ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart48c05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AB233453.1| Oryza sativa (japonica cultivar-group) OsPPCK2L ... 123 5e-25
2dbj|AB233452.1| Oryza sativa (japonica cultivar-group) OsPPCK2S ... 123 5e-25
3ref|XM_466833.1| Oryza sativa (japonica cultivar-group), mRNA 100 8e-18
4dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 100 8e-18
5dbj|AP006523.2| Oryza sativa (japonica cultivar-group) genomic D... 100 8e-18
6gb|AY911414.1| Zea mays phosphoenolpyruvate carboxylase kinase 2... 84 5e-13
7gb|AF399915.1|AF399915 Sorghum bicolor phosphoenolpyruvate carbo... 76 1e-10
8gb|BT018830.1| Zea mays clone EL01N0551C10.d mRNA sequence 68 3e-08
9gb|BT018640.1| Zea mays clone EL01N0504G05.d mRNA sequence 68 3e-08
10gb|AY911416.1| Zea mays phosphoenolpyruvate carboxylase kinase 4... 68 3e-08
11gb|AY911415.1| Zea mays phosphoenolpyruvate carboxylase kinase 3... 68 3e-08
12ref|XM_473187.1| Oryza sativa (japonica cultivar-group), predic... 64 4e-07
13dbj|AB234234.1| Oryza sativa (japonica cultivar-group) OsPPCK3 m... 64 4e-07
14dbj|AK066885.1| Oryza sativa (japonica cultivar-group) cDNA clon... 64 4e-07
15emb|AL731616.5|OSJN00262 Oryza sativa genomic DNA, chromosome 4,... 48 0.025
16dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.025
17gb|AE005674.1| Shigella flexneri 2a str. 301, complete genome 44 0.40
18gb|AC129716.3| Oryza sativa (japonica cultivar-group) chromosome... 44 0.40
19ref|XM_813237.1| Trypanosoma cruzi strain CL Brener hypothetical... 44 0.40
20gb|AE014075.1| Escherichia coli CFT073, complete genome 44 0.40
21gb|CP000243.1| Escherichia coli UTI89, complete genome 44 0.40
22gb|U00096.2| Escherichia coli K-12 MG1655, complete genome 44 0.40
23dbj|AP009048.1| Escherichia coli W3110 DNA, complete genome 44 0.40
24gb|AC010042.8| Drosophila melanogaster 3L BAC RP98-5K6 (Roswell ... 44 0.40
25ref|NM_206299.1| Drosophila melanogaster Clock CG7391-RC, transc... 44 0.40
26ref|NM_170628.1| Drosophila melanogaster Clock CG7391-RB, transc... 44 0.40
27ref|NM_079240.2| Drosophila melanogaster Clock CG7391-RA, transc... 44 0.40
28ref|NM_001014576.1| Drosophila melanogaster Clock CG7391-RD, tra... 44 0.40
29ref|NM_001014575.1| Drosophila melanogaster Clock CG7391-RE, tra... 44 0.40
30ref|NM_001014574.1| Drosophila melanogaster Clock CG7391-RF, tra... 44 0.40
31gb|AC091225.2| Drosophila melanogaster 3L BAC RP98-34B24 (Roswel... 44 0.40
32ref|XM_687846.1| PREDICTED: Danio rerio similar to Nuclear recep... 44 0.40
33emb|BX296530.7| Zebrafish DNA sequence from clone DKEY-22H2 in l... 44 0.40
34gb|AC079022.2|AC079022 Oryza sativa chromosome 5 clone P0574H01,... 44 0.40
35dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.40
36gb|AE014073.1| Shigella flexneri 2a str. 2457T, complete genome 44 0.40
37gb|AE003557.4| Drosophila melanogaster chromosome 3L, section 28... 44 0.40
38gb|AF067207.1|AF067207 Drosophila melanogaster CLOCK mRNA, compl... 44 0.40
39dbj|D16557.1|ECOICC Escherichia coli gene for Icc protein, compl... 44 0.40
40gb|AF069997.1|AF069997 Drosophila melanogaster CLOCK mRNA, compl... 44 0.40
41gb|AF065133.1|AF065133 Drosophila melanogaster CLOCK (Clk) mRNA,... 44 0.40
42gb|AE005174.2| Escherichia coli O157:H7 EDL933, complete genome 44 0.40
43dbj|BA000007.2| Escherichia coli O157:H7 DNA, complete genome 44 0.40
44gb|CP000034.1| Shigella dysenteriae Sd197, complete genome 44 0.40
45gb|U28377.1|ECU28377 Escherichia coli K-12 genome; approximately... 44 0.40
46gb|CP000036.1| Shigella boydii Sb227, complete genome 44 0.40
47gb|CP000038.1| Shigella sonnei Ss046, complete genome 44 0.40
48gb|AC102156.16| Mus musculus chromosome 18, clone RP23-334L7, co... 42 1.6
49ref|XM_514700.1| PREDICTED: Pan troglodytes LOC458308 (LOC458308... 42 1.6
50gb|AY225363.1| Pan troglodytes nuclear receptor coactivator 3 (N... 42 1.6
51gb|AF241732.1| Homo sapiens chromosome X clone XXcos-P117 map p1... 42 1.6
52gb|AF241731.2| Homo sapiens chromosome X clone LL0XNC01-45P13 ma... 42 1.6
53gb|AC157903.3| Mus musculus chromosome 18, clone RP23-341E18, co... 42 1.6
54gb|AY462627.1| Plasmodium falciparum erythrocyte membrane protei... 42 1.6
55ref|NM_181659.1| Homo sapiens nuclear receptor coactivator 3 (NC... 42 1.6
56ref|NM_006534.2| Homo sapiens nuclear receptor coactivator 3 (NC... 42 1.6
57emb|AL034418.5|HS1049G16 Human DNA sequence from clone RP5-1049G... 42 1.6
58gb|BC092516.1| Homo sapiens nuclear receptor coactivator 3, tran... 42 1.6
59gb|BC097784.1| Xenopus laevis cDNA clone MGC:115491 IMAGE:686863... 42 1.6
60gb|AC173996.2| Pan troglodytes chromosome X clone PTB-074P14 map... 42 1.6
61gb|BC044297.1| Xenopus laevis, Similar to RIKEN cDNA 4732481H14 ... 42 1.6
62gb|AC102162.6| Mus musculus chromosome 18, clone RP23-419P4, com... 42 1.6
63ref|XM_564199.1| Anopheles gambiae str. PEST ENSANGP00000028013 ... 42 1.6
64emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome comple... 42 1.6
65gb|AF016031.1|AF016031 Homo sapiens thyroid hormone receptor act... 42 1.6
66gb|AF012108.1|AF012108 Homo sapiens Amplified in Breast Cancer (... 42 1.6
67gb|AF010227.1|AF010227 Homo sapiens receptor-associated coactiva... 42 1.6
68gb|AF023138.1|DVBIGB5 Drosophila virilis big brain (bib) gene, e... 42 1.6
69dbj|AB209863.1| Homo sapiens mRNA for nuclear receptor coactivat... 42 1.6
70gb|BC086712.1| Danio rerio zgc:101641, mRNA (cDNA clone MGC:1016... 40 6.2
71ref|NM_124872.2| Arabidopsis thaliana ATRBP45A; RNA binding AT5G... 40 6.2
72gb|CP000097.1| Synechococcus sp. CC9902, complete genome 40 6.2
73ref|XM_450183.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.2
74gb|U80737.1|HSU80737 Homo sapiens CAGH16 mRNA, complete cds 40 6.2
75gb|AY225364.1| Gorilla gorilla nuclear receptor coactivator 3 (N... 40 6.2
76gb|AC135500.4| Oryza sativa (japonica cultivar-group) chromosome... 40 6.2
77gb|AC110036.8| Mus musculus chromosome 7, clone RP23-254F9, comp... 40 6.2
78ref|XM_959110.1| Neurospora crassa OR74A hypothetical protein (N... 40 6.2
79ref|XM_330712.1| Neurospora crassa OR74A hypothetical protein (N... 40 6.2
80gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 6.2
81gb|AC139939.6| Mus musculus chromosome 1, clone RP23-458O23, com... 40 6.2
82gb|AC136972.3| Oryza sativa chromosome 3 BAC OSJNBb0007E22 genom... 40 6.2
83emb|AL590226.23| Human DNA sequence from clone RP11-251M1 on chr... 40 6.2
84emb|BX294018.1|NCB8P8 Neurospora crassa DNA linkage group V BAC ... 40 6.2
85gb|AC161929.4| Mus musculus chromosome 7, clone RP23-120D7, comp... 40 6.2
86gb|AC087373.4| Homo sapiens chromosome 11, clone RP11-54J7, comp... 40 6.2
87ref|XM_694520.1| PREDICTED: Danio rerio similar to BMP2 inducibl... 40 6.2
88ref|XM_704579.1| PREDICTED: Danio rerio similar to BMP2 inducibl... 40 6.2
89ref|XM_689585.1| PREDICTED: Danio rerio similar to BMP2 inducibl... 40 6.2
90gb|AC158522.2| Mus musculus BAC clone RP23-400N21 from chromosom... 40 6.2
91emb|BX640536.6| Zebrafish DNA sequence from clone CH211-191A6 in... 40 6.2
92gb|AF324983.2|AF324983 Arabidopsis thaliana AT5g54900 (AT5g54900... 40 6.2
93dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
94dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
95dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
96dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
97dbj|AP003431.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
98ref|NM_001008644.1| Danio rerio zgc:101641 (zgc:101641), mRNA 40 6.2
99dbj|AP003808.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
100dbj|AP003806.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
101dbj|AB005232.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 40 6.2
102emb|AL929264.4| Zebrafish DNA sequence from clone CH211-59C24 in... 40 6.2
103emb|X87329.1|PSPAF1 P.anserina car1 gene 40 6.2
104dbj|AB109206.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
105emb|BX004805.6| Zebrafish DNA sequence from clone DKEY-196N8 in ... 40 6.2
106gb|AF036892.1|AF036892 Homo sapiens nuclear receptor coactivator... 40 6.2
107dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, comp... 40 6.2 
>dbj|AB233453.1| Oryza sativa (japonica cultivar-group) OsPPCK2L mRNA for
           phosphoenolpyruvate carboxylase kinase, complete cds
          Length = 1458

 Score =  123 bits (62), Expect = 5e-25
 Identities = 71/74 (95%)
 Strand = Plus / Minus

                                                                       
Query: 385 tcaggttggctgctccatcgctcggcctcctccgccgctcacgatccacgggtggcggag 444
           ||||||||||||||||||||||||| |||||||||||||||||||||||||||| | |||
Sbjct: 964 tcaggttggctgctccatcgctcgggctcctccgccgctcacgatccacgggtgaccgag 905

                         
Query: 445 gacttgctcggcgg 458
           ||||||||||||||
Sbjct: 904 gacttgctcggcgg 891
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>dbj|AB233452.1| Oryza sativa (japonica cultivar-group) OsPPCK2S mRNA for
           phosphoenolpyruvate carboxylase kinase, complete cds
          Length = 1404

 Score =  123 bits (62), Expect = 5e-25
 Identities = 71/74 (95%)
 Strand = Plus / Minus

                                                                       
Query: 385 tcaggttggctgctccatcgctcggcctcctccgccgctcacgatccacgggtggcggag 444
           ||||||||||||||||||||||||| |||||||||||||||||||||||||||| | |||
Sbjct: 910 tcaggttggctgctccatcgctcgggctcctccgccgctcacgatccacgggtgaccgag 851

                         
Query: 445 gacttgctcggcgg 458
           ||||||||||||||
Sbjct: 850 gacttgctcggcgg 837
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>ref|XM_466833.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 936

 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 53/54 (98%)
 Strand = Plus / Minus

                                                                 
Query: 385 tcaggttggctgctccatcgctcggcctcctccgccgctcacgatccacgggtg 438
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 936 tcaggttggctgctccatcgctcgggctcctccgccgctcacgatccacgggtg 883
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 53/54 (98%)
 Strand = Plus / Minus

                                                                      
Query: 385      tcaggttggctgctccatcgctcggcctcctccgccgctcacgatccacgggtg 438
                ||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 24954506 tcaggttggctgctccatcgctcgggctcctccgccgctcacgatccacgggtg 24954453
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>dbj|AP006523.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:B1215B07
          Length = 165957

 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 53/54 (98%)
 Strand = Plus / Minus

                                                                    
Query: 385    tcaggttggctgctccatcgctcggcctcctccgccgctcacgatccacgggtg 438
              ||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 115789 tcaggttggctgctccatcgctcgggctcctccgccgctcacgatccacgggtg 115736
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>gb|AY911414.1| Zea mays phosphoenolpyruvate carboxylase kinase 2 (PPCK2) mRNA,
           complete cds
          Length = 1024

 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 66/74 (89%)
 Strand = Plus / Minus

                                                                       
Query: 385 tcaggttggctgctccatcgctcggcctcctccgccgctcacgatccacgggtggcggag 444
           |||||||||| ||||||| || ||| |||||||||| |||||||||||||||||   |||
Sbjct: 897 tcaggttggccgctccattgcccgggctcctccgccactcacgatccacgggtgagcgag 838

                         
Query: 445 gacttgctcggcgg 458
           ||||||||||||||
Sbjct: 837 gacttgctcggcgg 824
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>gb|AF399915.1|AF399915 Sorghum bicolor phosphoenolpyruvate carboxylase kinase (PPCK) mRNA,
           complete cds
          Length = 1389

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 65/74 (87%)
 Strand = Plus / Minus

                                                                       
Query: 385 tcaggttggctgctccatcgctcggcctcctccgccgctcacgatccacgggtggcggag 444
           |||||||||| |||| || || ||  ||||||||||||||||||||||||||||   |||
Sbjct: 944 tcaggttggccgctcgattgcccgtgctcctccgccgctcacgatccacgggtgagcgag 885

                         
Query: 445 gacttgctcggcgg 458
           ||||||||||||||
Sbjct: 884 gacttgctcggcgg 871
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>gb|BT018830.1| Zea mays clone EL01N0551C10.d mRNA sequence
          Length = 1363

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 64/74 (86%)
 Strand = Plus / Minus

                                                                       
Query: 385 tcaggttggctgctccatcgctcggcctcctccgccgctcacgatccacgggtggcggag 444
           |||||||||| |||||||  | ||| |||| |||||||||||||||||||||||   |||
Sbjct: 960 tcaggttggccgctccatgccacgggctccgccgccgctcacgatccacgggtgagcgag 901

                         
Query: 445 gacttgctcggcgg 458
           ||| ||||||||||
Sbjct: 900 gacctgctcggcgg 887
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>gb|BT018640.1| Zea mays clone EL01N0504G05.d mRNA sequence
          Length = 1389

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 49/54 (90%)
 Strand = Plus / Minus

                                                                  
Query: 385  tcaggttggctgctccatcgctcggcctcctccgccgctcacgatccacgggtg 438
            |||||||||| ||||||| || ||| |||||||||| |||||||||||||||||
Sbjct: 1033 tcaggttggccgctccattgcccgggctcctccgccactcacgatccacgggtg 980
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>gb|AY911416.1| Zea mays phosphoenolpyruvate carboxylase kinase 4 (PPCK4) mRNA,
           complete cds
          Length = 1214

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 64/74 (86%)
 Strand = Plus / Minus

                                                                       
Query: 385 tcaggttggctgctccatcgctcggcctcctccgccgctcacgatccacgggtggcggag 444
           |||||||||| || ||| | |||||||||| || ||||||  |||||||||||| | |||
Sbjct: 883 tcaggttggccgcaccagctctcggcctccgcctccgctctggatccacgggtgcctgag 824

                         
Query: 445 gacttgctcggcgg 458
           ||||||||||||||
Sbjct: 823 gacttgctcggcgg 810
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>gb|AY911415.1| Zea mays phosphoenolpyruvate carboxylase kinase 3 (PPCK3) mRNA,
           complete cds
          Length = 995

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 64/74 (86%)
 Strand = Plus / Minus

                                                                       
Query: 385 tcaggttggctgctccatcgctcggcctcctccgccgctcacgatccacgggtggcggag 444
           |||||||||| |||||||  | ||| |||| |||||||||||||||||||||||   |||
Sbjct: 980 tcaggttggccgctccataccacgggctccgccgccgctcacgatccacgggtgagcgag 921

                         
Query: 445 gacttgctcggcgg 458
           ||| ||||||||||
Sbjct: 920 gacctgctcggcgg 907
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>ref|XM_473187.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 861

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 44/48 (91%)
 Strand = Plus / Minus

                                                           
Query: 411 ctcctccgccgctcacgatccacgggtggcggaggacttgctcggcgg 458
           ||||||| |||||||||||||||||||| |  ||||||||||||||||
Sbjct: 838 ctcctcctccgctcacgatccacgggtgcctcaggacttgctcggcgg 791
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>dbj|AB234234.1| Oryza sativa (japonica cultivar-group) OsPPCK3 mRNA for
           phosphoenolpyruvate carboxylase kinase, complete cds
          Length = 1224

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 44/48 (91%)
 Strand = Plus / Minus

                                                           
Query: 411 ctcctccgccgctcacgatccacgggtggcggaggacttgctcggcgg 458
           ||||||| |||||||||||||||||||| |  ||||||||||||||||
Sbjct: 881 ctcctcctccgctcacgatccacgggtgcctcaggacttgctcggcgg 834
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>dbj|AK066885.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013088G18, full
           insert sequence
          Length = 1224

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 44/48 (91%)
 Strand = Plus / Minus

                                                           
Query: 411 ctcctccgccgctcacgatccacgggtggcggaggacttgctcggcgg 458
           ||||||| |||||||||||||||||||| |  ||||||||||||||||
Sbjct: 881 ctcctcctccgctcacgatccacgggtgcctcaggacttgctcggcgg 834
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>emb|AL731616.5|OSJN00262 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0073E02,
             complete sequence
          Length = 139080

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                         
Query: 411   ctcctccgccgctcacgatccacgggtg 438
             ||||||| ||||||||||||||||||||
Sbjct: 59695 ctcctcctccgctcacgatccacgggtg 59668
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                            
Query: 411      ctcctccgccgctcacgatccacgggtg 438
                ||||||| ||||||||||||||||||||
Sbjct: 25842285 ctcctcctccgctcacgatccacgggtg 25842258
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>gb|AE005674.1| Shigella flexneri 2a str. 301, complete genome
          Length = 4607203

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 71      tgctgctgctgcatcatcatcc 92
               ||||||||||||||||||||||
Sbjct: 3169491 tgctgctgctgcatcatcatcc 3169470
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>gb|AC129716.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0068N01, complete sequence
          Length = 152233

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 70    ctgctgctgctgcatcatcatc 91
             ||||||||||||||||||||||
Sbjct: 63957 ctgctgctgctgcatcatcatc 63978
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>ref|XM_813237.1| Trypanosoma cruzi strain CL Brener hypothetical protein
            (Tc00.1047053511217.100) partial mRNA
          Length = 3693

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 70   ctgctgctgctgcatcatcatc 91
            ||||||||||||||||||||||
Sbjct: 3280 ctgctgctgctgcatcatcatc 3259
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>gb|AE014075.1| Escherichia coli CFT073, complete genome
          Length = 5231428

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 71      tgctgctgctgcatcatcatcc 92
               ||||||||||||||||||||||
Sbjct: 3613146 tgctgctgctgcatcatcatcc 3613125
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>gb|CP000243.1| Escherichia coli UTI89, complete genome
          Length = 5065741

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 71      tgctgctgctgcatcatcatcc 92
               ||||||||||||||||||||||
Sbjct: 3402094 tgctgctgctgcatcatcatcc 3402073
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>gb|U00096.2| Escherichia coli K-12 MG1655, complete genome
          Length = 4639675

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 71      tgctgctgctgcatcatcatcc 92
               ||||||||||||||||||||||
Sbjct: 3174377 tgctgctgctgcatcatcatcc 3174356
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>dbj|AP009048.1| Escherichia coli W3110 DNA, complete genome
          Length = 4646332

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 71      tgctgctgctgcatcatcatcc 92
               ||||||||||||||||||||||
Sbjct: 3175011 tgctgctgctgcatcatcatcc 3174990
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>gb|AC010042.8| Drosophila melanogaster 3L BAC RP98-5K6 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 157225

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 70    ctgctgctgctgcatcatcatc 91
             ||||||||||||||||||||||
Sbjct: 41501 ctgctgctgctgcatcatcatc 41480
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>ref|NM_206299.1| Drosophila melanogaster Clock CG7391-RC, transcript variant C (Clk),
            mRNA
          Length = 3588

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 70   ctgctgctgctgcatcatcatc 91
            ||||||||||||||||||||||
Sbjct: 2581 ctgctgctgctgcatcatcatc 2560
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>ref|NM_170628.1| Drosophila melanogaster Clock CG7391-RB, transcript variant B (Clk),
            mRNA
          Length = 3576

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 70   ctgctgctgctgcatcatcatc 91
            ||||||||||||||||||||||
Sbjct: 2569 ctgctgctgctgcatcatcatc 2548
to top
>ref|NM_079240.2| Drosophila melanogaster Clock CG7391-RA, transcript variant A (Clk),
            mRNA
          Length = 3684

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 70   ctgctgctgctgcatcatcatc 91
            ||||||||||||||||||||||
Sbjct: 2677 ctgctgctgctgcatcatcatc 2656
to top
>ref|NM_001014576.1| Drosophila melanogaster Clock CG7391-RD, transcript variant D (Clk),
            mRNA
          Length = 3696

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 70   ctgctgctgctgcatcatcatc 91
            ||||||||||||||||||||||
Sbjct: 2689 ctgctgctgctgcatcatcatc 2668
to top
>ref|NM_001014575.1| Drosophila melanogaster Clock CG7391-RE, transcript variant E (Clk),
            mRNA
          Length = 3694

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 70   ctgctgctgctgcatcatcatc 91
            ||||||||||||||||||||||
Sbjct: 2687 ctgctgctgctgcatcatcatc 2666
to top
>ref|NM_001014574.1| Drosophila melanogaster Clock CG7391-RF, transcript variant F (Clk),
            mRNA
          Length = 3694

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 70   ctgctgctgctgcatcatcatc 91
            ||||||||||||||||||||||
Sbjct: 2687 ctgctgctgctgcatcatcatc 2666
to top
>gb|AC091225.2| Drosophila melanogaster 3L BAC RP98-34B24 (Roswell Park Cancer
            Institute Drosophila BAC Library) complete sequence
          Length = 174774

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 70   ctgctgctgctgcatcatcatc 91
            ||||||||||||||||||||||
Sbjct: 7243 ctgctgctgctgcatcatcatc 7264
to top
>ref|XM_687846.1| PREDICTED: Danio rerio similar to Nuclear receptor coactivator 3
            (NCoA-3) (Thyroid hormone receptor activator molecule 1)
            (TRAM-1) (ACTR) (Receptor-associated coactivator 3)
            (RAC-3) (Amplified in breast cancer-1 protein) (AIB-1)
            (Steroid receptor coactivator protein 3) (...
            (LOC564519), partial mRNA
          Length = 3997

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 70   ctgctgctgctgcatcatcatc 91
            ||||||||||||||||||||||
Sbjct: 3858 ctgctgctgctgcatcatcatc 3837
to top
>emb|BX296530.7| Zebrafish DNA sequence from clone DKEY-22H2 in linkage group 11, complete
              sequence
          Length = 153078

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 70     ctgctgctgctgcatcatcatc 91
              ||||||||||||||||||||||
Sbjct: 152401 ctgctgctgctgcatcatcatc 152380
to top
>gb|AC079022.2|AC079022 Oryza sativa chromosome 5 clone P0574H01, complete sequence
          Length = 151589

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 70   ctgctgctgctgcatcatcatc 91
            ||||||||||||||||||||||
Sbjct: 2108 ctgctgctgctgcatcatcatc 2129
to top
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5,
              complete sequence
          Length = 29737217

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 70     ctgctgctgctgcatcatcatc 91
              ||||||||||||||||||||||
Sbjct: 402310 ctgctgctgctgcatcatcatc 402331
to top
>gb|AE014073.1| Shigella flexneri 2a str. 2457T, complete genome
          Length = 4599354

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 71      tgctgctgctgcatcatcatcc 92
               ||||||||||||||||||||||
Sbjct: 3158154 tgctgctgctgcatcatcatcc 3158133
to top
>gb|AE003557.4| Drosophila melanogaster chromosome 3L, section 28 of 83 of the
            complete sequence
          Length = 287988

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 70   ctgctgctgctgcatcatcatc 91
            ||||||||||||||||||||||
Sbjct: 1395 ctgctgctgctgcatcatcatc 1416
to top
>gb|AF067207.1|AF067207 Drosophila melanogaster CLOCK mRNA, complete cds
          Length = 3582

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 70   ctgctgctgctgcatcatcatc 91
            ||||||||||||||||||||||
Sbjct: 2675 ctgctgctgctgcatcatcatc 2654
to top
>dbj|D16557.1|ECOICC Escherichia coli gene for Icc protein, complete cds
          Length = 2360

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 71   tgctgctgctgcatcatcatcc 92
            ||||||||||||||||||||||
Sbjct: 1463 tgctgctgctgcatcatcatcc 1484
to top
>gb|AF069997.1|AF069997 Drosophila melanogaster CLOCK mRNA, complete cds
          Length = 3084

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 70   ctgctgctgctgcatcatcatc 91
            ||||||||||||||||||||||
Sbjct: 2319 ctgctgctgctgcatcatcatc 2298
to top
>gb|AF065133.1|AF065133 Drosophila melanogaster CLOCK (Clk) mRNA, complete cds
          Length = 3551

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 70   ctgctgctgctgcatcatcatc 91
            ||||||||||||||||||||||
Sbjct: 2568 ctgctgctgctgcatcatcatc 2547
to top
>gb|AE005174.2| Escherichia coli O157:H7 EDL933, complete genome
          Length = 5528445

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 71      tgctgctgctgcatcatcatcc 92
               ||||||||||||||||||||||
Sbjct: 3989764 tgctgctgctgcatcatcatcc 3989743
to top
>dbj|BA000007.2| Escherichia coli O157:H7 DNA, complete genome
          Length = 5498450

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 71      tgctgctgctgcatcatcatcc 92
               ||||||||||||||||||||||
Sbjct: 3922449 tgctgctgctgcatcatcatcc 3922428
to top
>gb|CP000034.1| Shigella dysenteriae Sd197, complete genome
          Length = 4369232

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 71      tgctgctgctgcatcatcatcc 92
               ||||||||||||||||||||||
Sbjct: 2971184 tgctgctgctgcatcatcatcc 2971205
to top
>gb|U28377.1|ECU28377 Escherichia coli K-12 genome; approximately 65 to 68 minutes
          Length = 141744

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 71     tgctgctgctgcatcatcatcc 92
              ||||||||||||||||||||||
Sbjct: 130743 tgctgctgctgcatcatcatcc 130722
to top
>gb|CP000036.1| Shigella boydii Sb227, complete genome
          Length = 4519823

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 71      tgctgctgctgcatcatcatcc 92
               ||||||||||||||||||||||
Sbjct: 2894336 tgctgctgctgcatcatcatcc 2894315
to top
>gb|CP000038.1| Shigella sonnei Ss046, complete genome
          Length = 4825265

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 71      tgctgctgctgcatcatcatcc 92
               ||||||||||||||||||||||
Sbjct: 3329864 tgctgctgctgcatcatcatcc 3329843
to top
>gb|AC102156.16| Mus musculus chromosome 18, clone RP23-334L7, complete sequence
          Length = 221632

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 62    tacaaaacctgctgctgctgc 82
             |||||||||||||||||||||
Sbjct: 11720 tacaaaacctgctgctgctgc 11740
to top
>ref|XM_514700.1| PREDICTED: Pan troglodytes LOC458308 (LOC458308), mRNA
          Length = 4464

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 70   ctgctgctgctgcatcatcat 90
            |||||||||||||||||||||
Sbjct: 3924 ctgctgctgctgcatcatcat 3904
to top
>gb|AY225363.1| Pan troglodytes nuclear receptor coactivator 3 (NCOA3) gene,
          partial cds
          Length = 131

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 70 ctgctgctgctgcatcatcat 90
          |||||||||||||||||||||
Sbjct: 49 ctgctgctgctgcatcatcat 29
to top
>gb|AF241732.1| Homo sapiens chromosome X clone XXcos-P117 map p11.4, complete
            sequence
          Length = 42930

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 110  acaacaaggagaaaacaaatt 130
            |||||||||||||||||||||
Sbjct: 5304 acaacaaggagaaaacaaatt 5284
to top
>gb|AF241731.2| Homo sapiens chromosome X clone LL0XNC01-45P13 map p11.4, complete
             sequence
          Length = 44977

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 110   acaacaaggagaaaacaaatt 130
             |||||||||||||||||||||
Sbjct: 24228 acaacaaggagaaaacaaatt 24208
to top
>gb|AC157903.3| Mus musculus chromosome 18, clone RP23-341E18, complete sequence
          Length = 198984

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 62    tacaaaacctgctgctgctgc 82
             |||||||||||||||||||||
Sbjct: 38055 tacaaaacctgctgctgctgc 38035
to top
>gb|AY462627.1| Plasmodium falciparum erythrocyte membrane protein 1 (var) mRNA,
           partial cds, CIDR1alpha region
          Length = 408

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 73  ctgctgctgcatcatcatcca 93
           |||||||||||||||||||||
Sbjct: 353 ctgctgctgcatcatcatcca 333
to top
>ref|NM_181659.1| Homo sapiens nuclear receptor coactivator 3 (NCOA3), transcript
            variant 1, mRNA
          Length = 7935

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 70   ctgctgctgctgcatcatcat 90
            |||||||||||||||||||||
Sbjct: 3958 ctgctgctgctgcatcatcat 3938
to top
>ref|NM_006534.2| Homo sapiens nuclear receptor coactivator 3 (NCOA3), transcript
            variant 2, mRNA
          Length = 7923

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 70   ctgctgctgctgcatcatcat 90
            |||||||||||||||||||||
Sbjct: 3946 ctgctgctgctgcatcatcat 3926
to top
>emb|AL034418.5|HS1049G16 Human DNA sequence from clone RP5-1049G16 on chromosome 20q12-13.2
             Contains the 3' end of the NCOA3 gene for nuclear receptor
             coactivator 3, an RPS3A (ribosomal protein S3A) pseudogene
             and the 3' end of the gene for a novel protein similar to
             glucosamine-6-sulfatases (SULF2) (sulfatase 2, H-SULF2,
             KIAA1247), complete sequence
          Length = 86453

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 70    ctgctgctgctgcatcatcat 90
             |||||||||||||||||||||
Sbjct: 67045 ctgctgctgctgcatcatcat 67025
to top
>gb|BC092516.1| Homo sapiens nuclear receptor coactivator 3, transcript variant 1,
            mRNA (cDNA clone MGC:104986 IMAGE:3064877), complete cds
          Length = 4807

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 70   ctgctgctgctgcatcatcat 90
            |||||||||||||||||||||
Sbjct: 3966 ctgctgctgctgcatcatcat 3946
to top
>gb|BC097784.1| Xenopus laevis cDNA clone MGC:115491 IMAGE:6868636, complete cds
          Length = 2376

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 68  acctgctgctgctgcatcatc 88
           |||||||||||||||||||||
Sbjct: 309 acctgctgctgctgcatcatc 289
to top
>gb|AC173996.2| Pan troglodytes chromosome X clone PTB-074P14 map human ortholog p11.4,
             complete sequence
          Length = 160565

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 110   acaacaaggagaaaacaaatt 130
             |||||||||||||||||||||
Sbjct: 76823 acaacaaggagaaaacaaatt 76803
to top
>gb|BC044297.1| Xenopus laevis, Similar to RIKEN cDNA 4732481H14 gene, clone
          IMAGE:5570087, mRNA
          Length = 2096

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 68 acctgctgctgctgcatcatc 88
          |||||||||||||||||||||
Sbjct: 22 acctgctgctgctgcatcatc 2
to top
>gb|AC102162.6| Mus musculus chromosome 18, clone RP23-419P4, complete sequence
          Length = 194165

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 62     tacaaaacctgctgctgctgc 82
              |||||||||||||||||||||
Sbjct: 148477 tacaaaacctgctgctgctgc 148497
to top
>ref|XM_564199.1| Anopheles gambiae str. PEST ENSANGP00000028013
           (ENSANGG00000022406), partial mRNA
          Length = 1731

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 71  tgctgctgctgcatcatcatc 91
           |||||||||||||||||||||
Sbjct: 764 tgctgctgctgcatcatcatc 744
to top
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence
          Length = 3716413

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 246     ccgtatcgacgccgtcggccggtgc 270
               |||||||||||||| ||||||||||
Sbjct: 2740212 ccgtatcgacgccggcggccggtgc 2740188
to top
>gb|AF016031.1|AF016031 Homo sapiens thyroid hormone receptor activator molecule (TRAM-1)
            mRNA, complete cds
          Length = 4668

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 70   ctgctgctgctgcatcatcat 90
            |||||||||||||||||||||
Sbjct: 3944 ctgctgctgctgcatcatcat 3924
to top
>gb|AF012108.1|AF012108 Homo sapiens Amplified in Breast Cancer (AIB1) mRNA, complete cds
          Length = 6835

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 70   ctgctgctgctgcatcatcat 90
            |||||||||||||||||||||
Sbjct: 3941 ctgctgctgctgcatcatcat 3921
to top
>gb|AF010227.1|AF010227 Homo sapiens receptor-associated coactivator 3 (RAC3) mRNA, complete
            cds
          Length = 4495

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 70   ctgctgctgctgcatcatcat 90
            |||||||||||||||||||||
Sbjct: 3826 ctgctgctgctgcatcatcat 3806
to top
>gb|AF023138.1|DVBIGB5 Drosophila virilis big brain (bib) gene, exon 4 and exon 5, complete
            cds
          Length = 3708

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 70   ctgctgctgctgcatcatcat 90
            |||||||||||||||||||||
Sbjct: 2442 ctgctgctgctgcatcatcat 2422
to top
>dbj|AB209863.1| Homo sapiens mRNA for nuclear receptor coactivator 3 isoform a
            variant protein
          Length = 5256

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 70   ctgctgctgctgcatcatcat 90
            |||||||||||||||||||||
Sbjct: 3948 ctgctgctgctgcatcatcat 3928
to top
>gb|BC086712.1| Danio rerio zgc:101641, mRNA (cDNA clone MGC:101641 IMAGE:7225745),
            complete cds
          Length = 2931

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 72   gctgctgctgcatcatcatc 91
            ||||||||||||||||||||
Sbjct: 1829 gctgctgctgcatcatcatc 1810
to top
>ref|NM_124872.2| Arabidopsis thaliana ATRBP45A; RNA binding AT5G54900 (ATRBP45A)
           mRNA, complete cds
          Length = 1413

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 70  ctgctgctgctgcatcatcatcca 93
           ||||||||| ||||||||||||||
Sbjct: 116 ctgctgctgttgcatcatcatcca 93
to top
>gb|CP000097.1| Synechococcus sp. CC9902, complete genome
          Length = 2234828

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 63     acaaaacctgctgctgctgc 82
              ||||||||||||||||||||
Sbjct: 694833 acaaaacctgctgctgctgc 694814
to top
>ref|XM_450183.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1632

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 403 cgctcggcctcctccgccgc 422
           ||||||||||||||||||||
Sbjct: 323 cgctcggcctcctccgccgc 342
to top
>gb|U80737.1|HSU80737 Homo sapiens CAGH16 mRNA, complete cds
          Length = 3487

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 71   tgctgctgctgcatcatcat 90
            ||||||||||||||||||||
Sbjct: 1155 tgctgctgctgcatcatcat 1136
to top
>gb|AY225364.1| Gorilla gorilla nuclear receptor coactivator 3 (NCOA3) gene,
          partial cds
          Length = 128

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 71 tgctgctgctgcatcatcat 90
          ||||||||||||||||||||
Sbjct: 48 tgctgctgctgcatcatcat 29
to top
>gb|AC135500.4| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0034J04
              map S1466, complete sequence
          Length = 140012

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 109    cacaacaaggagaaaacaaattaa 132
              |||||||||||||||| |||||||
Sbjct: 102149 cacaacaaggagaaaaaaaattaa 102126
to top
>gb|AC110036.8| Mus musculus chromosome 7, clone RP23-254F9, complete sequence
          Length = 185681

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 114    caaggagaaaacaaattaag 133
              ||||||||||||||||||||
Sbjct: 123474 caaggagaaaacaaattaag 123455
to top
>ref|XM_959110.1| Neurospora crassa OR74A hypothetical protein (NCU03277.1) partial
           mRNA
          Length = 1290

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 409 gcctcctccgccgctcacga 428
           ||||||||||||||||||||
Sbjct: 24  gcctcctccgccgctcacga 43
to top
>ref|XM_330712.1| Neurospora crassa OR74A hypothetical protein (NCU03277.1) partial
           mRNA
          Length = 1290

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 409 gcctcctccgccgctcacga 428
           ||||||||||||||||||||
Sbjct: 24  gcctcctccgccgctcacga 43
to top
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 109      cacaacaaggagaaaacaaattaa 132
                |||||||||||||||| |||||||
Sbjct: 22832218 cacaacaaggagaaaaaaaattaa 22832195
to top
>gb|AC139939.6| Mus musculus chromosome 1, clone RP23-458O23, complete sequence
          Length = 175033

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 284    actatctctctacttctctg 303
              ||||||||||||||||||||
Sbjct: 112899 actatctctctacttctctg 112918
to top
>gb|AC136972.3| Oryza sativa chromosome 3 BAC OSJNBb0007E22 genomic sequence, complete
             sequence
          Length = 184783

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 109   cacaacaaggagaaaacaaattaa 132
             |||||||||||||||| |||||||
Sbjct: 34748 cacaacaaggagaaaaaaaattaa 34725
to top
>emb|AL590226.23| Human DNA sequence from clone RP11-251M1 on chromosome 9 Contains a
             novel gene, the gene for  NEU1 protein (ZNEU1), the AGPAT2
             gene for 1-acylglycerol-3-phosphate O-acyltransferase 2
             (lysophosphatidic acid acyltransferase, beta), the 5' end
             of the gene for a novel protein similar to mouse
             pancreatitis-induced protein 49 (PIP49), the 3' end of a
             novel gene (FLJ30346) and seven CpG islands, complete
             sequence
          Length = 149567

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 300   tctgcagagccggggcccca 319
             ||||||||||||||||||||
Sbjct: 71154 tctgcagagccggggcccca 71135
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>emb|BX294018.1|NCB8P8 Neurospora crassa DNA linkage group V BAC clone B8P8
          Length = 75910

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 82    catcatcatccatcatgcag 101
             ||||||||||||||||||||
Sbjct: 17454 catcatcatccatcatgcag 17435
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>gb|AC161929.4| Mus musculus chromosome 7, clone RP23-120D7, complete sequence
          Length = 193326

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 114    caaggagaaaacaaattaag 133
              ||||||||||||||||||||
Sbjct: 176837 caaggagaaaacaaattaag 176818
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>gb|AC087373.4| Homo sapiens chromosome 11, clone RP11-54J7, complete sequence
          Length = 200604

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 285   ctatctctctacttctctgc 304
             ||||||||||||||||||||
Sbjct: 15045 ctatctctctacttctctgc 15064
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>ref|XM_694520.1| PREDICTED: Danio rerio similar to BMP2 inducible kinase
           (LOC573854), mRNA
          Length = 3077

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 72  gctgctgctgcatcatcatc 91
           ||||||||||||||||||||
Sbjct: 931 gctgctgctgcatcatcatc 912
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>ref|XM_704579.1| PREDICTED: Danio rerio similar to BMP2 inducible kinase, transcript
            variant 2 (LOC573082), mRNA
          Length = 1824

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 72   gctgctgctgcatcatcatc 91
            ||||||||||||||||||||
Sbjct: 1441 gctgctgctgcatcatcatc 1422
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>ref|XM_689585.1| PREDICTED: Danio rerio similar to BMP2 inducible kinase, transcript
            variant 1 (LOC573082), mRNA
          Length = 3175

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 72   gctgctgctgcatcatcatc 91
            ||||||||||||||||||||
Sbjct: 2031 gctgctgctgcatcatcatc 2012
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>gb|AC158522.2| Mus musculus BAC clone RP23-400N21 from chromosome 14, complete
            sequence
          Length = 209322

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 52   atatacacagtacaaaacct 71
            ||||||||||||||||||||
Sbjct: 2359 atatacacagtacaaaacct 2378
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>emb|BX640536.6| Zebrafish DNA sequence from clone CH211-191A6 in linkage group 5,
             complete sequence
          Length = 137923

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 72    gctgctgctgcatcatcatc 91
             ||||||||||||||||||||
Sbjct: 37207 gctgctgctgcatcatcatc 37226
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>gb|AF324983.2|AF324983 Arabidopsis thaliana AT5g54900 (AT5g54900/MBG8_17) mRNA, complete
           cds
          Length = 1395

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 70  ctgctgctgctgcatcatcatcca 93
           ||||||||| ||||||||||||||
Sbjct: 116 ctgctgctgttgcatcatcatcca 93
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 403      cgctcggcctcctccgccgc 422
                ||||||||||||||||||||
Sbjct: 21081572 cgctcggcctcctccgccgc 21081553
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 160      gctgctactgcttcttcact 179
                ||||||||||||||||||||
Sbjct: 16801183 gctgctactgcttcttcact 16801164
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 109      cacaacaaggagaaaacaaattaa 132
                |||||||||||||||| |||||||
Sbjct: 22825246 cacaacaaggagaaaaaaaattaa 22825223
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 152      tggagctagctgctactgct 171
                ||||||||||||||||||||
Sbjct: 38661393 tggagctagctgctactgct 38661374
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>dbj|AP003431.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1099D03
          Length = 191022

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 152    tggagctagctgctactgct 171
              ||||||||||||||||||||
Sbjct: 119366 tggagctagctgctactgct 119347
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>ref|NM_001008644.1| Danio rerio zgc:101641 (zgc:101641), mRNA
          Length = 2931

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 72   gctgctgctgcatcatcatc 91
            ||||||||||||||||||||
Sbjct: 1829 gctgctgctgcatcatcatc 1810
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>dbj|AP003808.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OJ1115_C05
          Length = 146585

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 160    gctgctactgcttcttcact 179
              ||||||||||||||||||||
Sbjct: 141095 gctgctactgcttcttcact 141076
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>dbj|AP003806.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1103_E04
          Length = 111354

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 160   gctgctactgcttcttcact 179
             ||||||||||||||||||||
Sbjct: 17750 gctgctactgcttcttcact 17731
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>dbj|AB005232.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MBG8
          Length = 80315

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 70    ctgctgctgctgcatcatcatcca 93
             ||||||||| ||||||||||||||
Sbjct: 54501 ctgctgctgttgcatcatcatcca 54478
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>emb|AL929264.4| Zebrafish DNA sequence from clone CH211-59C24 in linkage group 18,
            complete sequence
          Length = 171914

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 52   atatacacagtacaaaacct 71
            ||||||||||||||||||||
Sbjct: 5200 atatacacagtacaaaacct 5181
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>emb|X87329.1|PSPAF1 P.anserina car1 gene
          Length = 2204

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 70  ctgctgctgctgcatcatca 89
           ||||||||||||||||||||
Sbjct: 340 ctgctgctgctgcatcatca 359
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>dbj|AB109206.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
              clone: P0478E02
          Length = 140715

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 403    cgctcggcctcctccgccgc 422
              ||||||||||||||||||||
Sbjct: 102872 cgctcggcctcctccgccgc 102853
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>emb|BX004805.6| Zebrafish DNA sequence from clone DKEY-196N8 in linkage group 5,
             complete sequence
          Length = 83537

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 72    gctgctgctgcatcatcatc 91
             ||||||||||||||||||||
Sbjct: 70171 gctgctgctgcatcatcatc 70190
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>gb|AF036892.1|AF036892 Homo sapiens nuclear receptor coactivator (ACTR) mRNA, complete cds
          Length = 6754

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 71   tgctgctgctgcatcatcat 90
            ||||||||||||||||||||
Sbjct: 3908 tgctgctgctgcatcatcat 3889
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>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome
          Length = 3566135

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 403     cgctcggcctcctccgccgc 422
               ||||||||||||||||||||
Sbjct: 3220768 cgctcggcctcctccgccgc 3220787


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,032,986
Number of Sequences: 3902068
Number of extensions: 4032986
Number of successful extensions: 99165
Number of sequences better than 10.0: 107
Number of HSP's better than 10.0 without gapping: 107
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 98183
Number of HSP's gapped (non-prelim): 982
length of query: 458
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 436
effective length of database: 17,147,199,772
effective search space: 7476179100592
effective search space used: 7476179100592
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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