Query: 320 DQEPVEGGEKR 288
           ++   EG +KR
Sbjct: 246 NKRIAEGSKKR 256

>HSF8_LYCES (Q40152) Heat shock factor protein HSF8 (Heat shock transcription|
           factor 8) (HSTF 8) (Heat stress transcription factor)
          Length = 527

 Score = 37.0 bits (84), Expect = 0.031
 Identities = 21/71 (29%), Positives = 39/71 (54%)
 Frame = -3

Query: 500 EVVRLKKEQSTIDDRVAAMWRRVQETERKPKQMLAFLLTIVGDRDTLQRLVANSGNAASG 321
           E+VRL+++Q   D+++  M +R+Q  E + +QM++FL   V     L + V     +   
Sbjct: 187 ELVRLRQQQQATDNQLQGMVQRLQGMELRQQQMMSFLAKAVNRPGFLAQFVQQQNES--- 243

Query: 320 DQEPVEGGEKR 288
           ++   EG +KR
Sbjct: 244 NKRIAEGSKKR 254

>HSF2_ARATH (Q9SCW5) Heat shock factor protein 2 (HSF 2) (Heat shock|
           transcription factor 2) (HSTF 2)
          Length = 468

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 19/71 (26%), Positives = 36/71 (50%)
 Frame = -3

Query: 500 EVVRLKKEQSTIDDRVAAMWRRVQETERKPKQMLAFLLTIVGDRDTLQRLVANSGNAASG 321
           E+VRL+++Q   +  +  + ++V   E++ +QM++FL   V     L +    S  A   
Sbjct: 159 ELVRLRQQQQVTEHHLQNVGQKVHVMEQRQQQMMSFLAKAVQSPGFLNQFSQQSNEA--- 215

Query: 320 DQEPVEGGEKR 288
           +Q   E  +KR
Sbjct: 216 NQHISESNKKR 226

>POLG_HCVHK (Q01403) Genome polyprotein [Contains: Core protein p21 (Capsid|
           protein C) (p21); Core protein p19; Envelope
           glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2
           (NS1) (gp68) (gp70)] (Fragment)
          Length = 519

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 15/42 (35%), Positives = 23/42 (54%)
 Frame = +1

Query: 355 RCSVSRSPTMVRRNASICLGFRSVSCTRRHMAATLSSMVLCS 480
           RC V+ +PT+  RNAS+       +  RRH+   + +  LCS
Sbjct: 236 RCWVALTPTLAARNASV-----PTTTIRRHVDLLVGAATLCS 272

>POLG_HCVH4 (Q01404) Genome polyprotein [Contains: Core protein p21 (Capsid|
           protein C) (p21); Core protein p19; Envelope
           glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2
           (NS1) (gp68) (gp70)] (Fragment)
          Length = 519

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 15/42 (35%), Positives = 23/42 (54%)
 Frame = +1

Query: 355 RCSVSRSPTMVRRNASICLGFRSVSCTRRHMAATLSSMVLCS 480
           RC V+ +PT+  RNAS+       +  RRH+   + +  LCS
Sbjct: 236 RCWVALTPTLAARNASV-----PTTTIRRHVDLLVGAATLCS 272

>POLG_HCVCO (Q9WMX2) Genome polyprotein [Contains: Core protein p21 (Capsid|
           protein C) (p21); Core protein p19; Envelope
           glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2
           (NS1) (gp68) (gp70); p7; Protease NS2-3 (EC 3.4.22.-)
           (p23); Serine protease/N
          Length = 3009

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 15/42 (35%), Positives = 23/42 (54%)
 Frame = +1

Query: 355 RCSVSRSPTMVRRNASICLGFRSVSCTRRHMAATLSSMVLCS 480
           RC V+ +PT+  RNAS+       +  RRH+   + +  LCS
Sbjct: 236 RCWVALTPTLAARNASV-----PTTTIRRHVDLLVGAAALCS 272

>POLG_HCVJA (P26662) Genome polyprotein [Contains: Core protein p21 (Capsid|
           protein C) (p21); Core protein p19; Envelope
           glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2
           (NS1) (gp68) (gp70); p7; Protease NS2-3 (EC 3.4.22.-)
           (p23); Serine protease/N
          Length = 3009

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 15/42 (35%), Positives = 23/42 (54%)
 Frame = +1

Query: 355 RCSVSRSPTMVRRNASICLGFRSVSCTRRHMAATLSSMVLCS 480
           RC V+ +PT+  RN+SI       +  RRH+   + +  LCS
Sbjct: 236 RCWVALTPTLAARNSSI-----PTTTIRRHVDLLVGAAALCS 272


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 45,486,198
Number of Sequences: 219361
Number of extensions: 634733
Number of successful extensions: 1802
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1782
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1802
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3696665728
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)