ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart48b07
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|AY614716.1| Triticum aestivum mitochondrial ATP synthase prec... 281 1e-72
2ref|XM_464007.1| Oryza sativa (japonica cultivar-group), mRNA 220 3e-54
3dbj|AK066913.1| Oryza sativa (japonica cultivar-group) cDNA clon... 220 3e-54
4gb|AY103737.1| Zea mays PCO126068 mRNA sequence 157 4e-35
5dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 141 3e-30
6dbj|AP004150.2| Oryza sativa (japonica cultivar-group) genomic D... 141 3e-30
7gb|BT013928.1| Lycopersicon esculentum clone 132926R, mRNA sequence 48 0.029
8emb|CR956386.6| Pig DNA sequence from clone CH242-152A8 on chrom... 42 1.8
9dbj|AK061919.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.8
10gb|AC156560.2| Mus musculus BAC clone RP24-358N14 from chromosom... 42 1.8
11gb|AC012377.5|AC012377 Homo sapiens chromosome 15 clone RP11-325... 42 1.8
12dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.8
13gb|AC023908.6|AC023908 Homo sapiens chromosome 15 clone RP11-37C... 42 1.8
14dbj|AK073546.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.8
15dbj|AK072146.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.8
16emb|AL772135.14| Mouse DNA sequence from clone RP23-162G11 on ch... 42 1.8
17gb|AY609461.1| Sus scrofa clone Clu_12354.scr.msk.p1.Contig4, mR... 42 1.8
18gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 42 1.8
19emb|BX000501.4|CNS08CDR Oryza sativa chromosome 11, . BAC OSJNBa... 42 1.8
20gb|AC164179.7| Mus musculus 10 BAC RP24-63J23 (Roswell Park Canc... 40 7.0
21ref|XM_748618.1| Aspergillus fumigatus Af293 hypothetical protei... 40 7.0
22gb|AC127374.4| Mus musculus BAC clone RP23-46G11 from chromosome... 40 7.0
23emb|Z68012.1|CET24D5 Caenorhabditis elegans Cosmid T24D5, comple... 40 7.0
24gb|AC122522.4| Mus musculus BAC clone RP24-486D23 from chromosom... 40 7.0
25ref|XM_671916.1| Plasmodium berghei strain ANKA fructose-bisphos... 40 7.0
26emb|AL445470.5| Human DNA sequence from clone RP11-421L10 on chr... 40 7.0
27emb|AL354941.10| Human DNA sequence from clone RP11-62E14 on chr... 40 7.0
28gb|AC069021.9| Homo sapiens chromosome 10 clone RP11-254K3, comp... 40 7.0
29dbj|AK128488.1| Homo sapiens cDNA FLJ46636 fis, clone TRACH3002188 40 7.0
30gb|AC008790.7| Homo sapiens chromosome 5 clone CTD-2040H20, comp... 40 7.0
31gb|AF247062.1|AF247062 Plasmodium berghei QIMR fructose 1,6-bisp... 40 7.0
32gb|AC150255.7| Aedes aegypti, clone XX-85K2, complete sequence 40 7.0
33gb|AC155311.2| Mus musculus BAC clone RP23-407F7 from chromosome... 40 7.0
34ref|NM_001010913.2| Homo sapiens chromosome 1 open reading frame... 40 7.0
35gb|AC132407.3| Mus musculus BAC clone RP23-343G12 from 8, comple... 40 7.0
36emb|AL365314.16| Mouse DNA sequence from clone RP23-106N23 on ch... 40 7.0
37emb|AJ012585.1|TTH012585 Tetrahymena thermophila macronuclear ge... 40 7.0

>gb|AY614716.1| Triticum aestivum mitochondrial ATP synthase precursor mRNA,
           complete cds; nuclear gene for mitochondrial product
          Length = 717

 Score =  281 bits (142), Expect = 1e-72
 Identities = 163/170 (95%)
 Strand = Plus / Minus

                                                                       
Query: 348 ctagaggaagtttctaatgtccaacttcctgacgtcaggcatctcctcatctttaaactc 407
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 717 ctagaggaagtttctaatgtccaacttcctgacgtcaggcatcccctcatctttaaactc 658

                                                                       
Query: 408 ctccctctttagttgaccctccattgcttcaacaacttccttcttaagttccgtcagctc 467
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 657 ctccctctttagttgaccctccattgcttcaacaacttccttcttgagttccgtcagctc 598

                                                             
Query: 468 agctttggcaatttgcatttcaagttcttcctcaatcttgggaagatcct 517
           ||||||||||| || ||||||||| |  ||||||||||||||||||||||
Sbjct: 597 agctttggcaagttccatttcaagattctcctcaatcttgggaagatcct 548



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>ref|XM_464007.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1126

 Score =  220 bits (111), Expect = 3e-54
 Identities = 156/171 (91%)
 Strand = Plus / Minus

                                                                       
Query: 347 cctagaggaagtttctaatgtccaacttcctgacgtcaggcatctcctcatctttaaact 406
           |||| ||||||||||| |||||||||||| |||| |||||||||||||| ||||| ||||
Sbjct: 809 cctacaggaagtttctgatgtccaacttcttgacatcaggcatctcctcgtctttgaact 750

                                                                       
Query: 407 cctccctctttagttgaccctccattgcttcaacaacttccttcttaagttccgtcagct 466
           ||||||||||||||||| |||||||||||||||||  |||||||||||| ||||||||||
Sbjct: 749 cctccctctttagttgaacctccattgcttcaacacattccttcttaagctccgtcagct 690

                                                              
Query: 467 cagctttggcaatttgcatttcaagttcttcctcaatcttgggaagatcct 517
           ||  ||||||||||| || |||||| |||||||||||||||||||||||||
Sbjct: 689 cacttttggcaatttccaattcaagctcttcctcaatcttgggaagatcct 639



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 257 gcttaaagcaccggctgtcacttgaaaagaaaa 289
           ||||| ||| |||||||||||| ||||||||||
Sbjct: 890 gcttacagcgccggctgtcactggaaaagaaaa 858



 Score = 40.1 bits (20), Expect = 7.0
 Identities = 30/32 (93%), Gaps = 1/32 (3%)
 Strand = Plus / Minus

                                           
Query: 211 ttcggtgcagttt-tattacaaagagcaagaa 241
           ||||||||||||| ||||||||| ||||||||
Sbjct: 938 ttcggtgcagtttttattacaaaaagcaagaa 907



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>dbj|AK066913.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013089B14, full
           insert sequence
          Length = 1126

 Score =  220 bits (111), Expect = 3e-54
 Identities = 156/171 (91%)
 Strand = Plus / Minus

                                                                       
Query: 347 cctagaggaagtttctaatgtccaacttcctgacgtcaggcatctcctcatctttaaact 406
           |||| ||||||||||| |||||||||||| |||| |||||||||||||| ||||| ||||
Sbjct: 809 cctacaggaagtttctgatgtccaacttcttgacatcaggcatctcctcgtctttgaact 750

                                                                       
Query: 407 cctccctctttagttgaccctccattgcttcaacaacttccttcttaagttccgtcagct 466
           ||||||||||||||||| |||||||||||||||||  |||||||||||| ||||||||||
Sbjct: 749 cctccctctttagttgaacctccattgcttcaacacattccttcttaagctccgtcagct 690

                                                              
Query: 467 cagctttggcaatttgcatttcaagttcttcctcaatcttgggaagatcct 517
           ||  ||||||||||| || |||||| |||||||||||||||||||||||||
Sbjct: 689 cacttttggcaatttccaattcaagctcttcctcaatcttgggaagatcct 639



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 257 gcttaaagcaccggctgtcacttgaaaagaaaa 289
           ||||| ||| |||||||||||| ||||||||||
Sbjct: 890 gcttacagcgccggctgtcactggaaaagaaaa 858



 Score = 40.1 bits (20), Expect = 7.0
 Identities = 30/32 (93%), Gaps = 1/32 (3%)
 Strand = Plus / Minus

                                           
Query: 211 ttcggtgcagttt-tattacaaagagcaagaa 241
           ||||||||||||| ||||||||| ||||||||
Sbjct: 938 ttcggtgcagtttttattacaaaaagcaagaa 907



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>gb|AY103737.1| Zea mays PCO126068 mRNA sequence
          Length = 1045

 Score =  157 bits (79), Expect = 4e-35
 Identities = 148/171 (86%)
 Strand = Plus / Minus

                                                                       
Query: 347 cctagaggaagtttctaatgtccaacttcctgacgtcaggcatctcctcatctttaaact 406
           |||| ||||||||||  |||||||  |||||||| |||||||||||||||||||  ||||
Sbjct: 859 cctacaggaagtttcggatgtccagtttcctgacatcaggcatctcctcatcttggaact 800

                                                                       
Query: 407 cctccctctttagttgaccctccattgcttcaacaacttccttcttaagttccgtcagct 466
           |||||||||| ||||||  ||||||||| ||||||  ||||||||||||||| |||||||
Sbjct: 799 cctccctcttgagttgagtctccattgcctcaacacattccttcttaagttcagtcagct 740

                                                              
Query: 467 cagctttggcaatttgcatttcaagttcttcctcaatcttgggaagatcct 517
           ||  ||||||||| | || ||||||||||| ||| ||||| ||||||||||
Sbjct: 739 cacttttggcaatctccaattcaagttctttctcgatcttaggaagatcct 689



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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score =  141 bits (71), Expect = 3e-30
 Identities = 98/107 (91%)
 Strand = Plus / Minus

                                                                           
Query: 411     cctctttagttgaccctccattgcttcaacaacttccttcttaagttccgtcagctcagc 470
               ||||||||||||| |||||||||||||||||  |||||||||||| ||||||||||||  
Sbjct: 1641220 cctctttagttgaacctccattgcttcaacacattccttcttaagctccgtcagctcact 1641161

                                                              
Query: 471     tttggcaatttgcatttcaagttcttcctcaatcttgggaagatcct 517
               ||||||||||| || |||||| |||||||||||||||||||||||||
Sbjct: 1641160 tttggcaatttccaattcaagctcttcctcaatcttgggaagatcct 1641114



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 61/67 (91%)
 Strand = Plus / Minus

                                                                           
Query: 347     cctagaggaagtttctaatgtccaacttcctgacgtcaggcatctcctcatctttaaact 406
               |||| ||||||||||| |||||||||||| |||| |||||||||||||| ||||| ||||
Sbjct: 1641455 cctacaggaagtttctgatgtccaacttcttgacatcaggcatctcctcgtctttgaact 1641396

                      
Query: 407     cctccct 413
               |||||||
Sbjct: 1641395 cctccct 1641389



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                                
Query: 257     gcttaaagcaccggctgtcacttgaaaagaaaa 289
               ||||| ||| |||||||||||| ||||||||||
Sbjct: 1641536 gcttacagcgccggctgtcactggaaaagaaaa 1641504



 Score = 40.1 bits (20), Expect = 7.0
 Identities = 30/32 (93%), Gaps = 1/32 (3%)
 Strand = Plus / Minus

                                               
Query: 211     ttcggtgcagtttt-attacaaagagcaagaa 241
               |||||||||||||| |||||||| ||||||||
Sbjct: 1641584 ttcggtgcagtttttattacaaaaagcaagaa 1641553



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>dbj|AP004150.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1007_D04
          Length = 125503

 Score =  141 bits (71), Expect = 3e-30
 Identities = 98/107 (91%)
 Strand = Plus / Minus

                                                                         
Query: 411   cctctttagttgaccctccattgcttcaacaacttccttcttaagttccgtcagctcagc 470
             ||||||||||||| |||||||||||||||||  |||||||||||| ||||||||||||  
Sbjct: 78323 cctctttagttgaacctccattgcttcaacacattccttcttaagctccgtcagctcact 78264

                                                            
Query: 471   tttggcaatttgcatttcaagttcttcctcaatcttgggaagatcct 517
             ||||||||||| || |||||| |||||||||||||||||||||||||
Sbjct: 78263 tttggcaatttccaattcaagctcttcctcaatcttgggaagatcct 78217



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 61/67 (91%)
 Strand = Plus / Minus

                                                                         
Query: 347   cctagaggaagtttctaatgtccaacttcctgacgtcaggcatctcctcatctttaaact 406
             |||| ||||||||||| |||||||||||| |||| |||||||||||||| ||||| ||||
Sbjct: 78558 cctacaggaagtttctgatgtccaacttcttgacatcaggcatctcctcgtctttgaact 78499

                    
Query: 407   cctccct 413
             |||||||
Sbjct: 78498 cctccct 78492



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                              
Query: 257   gcttaaagcaccggctgtcacttgaaaagaaaa 289
             ||||| ||| |||||||||||| ||||||||||
Sbjct: 78639 gcttacagcgccggctgtcactggaaaagaaaa 78607



 Score = 40.1 bits (20), Expect = 7.0
 Identities = 30/32 (93%), Gaps = 1/32 (3%)
 Strand = Plus / Minus

                                             
Query: 211   ttcggtgcagtttt-attacaaagagcaagaa 241
             |||||||||||||| |||||||| ||||||||
Sbjct: 78687 ttcggtgcagtttttattacaaaaagcaagaa 78656



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>gb|BT013928.1| Lycopersicon esculentum clone 132926R, mRNA sequence
          Length = 1154

 Score = 48.1 bits (24), Expect = 0.029
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 385 ggcatctcctcatctttaaactcctccctctt 416
           |||||||||||||| || ||||||||||||||
Sbjct: 810 ggcatctcctcatccttgaactcctccctctt 779



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>emb|CR956386.6| Pig DNA sequence from clone CH242-152A8 on chromosome 17, complete
             sequence
          Length = 197576

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 101   aatacaacagcagccgcaggc 121
             |||||||||||||||||||||
Sbjct: 78736 aatacaacagcagccgcaggc 78756



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>dbj|AK061919.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-042-B04, full
           insert sequence
          Length = 401

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 257 gcttaaagcaccggctgtcacttgaaaagaaaa 289
           ||||| ||| |||||||||||| ||||||||||
Sbjct: 112 gcttacagcgccggctgtcactggaaaagaaaa 80



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 347 cctagaggaagtttctaatgtccaacttc 375
           |||| ||||||||||| ||||||||||||
Sbjct: 31  cctacaggaagtttctgatgtccaacttc 3



 Score = 40.1 bits (20), Expect = 7.0
 Identities = 30/32 (93%), Gaps = 1/32 (3%)
 Strand = Plus / Minus

                                           
Query: 211 ttcggtgcagtttt-attacaaagagcaagaa 241
           |||||||||||||| |||||||| ||||||||
Sbjct: 160 ttcggtgcagtttttattacaaaaagcaagaa 129



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>gb|AC156560.2| Mus musculus BAC clone RP24-358N14 from chromosome 13, complete sequence
          Length = 163493

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 68     aacatcccatataattataat 88
              |||||||||||||||||||||
Sbjct: 126531 aacatcccatataattataat 126511



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>gb|AC012377.5|AC012377 Homo sapiens chromosome 15 clone RP11-325N19 map 15q14, complete
             sequence
          Length = 197782

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 353   ggaagtttctaatgtccaact 373
             |||||||||||||||||||||
Sbjct: 62156 ggaagtttctaatgtccaact 62136



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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11,
              complete sequence
          Length = 28386948

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 390    ctcctcatctttaaactcctc 410
              |||||||||||||||||||||
Sbjct: 151433 ctcctcatctttaaactcctc 151413



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>gb|AC023908.6|AC023908 Homo sapiens chromosome 15 clone RP11-37C7 map 15q14, complete sequence
          Length = 169670

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 353    ggaagtttctaatgtccaact 373
              |||||||||||||||||||||
Sbjct: 137323 ggaagtttctaatgtccaact 137303



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>dbj|AK073546.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033041K10, full
           insert sequence
          Length = 2621

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 390 ctcctcatctttaaactcctc 410
           |||||||||||||||||||||
Sbjct: 299 ctcctcatctttaaactcctc 279



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>dbj|AK072146.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013127P15, full
           insert sequence
          Length = 3101

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 390 ctcctcatctttaaactcctc 410
           |||||||||||||||||||||
Sbjct: 283 ctcctcatctttaaactcctc 263



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>emb|AL772135.14| Mouse DNA sequence from clone RP23-162G11 on chromosome 2, complete
              sequence
          Length = 230161

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 273    gtcacttgaaaagaaaaatcacaga 297
              |||||||||||| ||||||||||||
Sbjct: 113396 gtcacttgaaaaaaaaaatcacaga 113372



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>gb|AY609461.1| Sus scrofa clone Clu_12354.scr.msk.p1.Contig4, mRNA sequence
          Length = 1718

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 269 ggctgtcacttgaaaagaaaaatca 293
           ||||| |||||||||||||||||||
Sbjct: 281 ggctgccacttgaaaagaaaaatca 257



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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 390    ctcctcatctttaaactcctc 410
              |||||||||||||||||||||
Sbjct: 151433 ctcctcatctttaaactcctc 151413



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>emb|BX000501.4|CNS08CDR Oryza sativa chromosome 11, . BAC OSJNBa0032J07 of library OSJNBa from
              chromosome 11 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 160673

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 390    ctcctcatctttaaactcctc 410
              |||||||||||||||||||||
Sbjct: 153560 ctcctcatctttaaactcctc 153580



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>gb|AC164179.7| Mus musculus 10 BAC RP24-63J23 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 209011

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 267   ccggctgtcacttgaaaagaaaaa 290
             |||||||||||| |||||||||||
Sbjct: 90962 ccggctgtcactagaaaagaaaaa 90985



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>ref|XM_748618.1| Aspergillus fumigatus Af293 hypothetical protein (Afu5g09280) partial
            mRNA
          Length = 1497

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 432  tgcttcaacaacttccttct 451
            ||||||||||||||||||||
Sbjct: 1467 tgcttcaacaacttccttct 1448



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>gb|AC127374.4| Mus musculus BAC clone RP23-46G11 from chromosome 8, complete sequence
          Length = 180143

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 163    gaagaaacaaaactctcaac 182
              ||||||||||||||||||||
Sbjct: 143854 gaagaaacaaaactctcaac 143835



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>emb|Z68012.1|CET24D5 Caenorhabditis elegans Cosmid T24D5, complete sequence
          Length = 37666

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 435  ttcaacaacttccttcttaagttc 458
            |||||||||||| |||||||||||
Sbjct: 9785 ttcaacaacttctttcttaagttc 9808



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>gb|AC122522.4| Mus musculus BAC clone RP24-486D23 from chromosome 5, complete sequence
          Length = 186083

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 280    gaaaagaaaaatcacagatc 299
              ||||||||||||||||||||
Sbjct: 101387 gaaaagaaaaatcacagatc 101406



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>ref|XM_671916.1| Plasmodium berghei strain ANKA fructose-bisphosphate aldolase,
            (PB000757.02.0) partial mRNA
          Length = 1098

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 217  gcagttttattacaaagagc 236
            ||||||||||||||||||||
Sbjct: 985  gcagttttattacaaagagc 1004



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>emb|AL445470.5| Human DNA sequence from clone RP11-421L10 on chromosome 1 Contains a
             novel gene, complete sequence
          Length = 86332

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 477   aatttgcatttcaagttctt 496
             ||||||||||||||||||||
Sbjct: 69084 aatttgcatttcaagttctt 69103



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>emb|AL354941.10| Human DNA sequence from clone RP11-62E14 on chromosome 9 Contains part
             of the RFX3 gene for regulatory factor X 3 (influences HLA
             class II expression) and an RPL7 (ribosomal protein L7)
             pseudogene, complete sequence
          Length = 93029

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 274   tcacttgaaaagaaaaatca 293
             ||||||||||||||||||||
Sbjct: 12313 tcacttgaaaagaaaaatca 12332



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>gb|AC069021.9| Homo sapiens chromosome 10 clone RP11-254K3, complete sequence
          Length = 175464

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 313   aaacaccatgaggattatca 332
             ||||||||||||||||||||
Sbjct: 93972 aaacaccatgaggattatca 93953



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>dbj|AK128488.1| Homo sapiens cDNA FLJ46636 fis, clone TRACH3002188
          Length = 4492

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 477  aatttgcatttcaagttctt 496
            ||||||||||||||||||||
Sbjct: 1755 aatttgcatttcaagttctt 1736



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>gb|AC008790.7| Homo sapiens chromosome 5 clone CTD-2040H20, complete sequence
          Length = 117021

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 156   gcctaaggaagaaacaaaac 175
             ||||||||||||||||||||
Sbjct: 67601 gcctaaggaagaaacaaaac 67582



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>gb|AF247062.1|AF247062 Plasmodium berghei QIMR fructose 1,6-bisphosphate aldolase gene,
           partial cds
          Length = 1054

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 217 gcagttttattacaaagagc 236
           ||||||||||||||||||||
Sbjct: 962 gcagttttattacaaagagc 981



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>gb|AC150255.7| Aedes aegypti, clone XX-85K2, complete sequence
          Length = 164368

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 209   ttttcggtgcagttttattacaaa 232
             ||||||||||| ||||||||||||
Sbjct: 25488 ttttcggtgcatttttattacaaa 25511



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>gb|AC155311.2| Mus musculus BAC clone RP23-407F7 from chromosome 12, complete sequence
          Length = 166104

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 468   agctttggcaatttgcattt 487
             ||||||||||||||||||||
Sbjct: 62736 agctttggcaatttgcattt 62755



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>ref|NM_001010913.2| Homo sapiens chromosome 1 open reading frame 140 (C1orf140), mRNA
          Length = 4492

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 477  aatttgcatttcaagttctt 496
            ||||||||||||||||||||
Sbjct: 1755 aatttgcatttcaagttctt 1736



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>gb|AC132407.3| Mus musculus BAC clone RP23-343G12 from 8, complete sequence
          Length = 205357

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 163    gaagaaacaaaactctcaac 182
              ||||||||||||||||||||
Sbjct: 181093 gaagaaacaaaactctcaac 181112



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>emb|AL365314.16| Mouse DNA sequence from clone RP23-106N23 on chromosome 1, complete
             sequence
          Length = 182054

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 398   ctttaaactcctccctcttt 417
             ||||||||||||||||||||
Sbjct: 37909 ctttaaactcctccctcttt 37890



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>emb|AJ012585.1|TTH012585 Tetrahymena thermophila macronuclear gene encoding ribosomal protein
            L3, exons 1-2
          Length = 4634

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 433  gcttcaacaacttccttctt 452
            ||||||||||||||||||||
Sbjct: 1774 gcttcaacaacttccttctt 1755


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,166,930
Number of Sequences: 3902068
Number of extensions: 6166930
Number of successful extensions: 115632
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 115419
Number of HSP's gapped (non-prelim): 208
length of query: 517
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 494
effective length of database: 17,143,297,704
effective search space: 8468789065776
effective search space used: 8468789065776
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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