>TIG_LISMO (Q8Y7L0) Trigger factor (TF)|
          Length = 427

 Score = 30.0 bits (66), Expect = 2.9
 Identities = 18/54 (33%), Positives = 29/54 (53%)
 Frame = -3

Query: 369 SETSPEQIEADLERAARGAPALQRSREIVGDRDAPADGVDTVFVQKAGRADTYA 208
           +E + E++EA+L++        +R  E+V   DAPA+  DTV +   G  D  A
Sbjct: 131 TELTTEELEAELKQLQ------ERQAELVVKEDAPAENGDTVILDFEGFKDGVA 178

>TIG_LISMF (Q720F5) Trigger factor (TF)|
          Length = 427

 Score = 30.0 bits (66), Expect = 2.9
 Identities = 18/54 (33%), Positives = 29/54 (53%)
 Frame = -3

Query: 369 SETSPEQIEADLERAARGAPALQRSREIVGDRDAPADGVDTVFVQKAGRADTYA 208
           +E + E++EA+L++        +R  E+V   DAPA+  DTV +   G  D  A
Sbjct: 131 TELTTEELEAELKQLQ------ERQAELVVKEDAPAENGDTVILDFEGFKDGVA 178

>TIG_LISIN (Q92C85) Trigger factor (TF)|
          Length = 427

 Score = 30.0 bits (66), Expect = 2.9
 Identities = 18/54 (33%), Positives = 29/54 (53%)
 Frame = -3

Query: 369 SETSPEQIEADLERAARGAPALQRSREIVGDRDAPADGVDTVFVQKAGRADTYA 208
           +E + E++EA+L++        +R  E+V   DAPA+  DTV +   G  D  A
Sbjct: 131 TELTTEELEAELKQLQ------ERQAELVVKEDAPAENGDTVILDFEGFKDGVA 178

>CRLF1_HUMAN (O75462) Cytokine receptor-like factor 1 precursor (Cytokine-like|
           factor 1) (CLF-1) (ZcytoR5)
          Length = 422

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 10/70 (14%)
 Frame = +2

Query: 257 PSAGASRSPT----ISLLLCRAGAPRAARSKSASICSGEVSDPAAVHQVG------CSIA 406
           P+A ++R P     + LLLC  GAPRA      ++ S +  DP  +  +G      CS+ 
Sbjct: 8   PAAQSARRPPPLLPLLLLLCVLGAPRAGSGAHTAVISPQ--DPTLL--IGSSLLATCSVH 63

Query: 407 RPPPPLTIHG 436
             PP  T  G
Sbjct: 64  GDPPGATAEG 73

>TYRO3_MOUSE (P55144) Tyrosine-protein kinase receptor TYRO3 precursor (EC|
           2.7.10.1) (Tyrosine-protein kinase RSE)
           (Tyrosine-protein kinase DTK) (TK19-2) (Etk2/tyro3)
          Length = 880

 Score = 29.3 bits (64), Expect = 5.0
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = +2

Query: 371 PAAVHQVGCSIARPPPPLTIHGWR 442
           P A  Q+ C    PP P+TI+ WR
Sbjct: 142 PNAPFQLSCEAVGPPEPVTIYWWR 165

>GLGA1_METCA (Q608L4) Glycogen synthase 1 (EC 2.4.1.21) (Starch [bacterial|
           glycogen] synthase 1)
          Length = 493

 Score = 28.9 bits (63), Expect = 6.6
 Identities = 23/70 (32%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
 Frame = +2

Query: 206 LAYVSARPAFCTKTVSTPSAGASRSPTISLLLCRAG-APRAARSKSASICSGEVSDPAAV 382
           + +  A+PAF  + V    A   R P +   +C+ G A   +  KSAS   G   +  A 
Sbjct: 421 IVFEPAKPAFLLEAVYRALA-LYREPEVWRAVCKCGMAKDFSWRKSASRYVGLYREALAG 479

Query: 383 HQVGCSIARP 412
              GCSIA P
Sbjct: 480 MNAGCSIADP 489

>MUTA_STRCM (Q05064) Methylmalonyl-CoA mutase small subunit (EC 5.4.99.2)|
           (MCM-beta)
          Length = 616

 Score = 28.9 bits (63), Expect = 6.6
 Identities = 13/37 (35%), Positives = 19/37 (51%)
 Frame = +1

Query: 205 TSVCICAPGLLYKNRIDAVGRCVSIADYLSTSLQSRG 315
           T  C+C+  +LY  + +AV R +  A  L   L  RG
Sbjct: 551 TVACLCSSDVLYAEQAEAVARALKSAGALRVFLAGRG 587

>EGR1_MOUSE (P08046) Early growth response protein 1 (EGR-1) (Krox-24 protein)|
           (Transcription factor Zif268) (Nerve growth
           factor-induced protein A) (NGFI-A)
          Length = 533

 Score = 28.9 bits (63), Expect = 6.6
 Identities = 14/35 (40%), Positives = 19/35 (54%)
 Frame = +2

Query: 176 HSVYRRSAILLAYVSARPAFCTKTVSTPSAGASRS 280
           HS +   ++   + S  PAF T+  S PSAG S S
Sbjct: 477 HSGFPSPSVATTFASVPPAFPTQVSSFPSAGVSSS 511

>NIFX_RHISN (P55675) Protein nifX|
          Length = 160

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 17/34 (50%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
 Frame = +2

Query: 293 LLLCRA-GAPRAARSKSASICSGEVSDPAAVHQV 391
           LL CRA G P AAR  SA I    V +P A+  V
Sbjct: 92  LLFCRAIGGPSAARVVSAKIHPIRVGEPEAIQDV 125

>2A5D_YEAST (P38903) Serine/threonine-protein phosphatase 2A 56 kDa regulatory|
           subunit delta isoform (PP2A, B subunit, B' delta
           isoform) (Protein RTS1) (Protein SCS1)
          Length = 757

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 19/69 (27%), Positives = 32/69 (46%), Gaps = 5/69 (7%)
 Frame = +2

Query: 239 TKTVSTPSAGASRSPTISLLLCRAGAPRAARSKSASICSGEVSDPAAVHQVGCS-----I 403
           TKT +TPS+ +S S + S+    + + +   S+     S +   P+   + G S     I
Sbjct: 91  TKTATTPSSSSSSSRSSSVSRSGSSSTKKTSSRKGQEQSKQSQQPSQSQKQGSSSSSAAI 150

Query: 404 ARPPPPLTI 430
             P P LT+
Sbjct: 151 MNPTPVLTV 159

>TYRO3_HUMAN (Q06418) Tyrosine-protein kinase receptor TYRO3 precursor (EC|
           2.7.10.1) (Tyrosine-protein kinase RSE)
           (Tyrosine-protein kinase SKY) (Tyrosine-protein kinase
           DTK) (Protein-tyrosine kinase byk)
          Length = 890

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = +2

Query: 371 PAAVHQVGCSIARPPPPLTIHGWRRT 448
           P A  Q+ C    PP P+TI  WR T
Sbjct: 152 PNAPFQLSCEAVGPPEPVTIVWWRGT 177

>SMS1_LOPAM (P01169) Somatostatin-1 precursor (Somatostatin I) [Contains:|
           Somatostatin-14]
          Length = 121

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 13/22 (59%), Positives = 14/22 (63%)
 Frame = -3

Query: 369 SETSPEQIEADLERAARGAPAL 304
           +E  PE   ADLERAA G P L
Sbjct: 80  AEGGPEDAHADLERAASGGPLL 101

>Y4BA_RHISN (P55368) Hypothetical 78.7 kDa protein y4bA/y4pH|
          Length = 694

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
 Frame = -1

Query: 299 EVER*SAIETHRPTASIRFLYKRPG-AQIHTLVVSRYGGRPSEEAVA 162
           ++ R   ++ HR  ++ R+LY+ PG  ++     SRYGGR     VA
Sbjct: 640 QLGRKGTLKRHRYASNHRYLYEPPGNVRLEKGAGSRYGGRQPRLIVA 686

>TTC9_HUMAN (Q92623) Tetratricopeptide repeat protein 9 (TPR repeat protein 9)|
           (Fragment)
          Length = 336

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 18/44 (40%), Positives = 20/44 (45%)
 Frame = +2

Query: 305 RAGAPRAARSKSASICSGEVSDPAAVHQVGCSIARPPPPLTIHG 436
           R G  R  R  SA+   G  S PAA         RPPPPL + G
Sbjct: 109 RRGGGRMERKGSAAGAKGNPSPPAAGEG-----QRPPPPLCVPG 147


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 56,319,320
Number of Sequences: 219361
Number of extensions: 994751
Number of successful extensions: 3164
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 3060
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3162
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2909956200
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)