ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart48c08 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_197074.1| Oryza sativa (japonica cultivar-group) unknown protein (OSJNBa0029C15.6), mRNA Length = 2184 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Minus Query: 288 gacgacgacgagcagcaggaggacg 312 ||||||||||||||||||||||||| Sbjct: 80 gacgacgacgagcagcaggaggacg 56
>gb|AC087182.12| Oryza sativa chromosome 10 BAC OSJNBa0029C15 genomic sequence, complete sequence Length = 148816 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Plus Query: 288 gacgacgacgagcagcaggaggacg 312 ||||||||||||||||||||||||| Sbjct: 103955 gacgacgacgagcagcaggaggacg 103979
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Minus Query: 288 gacgacgacgagcagcaggaggacg 312 ||||||||||||||||||||||||| Sbjct: 17828086 gacgacgacgagcagcaggaggacg 17828062
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Minus Query: 288 gacgacgacgagcagcaggaggacg 312 ||||||||||||||||||||||||| Sbjct: 17837339 gacgacgacgagcagcaggaggacg 17837315
>ref|XM_483127.1| Oryza sativa (japonica cultivar-group), mRNA Length = 396 Score = 44.1 bits (22), Expect = 0.35 Identities = 28/30 (93%) Strand = Plus / Minus Query: 290 cgacgacgagcagcaggaggacgccggcga 319 ||||| |||||||||||| ||||||||||| Sbjct: 133 cgacgccgagcagcaggatgacgccggcga 104
>ref|NM_187684.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2532 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Minus Query: 297 gagcagcaggaggacgccggcgagga 322 ||||||||||||||||||| |||||| Sbjct: 30 gagcagcaggaggacgccgacgagga 5
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Minus Query: 297 gagcagcaggaggacgccggcgagga 322 ||||||||||||||||||| |||||| Sbjct: 6345768 gagcagcaggaggacgccgacgagga 6345743
>gb|AC105364.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1743A09, complete sequence Length = 146568 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Minus Query: 297 gagcagcaggaggacgccggcgagga 322 ||||||||||||||||||| |||||| Sbjct: 25894 gagcagcaggaggacgccgacgagga 25869
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 44.1 bits (22), Expect = 0.35 Identities = 28/30 (93%) Strand = Plus / Minus Query: 290 cgacgacgagcagcaggaggacgccggcga 319 ||||| |||||||||||| ||||||||||| Sbjct: 24407340 cgacgccgagcagcaggatgacgccggcga 24407311 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 296 cgagcagcaggaggacgccggcga 319 |||||||||||| ||||||||||| Sbjct: 17644741 cgagcagcaggatgacgccggcga 17644764
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Minus Query: 297 gagcagcaggaggacgccggcgagga 322 ||||||||||||||||||| |||||| Sbjct: 6344981 gagcagcaggaggacgccgacgagga 6344956
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 284 gcgcgacgacgacgagcagcag 305 |||||||||||||||||||||| Sbjct: 2430315 gcgcgacgacgacgagcagcag 2430294 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 285 cgcgacgacgacgagcagcaggag 308 ||||| |||||||||||||||||| Sbjct: 2755649 cgcgaagacgacgagcagcaggag 2755626
>dbj|AP005148.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1142B04 Length = 161964 Score = 44.1 bits (22), Expect = 0.35 Identities = 28/30 (93%) Strand = Plus / Minus Query: 290 cgacgacgagcagcaggaggacgccggcga 319 ||||| |||||||||||| ||||||||||| Sbjct: 23056 cgacgccgagcagcaggatgacgccggcga 23027
>dbj|AK098871.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001B07, full insert sequence Length = 2756 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Minus Query: 297 gagcagcaggaggacgccggcgagga 322 ||||||||||||||||||| |||||| Sbjct: 68 gagcagcaggaggacgccgacgagga 43
>dbj|AK098866.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001A09, full insert sequence Length = 2770 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Minus Query: 297 gagcagcaggaggacgccggcgagga 322 ||||||||||||||||||| |||||| Sbjct: 75 gagcagcaggaggacgccgacgagga 50
>dbj|AK067131.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013095L11, full insert sequence Length = 2728 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Plus Query: 297 gagcagcaggaggacgccggcgagga 322 ||||||||||||||||||| |||||| Sbjct: 2371 gagcagcaggaggacgccgacgagga 2396
>dbj|AK060765.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-033-A08, full insert sequence Length = 2830 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Minus Query: 297 gagcagcaggaggacgccggcgagga 322 ||||||||||||||||||| |||||| Sbjct: 74 gagcagcaggaggacgccgacgagga 49
>ref|XM_467892.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1032 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 290 cgacgacgagcagcaggaggacgcc 314 |||||||||||||||||| |||||| Sbjct: 300 cgacgacgagcagcaggacgacgcc 276
>gb|BT018874.1| Zea mays clone EL01N0563E02.d mRNA sequence Length = 1646 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 289 acgacgacgagcagcaggaggacgccggc 317 |||||| |||||||||| ||||||||||| Sbjct: 72 acgacggcgagcagcagcaggacgccggc 44
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 281 gctgcgcgacgacgacgagca 301 ||||||||||||||||||||| Sbjct: 2859154 gctgcgcgacgacgacgagca 2859134
>gb|AC125780.2| Oryza sativa (japonica culitvar-group) chromosome 11 BAC clone OSJNBa0030I15, complete sequence Length = 148498 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 291 gacgacgagcagcaggaggacgccggcga 319 |||| |||||||||||| ||||||||||| Sbjct: 23947 gacgccgagcagcaggatgacgccggcga 23975
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome Length = 4406967 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 298 agcagcaggaggacgccggcgagga 322 |||||||||||||||||| |||||| Sbjct: 1725528 agcagcaggaggacgccgacgagga 1725552
>gb|AC121327.3| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0016O23, complete sequence Length = 149400 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 291 gacgacgagcagcaggaggacgccggcga 319 |||| |||||||||||| ||||||||||| Sbjct: 144895 gacgccgagcagcaggatgacgccggcga 144923
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 267 ctgggcgccagcgagctgcgc 287 ||||||||||||||||||||| Sbjct: 4234395 ctgggcgccagcgagctgcgc 4234415
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 291 gacgacgagcagcaggaggacgccggcga 319 |||| |||||||||||| ||||||||||| Sbjct: 23956080 gacgccgagcagcaggatgacgccggcga 23956108
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 290 cgacgacgagcagcaggaggacgcc 314 |||||||||||||||||| |||||| Sbjct: 31951510 cgacgacgagcagcaggacgacgcc 31951534 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 282 ctgcgcgacgacgacgagca 301 |||||||||||||||||||| Sbjct: 20215220 ctgcgcgacgacgacgagca 20215239
>dbj|AP004814.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0471A11 Length = 157740 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 290 cgacgacgagcagcaggaggacgcc 314 |||||||||||||||||| |||||| Sbjct: 112511 cgacgacgagcagcaggacgacgcc 112535
>ref|XM_317470.2| Anopheles gambiae str. PEST ENSANGP00000012304 (ENSANGG00000009815), partial mRNA Length = 4083 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 288 gacgacgacgagcagcaggag 308 ||||||||||||||||||||| Sbjct: 2938 gacgacgacgagcagcaggag 2958
>dbj|AK111266.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-180-F07, full insert sequence Length = 1032 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 290 cgacgacgagcagcaggaggacgcc 314 |||||||||||||||||| |||||| Sbjct: 300 cgacgacgagcagcaggacgacgcc 276
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 285 cgcgacgacgacgagcagcag 305 ||||||||||||||||||||| Sbjct: 1297459 cgcgacgacgacgagcagcag 1297439
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 291 gacgacgagcagcaggaggacgccggcga 319 |||| |||||||||||| ||||||||||| Sbjct: 24267749 gacgccgagcagcaggatgacgccggcga 24267777
>ref|XM_550580.1| Oryza sativa (japonica cultivar-group), mRNA Length = 465 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 287 cgacgacgacgagcagcagg 306 |||||||||||||||||||| Sbjct: 39 cgacgacgacgagcagcagg 58
>ref|NM_185475.2| Oryza sativa (japonica cultivar-group), mRNA Length = 3084 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 cgacgacgacgagcagcagg 306 |||||||||||||||||||| Sbjct: 275 cgacgacgacgagcagcagg 256
>ref|XM_482082.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3262 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 296 cgagcagcaggaggacgccggcga 319 |||||||||||| ||||||||||| Sbjct: 1906 cgagcagcaggatgacgccggcga 1883
>ref|XM_476160.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 630 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 278 cgagctgcgcgacgacgacgagca 301 |||||||| ||||||||||||||| Sbjct: 348 cgagctgctcgacgacgacgagca 371
>ref|XM_463353.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 600 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 279 gagctgcgcgacgacgacga 298 |||||||||||||||||||| Sbjct: 471 gagctgcgcgacgacgacga 452
>ref|XM_473503.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1713 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 286 gcgacgacgacgagcagcag 305 |||||||||||||||||||| Sbjct: 110 gcgacgacgacgagcagcag 91
>ref|XM_366102.1| Magnaporthe grisea 70-15 hypothetical protein (MG10322.4) partial mRNA Length = 765 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 316 gcgaggaacgccgaagccgccggg 339 |||||| ||||||||||||||||| Sbjct: 285 gcgagggacgccgaagccgccggg 262
>gb|AC136226.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0067H15, complete sequence Length = 184316 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 278 cgagctgcgcgacgacgacgagca 301 |||||||| ||||||||||||||| Sbjct: 75207 cgagctgctcgacgacgacgagca 75230
>gb|AC127549.3| Mus musculus BAC clone RP24-510G5 from chromosome 5, complete sequence Length = 152564 Score = 40.1 bits (20), Expect = 5.4 Identities = 32/36 (88%) Strand = Plus / Minus Query: 287 cgacgacgacgagcagcaggaggacgccggcgagga 322 ||||||||||||| || ||||||||| || |||||| Sbjct: 122726 cgacgacgacgaggaggaggaggacgacgacgagga 122691
>emb|CR380952.1| Candida glabrata strain CBS138 chromosome F complete sequence Length = 927101 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 10 ttgcaattgctcaaatcaaa 29 |||||||||||||||||||| Sbjct: 141865 ttgcaattgctcaaatcaaa 141884
>emb|AL939105.1|SCO939105 Streptomyces coelicolor A3(2) complete genome; segment 2/29 Length = 291000 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 291 gacgacgagcagcaggagga 310 |||||||||||||||||||| Sbjct: 141879 gacgacgagcagcaggagga 141898
>emb|AL606694.3|OSJN00110 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0078D11, complete sequence Length = 115006 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 286 gcgacgacgacgagcagcag 305 |||||||||||||||||||| Sbjct: 44758 gcgacgacgacgagcagcag 44777
>gb|AC115847.19| Mus musculus chromosome 5, clone RP24-245J15, complete sequence Length = 182243 Score = 40.1 bits (20), Expect = 5.4 Identities = 32/36 (88%) Strand = Plus / Plus Query: 287 cgacgacgacgagcagcaggaggacgccggcgagga 322 ||||||||||||| || ||||||||| || |||||| Sbjct: 175049 cgacgacgacgaggaggaggaggacgacgacgagga 175084
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 286 gcgacgacgacgagcagcag 305 |||||||||||||||||||| Sbjct: 28158321 gcgacgacgacgagcagcag 28158340
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 287 cgacgacgacgagcagcagg 306 |||||||||||||||||||| Sbjct: 1467310 cgacgacgacgagcagcagg 1467329
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 278 cgagctgcgcgacgacgacgagca 301 |||||||| ||||||||||||||| Sbjct: 6950284 cgagctgctcgacgacgacgagca 6950307
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 279 gagctgcgcgacgacgacga 298 |||||||||||||||||||| Sbjct: 22542814 gagctgcgcgacgacgacga 22542795
>gb|AE004834.1| Pseudomonas aeruginosa PAO1, section 395 of 529 of the complete genome Length = 11537 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 276 agcgagctgcgcgacgacgacgag 299 |||||||||||||||| ||||||| Sbjct: 9392 agcgagctgcgcgacggcgacgag 9415
>gb|AC017004.4| Homo sapiens BAC clone RP11-88C6 from 2, complete sequence Length = 184850 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 340 aatagcttgctctcccccat 359 |||||||||||||||||||| Sbjct: 23448 aatagcttgctctcccccat 23429
>dbj|AP002838.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0038F22 Length = 101666 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 287 cgacgacgacgagcagcagg 306 |||||||||||||||||||| Sbjct: 74596 cgacgacgacgagcagcagg 74615
>dbj|AP004877.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0472F10 Length = 136076 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 282 ctgcgcgacgacgacgagca 301 |||||||||||||||||||| Sbjct: 88526 ctgcgcgacgacgacgagca 88545
>dbj|AP001168.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, clone:P0425F02 Length = 176979 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 287 cgacgacgacgagcagcagg 306 |||||||||||||||||||| Sbjct: 175849 cgacgacgacgagcagcagg 175868
>dbj|AP003332.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1097D05 Length = 144879 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 279 gagctgcgcgacgacgacga 298 |||||||||||||||||||| Sbjct: 58551 gagctgcgcgacgacgacga 58532
>dbj|AP004397.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0436B06 Length = 148947 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 296 cgagcagcaggaggacgccggcga 319 |||||||||||| ||||||||||| Sbjct: 121391 cgagcagcaggatgacgccggcga 121414
>dbj|AP003962.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1705_C03 Length = 118339 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 296 cgagcagcaggaggacgccggcga 319 |||||||||||| ||||||||||| Sbjct: 30130 cgagcagcaggatgacgccggcga 30153
>dbj|AK106449.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-103-E10, full insert sequence Length = 3083 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 cgacgacgacgagcagcagg 306 |||||||||||||||||||| Sbjct: 275 cgacgacgacgagcagcagg 256
>dbj|AK072348.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023050N03, full insert sequence Length = 3262 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 296 cgagcagcaggaggacgccggcga 319 |||||||||||| ||||||||||| Sbjct: 1906 cgagcagcaggatgacgccggcga 1883
>dbj|AK065280.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002L23, full insert sequence Length = 1096 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 278 cgagctgcgcgacgacgacgagca 301 |||||||| ||||||||||||||| Sbjct: 498 cgagctgctcgacgacgacgagca 521
>dbj|AB248874.1| Streptomyces albulus sttH genes for hypothetical protein, streptothricin hydrolase, putative lipase, complete and partial cds Length = 2913 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 279 gagctgcgcgacgacgacgagcag 302 |||||||||||||||||| ||||| Sbjct: 2750 gagctgcgcgacgacgaccagcag 2727
>dbj|AB041884.1| Pseudomonas sp. E-3 metH', him genes for 9-hexadecenoic acid cis-trans isomerase, methionine synthaseme, partial and complete cds Length = 3606 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 267 ctgggcgccagcgagctgcg 286 |||||||||||||||||||| Sbjct: 99 ctgggcgccagcgagctgcg 80 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,650,676 Number of Sequences: 3902068 Number of extensions: 3650676 Number of successful extensions: 79487 Number of sequences better than 10.0: 60 Number of HSP's better than 10.0 without gapping: 62 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 78358 Number of HSP's gapped (non-prelim): 1129 length of query: 406 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 384 effective length of database: 17,147,199,772 effective search space: 6584524712448 effective search space used: 6584524712448 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
