>PSA6_ORYSA (Q9LSU3) Proteasome subunit alpha type 6 (EC 3.4.25.1) (20S|
           proteasome alpha subunit A) (20S proteasome subunit
           alpha-1)
          Length = 246

 Score = 35.4 bits (80), Expect = 0.036
 Identities = 16/16 (100%), Positives = 16/16 (100%)
 Frame = -2

Query: 326 TTEEIDQHLTAISERD 279
           TTEEIDQHLTAISERD
Sbjct: 231 TTEEIDQHLTAISERD 246

>PSA6_TOBAC (Q9XG77) Proteasome subunit alpha type 6 (EC 3.4.25.1) (20S|
           proteasome alpha subunit A) (20S proteasome subunit
           alpha-1)
          Length = 246

 Score = 34.3 bits (77), Expect = 0.080
 Identities = 15/16 (93%), Positives = 16/16 (100%)
 Frame = -2

Query: 326 TTEEIDQHLTAISERD 279
           TTEEID+HLTAISERD
Sbjct: 231 TTEEIDEHLTAISERD 246

>PSA6_SOYBN (O48551) Proteasome subunit alpha type 6 (EC 3.4.25.1) (20S|
           proteasome alpha subunit A) (20S proteasome subunit
           alpha-1) (Proteasome iota subunit)
          Length = 246

 Score = 33.1 bits (74), Expect = 0.18
 Identities = 14/16 (87%), Positives = 16/16 (100%)
 Frame = -2

Query: 326 TTEEIDQHLTAISERD 279
           TT+EID+HLTAISERD
Sbjct: 231 TTDEIDEHLTAISERD 246

>PSA6A_ARATH (O81146) Proteasome subunit alpha type 6-A (EC 3.4.25.1)|
           (Proteasome subunit alpha type 1) (20S proteasome alpha
           subunit A-1) (Proteasome component 1)
          Length = 246

 Score = 32.7 bits (73), Expect = 0.23
 Identities = 14/16 (87%), Positives = 16/16 (100%)
 Frame = -2

Query: 326 TTEEIDQHLTAISERD 279
           TTEEI++HLTAISERD
Sbjct: 231 TTEEIEEHLTAISERD 246

>PSA6B_ARATH (O81147) Proteasome subunit alpha type 6-B (EC 3.4.25.1)|
           (Proteasome subunit alpha type 1) (20S proteasome alpha
           subunit A-2)
          Length = 246

 Score = 32.3 bits (72), Expect = 0.30
 Identities = 14/15 (93%), Positives = 15/15 (100%)
 Frame = -2

Query: 323 TEEIDQHLTAISERD 279
           TEEID+HLTAISERD
Sbjct: 232 TEEIDEHLTAISERD 246

>GBRA4_BOVIN (P20237) Gamma-aminobutyric-acid receptor alpha-4 subunit precursor|
           (GABA(A) receptor)
          Length = 556

 Score = 29.6 bits (65), Expect = 2.0
 Identities = 19/54 (35%), Positives = 28/54 (51%)
 Frame = -3

Query: 163 LPCISRIILCVVEFATIKFDVAGSCMFGLFYFLLLSLCGAATLSMLSLAINLPK 2
           +PCI  +IL  V F   K  V    +FG+   L ++     TLS+ +  I+LPK
Sbjct: 265 IPCIMTVILSQVSFWINKESVPARTVFGITTVLTMT-----TLSISARPISLPK 313

>IPYR_PLAF7 (O77392) Probable inorganic pyrophosphatase (EC 3.6.1.1)|
           (Pyrophosphate phospho-hydrolase) (PPase)
          Length = 380

 Score = 28.5 bits (62), Expect = 4.4
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = +2

Query: 62  EKKIKQPKHATASNIKFNRSKFNHTKDDP 148
           ++ IK+  +  A NI+FN  K N+  D+P
Sbjct: 323 KETIKEHDYVNAQNIQFNYDKLNNNDDEP 351

>FGF18_RAT (O88182) Fibroblast growth factor 18 precursor (FGF-18)|
          Length = 207

 Score = 28.1 bits (61), Expect = 5.7
 Identities = 14/36 (38%), Positives = 18/36 (50%), Gaps = 4/36 (11%)
 Frame = -3

Query: 265 CSCQCTHKLLFCF----MASQETFSESFHV*QGRRA 170
           C+C C H LL CF    +A++E      HV    RA
Sbjct: 8   CTCLCLHFLLLCFQVQVLAAEENVDFRIHVENQTRA 43

>FGF18_MOUSE (O89101) Fibroblast growth factor 18 precursor (FGF-18) (zFGF5)|
          Length = 207

 Score = 28.1 bits (61), Expect = 5.7
 Identities = 14/36 (38%), Positives = 18/36 (50%), Gaps = 4/36 (11%)
 Frame = -3

Query: 265 CSCQCTHKLLFCF----MASQETFSESFHV*QGRRA 170
           C+C C H LL CF    +A++E      HV    RA
Sbjct: 8   CTCLCLHFLLLCFQVQVLAAEENVDFRIHVENQTRA 43

>TMIGD_BOVIN (Q3T113) Transmembrane and immunoglobulin domain-containing protein|
           precursor
          Length = 261

 Score = 28.1 bits (61), Expect = 5.7
 Identities = 15/38 (39%), Positives = 21/38 (55%)
 Frame = -3

Query: 214 ETFSESFHV*QGRRASTLPCISRIILCVVEFATIKFDV 101
           ET ++ FH+    + ST+P    I  CVV F T+ F V
Sbjct: 201 ETKTKDFHLIVKDKGSTVPIEPIIAACVVVFLTLVFGV 238

>TAT_SIVVG (P27982) TAT protein (Transactivating regulatory protein)|
          Length = 119

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 16/46 (34%), Positives = 21/46 (45%)
 Frame = -3

Query: 295 PLASATELCDCSCQCTHKLLFCFMASQETFSESFHV*QGRRASTLP 158
           PL   T  C C C C H  L CF+  Q+    ++H  + RR    P
Sbjct: 22  PLKRCTNKCYCKCCCYHCQL-CFL--QKGLGVTYHAPRIRRKKIAP 64


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 45,561,813
Number of Sequences: 219361
Number of extensions: 789401
Number of successful extensions: 1915
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1875
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1914
length of database: 80,573,946
effective HSP length: 84
effective length of database: 62,147,622
effective search space used: 1491542928
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)