ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart48b06 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_467876.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1193 Score = 351 bits (177), Expect = 1e-93 Identities = 315/361 (87%) Strand = Plus / Minus Query: 120 gtggaagggtcgtaaagcgcaggaagcaagtacttcctgccatgcgcgccattacaattg 179 ||||| |||| ||| ||||| ||||||| ||| ||||| || | ||||||||| || Sbjct: 1036 gtggaggggttgtagagcgcgggaagcaggtatttcctcccgttcgcgccattggcgtta 977 Query: 180 tagctcgccccggtggcctggtccactttgaggtcgccggcgtagccagggtacgcgccg 239 ||||| |||||||| ||||| ||||| || || || |||||| | ||||||||||||||| Sbjct: 976 tagcttgccccggtcgcctgatccaccttcagctcaccggcgaatccagggtacgcgccg 917 Query: 240 ttgccgaagactcctgggcaggcggtggcggcctccagcggcgcgtcgctgctgccctgg 299 | ||||||||||| ||||| || ||||||||||||||||||||||| |||||||||||| Sbjct: 916 ctcccgaagactcccgggcacgccgtggcggcctccagcggcgcgtccctgctgccctgg 857 Query: 300 taatacccgtcgccgaacgggttggtcgccgcgccggcgagcatgctcgcgaggttcatg 359 || |||||||||||||||||||||||| ||| ||||||||||||||| ||||||||||| Sbjct: 856 tagtacccgtcgccgaacgggttggtcaccgtgccggcgagcatgctggcgaggttcatc 797 Query: 360 accatggcgtcggccccaacgtcgccgttgggcgccacgaggggcgcgtcctgggggccg 419 |||||| |||| ||||| | ||||||||||||||||||||| |||||| |||| |||||| Sbjct: 796 accatgccgtccgccccgatgtcgccgttgggcgccacgagcggcgcgccctgcgggccg 737 Query: 420 taggtgggctggtggaagggccacgcgcacgcgccggggcactgcgtctccgggttgccg 479 || ||||||||||||| |||||||||||| ||||||||||||||||| ||||||||||| Sbjct: 736 tacatgggctggtggaacggccacgcgcactcgccggggcactgcgtcgccgggttgccg 677 Query: 480 a 480 | Sbjct: 676 a 676
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 351 bits (177), Expect = 1e-93 Identities = 315/361 (87%) Strand = Plus / Plus Query: 120 gtggaagggtcgtaaagcgcaggaagcaagtacttcctgccatgcgcgccattacaattg 179 ||||| |||| ||| ||||| ||||||| ||| ||||| || | ||||||||| || Sbjct: 31853811 gtggaggggttgtagagcgcgggaagcaggtatttcctcccgttcgcgccattggcgtta 31853870 Query: 180 tagctcgccccggtggcctggtccactttgaggtcgccggcgtagccagggtacgcgccg 239 ||||| |||||||| ||||| ||||| || || || |||||| | ||||||||||||||| Sbjct: 31853871 tagcttgccccggtcgcctgatccaccttcagctcaccggcgaatccagggtacgcgccg 31853930 Query: 240 ttgccgaagactcctgggcaggcggtggcggcctccagcggcgcgtcgctgctgccctgg 299 | ||||||||||| ||||| || ||||||||||||||||||||||| |||||||||||| Sbjct: 31853931 ctcccgaagactcccgggcacgccgtggcggcctccagcggcgcgtccctgctgccctgg 31853990 Query: 300 taatacccgtcgccgaacgggttggtcgccgcgccggcgagcatgctcgcgaggttcatg 359 || |||||||||||||||||||||||| ||| ||||||||||||||| ||||||||||| Sbjct: 31853991 tagtacccgtcgccgaacgggttggtcaccgtgccggcgagcatgctggcgaggttcatc 31854050 Query: 360 accatggcgtcggccccaacgtcgccgttgggcgccacgaggggcgcgtcctgggggccg 419 |||||| |||| ||||| | ||||||||||||||||||||| |||||| |||| |||||| Sbjct: 31854051 accatgccgtccgccccgatgtcgccgttgggcgccacgagcggcgcgccctgcgggccg 31854110 Query: 420 taggtgggctggtggaagggccacgcgcacgcgccggggcactgcgtctccgggttgccg 479 || ||||||||||||| |||||||||||| ||||||||||||||||| ||||||||||| Sbjct: 31854111 tacatgggctggtggaacggccacgcgcactcgccggggcactgcgtcgccgggttgccg 31854170 Query: 480 a 480 | Sbjct: 31854171 a 31854171 Score = 111 bits (56), Expect = 2e-21 Identities = 196/240 (81%), Gaps = 2/240 (0%) Strand = Plus / Plus Query: 228 gggtacgcgccgttgccgaagactcctgggcaggcggtggcggcctccagcggcgcgtcg 287 |||||||| ||| ||||| |||| || || || || || ||||||||||||||||| || Sbjct: 31859334 gggtacgcaccgctgccgtagacccccggacacgccgtcgcggcctccagcggcgcctcc 31859393 Query: 288 ctgctgccctggtaatacccgtcgccgaacgggttggtcgccgcgccggcgagcatgctc 347 || ||||||||| ||||||||||||||||||||||| | ||||||||| |||||| Sbjct: 31859394 ttggggccctggtagaacccgtcgccgaacgggttggtcacgacgccggcgaccatgctg 31859453 Query: 348 gcgaggttcatgaccatggcgtcggccccaacgtcgccgttgggcgccacgaggggc-gc 406 |||| |||||| |||||| |||| ||| ||||||||| |||||| ||| || | | || Sbjct: 31859454 gcgatgttcatcaccatgccgtccatcccgacgtcgccgctgggcggcaccagcgccggc 31859513 Query: 407 gtcctgggggccgtaggtgggctggtggaagggccacgcgcacgcgccggggcactgcgt 466 || ||| || ||||| ||||||||||| |||||||||||| ||||||||||||||| Sbjct: 31859514 gt-ctgaggcccgtacaccggctggtggaacggccacgcgcactggccggggcactgcgt 31859572 Score = 103 bits (52), Expect = 5e-19 Identities = 208/260 (80%) Strand = Plus / Minus Query: 219 gcgtagccagggtacgcgccgttgccgaagactcctgggcaggcggtggcggcctccagc 278 ||||| || |||||||| || |||||| | ||||| | ||| |||||||||||||||||| Sbjct: 31870829 gcgtaacccgggtacgcccccttgccgtacactccggcgcacgcggtggcggcctccagc 31870770 Query: 279 ggcgcgtcgctgctgccctggtaatacccgtcgccgaacgggttggtcgccgcgccggcg 338 ||||||||| | ||||||| | | |||| ||||||||||||||| | | |||| || Sbjct: 31870769 ggcgcgtcggcgtcgccctggaagaagccgttgccgaacgggttggtgacggtgccgacg 31870710 Query: 339 agcatgctcgcgaggttcatgaccatggcgtcggccccaacgtcgccgttgggcgccacg 398 | ||| |||||| || |||||| ||||| | || |||||||||||||||| | | Sbjct: 31870709 atcatcgaggcgagggatatcaccatgccgtcgacgccgacgtcgccgttgggcggcgtg 31870650 Query: 399 aggggcgcgtcctgggggccgtaggtgggctggtggaagggccacgcgcacgcgccgggg 458 |||||||| |||| |||||||| ||||||||| | |||||||||||| ||||||| Sbjct: 31870649 aggggcgccgcctgcgggccgtacaccggctggtggtacggccacgcgcactggccgggg 31870590 Query: 459 cactgcgtctccgggttgcc 478 ||||| ||| |||||||||| Sbjct: 31870589 cactgggtcgccgggttgcc 31870570 Score = 54.0 bits (27), Expect = 4e-04 Identities = 137/171 (80%), Gaps = 2/171 (1%) Strand = Plus / Plus Query: 228 gggtacgcgccgttgccgaagactcctgggcaggcggtggcggcctccagcggcgcgtcg 287 |||||||||||| ||||| ||||||| ||||| || | | ||||||||||||||||| Sbjct: 31842855 gggtacgcgccgctgccgtagactcccgggcacgccgagcacgcctccagcggcgcgtc- 31842913 Query: 288 ctgctgccc-tggtaatacccgtcgccgaacgggttggtcgccgcgccggcgagcatgct 346 ||| |||| ||||| |||| |||||| ||||||||||| ||| |||||| | ||| Sbjct: 31842914 ctggggcccctggtagaacccatcgccgtacgggttggtcaccgtgccggccaccatcga 31842973 Query: 347 cgcgaggttcatgaccatggcgtcggccccaacgtcgccgttgggcgccac 397 |||||| |||| ||||| |||| || || |||||| |||||||||||| Sbjct: 31842974 ggcgaggatcatcaccatcccgtccgcgccgacgtcgttgttgggcgccac 31843024
>dbj|AP004814.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0471A11 Length = 157740 Score = 351 bits (177), Expect = 1e-93 Identities = 315/361 (87%) Strand = Plus / Plus Query: 120 gtggaagggtcgtaaagcgcaggaagcaagtacttcctgccatgcgcgccattacaattg 179 ||||| |||| ||| ||||| ||||||| ||| ||||| || | ||||||||| || Sbjct: 14812 gtggaggggttgtagagcgcgggaagcaggtatttcctcccgttcgcgccattggcgtta 14871 Query: 180 tagctcgccccggtggcctggtccactttgaggtcgccggcgtagccagggtacgcgccg 239 ||||| |||||||| ||||| ||||| || || || |||||| | ||||||||||||||| Sbjct: 14872 tagcttgccccggtcgcctgatccaccttcagctcaccggcgaatccagggtacgcgccg 14931 Query: 240 ttgccgaagactcctgggcaggcggtggcggcctccagcggcgcgtcgctgctgccctgg 299 | ||||||||||| ||||| || ||||||||||||||||||||||| |||||||||||| Sbjct: 14932 ctcccgaagactcccgggcacgccgtggcggcctccagcggcgcgtccctgctgccctgg 14991 Query: 300 taatacccgtcgccgaacgggttggtcgccgcgccggcgagcatgctcgcgaggttcatg 359 || |||||||||||||||||||||||| ||| ||||||||||||||| ||||||||||| Sbjct: 14992 tagtacccgtcgccgaacgggttggtcaccgtgccggcgagcatgctggcgaggttcatc 15051 Query: 360 accatggcgtcggccccaacgtcgccgttgggcgccacgaggggcgcgtcctgggggccg 419 |||||| |||| ||||| | ||||||||||||||||||||| |||||| |||| |||||| Sbjct: 15052 accatgccgtccgccccgatgtcgccgttgggcgccacgagcggcgcgccctgcgggccg 15111 Query: 420 taggtgggctggtggaagggccacgcgcacgcgccggggcactgcgtctccgggttgccg 479 || ||||||||||||| |||||||||||| ||||||||||||||||| ||||||||||| Sbjct: 15112 tacatgggctggtggaacggccacgcgcactcgccggggcactgcgtcgccgggttgccg 15171 Query: 480 a 480 | Sbjct: 15172 a 15172 Score = 111 bits (56), Expect = 2e-21 Identities = 196/240 (81%), Gaps = 2/240 (0%) Strand = Plus / Plus Query: 228 gggtacgcgccgttgccgaagactcctgggcaggcggtggcggcctccagcggcgcgtcg 287 |||||||| ||| ||||| |||| || || || || || ||||||||||||||||| || Sbjct: 20335 gggtacgcaccgctgccgtagacccccggacacgccgtcgcggcctccagcggcgcctcc 20394 Query: 288 ctgctgccctggtaatacccgtcgccgaacgggttggtcgccgcgccggcgagcatgctc 347 || ||||||||| ||||||||||||||||||||||| | ||||||||| |||||| Sbjct: 20395 ttggggccctggtagaacccgtcgccgaacgggttggtcacgacgccggcgaccatgctg 20454 Query: 348 gcgaggttcatgaccatggcgtcggccccaacgtcgccgttgggcgccacgaggggc-gc 406 |||| |||||| |||||| |||| ||| ||||||||| |||||| ||| || | | || Sbjct: 20455 gcgatgttcatcaccatgccgtccatcccgacgtcgccgctgggcggcaccagcgccggc 20514 Query: 407 gtcctgggggccgtaggtgggctggtggaagggccacgcgcacgcgccggggcactgcgt 466 || ||| || ||||| ||||||||||| |||||||||||| ||||||||||||||| Sbjct: 20515 gt-ctgaggcccgtacaccggctggtggaacggccacgcgcactggccggggcactgcgt 20573 Score = 103 bits (52), Expect = 5e-19 Identities = 208/260 (80%) Strand = Plus / Minus Query: 219 gcgtagccagggtacgcgccgttgccgaagactcctgggcaggcggtggcggcctccagc 278 ||||| || |||||||| || |||||| | ||||| | ||| |||||||||||||||||| Sbjct: 31830 gcgtaacccgggtacgcccccttgccgtacactccggcgcacgcggtggcggcctccagc 31771 Query: 279 ggcgcgtcgctgctgccctggtaatacccgtcgccgaacgggttggtcgccgcgccggcg 338 ||||||||| | ||||||| | | |||| ||||||||||||||| | | |||| || Sbjct: 31770 ggcgcgtcggcgtcgccctggaagaagccgttgccgaacgggttggtgacggtgccgacg 31711 Query: 339 agcatgctcgcgaggttcatgaccatggcgtcggccccaacgtcgccgttgggcgccacg 398 | ||| |||||| || |||||| ||||| | || |||||||||||||||| | | Sbjct: 31710 atcatcgaggcgagggatatcaccatgccgtcgacgccgacgtcgccgttgggcggcgtg 31651 Query: 399 aggggcgcgtcctgggggccgtaggtgggctggtggaagggccacgcgcacgcgccgggg 458 |||||||| |||| |||||||| ||||||||| | |||||||||||| ||||||| Sbjct: 31650 aggggcgccgcctgcgggccgtacaccggctggtggtacggccacgcgcactggccgggg 31591 Query: 459 cactgcgtctccgggttgcc 478 ||||| ||| |||||||||| Sbjct: 31590 cactgggtcgccgggttgcc 31571 Score = 54.0 bits (27), Expect = 4e-04 Identities = 137/171 (80%), Gaps = 2/171 (1%) Strand = Plus / Plus Query: 228 gggtacgcgccgttgccgaagactcctgggcaggcggtggcggcctccagcggcgcgtcg 287 |||||||||||| ||||| ||||||| ||||| || | | ||||||||||||||||| Sbjct: 3856 gggtacgcgccgctgccgtagactcccgggcacgccgagcacgcctccagcggcgcgtc- 3914 Query: 288 ctgctgccc-tggtaatacccgtcgccgaacgggttggtcgccgcgccggcgagcatgct 346 ||| |||| ||||| |||| |||||| ||||||||||| ||| |||||| | ||| Sbjct: 3915 ctggggcccctggtagaacccatcgccgtacgggttggtcaccgtgccggccaccatcga 3974 Query: 347 cgcgaggttcatgaccatggcgtcggccccaacgtcgccgttgggcgccac 397 |||||| |||| ||||| |||| || || |||||| |||||||||||| Sbjct: 3975 ggcgaggatcatcaccatcccgtccgcgccgacgtcgttgttgggcgccac 4025
>dbj|AP005012.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0627E03 Length = 159861 Score = 351 bits (177), Expect = 1e-93 Identities = 315/361 (87%) Strand = Plus / Plus Query: 120 gtggaagggtcgtaaagcgcaggaagcaagtacttcctgccatgcgcgccattacaattg 179 ||||| |||| ||| ||||| ||||||| ||| ||||| || | ||||||||| || Sbjct: 149609 gtggaggggttgtagagcgcgggaagcaggtatttcctcccgttcgcgccattggcgtta 149668 Query: 180 tagctcgccccggtggcctggtccactttgaggtcgccggcgtagccagggtacgcgccg 239 ||||| |||||||| ||||| ||||| || || || |||||| | ||||||||||||||| Sbjct: 149669 tagcttgccccggtcgcctgatccaccttcagctcaccggcgaatccagggtacgcgccg 149728 Query: 240 ttgccgaagactcctgggcaggcggtggcggcctccagcggcgcgtcgctgctgccctgg 299 | ||||||||||| ||||| || ||||||||||||||||||||||| |||||||||||| Sbjct: 149729 ctcccgaagactcccgggcacgccgtggcggcctccagcggcgcgtccctgctgccctgg 149788 Query: 300 taatacccgtcgccgaacgggttggtcgccgcgccggcgagcatgctcgcgaggttcatg 359 || |||||||||||||||||||||||| ||| ||||||||||||||| ||||||||||| Sbjct: 149789 tagtacccgtcgccgaacgggttggtcaccgtgccggcgagcatgctggcgaggttcatc 149848 Query: 360 accatggcgtcggccccaacgtcgccgttgggcgccacgaggggcgcgtcctgggggccg 419 |||||| |||| ||||| | ||||||||||||||||||||| |||||| |||| |||||| Sbjct: 149849 accatgccgtccgccccgatgtcgccgttgggcgccacgagcggcgcgccctgcgggccg 149908 Query: 420 taggtgggctggtggaagggccacgcgcacgcgccggggcactgcgtctccgggttgccg 479 || ||||||||||||| |||||||||||| ||||||||||||||||| ||||||||||| Sbjct: 149909 tacatgggctggtggaacggccacgcgcactcgccggggcactgcgtcgccgggttgccg 149968 Query: 480 a 480 | Sbjct: 149969 a 149969 Score = 111 bits (56), Expect = 2e-21 Identities = 196/240 (81%), Gaps = 2/240 (0%) Strand = Plus / Plus Query: 228 gggtacgcgccgttgccgaagactcctgggcaggcggtggcggcctccagcggcgcgtcg 287 |||||||| ||| ||||| |||| || || || || || ||||||||||||||||| || Sbjct: 155132 gggtacgcaccgctgccgtagacccccggacacgccgtcgcggcctccagcggcgcctcc 155191 Query: 288 ctgctgccctggtaatacccgtcgccgaacgggttggtcgccgcgccggcgagcatgctc 347 || ||||||||| ||||||||||||||||||||||| | ||||||||| |||||| Sbjct: 155192 ttggggccctggtagaacccgtcgccgaacgggttggtcacgacgccggcgaccatgctg 155251 Query: 348 gcgaggttcatgaccatggcgtcggccccaacgtcgccgttgggcgccacgaggggc-gc 406 |||| |||||| |||||| |||| ||| ||||||||| |||||| ||| || | | || Sbjct: 155252 gcgatgttcatcaccatgccgtccatcccgacgtcgccgctgggcggcaccagcgccggc 155311 Query: 407 gtcctgggggccgtaggtgggctggtggaagggccacgcgcacgcgccggggcactgcgt 466 || ||| || ||||| ||||||||||| |||||||||||| ||||||||||||||| Sbjct: 155312 gt-ctgaggcccgtacaccggctggtggaacggccacgcgcactggccggggcactgcgt 155370 Score = 54.0 bits (27), Expect = 4e-04 Identities = 137/171 (80%), Gaps = 2/171 (1%) Strand = Plus / Plus Query: 228 gggtacgcgccgttgccgaagactcctgggcaggcggtggcggcctccagcggcgcgtcg 287 |||||||||||| ||||| ||||||| ||||| || | | ||||||||||||||||| Sbjct: 138653 gggtacgcgccgctgccgtagactcccgggcacgccgagcacgcctccagcggcgcgtc- 138711 Query: 288 ctgctgccc-tggtaatacccgtcgccgaacgggttggtcgccgcgccggcgagcatgct 346 ||| |||| ||||| |||| |||||| ||||||||||| ||| |||||| | ||| Sbjct: 138712 ctggggcccctggtagaacccatcgccgtacgggttggtcaccgtgccggccaccatcga 138771 Query: 347 cgcgaggttcatgaccatggcgtcggccccaacgtcgccgttgggcgccac 397 |||||| |||| ||||| |||| || || |||||| |||||||||||| Sbjct: 138772 ggcgaggatcatcaccatcccgtccgcgccgacgtcgttgttgggcgccac 138822
>dbj|AK062900.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-108-F03, full insert sequence Length = 1193 Score = 351 bits (177), Expect = 1e-93 Identities = 315/361 (87%) Strand = Plus / Minus Query: 120 gtggaagggtcgtaaagcgcaggaagcaagtacttcctgccatgcgcgccattacaattg 179 ||||| |||| ||| ||||| ||||||| ||| ||||| || | ||||||||| || Sbjct: 1036 gtggaggggttgtagagcgcgggaagcaggtatttcctcccgttcgcgccattggcgtta 977 Query: 180 tagctcgccccggtggcctggtccactttgaggtcgccggcgtagccagggtacgcgccg 239 ||||| |||||||| ||||| ||||| || || || |||||| | ||||||||||||||| Sbjct: 976 tagcttgccccggtcgcctgatccaccttcagctcaccggcgaatccagggtacgcgccg 917 Query: 240 ttgccgaagactcctgggcaggcggtggcggcctccagcggcgcgtcgctgctgccctgg 299 | ||||||||||| ||||| || ||||||||||||||||||||||| |||||||||||| Sbjct: 916 ctcccgaagactcccgggcacgccgtggcggcctccagcggcgcgtccctgctgccctgg 857 Query: 300 taatacccgtcgccgaacgggttggtcgccgcgccggcgagcatgctcgcgaggttcatg 359 || |||||||||||||||||||||||| ||| ||||||||||||||| ||||||||||| Sbjct: 856 tagtacccgtcgccgaacgggttggtcaccgtgccggcgagcatgctggcgaggttcatc 797 Query: 360 accatggcgtcggccccaacgtcgccgttgggcgccacgaggggcgcgtcctgggggccg 419 |||||| |||| ||||| | ||||||||||||||||||||| |||||| |||| |||||| Sbjct: 796 accatgccgtccgccccgatgtcgccgttgggcgccacgagcggcgcgccctgcgggccg 737 Query: 420 taggtgggctggtggaagggccacgcgcacgcgccggggcactgcgtctccgggttgccg 479 || ||||||||||||| |||||||||||| ||||||||||||||||| ||||||||||| Sbjct: 736 tacatgggctggtggaacggccacgcgcactcgccggggcactgcgtcgccgggttgccg 677 Query: 480 a 480 | Sbjct: 676 a 676
>ref|XM_467877.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1222 Score = 111 bits (56), Expect = 2e-21 Identities = 196/240 (81%), Gaps = 2/240 (0%) Strand = Plus / Minus Query: 228 gggtacgcgccgttgccgaagactcctgggcaggcggtggcggcctccagcggcgcgtcg 287 |||||||| ||| ||||| |||| || || || || || ||||||||||||||||| || Sbjct: 928 gggtacgcaccgctgccgtagacccccggacacgccgtcgcggcctccagcggcgcctcc 869 Query: 288 ctgctgccctggtaatacccgtcgccgaacgggttggtcgccgcgccggcgagcatgctc 347 || ||||||||| ||||||||||||||||||||||| | ||||||||| |||||| Sbjct: 868 ttggggccctggtagaacccgtcgccgaacgggttggtcacgacgccggcgaccatgctg 809 Query: 348 gcgaggttcatgaccatggcgtcggccccaacgtcgccgttgggcgccacgaggggc-gc 406 |||| |||||| |||||| |||| ||| ||||||||| |||||| ||| || | | || Sbjct: 808 gcgatgttcatcaccatgccgtccatcccgacgtcgccgctgggcggcaccagcgccggc 749 Query: 407 gtcctgggggccgtaggtgggctggtggaagggccacgcgcacgcgccggggcactgcgt 466 || ||| || ||||| ||||||||||| |||||||||||| ||||||||||||||| Sbjct: 748 gt-ctgaggcccgtacaccggctggtggaacggccacgcgcactggccggggcactgcgt 690
>dbj|AK063605.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-118-C09, full insert sequence Length = 1222 Score = 111 bits (56), Expect = 2e-21 Identities = 196/240 (81%), Gaps = 2/240 (0%) Strand = Plus / Minus Query: 228 gggtacgcgccgttgccgaagactcctgggcaggcggtggcggcctccagcggcgcgtcg 287 |||||||| ||| ||||| |||| || || || || || ||||||||||||||||| || Sbjct: 928 gggtacgcaccgctgccgtagacccccggacacgccgtcgcggcctccagcggcgcctcc 869 Query: 288 ctgctgccctggtaatacccgtcgccgaacgggttggtcgccgcgccggcgagcatgctc 347 || ||||||||| ||||||||||||||||||||||| | ||||||||| |||||| Sbjct: 868 ttggggccctggtagaacccgtcgccgaacgggttggtcacgacgccggcgaccatgctg 809 Query: 348 gcgaggttcatgaccatggcgtcggccccaacgtcgccgttgggcgccacgaggggc-gc 406 |||| |||||| |||||| |||| ||| ||||||||| |||||| ||| || | | || Sbjct: 808 gcgatgttcatcaccatgccgtccatcccgacgtcgccgctgggcggcaccagcgccggc 749 Query: 407 gtcctgggggccgtaggtgggctggtggaagggccacgcgcacgcgccggggcactgcgt 466 || ||| || ||||| ||||||||||| |||||||||||| ||||||||||||||| Sbjct: 748 gt-ctgaggcccgtacaccggctggtggaacggccacgcgcactggccggggcactgcgt 690
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 109 bits (55), Expect = 8e-21 Identities = 243/303 (80%), Gaps = 2/303 (0%) Strand = Plus / Plus Query: 177 ttgtagctcgccccggtggcctggtccactttgaggtcgccggcgtagccagggtacgcg 236 |||||||| || |||||||||| |||||| || ||||||||||||| ||||||||| Sbjct: 6191344 ttgtagctggcgccggtggccttgtccaccagcagcgcgccggcgtagcccgggtacgcg 6191403 Query: 237 ccgttgccgaagactcctgggcaggcggtggcggcctccagcggcgcgtcgctgctgccc 296 || |||||| | || || | ||| || || ||||||||||||| |||| ||| ||| ||| Sbjct: 6191404 cccttgccgtacacgcccgtgcacgccgtcgcggcctccagcgccgcgccgc-gctcccc 6191462 Query: 297 -tggtaatacccgtcgccgaacgggttggtcgccgcgccggcgagcatgctcgcgaggtt 355 ||||| ||||||||||||||||||||||| |||||||||| | |||||| || | ||| Sbjct: 6191463 ctggtagaacccgtcgccgaacgggttggtcaccgcgccggccaccatgctggccacgtt 6191522 Query: 356 catgaccatggcgtcggccccaacgtcgccgttgggcgccacgaggggcgcgtcctgggg 415 || ||||| |||| || ||||||||| |||| | ||| || ||||| ||||||| Sbjct: 6191523 gatcaccatcccgtccatgcccacgtcgccgctgggtggcaccagcggcgccgcctgggg 6191582 Query: 416 gccgtaggtgggctggtggaagggccacgcgcacgcgccggggcactgcgtctccgggtt 475 ||||| ||||||||||| |||||||||||| || |||||||||||| ||| ||| Sbjct: 6191583 accgtacaccggctggtggaacggccacgcgcactgccccgggcactgcgtcgccgagtt 6191642 Query: 476 gcc 478 ||| Sbjct: 6191643 gcc 6191645 Score = 105 bits (53), Expect = 1e-19 Identities = 214/265 (80%), Gaps = 2/265 (0%) Strand = Plus / Plus Query: 215 gccggcgtagccagggtacgcgccgttgccgaagactcctgggcaggcggtggcggcctc 274 ||||| |||||| ||| | |||||| |||||||||| || | ||| || ||||||||||| Sbjct: 6189083 gccggggtagccggggaaggcgccgctgccgaagacgccggcgcacgccgtggcggcctc 6189142 Query: 275 cagcggcgcgtcgctgctgccctggtaatacccgtcgccgaacgggttggtcgccgcgcc 334 || | ||| || | ||||||||| |||||||||||||| ||||| ||| ||| ||| Sbjct: 6189143 catcccggcgccggcgtcgccctggtagtacccgtcgccgaaggggttcgtcaccgtgcc 6189202 Query: 335 ggcgagcatgctc-gcgaggttcatgaccatggcgtcggccccaacgtcgccgttgggcg 393 |||||| | || | |||||| | ||||||||| |||| | || |||||||||||||||| Sbjct: 6189203 ggcgagga-gcgcggcgaggctgatgaccatgccgtccacgccgacgtcgccgttgggcg 6189261 Query: 394 ccacgaggggcgcgtcctgggggccgtaggtgggctggtggaagggccacgcgcacgcgc 453 |||||| |||| ||||||| ||||| ||||||||||| |||||||||||| || Sbjct: 6189262 gcacgagcggcggcgcctggggcccgtacaccggctggtggaacggccacgcgcactggc 6189321 Query: 454 cggggcactgcgtctccgggttgcc 478 ||||||||||| | |||||||||| Sbjct: 6189322 cggggcactgctgcgccgggttgcc 6189346 Score = 67.9 bits (34), Expect = 3e-08 Identities = 85/102 (83%) Strand = Plus / Minus Query: 293 gccctggtaatacccgtcgccgaacgggttggtcgccgcgccggcgagcatgctcgcgag 352 ||||||||| || |||||||||||||||||||| |||||||||| ||| |||| ||||| Sbjct: 6203112 gccctggtagtaggcgtcgccgaacgggttggtcaccgcgccggccagcgtgctggcgag 6203053 Query: 353 gttcatgaccatggcgtcggccccaacgtcgccgttgggcgc 394 ||| |||||| |||| | || ||||||||||| ||||| Sbjct: 6203052 cgtcaccaccatgccgtccgttcccacgtcgccgttcggcgc 6203011 Score = 56.0 bits (28), Expect = 1e-04 Identities = 73/88 (82%) Strand = Plus / Minus Query: 306 ccgtcgccgaacgggttggtcgccgcgccggcgagcatgctcgcgaggttcatgaccatg 365 ||||||||||||||||||||| | |||||||| |||| || ||||| || |||| | Sbjct: 6211074 ccgtcgccgaacgggttggtcacggcgccggccagcacgccggcgagcgtcgccaccacg 6211015 Query: 366 gcgtcggccccaacgtcgccgttgggcg 393 |||| ||||| |||||||||||||||| Sbjct: 6211014 ccgtccgccccgacgtcgccgttgggcg 6210987
>dbj|AP003488.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0436F11 Length = 165550 Score = 109 bits (55), Expect = 8e-21 Identities = 243/303 (80%), Gaps = 2/303 (0%) Strand = Plus / Plus Query: 177 ttgtagctcgccccggtggcctggtccactttgaggtcgccggcgtagccagggtacgcg 236 |||||||| || |||||||||| |||||| || ||||||||||||| ||||||||| Sbjct: 105163 ttgtagctggcgccggtggccttgtccaccagcagcgcgccggcgtagcccgggtacgcg 105222 Query: 237 ccgttgccgaagactcctgggcaggcggtggcggcctccagcggcgcgtcgctgctgccc 296 || |||||| | || || | ||| || || ||||||||||||| |||| ||| ||| ||| Sbjct: 105223 cccttgccgtacacgcccgtgcacgccgtcgcggcctccagcgccgcgccgc-gctcccc 105281 Query: 297 -tggtaatacccgtcgccgaacgggttggtcgccgcgccggcgagcatgctcgcgaggtt 355 ||||| ||||||||||||||||||||||| |||||||||| | |||||| || | ||| Sbjct: 105282 ctggtagaacccgtcgccgaacgggttggtcaccgcgccggccaccatgctggccacgtt 105341 Query: 356 catgaccatggcgtcggccccaacgtcgccgttgggcgccacgaggggcgcgtcctgggg 415 || ||||| |||| || ||||||||| |||| | ||| || ||||| ||||||| Sbjct: 105342 gatcaccatcccgtccatgcccacgtcgccgctgggtggcaccagcggcgccgcctgggg 105401 Query: 416 gccgtaggtgggctggtggaagggccacgcgcacgcgccggggcactgcgtctccgggtt 475 ||||| ||||||||||| |||||||||||| || |||||||||||| ||| ||| Sbjct: 105402 accgtacaccggctggtggaacggccacgcgcactgccccgggcactgcgtcgccgagtt 105461 Query: 476 gcc 478 ||| Sbjct: 105462 gcc 105464 Score = 105 bits (53), Expect = 1e-19 Identities = 214/265 (80%), Gaps = 2/265 (0%) Strand = Plus / Plus Query: 215 gccggcgtagccagggtacgcgccgttgccgaagactcctgggcaggcggtggcggcctc 274 ||||| |||||| ||| | |||||| |||||||||| || | ||| || ||||||||||| Sbjct: 102902 gccggggtagccggggaaggcgccgctgccgaagacgccggcgcacgccgtggcggcctc 102961 Query: 275 cagcggcgcgtcgctgctgccctggtaatacccgtcgccgaacgggttggtcgccgcgcc 334 || | ||| || | ||||||||| |||||||||||||| ||||| ||| ||| ||| Sbjct: 102962 catcccggcgccggcgtcgccctggtagtacccgtcgccgaaggggttcgtcaccgtgcc 103021 Query: 335 ggcgagcatgctc-gcgaggttcatgaccatggcgtcggccccaacgtcgccgttgggcg 393 |||||| | || | |||||| | ||||||||| |||| | || |||||||||||||||| Sbjct: 103022 ggcgagga-gcgcggcgaggctgatgaccatgccgtccacgccgacgtcgccgttgggcg 103080 Query: 394 ccacgaggggcgcgtcctgggggccgtaggtgggctggtggaagggccacgcgcacgcgc 453 |||||| |||| ||||||| ||||| ||||||||||| |||||||||||| || Sbjct: 103081 gcacgagcggcggcgcctggggcccgtacaccggctggtggaacggccacgcgcactggc 103140 Query: 454 cggggcactgcgtctccgggttgcc 478 ||||||||||| | |||||||||| Sbjct: 103141 cggggcactgctgcgccgggttgcc 103165 Score = 67.9 bits (34), Expect = 3e-08 Identities = 85/102 (83%) Strand = Plus / Minus Query: 293 gccctggtaatacccgtcgccgaacgggttggtcgccgcgccggcgagcatgctcgcgag 352 ||||||||| || |||||||||||||||||||| |||||||||| ||| |||| ||||| Sbjct: 116931 gccctggtagtaggcgtcgccgaacgggttggtcaccgcgccggccagcgtgctggcgag 116872 Query: 353 gttcatgaccatggcgtcggccccaacgtcgccgttgggcgc 394 ||| |||||| |||| | || ||||||||||| ||||| Sbjct: 116871 cgtcaccaccatgccgtccgttcccacgtcgccgttcggcgc 116830 Score = 56.0 bits (28), Expect = 1e-04 Identities = 73/88 (82%) Strand = Plus / Minus Query: 306 ccgtcgccgaacgggttggtcgccgcgccggcgagcatgctcgcgaggttcatgaccatg 365 ||||||||||||||||||||| | |||||||| |||| || ||||| || |||| | Sbjct: 124893 ccgtcgccgaacgggttggtcacggcgccggccagcacgccggcgagcgtcgccaccacg 124834 Query: 366 gcgtcggccccaacgtcgccgttgggcg 393 |||| ||||| |||||||||||||||| Sbjct: 124833 ccgtccgccccgacgtcgccgttgggcg 124806
>dbj|AK061401.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-305-G10, full insert sequence Length = 962 Score = 109 bits (55), Expect = 8e-21 Identities = 243/303 (80%), Gaps = 2/303 (0%) Strand = Plus / Minus Query: 177 ttgtagctcgccccggtggcctggtccactttgaggtcgccggcgtagccagggtacgcg 236 |||||||| || |||||||||| |||||| || ||||||||||||| ||||||||| Sbjct: 770 ttgtagctggcgccggtggccttgtccaccagcagcgcgccggcgtagcccgggtacgcg 711 Query: 237 ccgttgccgaagactcctgggcaggcggtggcggcctccagcggcgcgtcgctgctgccc 296 || |||||| | || || | ||| || || ||||||||||||| |||| ||| ||| ||| Sbjct: 710 cccttgccgtacacgcccgtgcacgccgtcgcggcctccagcgccgcgccgc-gctcccc 652 Query: 297 -tggtaatacccgtcgccgaacgggttggtcgccgcgccggcgagcatgctcgcgaggtt 355 ||||| ||||||||||||||||||||||| |||||||||| | |||||| || | ||| Sbjct: 651 ctggtagaacccgtcgccgaacgggttggtcaccgcgccggccaccatgctggccacgtt 592 Query: 356 catgaccatggcgtcggccccaacgtcgccgttgggcgccacgaggggcgcgtcctgggg 415 || ||||| |||| || ||||||||| |||| | ||| || ||||| ||||||| Sbjct: 591 gatcaccatcccgtccatgcccacgtcgccgctgggtggcaccagcggcgccgcctgggg 532 Query: 416 gccgtaggtgggctggtggaagggccacgcgcacgcgccggggcactgcgtctccgggtt 475 ||||| ||||||||||| |||||||||||| || |||||||||||| ||| ||| Sbjct: 531 accgtacaccggctggtggaacggccacgcgcactgccccgggcactgcgtcgccgagtt 472 Query: 476 gcc 478 ||| Sbjct: 471 gcc 469
>gb|AF325723.1|AF325723 Pennisetum ciliare phosphate-induced protein 1-like protein mRNA, complete cds Length = 1160 Score = 107 bits (54), Expect = 3e-20 Identities = 209/260 (80%), Gaps = 3/260 (1%) Strand = Plus / Minus Query: 219 gcgtagccagggtacgcgccgttgccgaagactcctgggcaggcggtggcggcctccagc 278 |||||||| ||||||||||| |||||| | || || | ||| || ||||||||||||||| Sbjct: 905 gcgtagccggggtacgcgcccttgccgtacacgccggcgcacgccgtggcggcctccagc 846 Query: 279 ggcgcgtcgctgctgccct---ggtaatacccgtcgccgaacgggttggtcgccgcgccg 335 ||||||||| | ||||| |||| |||||| |||||||||||||||| ||| |||| Sbjct: 845 ggcgcgtcggcggagccctcctggtagaacccgttgccgaacgggttggtcaccgtgccg 786 Query: 336 gcgagcatgctcgcgaggttcatgaccatggcgtcggccccaacgtcgccgttgggcgcc 395 ||| |||| ||| || || ||||| ||||||| || ||||| |||||||||| Sbjct: 785 acgatcatggacgccagcgagatcaccatcccgtcggcaccgacgtcaccgttgggcggg 726 Query: 396 acgaggggcgcgtcctgggggccgtaggtgggctggtggaagggccacgcgcacgcgccg 455 ||| ||||| |||| |||||||| |||||||||||| |||||||||||| |||| Sbjct: 725 gtgagcggcgccgcctgcgggccgtacacgggctggtggaacggccacgcgcactggccg 666 Query: 456 gggcactgcgtctccgggtt 475 |||||||||||| ||||||| Sbjct: 665 gggcactgcgtcgccgggtt 646
>dbj|AK058704.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-019-C08, full insert sequence Length = 1268 Score = 105 bits (53), Expect = 1e-19 Identities = 214/265 (80%), Gaps = 2/265 (0%) Strand = Plus / Minus Query: 215 gccggcgtagccagggtacgcgccgttgccgaagactcctgggcaggcggtggcggcctc 274 ||||| |||||| ||| | |||||| |||||||||| || | ||| || ||||||||||| Sbjct: 898 gccggggtagccggggaaggcgccgctgccgaagacgccggcgcacgccgtggcggcctc 839 Query: 275 cagcggcgcgtcgctgctgccctggtaatacccgtcgccgaacgggttggtcgccgcgcc 334 || | ||| || | ||||||||| |||||||||||||| ||||| ||| ||| ||| Sbjct: 838 catcccggcgccggcgtcgccctggtagtacccgtcgccgaaggggttcgtcaccgtgcc 779 Query: 335 ggcgagcatgctc-gcgaggttcatgaccatggcgtcggccccaacgtcgccgttgggcg 393 |||||| | || | |||||| | ||||||||| |||| | || |||||||||||||||| Sbjct: 778 ggcgagga-gcgcggcgaggctgatgaccatgccgtccacgccgacgtcgccgttgggcg 720 Query: 394 ccacgaggggcgcgtcctgggggccgtaggtgggctggtggaagggccacgcgcacgcgc 453 |||||| |||| ||||||| ||||| ||||||||||| |||||||||||| || Sbjct: 719 gcacgagcggcggcgcctggggcccgtacaccggctggtggaacggccacgcgcactggc 660 Query: 454 cggggcactgcgtctccgggttgcc 478 ||||||||||| | |||||||||| Sbjct: 659 cggggcactgctgcgccgggttgcc 635
>gb|AY105815.1| Zea mays PCO102946 mRNA sequence Length = 1238 Score = 105 bits (53), Expect = 1e-19 Identities = 146/177 (82%) Strand = Plus / Minus Query: 304 acccgtcgccgaacgggttggtcgccgcgccggcgagcatgctcgcgaggttcatgacca 363 |||||| ||||||||||||||| ||| |||| |||||||| ||| || ||||||| Sbjct: 821 acccgttgccgaacgggttggtgaccgtgccgacgagcatggacgccagcgagatgacca 762 Query: 364 tggcgtcggccccaacgtcgccgttgggcgccacgaggggcgcgtcctgggggccgtagg 423 || ||||| ||||||||||||||||||||| ||| ||||| |||| |||||||| Sbjct: 761 tgccgtcgaccccaacgtcgccgttgggcggggtgagcggcgccgcctgcgggccgtaca 702 Query: 424 tgggctggtggaagggccacgcgcacgcgccggggcactgcgtctccgggttgccga 480 |||||||||||| |||||||||||| ||||||||||||| | |||||||||||| Sbjct: 701 cgggctggtggaacggccacgcgcactgcccggggcactgcgacgccgggttgccga 645 Score = 65.9 bits (33), Expect = 1e-07 Identities = 60/69 (86%) Strand = Plus / Minus Query: 219 gcgtagccagggtacgcgccgttgccgaagactcctgggcaggcggtggcggcctccagc 278 |||||||| ||||||||||| |||||| | || || | ||| || ||||||||||||||| Sbjct: 912 gcgtagccggggtacgcgcccttgccgtacacgccggcgcacgccgtggcggcctccagc 853 Query: 279 ggcgcgtcg 287 ||||||||| Sbjct: 852 ggcgcgtcg 844
>ref|XM_467879.1| Oryza sativa (japonica cultivar-group), mRNA Length = 936 Score = 103 bits (52), Expect = 5e-19 Identities = 208/260 (80%) Strand = Plus / Minus Query: 219 gcgtagccagggtacgcgccgttgccgaagactcctgggcaggcggtggcggcctccagc 278 ||||| || |||||||| || |||||| | ||||| | ||| |||||||||||||||||| Sbjct: 812 gcgtaacccgggtacgcccccttgccgtacactccggcgcacgcggtggcggcctccagc 753 Query: 279 ggcgcgtcgctgctgccctggtaatacccgtcgccgaacgggttggtcgccgcgccggcg 338 ||||||||| | ||||||| | | |||| ||||||||||||||| | | |||| || Sbjct: 752 ggcgcgtcggcgtcgccctggaagaagccgttgccgaacgggttggtgacggtgccgacg 693 Query: 339 agcatgctcgcgaggttcatgaccatggcgtcggccccaacgtcgccgttgggcgccacg 398 | ||| |||||| || |||||| ||||| | || |||||||||||||||| | | Sbjct: 692 atcatcgaggcgagggatatcaccatgccgtcgacgccgacgtcgccgttgggcggcgtg 633 Query: 399 aggggcgcgtcctgggggccgtaggtgggctggtggaagggccacgcgcacgcgccgggg 458 |||||||| |||| |||||||| ||||||||| | |||||||||||| ||||||| Sbjct: 632 aggggcgccgcctgcgggccgtacaccggctggtggtacggccacgcgcactggccgggg 573 Query: 459 cactgcgtctccgggttgcc 478 ||||| ||| |||||||||| Sbjct: 572 cactgggtcgccgggttgcc 553
>dbj|AK070419.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023049J22, full insert sequence Length = 1187 Score = 103 bits (52), Expect = 5e-19 Identities = 208/260 (80%) Strand = Plus / Minus Query: 219 gcgtagccagggtacgcgccgttgccgaagactcctgggcaggcggtggcggcctccagc 278 ||||| || |||||||| || |||||| | ||||| | ||| |||||||||||||||||| Sbjct: 877 gcgtaacccgggtacgcccccttgccgtacactccggcgcacgcggtggcggcctccagc 818 Query: 279 ggcgcgtcgctgctgccctggtaatacccgtcgccgaacgggttggtcgccgcgccggcg 338 ||||||||| | ||||||| | | |||| ||||||||||||||| | | |||| || Sbjct: 817 ggcgcgtcggcgtcgccctggaagaagccgttgccgaacgggttggtgacggtgccgacg 758 Query: 339 agcatgctcgcgaggttcatgaccatggcgtcggccccaacgtcgccgttgggcgccacg 398 | ||| |||||| || |||||| ||||| | || |||||||||||||||| | | Sbjct: 757 atcatcgaggcgagggatatcaccatgccgtcgacgccgacgtcgccgttgggcggcgtg 698 Query: 399 aggggcgcgtcctgggggccgtaggtgggctggtggaagggccacgcgcacgcgccgggg 458 |||||||| |||| |||||||| ||||||||| | |||||||||||| ||||||| Sbjct: 697 aggggcgccgcctgcgggccgtacaccggctggtggtacggccacgcgcactggccgggg 638 Query: 459 cactgcgtctccgggttgcc 478 ||||| ||| |||||||||| Sbjct: 637 cactgggtcgccgggttgcc 618
>dbj|AK099621.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013053E02, full insert sequence Length = 837 Score = 101 bits (51), Expect = 2e-18 Identities = 242/303 (79%), Gaps = 2/303 (0%) Strand = Plus / Plus Query: 177 ttgtagctcgccccggtggcctggtccactttgaggtcgccggcgtagccagggtacgcg 236 |||||||| || |||||||||| |||||| || ||||||| ||||| ||||||||| Sbjct: 121 ttgtagctggcgccggtggccttgtccaccagcagcgcgccggcctagcccgggtacgcg 180 Query: 237 ccgttgccgaagactcctgggcaggcggtggcggcctccagcggcgcgtcgctgctgccc 296 || |||||| | || || | ||| || || ||||||||||||| |||| ||| ||| ||| Sbjct: 181 cccttgccgtacacgcccgtgcacgccgtcgcggcctccagcgccgcgccgc-gctcccc 239 Query: 297 -tggtaatacccgtcgccgaacgggttggtcgccgcgccggcgagcatgctcgcgaggtt 355 ||||| ||||||||||||||||||||||| |||||||||| | |||||| || | ||| Sbjct: 240 ctggtagaacccgtcgccgaacgggttggtcaccgcgccggccaccatgctggccacgtt 299 Query: 356 catgaccatggcgtcggccccaacgtcgccgttgggcgccacgaggggcgcgtcctgggg 415 || ||||| |||| || ||||||||| |||| | ||| || ||||| ||||||| Sbjct: 300 gatcaccatcccgtccatgcccacgtcgccgctgggtggcaccagcggcgccgcctgggg 359 Query: 416 gccgtaggtgggctggtggaagggccacgcgcacgcgccggggcactgcgtctccgggtt 475 ||||| ||||||||||| |||||||||||| || |||||||||||| ||| ||| Sbjct: 360 accgtacaccggctggtggaacggccacgcgcactgccccgggcactgcgtcgccgagtt 419 Query: 476 gcc 478 ||| Sbjct: 420 gcc 422
>ref|XM_483034.1| Oryza sativa (japonica cultivar-group), mRNA Length = 924 Score = 77.8 bits (39), Expect = 3e-11 Identities = 156/195 (80%) Strand = Plus / Minus Query: 270 gcctccagcggcgcgtcgctgctgccctggtaatacccgtcgccgaacgggttggtcgcc 329 |||||||||||||| ||| || ||||||| | |||||| ||||| ||||||| ||| || Sbjct: 540 gcctccagcggcgcctcggtggggccctggaagtacccgccgccgtacgggttcgtcacc 481 Query: 330 gcgccggcgagcatgctcgcgaggttcatgaccatggcgtcggccccaacgtcgccgttg 389 || |||||||||| | |||||||| |||| ||| |||| ||| |||||| |||| Sbjct: 480 gccccggcgagcagcgtggcgaggttgatgatgatgccgtccatccccacgtcggcgttc 421 Query: 390 ggcgccacgaggggcgcgtcctgggggccgtaggtgggctggtggaagggccacgcgcac 449 |||| ||| || |||| |||| |||||||| | ||||||||||| |||||||||||| Sbjct: 420 ggcgacaccagcggcggcgcctgagggccgtacgccggctggtggaacggccacgcgcac 361 Query: 450 gcgccggggcactgc 464 | || ||||||||| Sbjct: 360 tcccccgggcactgc 346
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 77.8 bits (39), Expect = 3e-11 Identities = 156/195 (80%) Strand = Plus / Plus Query: 270 gcctccagcggcgcgtcgctgctgccctggtaatacccgtcgccgaacgggttggtcgcc 329 |||||||||||||| ||| || ||||||| | |||||| ||||| ||||||| ||| || Sbjct: 23962549 gcctccagcggcgcctcggtggggccctggaagtacccgccgccgtacgggttcgtcacc 23962608 Query: 330 gcgccggcgagcatgctcgcgaggttcatgaccatggcgtcggccccaacgtcgccgttg 389 || |||||||||| | |||||||| |||| ||| |||| ||| |||||| |||| Sbjct: 23962609 gccccggcgagcagcgtggcgaggttgatgatgatgccgtccatccccacgtcggcgttc 23962668 Query: 390 ggcgccacgaggggcgcgtcctgggggccgtaggtgggctggtggaagggccacgcgcac 449 |||| ||| || |||| |||| |||||||| | ||||||||||| |||||||||||| Sbjct: 23962669 ggcgacaccagcggcggcgcctgagggccgtacgccggctggtggaacggccacgcgcac 23962728 Query: 450 gcgccggggcactgc 464 | || ||||||||| Sbjct: 23962729 tcccccgggcactgc 23962743
>dbj|AP005918.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0419H09 Length = 143533 Score = 77.8 bits (39), Expect = 3e-11 Identities = 156/195 (80%) Strand = Plus / Plus Query: 270 gcctccagcggcgcgtcgctgctgccctggtaatacccgtcgccgaacgggttggtcgcc 329 |||||||||||||| ||| || ||||||| | |||||| ||||| ||||||| ||| || Sbjct: 95700 gcctccagcggcgcctcggtggggccctggaagtacccgccgccgtacgggttcgtcacc 95759 Query: 330 gcgccggcgagcatgctcgcgaggttcatgaccatggcgtcggccccaacgtcgccgttg 389 || |||||||||| | |||||||| |||| ||| |||| ||| |||||| |||| Sbjct: 95760 gccccggcgagcagcgtggcgaggttgatgatgatgccgtccatccccacgtcggcgttc 95819 Query: 390 ggcgccacgaggggcgcgtcctgggggccgtaggtgggctggtggaagggccacgcgcac 449 |||| ||| || |||| |||| |||||||| | ||||||||||| |||||||||||| Sbjct: 95820 ggcgacaccagcggcggcgcctgagggccgtacgccggctggtggaacggccacgcgcac 95879 Query: 450 gcgccggggcactgc 464 | || ||||||||| Sbjct: 95880 tcccccgggcactgc 95894
>dbj|AK073011.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023145I01, full insert sequence Length = 922 Score = 61.9 bits (31), Expect = 2e-06 Identities = 154/195 (78%) Strand = Plus / Minus Query: 270 gcctccagcggcgcgtcgctgctgccctggtaatacccgtcgccgaacgggttggtcgcc 329 |||||||||||||| ||| || ||||||| | |||||| ||||| ||||||| ||| || Sbjct: 538 gcctccagcggcgcctcggtggggccctggaagtacccgccgccgtacgggttcgtcacc 479 Query: 330 gcgccggcgagcatgctcgcgaggttcatgaccatggcgtcggccccaacgtcgccgttg 389 || |||||||||| | |||||| | |||| ||| |||| | | |||||| |||| Sbjct: 478 gccccggcgagcagcgtggcgaggctgatgatgatgccgtccatcaccacgtcggcgttc 419 Query: 390 ggcgccacgaggggcgcgtcctgggggccgtaggtgggctggtggaagggccacgcgcac 449 |||| ||| || |||| |||| |||||||| | ||||||||||| |||||||||||| Sbjct: 418 ggcgacaccagcggcggcgcctgagggccgtacgccggctggtggaacggccacgcgcac 359 Query: 450 gcgccggggcactgc 464 | || ||||||||| Sbjct: 358 tcccccgggcactgc 344
>dbj|AP004727.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0516A04 Length = 145107 Score = 56.0 bits (28), Expect = 1e-04 Identities = 73/88 (82%) Strand = Plus / Minus Query: 306 ccgtcgccgaacgggttggtcgccgcgccggcgagcatgctcgcgaggttcatgaccatg 365 ||||||||||||||||||||| | |||||||| |||| || ||||| || |||| | Sbjct: 5150 ccgtcgccgaacgggttggtcacggcgccggccagcacgccggcgagcgtcgccaccacg 5091 Query: 366 gcgtcggccccaacgtcgccgttgggcg 393 |||| ||||| |||||||||||||||| Sbjct: 5090 ccgtccgccccgacgtcgccgttgggcg 5063
>ref|XM_506983.1| PREDICTED Oryza sativa (japonica cultivar-group), P0627E03.37-2 mRNA Length = 1129 Score = 54.0 bits (27), Expect = 4e-04 Identities = 137/171 (80%), Gaps = 2/171 (1%) Strand = Plus / Minus Query: 228 gggtacgcgccgttgccgaagactcctgggcaggcggtggcggcctccagcggcgcgtcg 287 |||||||||||| ||||| ||||||| ||||| || | | ||||||||||||||||| Sbjct: 901 gggtacgcgccgctgccgtagactcccgggcacgccgagcacgcctccagcggcgcgtc- 843 Query: 288 ctgctgccc-tggtaatacccgtcgccgaacgggttggtcgccgcgccggcgagcatgct 346 ||| |||| ||||| |||| |||||| ||||||||||| ||| |||||| | ||| Sbjct: 842 ctggggcccctggtagaacccatcgccgtacgggttggtcaccgtgccggccaccatcga 783 Query: 347 cgcgaggttcatgaccatggcgtcggccccaacgtcgccgttgggcgccac 397 |||||| |||| ||||| |||| || || |||||| |||||||||||| Sbjct: 782 ggcgaggatcatcaccatcccgtccgcgccgacgtcgttgttgggcgccac 732
>ref|XM_467873.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1127 Score = 54.0 bits (27), Expect = 4e-04 Identities = 137/171 (80%), Gaps = 2/171 (1%) Strand = Plus / Minus Query: 228 gggtacgcgccgttgccgaagactcctgggcaggcggtggcggcctccagcggcgcgtcg 287 |||||||||||| ||||| ||||||| ||||| || | | ||||||||||||||||| Sbjct: 899 gggtacgcgccgctgccgtagactcccgggcacgccgagcacgcctccagcggcgcgtc- 841 Query: 288 ctgctgccc-tggtaatacccgtcgccgaacgggttggtcgccgcgccggcgagcatgct 346 ||| |||| ||||| |||| |||||| ||||||||||| ||| |||||| | ||| Sbjct: 840 ctggggcccctggtagaacccatcgccgtacgggttggtcaccgtgccggccaccatcga 781 Query: 347 cgcgaggttcatgaccatggcgtcggccccaacgtcgccgttgggcgccac 397 |||||| |||| ||||| |||| || || |||||| |||||||||||| Sbjct: 780 ggcgaggatcatcaccatcccgtccgcgccgacgtcgttgttgggcgccac 730
>ref|XM_467872.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1110 Score = 54.0 bits (27), Expect = 4e-04 Identities = 137/171 (80%), Gaps = 2/171 (1%) Strand = Plus / Minus Query: 228 gggtacgcgccgttgccgaagactcctgggcaggcggtggcggcctccagcggcgcgtcg 287 |||||||||||| ||||| ||||||| ||||| || | | ||||||||||||||||| Sbjct: 900 gggtacgcgccgctgccgtagactcccgggcacgccgagcacgcctccagcggcgcgtc- 842 Query: 288 ctgctgccc-tggtaatacccgtcgccgaacgggttggtcgccgcgccggcgagcatgct 346 ||| |||| ||||| |||| |||||| ||||||||||| ||| |||||| | ||| Sbjct: 841 ctggggcccctggtagaacccatcgccgtacgggttggtcaccgtgccggccaccatcga 782 Query: 347 cgcgaggttcatgaccatggcgtcggccccaacgtcgccgttgggcgccac 397 |||||| |||| ||||| |||| || || |||||| |||||||||||| Sbjct: 781 ggcgaggatcatcaccatcccgtccgcgccgacgtcgttgttgggcgccac 731
>dbj|AK119695.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-157-C06, full insert sequence Length = 1110 Score = 54.0 bits (27), Expect = 4e-04 Identities = 137/171 (80%), Gaps = 2/171 (1%) Strand = Plus / Minus Query: 228 gggtacgcgccgttgccgaagactcctgggcaggcggtggcggcctccagcggcgcgtcg 287 |||||||||||| ||||| ||||||| ||||| || | | ||||||||||||||||| Sbjct: 900 gggtacgcgccgctgccgtagactcccgggcacgccgagcacgcctccagcggcgcgtc- 842 Query: 288 ctgctgccc-tggtaatacccgtcgccgaacgggttggtcgccgcgccggcgagcatgct 346 ||| |||| ||||| |||| |||||| ||||||||||| ||| |||||| | ||| Sbjct: 841 ctggggcccctggtagaacccatcgccgtacgggttggtcaccgtgccggccaccatcga 782 Query: 347 cgcgaggttcatgaccatggcgtcggccccaacgtcgccgttgggcgccac 397 |||||| |||| ||||| |||| || || |||||| |||||||||||| Sbjct: 781 ggcgaggatcatcaccatcccgtccgcgccgacgtcgttgttgggcgccac 731
>dbj|AK063454.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-115-G05, full insert sequence Length = 1127 Score = 54.0 bits (27), Expect = 4e-04 Identities = 137/171 (80%), Gaps = 2/171 (1%) Strand = Plus / Minus Query: 228 gggtacgcgccgttgccgaagactcctgggcaggcggtggcggcctccagcggcgcgtcg 287 |||||||||||| ||||| ||||||| ||||| || | | ||||||||||||||||| Sbjct: 899 gggtacgcgccgctgccgtagactcccgggcacgccgagcacgcctccagcggcgcgtc- 841 Query: 288 ctgctgccc-tggtaatacccgtcgccgaacgggttggtcgccgcgccggcgagcatgct 346 ||| |||| ||||| |||| |||||| ||||||||||| ||| |||||| | ||| Sbjct: 840 ctggggcccctggtagaacccatcgccgtacgggttggtcaccgtgccggccaccatcga 781 Query: 347 cgcgaggttcatgaccatggcgtcggccccaacgtcgccgttgggcgccac 397 |||||| |||| ||||| |||| || || |||||| |||||||||||| Sbjct: 780 ggcgaggatcatcaccatcccgtccgcgccgacgtcgttgttgggcgccac 730
>ref|NM_196156.1| Oryza sativa (japonica cultivar-group) putative phosphate-induced protein (OSJNBa0095C06.7), mRNA Length = 1005 Score = 46.1 bits (23), Expect = 0.11 Identities = 32/35 (91%) Strand = Plus / Minus Query: 431 gtggaagggccacgcgcacgcgccggggcactgcg 465 |||||| |||||||||||| |||||||||||||| Sbjct: 636 gtggaacggccacgcgcaccggccggggcactgcg 602
>gb|AC079935.3| Genomic sequence for Oryza sativa (japonica cultivar-group) cultivar Nipponbare clone OSJNBa0095C06, from Chromosome 10, complete sequence Length = 156159 Score = 46.1 bits (23), Expect = 0.11 Identities = 32/35 (91%) Strand = Plus / Minus Query: 431 gtggaagggccacgcgcacgcgccggggcactgcg 465 |||||| |||||||||||| |||||||||||||| Sbjct: 58520 gtggaacggccacgcgcaccggccggggcactgcg 58486
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 46.1 bits (23), Expect = 0.11 Identities = 32/35 (91%) Strand = Plus / Minus Query: 431 gtggaagggccacgcgcacgcgccggggcactgcg 465 |||||| |||||||||||| |||||||||||||| Sbjct: 11474527 gtggaacggccacgcgcaccggccggggcactgcg 11474493
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 46.1 bits (23), Expect = 0.11 Identities = 32/35 (91%) Strand = Plus / Minus Query: 431 gtggaagggccacgcgcacgcgccggggcactgcg 465 |||||| |||||||||||| |||||||||||||| Sbjct: 11480967 gtggaacggccacgcgcaccggccggggcactgcg 11480933
>gb|AC048341.22| Homo sapiens 12 BAC RP11-631N16 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 67400 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 47 aacaaaggaaccagaaaattaa 68 |||||||||||||||||||||| Sbjct: 59213 aacaaaggaaccagaaaattaa 59192
>emb|AL732308.7| Human DNA sequence from clone RP11-199F23 on chromosome X, complete sequence Length = 90406 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 51 aaggaaccagaaaattaatgctgga 75 ||||||||||||||||||| ||||| Sbjct: 89928 aaggaaccagaaaattaattctgga 89952
>emb|AL670405.3| Human DNA sequence from clone RP13-148E24 on chromosome X, complete sequence Length = 144353 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 51 aaggaaccagaaaattaatgctgga 75 ||||||||||||||||||| ||||| Sbjct: 1522 aaggaaccagaaaattaattctgga 1546
>dbj|AK101655.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033057F02, full insert sequence Length = 1128 Score = 42.1 bits (21), Expect = 1.6 Identities = 104/129 (80%), Gaps = 2/129 (1%) Strand = Plus / Minus Query: 270 gcctccagcggcgcgtcgctgctgccc-tggtaatacccgtcgccgaacgggttggtcgc 328 ||||||||||||||||| ||| |||| ||||| |||| |||||| ||||||||||| | Sbjct: 859 gcctccagcggcgcgtc-ctggggcccctggtagaacccatcgccgtacgggttggtcac 801 Query: 329 cgcgccggcgagcatgctcgcgaggttcatgaccatggcgtcggccccaacgtcgccgtt 388 || |||||| | ||| |||||| |||| ||||| |||| || || |||||| ||| Sbjct: 800 cgtgccggccaccatcgaggcgaggatcatcaccatcccgtccgcgccgacgtcgttgtt 741 Query: 389 gggcgccac 397 ||||||||| Sbjct: 740 gggcgccac 732
>emb|Z82255.1|HSU75A4 Human DNA sequence from clone LL0XNC01-75A4 on chromosome X, complete sequence Length = 39132 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 51 aaggaaccagaaaattaatgctgga 75 ||||||||||||||||||| ||||| Sbjct: 25103 aaggaaccagaaaattaattctgga 25127
>gb|BT013396.1| Lycopersicon esculentum clone 135671R, mRNA sequence Length = 1129 Score = 40.1 bits (20), Expect = 6.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 417 ccgtaggtgggctggtggaagggccacgcgca 448 |||||| ||||||||||||| ||||| ||||| Sbjct: 679 ccgtagatgggctggtggaatggccaggcgca 648
>ref|XM_848883.1| PREDICTED: Canis familiaris similar to GRIP and coiled-coil domain-containing 2 isoform a (LOC611244), mRNA Length = 2917 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 138 gcaggaagcaagtacttcct 157 |||||||||||||||||||| Sbjct: 2733 gcaggaagcaagtacttcct 2752
>ref|XM_547838.2| PREDICTED: Canis familiaris similar to CG2126-PA (LOC490716), mRNA Length = 1461 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 138 gcaggaagcaagtacttcct 157 |||||||||||||||||||| Sbjct: 1177 gcaggaagcaagtacttcct 1158
>emb|AL353794.10| Human DNA sequence from clone RP11-466A17 on chromosome 9 Contains part of the GNA14 gene for guanine nucleotide binding protein (G protein) alpha 14 and the 3' end of a novel gene, complete sequence Length = 70356 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 45 tgaacaaaggaaccagaaaa 64 |||||||||||||||||||| Sbjct: 43933 tgaacaaaggaaccagaaaa 43914
>gb|AC087726.36| Chlamydomonas reinhardtii clone cr-40a20, complete sequence Length = 168794 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 271 cctccagcggcgcgtcgctg 290 |||||||||||||||||||| Sbjct: 80557 cctccagcggcgcgtcgctg 80576
>gb|AC084048.5| Homo sapiens BAC clone RP11-61G19 from 4, complete sequence Length = 131584 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 55 aaccagaaaattaatgctggagtg 78 |||||||||||||| ||||||||| Sbjct: 6328 aaccagaaaattaaagctggagtg 6351
>gb|AC093767.2| Homo sapiens BAC clone RP11-107E21 from 4, complete sequence Length = 149505 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 47 aacaaaggaaccagaaaattaatg 70 ||||||||||||||||||| |||| Sbjct: 11226 aacaaaggaaccagaaaataaatg 11249
>gb|AC154822.2| Mus musculus BAC clone RP24-537L18 from 13, complete sequence Length = 167628 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 agcaagtacttcctgccatg 163 |||||||||||||||||||| Sbjct: 15465 agcaagtacttcctgccatg 15484
>emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid complete sequence Length = 2094509 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 267 gcggcctccagcggcgcgtc 286 |||||||||||||||||||| Sbjct: 90437 gcggcctccagcggcgcgtc 90418
>gb|AY105178.1| Zea mays PCO152151 mRNA sequence Length = 505 Score = 40.1 bits (20), Expect = 6.5 Identities = 32/36 (88%) Strand = Plus / Minus Query: 358 tgaccatggcgtcggccccaacgtcgccgttgggcg 393 |||||||| |||| |||| |||||||||||||||| Sbjct: 392 tgaccatgccgtccaccccgacgtcgccgttgggcg 357
>gb|AF111168.2|AF111168 Homo sapiens serine palmitoyl transferase, subunit II gene, complete cds; and unknown genes Length = 231464 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 70 gctggagtgcagcctgcact 89 |||||||||||||||||||| Sbjct: 66942 gctggagtgcagcctgcact 66923 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,013,177 Number of Sequences: 3902068 Number of extensions: 4013177 Number of successful extensions: 72533 Number of sequences better than 10.0: 46 Number of HSP's better than 10.0 without gapping: 46 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 72108 Number of HSP's gapped (non-prelim): 393 length of query: 480 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 458 effective length of database: 17,147,199,772 effective search space: 7853417495576 effective search space used: 7853417495576 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
