Clone Name | rbart48b02 |
---|---|
Clone Library Name | barley_pub |
>ref|XM_474454.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1017 Score = 129 bits (65), Expect = 9e-27 Identities = 106/117 (90%), Gaps = 2/117 (1%) Strand = Plus / Minus Query: 341 ccatggatttggcgaactgcgcgaagaaggcgtccttgctgcgcg-cgaactgcctcacg 399 ||||||| ||||||||||||| |||||||||| ||||| | || | |||||||||| ||| Sbjct: 886 ccatggacttggcgaactgcgtgaagaaggcggccttg-tccgtggcgaactgcctgacg 828 Query: 400 atgggcgccgtggtgcggtccttgatgagcgccatgtcggaggtgaacacgccctgg 456 |||||||||||| | |||||||||||||||||||||||||||||||| ||||||||| Sbjct: 827 atgggcgccgtgatccggtccttgatgagcgccatgtcggaggtgaagacgccctgg 771 Score = 48.1 bits (24), Expect = 0.027 Identities = 30/32 (93%) Strand = Plus / Minus Query: 277 ctgaagcagctgcgacggatctcaccgacgtt 308 |||||||||||||| |||||||| |||||||| Sbjct: 950 ctgaagcagctgcggcggatctcgccgacgtt 919
>emb|AJ245900.1|OSA245900 Oryza sativa chromosome 4 BAC q3037-207F1 complete genome Length = 124321 Score = 129 bits (65), Expect = 9e-27 Identities = 106/117 (90%), Gaps = 2/117 (1%) Strand = Plus / Minus Query: 341 ccatggatttggcgaactgcgcgaagaaggcgtccttgctgcgcg-cgaactgcctcacg 399 ||||||| ||||||||||||| |||||||||| ||||| | || | |||||||||| ||| Sbjct: 72398 ccatggacttggcgaactgcgtgaagaaggcggccttg-tccgtggcgaactgcctgacg 72340 Query: 400 atgggcgccgtggtgcggtccttgatgagcgccatgtcggaggtgaacacgccctgg 456 |||||||||||| | |||||||||||||||||||||||||||||||| ||||||||| Sbjct: 72339 atgggcgccgtgatccggtccttgatgagcgccatgtcggaggtgaagacgccctgg 72283 Score = 127 bits (64), Expect = 4e-26 Identities = 111/124 (89%), Gaps = 2/124 (1%) Strand = Plus / Minus Query: 333 gagcttggccatggatttggcgaactgcgcgaagaaggcgtccttgctgcgcg-cgaact 391 ||||||| ||||||| ||||||||||||| |||||| ||| ||||| | |||| |||||| Sbjct: 75713 gagcttgaccatggacttggcgaactgcgtgaagaatgcggccttg-tccgcggcgaact 75655 Query: 392 gcctcacgatgggcgccgtggtgcggtccttgatgagcgccatgtcggaggtgaacacgc 451 |||| ||||| ||||||||| | ||||||||||||||||||||||||||||||||||| | Sbjct: 75654 gcctgacgattggcgccgtgatccggtccttgatgagcgccatgtcggaggtgaacaccc 75595 Query: 452 cctg 455 |||| Sbjct: 75594 cctg 75591 Score = 69.9 bits (35), Expect = 7e-09 Identities = 86/103 (83%) Strand = Plus / Minus Query: 353 cgaactgcgcgaagaaggcgtccttgctgcgcgcgaactgcctcacgatgggcgccgtgg 412 ||||||||| |||||||||| ||||| |||||||| |||| ||||||| ||| || Sbjct: 82498 cgaactgcgtgaagaaggcggccttgtcctgcgcgaaccgcctgacgatggccgcagttt 82439 Query: 413 tgcggtccttgatgagcgccatgtcggaggtgaacacgccctg 455 | ||||| ||||||||||||||||||||||||||| ||||| Sbjct: 82438 gggggtccaggatgagcgccatgtcggaggtgaacaccccctg 82396 Score = 48.1 bits (24), Expect = 0.027 Identities = 30/32 (93%) Strand = Plus / Minus Query: 277 ctgaagcagctgcgacggatctcaccgacgtt 308 |||||||||||||| |||||||| |||||||| Sbjct: 75769 ctgaagcagctgcggcggatctcgccgacgtt 75738 Score = 48.1 bits (24), Expect = 0.027 Identities = 30/32 (93%) Strand = Plus / Minus Query: 277 ctgaagcagctgcgacggatctcaccgacgtt 308 |||||||||||||| |||||||| |||||||| Sbjct: 72462 ctgaagcagctgcggcggatctcgccgacgtt 72431
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 129 bits (65), Expect = 9e-27 Identities = 106/117 (90%), Gaps = 2/117 (1%) Strand = Plus / Plus Query: 341 ccatggatttggcgaactgcgcgaagaaggcgtccttgctgcgcg-cgaactgcctcacg 399 ||||||| ||||||||||||| |||||||||| ||||| | || | |||||||||| ||| Sbjct: 35280836 ccatggacttggcgaactgcgtgaagaaggcggccttg-tccgtggcgaactgcctgacg 35280894 Query: 400 atgggcgccgtggtgcggtccttgatgagcgccatgtcggaggtgaacacgccctgg 456 |||||||||||| | |||||||||||||||||||||||||||||||| ||||||||| Sbjct: 35280895 atgggcgccgtgatccggtccttgatgagcgccatgtcggaggtgaagacgccctgg 35280951 Score = 125 bits (63), Expect = 1e-25 Identities = 150/179 (83%) Strand = Plus / Plus Query: 279 gaagcagctgcgacggatctcaccgacgttgccgccgggccggggcgcggtggcgagctt 338 |||||||||||| |||||||| |||||||| |||||||||| ||| | || |||||| Sbjct: 35250654 gaagcagctgcggcggatctcgccgacgttcccgccgggcctgggtaccttgctgagctt 35250713 Query: 339 ggccatggatttggcgaactgcgcgaagaaggcgtccttgctgcgcgcgaactgcctcac 398 | ||||||| ||||| ||||| ||||||||||| ||||| ||||||||||||| || Sbjct: 35250714 gaccatggacttggcaaactggtcgaagaaggcggccttgtcctgcgcgaactgcctgac 35250773 Query: 399 gatgggcgccgtggtgcggtccttgatgagcgccatgtcggaggtgaacacgccctggc 457 ||||| ||||||||| ||| ||| ||||||||||||||||| ||||| || ||||||| Sbjct: 35250774 gatggacgccgtggtctggttcttcatgagcgccatgtcggaagtgaagacaccctggc 35250832 Score = 111 bits (56), Expect = 2e-21 Identities = 109/124 (87%), Gaps = 2/124 (1%) Strand = Plus / Plus Query: 333 gagcttggccatggatttggcgaactgcgcgaagaaggcgtccttgctgcgcg-cgaact 391 ||||||| ||||||| |||||||||||| |||||| ||| ||||| | |||| |||||| Sbjct: 35258114 gagcttgaccatggacttggcgaactgcctgaagaatgcggccttg-tccgcggcgaact 35258172 Query: 392 gcctcacgatgggcgccgtggtgcggtccttgatgagcgccatgtcggaggtgaacacgc 451 |||| ||||| ||||||||| | |||||||||||||||||||| |||||||||||||| | Sbjct: 35258173 gcctgacgattggcgccgtgatccggtccttgatgagcgccatatcggaggtgaacaccc 35258232 Query: 452 cctg 455 |||| Sbjct: 35258233 cctg 35258236 Score = 69.9 bits (35), Expect = 7e-09 Identities = 86/103 (83%) Strand = Plus / Plus Query: 353 cgaactgcgcgaagaaggcgtccttgctgcgcgcgaactgcctcacgatgggcgccgtgg 412 ||||||||| |||||||||| ||||| |||||||| |||| ||||||| ||| || Sbjct: 35242602 cgaactgcgtgaagaaggcggccttgtcctgcgcgaaccgcctgacgatggccgcagttt 35242661 Query: 413 tgcggtccttgatgagcgccatgtcggaggtgaacacgccctg 455 | ||||| ||||||||||||||||||||||||||| ||||| Sbjct: 35242662 gggggtccaggatgagcgccatgtcggaggtgaacaccccctg 35242704 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 336 cttggccatggatttggcgaactgcgcgaagaag 369 |||| ||||||| ||||||||||||||||||||| Sbjct: 20964324 cttgaccatggacttggcgaactgcgcgaagaag 20964291 Score = 48.1 bits (24), Expect = 0.027 Identities = 30/32 (93%) Strand = Plus / Plus Query: 277 ctgaagcagctgcgacggatctcaccgacgtt 308 |||||||||||||| |||||||| |||||||| Sbjct: 35280772 ctgaagcagctgcggcggatctcgccgacgtt 35280803 Score = 48.1 bits (24), Expect = 0.027 Identities = 30/32 (93%) Strand = Plus / Plus Query: 277 ctgaagcagctgcgacggatctcaccgacgtt 308 |||||||||||||| |||||||| |||||||| Sbjct: 35258058 ctgaagcagctgcggcggatctcgccgacgtt 35258089 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 2 ggaacggagggagtatatac 21 |||||||||||||||||||| Sbjct: 15939240 ggaacggagggagtatatac 15939221
>dbj|AK073360.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033030A01, full insert sequence Length = 1240 Score = 129 bits (65), Expect = 9e-27 Identities = 106/117 (90%), Gaps = 2/117 (1%) Strand = Plus / Minus Query: 341 ccatggatttggcgaactgcgcgaagaaggcgtccttgctgcgcg-cgaactgcctcacg 399 ||||||| ||||||||||||| |||||||||| ||||| | || | |||||||||| ||| Sbjct: 952 ccatggacttggcgaactgcgtgaagaaggcggccttg-tccgtggcgaactgcctgacg 894 Query: 400 atgggcgccgtggtgcggtccttgatgagcgccatgtcggaggtgaacacgccctgg 456 |||||||||||| | |||||||||||||||||||||||||||||||| ||||||||| Sbjct: 893 atgggcgccgtgatccggtccttgatgagcgccatgtcggaggtgaagacgccctgg 837 Score = 48.1 bits (24), Expect = 0.027 Identities = 30/32 (93%) Strand = Plus / Minus Query: 277 ctgaagcagctgcgacggatctcaccgacgtt 308 |||||||||||||| |||||||| |||||||| Sbjct: 1016 ctgaagcagctgcggcggatctcgccgacgtt 985
>tpe|BN000593.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx64 gene for class III peroxidase 64 precursor, exons 1-2 Length = 1091 Score = 129 bits (65), Expect = 9e-27 Identities = 106/117 (90%), Gaps = 2/117 (1%) Strand = Plus / Minus Query: 341 ccatggatttggcgaactgcgcgaagaaggcgtccttgctgcgcg-cgaactgcctcacg 399 ||||||| ||||||||||||| |||||||||| ||||| | || | |||||||||| ||| Sbjct: 960 ccatggacttggcgaactgcgtgaagaaggcggccttg-tccgtggcgaactgcctgacg 902 Query: 400 atgggcgccgtggtgcggtccttgatgagcgccatgtcggaggtgaacacgccctgg 456 |||||||||||| | |||||||||||||||||||||||||||||||| ||||||||| Sbjct: 901 atgggcgccgtgatccggtccttgatgagcgccatgtcggaggtgaagacgccctgg 845 Score = 48.1 bits (24), Expect = 0.027 Identities = 30/32 (93%) Strand = Plus / Minus Query: 277 ctgaagcagctgcgacggatctcaccgacgtt 308 |||||||||||||| |||||||| |||||||| Sbjct: 1024 ctgaagcagctgcggcggatctcgccgacgtt 993
>emb|AL606637.3|OSJN00076 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0039K24, complete sequence Length = 173770 Score = 129 bits (65), Expect = 9e-27 Identities = 106/117 (90%), Gaps = 2/117 (1%) Strand = Plus / Plus Query: 341 ccatggatttggcgaactgcgcgaagaaggcgtccttgctgcgcg-cgaactgcctcacg 399 ||||||| ||||||||||||| |||||||||| ||||| | || | |||||||||| ||| Sbjct: 76681 ccatggacttggcgaactgcgtgaagaaggcggccttg-tccgtggcgaactgcctgacg 76739 Query: 400 atgggcgccgtggtgcggtccttgatgagcgccatgtcggaggtgaacacgccctgg 456 |||||||||||| | |||||||||||||||||||||||||||||||| ||||||||| Sbjct: 76740 atgggcgccgtgatccggtccttgatgagcgccatgtcggaggtgaagacgccctgg 76796 Score = 125 bits (63), Expect = 1e-25 Identities = 150/179 (83%) Strand = Plus / Plus Query: 279 gaagcagctgcgacggatctcaccgacgttgccgccgggccggggcgcggtggcgagctt 338 |||||||||||| |||||||| |||||||| |||||||||| ||| | || |||||| Sbjct: 46499 gaagcagctgcggcggatctcgccgacgttcccgccgggcctgggtaccttgctgagctt 46558 Query: 339 ggccatggatttggcgaactgcgcgaagaaggcgtccttgctgcgcgcgaactgcctcac 398 | ||||||| ||||| ||||| ||||||||||| ||||| ||||||||||||| || Sbjct: 46559 gaccatggacttggcaaactggtcgaagaaggcggccttgtcctgcgcgaactgcctgac 46618 Query: 399 gatgggcgccgtggtgcggtccttgatgagcgccatgtcggaggtgaacacgccctggc 457 ||||| ||||||||| ||| ||| ||||||||||||||||| ||||| || ||||||| Sbjct: 46619 gatggacgccgtggtctggttcttcatgagcgccatgtcggaagtgaagacaccctggc 46677 Score = 111 bits (56), Expect = 2e-21 Identities = 109/124 (87%), Gaps = 2/124 (1%) Strand = Plus / Plus Query: 333 gagcttggccatggatttggcgaactgcgcgaagaaggcgtccttgctgcgcg-cgaact 391 ||||||| ||||||| |||||||||||| |||||| ||| ||||| | |||| |||||| Sbjct: 53959 gagcttgaccatggacttggcgaactgcctgaagaatgcggccttg-tccgcggcgaact 54017 Query: 392 gcctcacgatgggcgccgtggtgcggtccttgatgagcgccatgtcggaggtgaacacgc 451 |||| ||||| ||||||||| | |||||||||||||||||||| |||||||||||||| | Sbjct: 54018 gcctgacgattggcgccgtgatccggtccttgatgagcgccatatcggaggtgaacaccc 54077 Query: 452 cctg 455 |||| Sbjct: 54078 cctg 54081 Score = 69.9 bits (35), Expect = 7e-09 Identities = 86/103 (83%) Strand = Plus / Plus Query: 353 cgaactgcgcgaagaaggcgtccttgctgcgcgcgaactgcctcacgatgggcgccgtgg 412 ||||||||| |||||||||| ||||| |||||||| |||| ||||||| ||| || Sbjct: 38447 cgaactgcgtgaagaaggcggccttgtcctgcgcgaaccgcctgacgatggccgcagttt 38506 Query: 413 tgcggtccttgatgagcgccatgtcggaggtgaacacgccctg 455 | ||||| ||||||||||||||||||||||||||| ||||| Sbjct: 38507 gggggtccaggatgagcgccatgtcggaggtgaacaccccctg 38549 Score = 48.1 bits (24), Expect = 0.027 Identities = 30/32 (93%) Strand = Plus / Plus Query: 277 ctgaagcagctgcgacggatctcaccgacgtt 308 |||||||||||||| |||||||| |||||||| Sbjct: 76617 ctgaagcagctgcggcggatctcgccgacgtt 76648 Score = 48.1 bits (24), Expect = 0.027 Identities = 30/32 (93%) Strand = Plus / Plus Query: 277 ctgaagcagctgcgacggatctcaccgacgtt 308 |||||||||||||| |||||||| |||||||| Sbjct: 53903 ctgaagcagctgcggcggatctcgccgacgtt 53934
>emb|AL732348.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0701F11, complete sequence Length = 82895 Score = 127 bits (64), Expect = 4e-26 Identities = 111/124 (89%), Gaps = 2/124 (1%) Strand = Plus / Plus Query: 333 gagcttggccatggatttggcgaactgcgcgaagaaggcgtccttgctgcgcg-cgaact 391 ||||||| ||||||| ||||||||||||| |||||| ||| ||||| | |||| |||||| Sbjct: 81334 gagcttgaccatggacttggcgaactgcgtgaagaatgcggccttg-tccgcggcgaact 81392 Query: 392 gcctcacgatgggcgccgtggtgcggtccttgatgagcgccatgtcggaggtgaacacgc 451 |||| ||||| ||||||||| | ||||||||||||||||||||||||||||||||||| | Sbjct: 81393 gcctgacgattggcgccgtgatccggtccttgatgagcgccatgtcggaggtgaacaccc 81452 Query: 452 cctg 455 |||| Sbjct: 81453 cctg 81456 Score = 69.9 bits (35), Expect = 7e-09 Identities = 86/103 (83%) Strand = Plus / Plus Query: 353 cgaactgcgcgaagaaggcgtccttgctgcgcgcgaactgcctcacgatgggcgccgtgg 412 ||||||||| |||||||||| ||||| |||||||| |||| ||||||| ||| || Sbjct: 74549 cgaactgcgtgaagaaggcggccttgtcctgcgcgaaccgcctgacgatggccgcagttt 74608 Query: 413 tgcggtccttgatgagcgccatgtcggaggtgaacacgccctg 455 | ||||| ||||||||||||||||||||||||||| ||||| Sbjct: 74609 gggggtccaggatgagcgccatgtcggaggtgaacaccccctg 74651 Score = 48.1 bits (24), Expect = 0.027 Identities = 30/32 (93%) Strand = Plus / Plus Query: 277 ctgaagcagctgcgacggatctcaccgacgtt 308 |||||||||||||| |||||||| |||||||| Sbjct: 81278 ctgaagcagctgcggcggatctcgccgacgtt 81309
>ref|XM_474449.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1059 Score = 125 bits (63), Expect = 1e-25 Identities = 150/179 (83%) Strand = Plus / Minus Query: 279 gaagcagctgcgacggatctcaccgacgttgccgccgggccggggcgcggtggcgagctt 338 |||||||||||| |||||||| |||||||| |||||||||| ||| | || |||||| Sbjct: 969 gaagcagctgcggcggatctcgccgacgttcccgccgggcctgggtaccttgctgagctt 910 Query: 339 ggccatggatttggcgaactgcgcgaagaaggcgtccttgctgcgcgcgaactgcctcac 398 | ||||||| ||||| ||||| ||||||||||| ||||| ||||||||||||| || Sbjct: 909 gaccatggacttggcaaactggtcgaagaaggcggccttgtcctgcgcgaactgcctgac 850 Query: 399 gatgggcgccgtggtgcggtccttgatgagcgccatgtcggaggtgaacacgccctggc 457 ||||| ||||||||| ||| ||| ||||||||||||||||| ||||| || ||||||| Sbjct: 849 gatggacgccgtggtctggttcttcatgagcgccatgtcggaagtgaagacaccctggc 791
>dbj|AK067667.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013118D03, full insert sequence Length = 1385 Score = 125 bits (63), Expect = 1e-25 Identities = 150/179 (83%) Strand = Plus / Minus Query: 279 gaagcagctgcgacggatctcaccgacgttgccgccgggccggggcgcggtggcgagctt 338 |||||||||||| |||||||| |||||||| |||||||||| ||| | || |||||| Sbjct: 1100 gaagcagctgcggcggatctcgccgacgttcccgccgggcctgggtaccttgctgagctt 1041 Query: 339 ggccatggatttggcgaactgcgcgaagaaggcgtccttgctgcgcgcgaactgcctcac 398 | ||||||| ||||| ||||| ||||||||||| ||||| ||||||||||||| || Sbjct: 1040 gaccatggacttggcaaactggtcgaagaaggcggccttgtcctgcgcgaactgcctgac 981 Query: 399 gatgggcgccgtggtgcggtccttgatgagcgccatgtcggaggtgaacacgccctggc 457 ||||| ||||||||| ||| ||| ||||||||||||||||| ||||| || ||||||| Sbjct: 980 gatggacgccgtggtctggttcttcatgagcgccatgtcggaagtgaagacaccctggc 922
>tpe|BN000591.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx62 gene for class III peroxidase 62 precursor, exons 1-2 Length = 1186 Score = 125 bits (63), Expect = 1e-25 Identities = 150/179 (83%) Strand = Plus / Minus Query: 279 gaagcagctgcgacggatctcaccgacgttgccgccgggccggggcgcggtggcgagctt 338 |||||||||||| |||||||| |||||||| |||||||||| ||| | || |||||| Sbjct: 1096 gaagcagctgcggcggatctcgccgacgttcccgccgggcctgggtaccttgctgagctt 1037 Query: 339 ggccatggatttggcgaactgcgcgaagaaggcgtccttgctgcgcgcgaactgcctcac 398 | ||||||| ||||| ||||| ||||||||||| ||||| ||||||||||||| || Sbjct: 1036 gaccatggacttggcaaactggtcgaagaaggcggccttgtcctgcgcgaactgcctgac 977 Query: 399 gatgggcgccgtggtgcggtccttgatgagcgccatgtcggaggtgaacacgccctggc 457 ||||| ||||||||| ||| ||| ||||||||||||||||| ||||| || ||||||| Sbjct: 976 gatggacgccgtggtctggttcttcatgagcgccatgtcggaagtgaagacaccctggc 918
>ref|XM_474450.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1008 Score = 111 bits (56), Expect = 2e-21 Identities = 109/124 (87%), Gaps = 2/124 (1%) Strand = Plus / Minus Query: 333 gagcttggccatggatttggcgaactgcgcgaagaaggcgtccttgctgcgcg-cgaact 391 ||||||| ||||||| |||||||||||| |||||| ||| ||||| | |||| |||||| Sbjct: 894 gagcttgaccatggacttggcgaactgcctgaagaatgcggccttg-tccgcggcgaact 836 Query: 392 gcctcacgatgggcgccgtggtgcggtccttgatgagcgccatgtcggaggtgaacacgc 451 |||| ||||| ||||||||| | |||||||||||||||||||| |||||||||||||| | Sbjct: 835 gcctgacgattggcgccgtgatccggtccttgatgagcgccatatcggaggtgaacaccc 776 Query: 452 cctg 455 |||| Sbjct: 775 cctg 772 Score = 48.1 bits (24), Expect = 0.027 Identities = 30/32 (93%) Strand = Plus / Minus Query: 277 ctgaagcagctgcgacggatctcaccgacgtt 308 |||||||||||||| |||||||| |||||||| Sbjct: 950 ctgaagcagctgcggcggatctcgccgacgtt 919
>tpe|BN000592.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx63 gene for class III peroxidase 63 precursor, exons 1-2 Length = 1098 Score = 111 bits (56), Expect = 2e-21 Identities = 109/124 (87%), Gaps = 2/124 (1%) Strand = Plus / Minus Query: 333 gagcttggccatggatttggcgaactgcgcgaagaaggcgtccttgctgcgcg-cgaact 391 ||||||| ||||||| |||||||||||| |||||| ||| ||||| | |||| |||||| Sbjct: 984 gagcttgaccatggacttggcgaactgcctgaagaatgcggccttg-tccgcggcgaact 926 Query: 392 gcctcacgatgggcgccgtggtgcggtccttgatgagcgccatgtcggaggtgaacacgc 451 |||| ||||| ||||||||| | |||||||||||||||||||| |||||||||||||| | Sbjct: 925 gcctgacgattggcgccgtgatccggtccttgatgagcgccatatcggaggtgaacaccc 866 Query: 452 cctg 455 |||| Sbjct: 865 cctg 862 Score = 48.1 bits (24), Expect = 0.027 Identities = 30/32 (93%) Strand = Plus / Minus Query: 277 ctgaagcagctgcgacggatctcaccgacgtt 308 |||||||||||||| |||||||| |||||||| Sbjct: 1040 ctgaagcagctgcggcggatctcgccgacgtt 1009
>dbj|AK070680.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023060N16, full insert sequence Length = 2256 Score = 103 bits (52), Expect = 5e-19 Identities = 108/124 (87%), Gaps = 2/124 (1%) Strand = Plus / Minus Query: 333 gagcttggccatggatttggcgaactgcgcgaagaaggcgtccttgctgcgcg-cgaact 391 ||||||| ||||||| |||||||||||| |||||| ||| ||||| | |||| ||| || Sbjct: 919 gagcttgaccatggacttggcgaactgcctgaagaatgcggccttg-tccgcggcgagct 861 Query: 392 gcctcacgatgggcgccgtggtgcggtccttgatgagcgccatgtcggaggtgaacacgc 451 |||| ||||| ||||||||| | |||||||||||||||||||| |||||||||||||| | Sbjct: 860 gcctgacgattggcgccgtgatccggtccttgatgagcgccatatcggaggtgaacaccc 801 Query: 452 cctg 455 |||| Sbjct: 800 cctg 797 Score = 48.1 bits (24), Expect = 0.027 Identities = 30/32 (93%) Strand = Plus / Minus Query: 277 ctgaagcagctgcgacggatctcaccgacgtt 308 |||||||||||||| |||||||| |||||||| Sbjct: 975 ctgaagcagctgcggcggatctcgccgacgtt 944
>ref|XM_474448.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1023 Score = 69.9 bits (35), Expect = 7e-09 Identities = 86/103 (83%) Strand = Plus / Minus Query: 353 cgaactgcgcgaagaaggcgtccttgctgcgcgcgaactgcctcacgatgggcgccgtgg 412 ||||||||| |||||||||| ||||| |||||||| |||| ||||||| ||| || Sbjct: 889 cgaactgcgtgaagaaggcggccttgtcctgcgcgaaccgcctgacgatggccgcagttt 830 Query: 413 tgcggtccttgatgagcgccatgtcggaggtgaacacgccctg 455 | ||||| ||||||||||||||||||||||||||| ||||| Sbjct: 829 gggggtccaggatgagcgccatgtcggaggtgaacaccccctg 787
>dbj|AK104928.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-044-B06, full insert sequence Length = 1299 Score = 69.9 bits (35), Expect = 7e-09 Identities = 86/103 (83%) Strand = Plus / Minus Query: 353 cgaactgcgcgaagaaggcgtccttgctgcgcgcgaactgcctcacgatgggcgccgtgg 412 ||||||||| |||||||||| ||||| |||||||| |||| ||||||| ||| || Sbjct: 978 cgaactgcgtgaagaaggcggccttgtcctgcgcgaaccgcctgacgatggccgcagttt 919 Query: 413 tgcggtccttgatgagcgccatgtcggaggtgaacacgccctg 455 | ||||| ||||||||||||||||||||||||||| ||||| Sbjct: 918 gggggtccaggatgagcgccatgtcggaggtgaacaccccctg 876
>dbj|AK065090.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001L22, full insert sequence Length = 1333 Score = 69.9 bits (35), Expect = 7e-09 Identities = 86/103 (83%) Strand = Plus / Minus Query: 353 cgaactgcgcgaagaaggcgtccttgctgcgcgcgaactgcctcacgatgggcgccgtgg 412 ||||||||| |||||||||| ||||| |||||||| |||| ||||||| ||| || Sbjct: 979 cgaactgcgtgaagaaggcggccttgtcctgcgcgaaccgcctgacgatggccgcagttt 920 Query: 413 tgcggtccttgatgagcgccatgtcggaggtgaacacgccctg 455 | ||||| ||||||||||||||||||||||||||| ||||| Sbjct: 919 gggggtccaggatgagcgccatgtcggaggtgaacaccccctg 877
>tpe|BN000590.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx61 gene for class III peroxidase 61, exons 1-2 Length = 1178 Score = 69.9 bits (35), Expect = 7e-09 Identities = 86/103 (83%) Strand = Plus / Minus Query: 353 cgaactgcgcgaagaaggcgtccttgctgcgcgcgaactgcctcacgatgggcgccgtgg 412 ||||||||| |||||||||| ||||| |||||||| |||| ||||||| ||| || Sbjct: 1044 cgaactgcgtgaagaaggcggccttgtcctgcgcgaaccgcctgacgatggccgcagttt 985 Query: 413 tgcggtccttgatgagcgccatgtcggaggtgaacacgccctg 455 | ||||| ||||||||||||||||||||||||||| ||||| Sbjct: 984 gggggtccaggatgagcgccatgtcggaggtgaacaccccctg 942
>emb|AL731628.4|OSJN00282 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0088C09, complete sequence Length = 96079 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 336 cttggccatggatttggcgaactgcgcgaagaag 369 |||| ||||||| ||||||||||||||||||||| Sbjct: 67556 cttgaccatggacttggcgaactgcgcgaagaag 67523
>dbj|AK108989.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-153-F11, full insert sequence Length = 1351 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 336 cttggccatggatttggcgaactgcgcgaagaag 369 |||| ||||||| ||||||||||||||||||||| Sbjct: 1045 cttgaccatggacttggcgaactgcgcgaagaag 1012
>tpe|BN000583.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx54 gene for class III peroxidase 54 precursor, exon 1 Length = 1038 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 336 cttggccatggatttggcgaactgcgcgaagaag 369 |||| ||||||| ||||||||||||||||||||| Sbjct: 963 cttgaccatggacttggcgaactgcgcgaagaag 930
>emb|AL731590.4|OSJN00233 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0035I04, complete sequence Length = 140890 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 336 cttggccatggatttggcgaactgcgcgaagaag 369 |||| ||||||| ||||||||||||||||||||| Sbjct: 9730 cttgaccatggacttggcgaactgcgcgaagaag 9697
>gb|AY857763.1| Triticum monococcum peroxidase 9 (POX9) mRNA, partial cds Length = 760 Score = 48.1 bits (24), Expect = 0.027 Identities = 27/28 (96%) Strand = Plus / Minus Query: 341 ccatggatttggcgaactgcgcgaagaa 368 |||||||||||||||||||| ||||||| Sbjct: 489 ccatggatttggcgaactgctcgaagaa 462
>emb|BX640677.1|HSM806736 Homo sapiens genomic DNA; cDNA DKFZp686K1692 (from clone DKFZp686K1692) Length = 5959 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 49 atttttgaaaagtctttttgct 70 |||||||||||||||||||||| Sbjct: 2313 atttttgaaaagtctttttgct 2334
>gb|AC091565.10| Homo sapiens chromosome 15, clone RP11-228M15, complete sequence Length = 180741 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 49 atttttgaaaagtctttttgct 70 |||||||||||||||||||||| Sbjct: 109988 atttttgaaaagtctttttgct 109967
>gb|AC025138.14| Homo sapiens chromosome 15, clone RP11-291O21, complete sequence Length = 173173 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 49 atttttgaaaagtctttttgct 70 |||||||||||||||||||||| Sbjct: 33795 atttttgaaaagtctttttgct 33774
>gb|DQ376124.1| Eucalyptus globulus subsp. globulus peroxidase (Px1) mRNA, partial cds Length = 957 Score = 44.1 bits (22), Expect = 0.42 Identities = 31/34 (91%) Strand = Plus / Minus Query: 336 cttggccatggatttggcgaactgcgcgaagaag 369 |||| ||||||| |||||||||||| |||||||| Sbjct: 723 cttgaccatggacttggcgaactgctcgaagaag 690
>gb|AC137568.8| Homo sapiens chromosome 15, clone RP11-1217C12, complete sequence Length = 199045 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 49 atttttgaaaagtctttttgct 70 |||||||||||||||||||||| Sbjct: 98265 atttttgaaaagtctttttgct 98244
>gb|AC055876.16| Homo sapiens chromosome 15, clone RP11-578F21, complete sequence Length = 192533 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 49 atttttgaaaagtctttttgct 70 |||||||||||||||||||||| Sbjct: 16414 atttttgaaaagtctttttgct 16435
>gb|AC126332.9| Homo sapiens chromosome 15, clone RP11-665A22, complete sequence Length = 161099 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 49 atttttgaaaagtctttttgct 70 |||||||||||||||||||||| Sbjct: 42892 atttttgaaaagtctttttgct 42871
>gb|AE014292.2| Brucella suis 1330 chromosome II, complete sequence Length = 1207381 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 421 ttgatgagcgccatgtcggag 441 ||||||||||||||||||||| Sbjct: 581898 ttgatgagcgccatgtcggag 581918
>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome Length = 3696649 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 237 ggcgtcgacgacggtgtcgatggcgcgccgggc 269 |||||||| |||| |||||||||||||| |||| Sbjct: 309971 ggcgtcgatgacgttgtcgatggcgcgctgggc 310003
>gb|AY350710.1| Brassica oleracea clone BAC Bo37N21, partial sequence Length = 78346 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1 aggaacggagggagtatatac 21 ||||||||||||||||||||| Sbjct: 47216 aggaacggagggagtatatac 47236
>ref|XM_754706.1| Ustilago maydis 521 hypothetical protein (UM03652.1) partial mRNA Length = 1404 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 241 tcgacgacggtgtcgatggcg 261 ||||||||||||||||||||| Sbjct: 175 tcgacgacggtgtcgatggcg 195
>gb|AC114821.4| Mus musculus BAC clone RP23-72K1 from chromosome 1, complete sequence Length = 197978 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 442 gtgaacacgccctggctgctc 462 ||||||||||||||||||||| Sbjct: 106468 gtgaacacgccctggctgctc 106488
>gb|AE017157.1| Chlamydophila pneumoniae TW-183, section 1 of 4 of the complete genome Length = 300923 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 45 tcaaatttttgaaaagtcttt 65 ||||||||||||||||||||| Sbjct: 136224 tcaaatttttgaaaagtcttt 136244
>gb|AE002161.1| Chlamydophila pneumoniae AR39, complete genome Length = 1229853 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 45 tcaaatttttgaaaagtcttt 65 ||||||||||||||||||||| Sbjct: 702472 tcaaatttttgaaaagtcttt 702452
>gb|AY028608.1| Brassica oleracea transcription factor-like protein (T2I1_290) gene, partial cds; putative oleosin (GRP1), putative oleosin (GRP2), putative oleosin (GRP3), putative oleosin (GRP4), and putative oleosin (GRP5) genes, complete cds; and zinc finger transcription factor-like protein (T2I1_210) gene, partial cds Length = 20543 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1 aggaacggagggagtatatac 21 ||||||||||||||||||||| Sbjct: 2376 aggaacggagggagtatatac 2356
>gb|AE009702.1| Brucella melitensis 16M chromosome II, section 64 of 107 of the complete sequence Length = 12043 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 421 ttgatgagcgccatgtcggag 441 ||||||||||||||||||||| Sbjct: 7177 ttgatgagcgccatgtcggag 7157
>gb|AE001363.1| Chlamydophila pneumoniae CWL029, complete genome Length = 1230230 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 45 tcaaatttttgaaaagtcttt 65 ||||||||||||||||||||| Sbjct: 138729 tcaaatttttgaaaagtcttt 138749
>dbj|BA000008.3| Chlamydophila pneumoniae J138 genomic DNA, complete sequence Length = 1226565 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 45 tcaaatttttgaaaagtcttt 65 ||||||||||||||||||||| Sbjct: 138440 tcaaatttttgaaaagtcttt 138460
>dbj|AB178018.1| Ralstonia solanacearum hpx24 gene for hypothetical protein, complete cds Length = 6913 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 248 cggtgtcgatggcgcgccggg 268 ||||||||||||||||||||| Sbjct: 5827 cggtgtcgatggcgcgccggg 5807
>gb|AE017224.1| Brucella abortus biovar 1 str. 9-941 chromosome II, complete sequence Length = 1162204 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 421 ttgatgagcgccatgtcggag 441 ||||||||||||||||||||| Sbjct: 635178 ttgatgagcgccatgtcggag 635158
>emb|AL033514.1|CEY75B8A Caenorhabditis elegans YAC Y75B8A, complete sequence Length = 298406 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 47 aaatttttgaaaagtcttttt 67 ||||||||||||||||||||| Sbjct: 168333 aaatttttgaaaagtcttttt 168353
>emb|AM040265.1| Brucella melitensis biovar Abortus chromosome II, complete sequence, strain 2308 Length = 1156948 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 421 ttgatgagcgccatgtcggag 441 ||||||||||||||||||||| Sbjct: 635166 ttgatgagcgccatgtcggag 635146
>dbj|AP006410.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT29C05, TM0301a, complete sequence Length = 28124 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1 aggaacggagggagtatatac 21 ||||||||||||||||||||| Sbjct: 27407 aggaacggagggagtatatac 27427
>dbj|AP004468.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT09A24, TM0003, complete sequence Length = 88828 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1 aggaacggagggagtatatac 21 ||||||||||||||||||||| Sbjct: 10444 aggaacggagggagtatatac 10424
>gb|AE016827.1| Mannheimia succiniciproducens MBEL55E, complete genome Length = 2314078 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 400 atgggcgccgtggtgcggtccttg 423 ||||||||| |||||||||||||| Sbjct: 1621721 atgggcgccatggtgcggtccttg 1621698
>gb|AY857764.1| Triticum monococcum peroxidase 10 (POX10) mRNA, partial cds Length = 1308 Score = 40.1 bits (20), Expect = 6.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 341 ccatggatttggcgaactgcgcgaagaaggcg 372 ||||||| |||||||||||| |||||||||| Sbjct: 925 ccatggacttggcgaactgccggaagaaggcg 894
>gb|AC118289.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0099O15, complete sequence Length = 137357 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 aggaacggagggagtatata 20 |||||||||||||||||||| Sbjct: 9998 aggaacggagggagtatata 9979
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 4 aacggagggagtatatacga 23 |||||||||||||||||||| Sbjct: 8997474 aacggagggagtatatacga 8997493
>emb|Z81528.1|CEF35E2 Caenorhabditis elegans Cosmid F35E2, complete sequence Length = 37439 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 38 actgtgttcaaatttttgaaaagt 61 ||||||||||||||||| |||||| Sbjct: 7600 actgtgttcaaatttttaaaaagt 7623
>gb|U64833.1| Caenorhabditis elegans cosmid B0507, complete sequence Length = 36709 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 44 ttcaaatttttgaaaagtct 63 |||||||||||||||||||| Sbjct: 29114 ttcaaatttttgaaaagtct 29133
>gb|AC144517.7| Medicago truncatula clone mth2-13k17, complete sequence Length = 107710 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 aggaacggagggagtatata 20 |||||||||||||||||||| Sbjct: 34310 aggaacggagggagtatata 34329
>gb|AC146692.14| Medicago truncatula clone mth2-7n20, complete sequence Length = 108084 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 aggaacggagggagtatata 20 |||||||||||||||||||| Sbjct: 54281 aggaacggagggagtatata 54300
>ref|XM_501984.1| Yarrowia lipolytica CLIB122, YALI0C18645g predicted mRNA Length = 2925 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 279 gaagcagctgcgacggatct 298 |||||||||||||||||||| Sbjct: 2788 gaagcagctgcgacggatct 2769
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence Length = 3806533 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 401 tgggcgccgtggtgcggtcc 420 |||||||||||||||||||| Sbjct: 892644 tgggcgccgtggtgcggtcc 892625
>emb|CR378680.1| Photobacterium profundum SS9 chromosome 2; segment 6/7 Length = 349751 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 44 ttcaaatttttgaaaagtcttttt 67 ||||||||||||||||| |||||| Sbjct: 148547 ttcaaatttttgaaaaggcttttt 148570
>emb|AL606625.3|OSJN00039 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0032I19, complete sequence Length = 145383 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 2 ggaacggagggagtatatac 21 |||||||||||||||||||| Sbjct: 23453 ggaacggagggagtatatac 23434
>emb|AL606589.3|OSJN00021 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0008A08, complete sequence Length = 130521 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 2 ggaacggagggagtatatac 21 |||||||||||||||||||| Sbjct: 125805 ggaacggagggagtatatac 125786
>emb|AJ632270.1| Actinoplanes teichomyceticus teicoplanin gene cluster Length = 89976 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 314 cgggccggggcgcggtggcg 333 |||||||||||||||||||| Sbjct: 75093 cgggccggggcgcggtggcg 75112
>emb|AJ538328.1|ECL538328 Enterobacter cloacae putative hemin uptake system (ehuPASTUV genes), strain Z-2376 Length = 10269 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 291 acggatctcaccgacgttgccgcc 314 ||||||| |||||||||||||||| Sbjct: 3380 acggatcacaccgacgttgccgcc 3403
>gb|AC123298.4| Rattus norvegicus BAC CH230-352N4 (Children's Hospital Oakland Research Institute Rat (BN/SsNHsd/MCW) BAC library) complete sequence Length = 175621 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 33 tatatactgtgttcaaattt 52 |||||||||||||||||||| Sbjct: 119746 tatatactgtgttcaaattt 119727
>gb|AC162392.9| Mus musculus 6 BAC RP23-197G11 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 195176 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 42 tgttcaaatttttgaaaagtcttt 65 |||||||||||||| ||||||||| Sbjct: 88645 tgttcaaatttttgcaaagtcttt 88668
>gb|AC166286.14| Medicago truncatula clone mth2-173c1, complete sequence Length = 114609 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 aggaacggagggagtatata 20 |||||||||||||||||||| Sbjct: 45562 aggaacggagggagtatata 45581
>gb|AC115393.5| Rattus norvegicus BAC CH230-103E13 (Children's Hospital Oakland Research Institute Rat (BN/SsNHsd/MCW) BAC library) complete sequence Length = 243316 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 33 tatatactgtgttcaaattt 52 |||||||||||||||||||| Sbjct: 6832 tatatactgtgttcaaattt 6813
>gb|AC106897.5| Homo sapiens BAC clone RP11-279O9 from 4, complete sequence Length = 161572 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 49 atttttgaaaagtctttttgctta 72 ||||||||||||||||||| |||| Sbjct: 23979 atttttgaaaagtctttttactta 23956
>gb|AC150889.3| Medicago truncatula chromosome 7 BAC clone mte1-61j12, complete sequence Length = 116517 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 aggaacggagggagtatata 20 |||||||||||||||||||| Sbjct: 80303 aggaacggagggagtatata 80284
>gb|AE016818.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome V, complete sequence Length = 1519138 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 315 gggccggggcgcggtggcga 334 |||||||||||||||||||| Sbjct: 258201 gggccggggcgcggtggcga 258220
>gb|AC135209.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0071M09, complete sequence Length = 143595 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 4 aacggagggagtatatacga 23 |||||||||||||||||||| Sbjct: 122335 aacggagggagtatatacga 122354
>gb|AC135207.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1261C08, complete sequence Length = 99910 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 4 aacggagggagtatatacga 23 |||||||||||||||||||| Sbjct: 4510 aacggagggagtatatacga 4529
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 aggaacggagggagtatata 20 |||||||||||||||||||| Sbjct: 11407735 aggaacggagggagtatata 11407716
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 aggaacggagggagtatata 20 |||||||||||||||||||| Sbjct: 16009216 aggaacggagggagtatata 16009197 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 2 ggaacggagggagtatatac 21 |||||||||||||||||||| Sbjct: 2325575 ggaacggagggagtatatac 2325594
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 aacggagggagtatatacga 23 |||||||||||||||||||| Sbjct: 17304151 aacggagggagtatatacga 17304132
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 aggaacggagggagtatata 20 |||||||||||||||||||| Sbjct: 23619993 aggaacggagggagtatata 23619974
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 4 aacggagggagtatatacga 23 |||||||||||||||||||| Sbjct: 8995309 aacggagggagtatatacga 8995328
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 aggaacggagggagtatata 20 |||||||||||||||||||| Sbjct: 25882565 aggaacggagggagtatata 25882546 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 aggaacggagggagtatata 20 |||||||||||||||||||| Sbjct: 7581206 aggaacggagggagtatata 7581225
>gb|AF340167.1|AF340167 Streptomyces verticillus polyketide synthase gene, partial cds Length = 6219 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 317 gccggggcgcggtggcgagc 336 |||||||||||||||||||| Sbjct: 1278 gccggggcgcggtggcgagc 1259
>dbj|AP005261.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0640E12 Length = 167353 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 aacggagggagtatatacga 23 |||||||||||||||||||| Sbjct: 109276 aacggagggagtatatacga 109257
>dbj|AP004375.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0475C12 Length = 140863 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 aggaacggagggagtatata 20 |||||||||||||||||||| Sbjct: 81255 aggaacggagggagtatata 81236
>dbj|AP006526.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0591A03 Length = 147043 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 aggaacggagggagtatata 20 |||||||||||||||||||| Sbjct: 41423 aggaacggagggagtatata 41404
>dbj|AP004070.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1705_E12 Length = 191416 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 aggaacggagggagtatata 20 |||||||||||||||||||| Sbjct: 174912 aggaacggagggagtatata 174931
>dbj|AP005291.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1282_H11 Length = 143314 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 aggaacggagggagtatata 20 |||||||||||||||||||| Sbjct: 33906 aggaacggagggagtatata 33887
>gb|AE005086.1| Halobacterium sp. NRC-1 section 117 of 170 of the complete genome Length = 11548 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 241 tcgacgacggtgtcgatggcgcgc 264 |||||| ||||||||||||||||| Sbjct: 1338 tcgacggcggtgtcgatggcgcgc 1361
>gb|AC153382.1| Mus musculus 10 BAC RP23-9F3 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 206125 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 33 tatatactgtgttcaaattt 52 |||||||||||||||||||| Sbjct: 166976 tatatactgtgttcaaattt 166995
>dbj|AP004381.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0025F03 Length = 138042 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 2 ggaacggagggagtatatac 21 |||||||||||||||||||| Sbjct: 1545 ggaacggagggagtatatac 1564
>dbj|AP005542.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0473D02 Length = 146185 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 2 ggaacggagggagtatatac 21 |||||||||||||||||||| Sbjct: 73074 ggaacggagggagtatatac 73093
>emb|AJ438168.1|HSA438168 Halobacterium salinarum basB gene for amino acid binding protein Length = 1242 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 241 tcgacgacggtgtcgatggcgcgc 264 |||||| ||||||||||||||||| Sbjct: 191 tcgacggcggtgtcgatggcgcgc 168
>ref|NM_210013.1| Eremothecium gossypii AEL201Wp (AEL201W), mRNA Length = 1725 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 315 gggccggggcgcggtggcga 334 |||||||||||||||||||| Sbjct: 262 gggccggggcgcggtggcga 281
>gb|AY110228.1| Zea mays CL32412_1 mRNA sequence Length = 1199 Score = 40.1 bits (20), Expect = 6.5 Identities = 47/56 (83%) Strand = Plus / Plus Query: 360 cgcgaagaaggcgtccttgctgcgcgcgaactgcctcacgatgggcgccgtggtgc 415 |||||||||| |||| | |||| ||||||||| ||||||||||||||||||| Sbjct: 310 cgcgaagaagtcgtcttggctggccgcgaactggtcgacgatgggcgccgtggtgc 365
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 308 tgccgccgggccggggcgcggtgg 331 ||||||||||||| |||||||||| Sbjct: 4487536 tgccgccgggccgcggcgcggtgg 4487513
>gb|AC154128.3| Tribolium castaneum BAC T.cast_C36A24 (Clemson University Genomics Institute Tribolium castaneum BAC Library (Red Flour Beetle)) complete sequence Length = 154107 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 atttttgaaaagtctttttg 68 |||||||||||||||||||| Sbjct: 103295 atttttgaaaagtctttttg 103314
>emb|CR382129.1| Yarrowia lipolytica chromosome C of strain CLIB122 of Yarrowia lipolytica Length = 3272609 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 279 gaagcagctgcgacggatct 298 |||||||||||||||||||| Sbjct: 2560071 gaagcagctgcgacggatct 2560052
>dbj|AP006655.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT09O10, TM0341, complete sequence Length = 69777 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 aggaacggagggagtatata 20 |||||||||||||||||||| Sbjct: 37663 aggaacggagggagtatata 37644
>dbj|AP006347.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT02G18, TM0334a, complete sequence Length = 77969 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 aggaacggagggagtatata 20 |||||||||||||||||||| Sbjct: 40804 aggaacggagggagtatata 40823
>dbj|AP006100.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT03D07, TM0180b, complete sequence Length = 13371 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 aggaacggagggagtatata 20 |||||||||||||||||||| Sbjct: 10977 aggaacggagggagtatata 10996
>dbj|AP004977.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT12A10, TM0160, complete sequence Length = 74313 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 aggaacggagggagtatata 20 |||||||||||||||||||| Sbjct: 42573 aggaacggagggagtatata 42554
>gb|U11701.1|HSU11701 Human LIM-homeobox domain protein (hLH-2) mRNA, complete cds Length = 1887 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 315 gggccggggcgcggtggcga 334 |||||||||||||||||||| Sbjct: 377 gggccggggcgcggtggcga 396 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,645,006 Number of Sequences: 3902068 Number of extensions: 3645006 Number of successful extensions: 90725 Number of sequences better than 10.0: 98 Number of HSP's better than 10.0 without gapping: 101 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 88907 Number of HSP's gapped (non-prelim): 1802 length of query: 482 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 460 effective length of database: 17,147,199,772 effective search space: 7887711895120 effective search space used: 7887711895120 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)