>AXL2_YEAST (P38928) Protein AXL2 precursor (Suppressor of RHO3 protein 4)|
          Length = 823

 Score = 34.7 bits (78), Expect = 0.13
 Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
 Frame = +2

Query: 50  KVEHSPHSNNATATITTHHLSWSWPYPKVEH-ADVSGSTRAGTRYFRPWAPFALKLAPVA 226
           K+ HS HS NAT+T ++HH + +  Y    + A +S ++ A T      AP AL   P A
Sbjct: 442 KITHSNHSANATSTRSSHHSTSTSSYTSSTYTAKISSTSAAATSS----APAAL---PAA 494

Query: 227 GSTSS 241
             TSS
Sbjct: 495 NKTSS 499

>PRDM1_MOUSE (Q60636) PR domain zinc finger protein 1 (PR domain-containing|
           protein 1) (Beta-interferon gene positive-regulatory
           domain I-binding factor) (BLIMP-1)
          Length = 856

 Score = 30.4 bits (67), Expect = 2.5
 Identities = 17/38 (44%), Positives = 23/38 (60%)
 Frame = -2

Query: 282 GVYGKGAYPGYAGSLLVDPATGASFNANGAHGRKYLVP 169
           G  G G+YPGYA +  + PA   S+N   AH  K+L+P
Sbjct: 414 GSEGLGSYPGYAPAPHLPPAFIPSYN---AHYPKFLLP 448

>PRDM1_HUMAN (O75626) PR domain zinc finger protein 1 (PR domain-containing|
           protein 1) (Beta-interferon gene positive-regulatory
           domain I-binding factor) (BLIMP-1) (Positive regulatory
           domain I-binding factor 1) (PRDI-binding factor 1)
           (PRDI-BF1)
          Length = 789

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 17/38 (44%), Positives = 22/38 (57%)
 Frame = -2

Query: 282 GVYGKGAYPGYAGSLLVDPATGASFNANGAHGRKYLVP 169
           G  G G+YPGYA    + PA   S+N   AH  K+L+P
Sbjct: 346 GTEGLGSYPGYAPLPHLPPAFIPSYN---AHYPKFLLP 380

>HXA9_HUMAN (P31269) Homeobox protein Hox-A9 (Hox-1G)|
          Length = 272

 Score = 29.6 bits (65), Expect = 4.3
 Identities = 20/77 (25%), Positives = 31/77 (40%)
 Frame = +2

Query: 17  QAHGLILARAWKVEHSPHSNNATATITTHHLSWSWPYPKVEHADVSGSTRAGTRYFRPWA 196
           Q+   +   +W   H+  +N   A +  HH    + +P+   A V+ +   G RY R W 
Sbjct: 57  QSKATVFGASWNPVHAAGANAVPAAVYHHHHHHPYVHPQ---APVAAAAPDG-RYMRSWL 112

Query: 197 PFALKLAPVAGSTSSEP 247
                    AG  SS P
Sbjct: 113 EPTPGALSFAGLPSSRP 129

>AKT5_ARATH (Q9SCX5) Probable potassium channel AKT5|
          Length = 880

 Score = 29.3 bits (64), Expect = 5.6
 Identities = 14/34 (41%), Positives = 20/34 (58%)
 Frame = +1

Query: 130 QGGACGRVGVDEGRDQVLPAVGSVRVEAGAGGRV 231
           +GGA  R G+ EG   V PA  ++  EA + G+V
Sbjct: 796 EGGASTRTGISEGVGGVYPARVTISGEASSSGKV 829

>GCSP_NITWN (Q3ST46) Glycine dehydrogenase [decarboxylating] (EC 1.4.4.2)|
            (Glycine decarboxylase) (Glycine cleavage system
            P-protein)
          Length = 954

 Score = 29.3 bits (64), Expect = 5.6
 Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
 Frame = +2

Query: 32   ILARAWKVEHSPHSNNATATITTHHLS---WSWPYPKVEHADVSGSTRAGTRYFRP 190
            I A  WKVE SP  +   A  T H ++   WS PY + +    SGS+R+  +Y+ P
Sbjct: 875  IEAGRWKVEASPLRH---APHTAHDIADDAWSRPYSRAQGCFPSGSSRS-DKYWCP 926

>INO80_GIBZE (Q4IL82) Putative DNA helicase INO80 (EC 3.6.1.-)|
          Length = 1904

 Score = 29.3 bits (64), Expect = 5.6
 Identities = 25/83 (30%), Positives = 35/83 (42%), Gaps = 10/83 (12%)
 Frame = +2

Query: 23  HGLILARAWKVEHSP----------HSNNATATITTHHLSWSWPYPKVEHADVSGSTRAG 172
           H     R+ K E+ P          HS++ T+T + +H   S P P + +  +S ST A 
Sbjct: 73  HSTFSLRSPKPEYRPPPFSSPNGHNHSHHNTSTSSANHSLQSPPRPALPNPYMSSSTGA- 131

Query: 173 TRYFRPWAPFALKLAPVAGSTSS 241
                P  P A  L P  G  SS
Sbjct: 132 -----PGGPVAPALPPPVGINSS 149

>CBID_SYNY3 (P73423) Putative cobalt-precorrin-6A synthase [deacetylating] (EC|
           2.1.1.-)
          Length = 378

 Score = 29.3 bits (64), Expect = 5.6
 Identities = 15/59 (25%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
 Frame = +2

Query: 23  HGLILARAWKVEHSPH--SNNATATITTHHLSWSWPYPKVEHADVSGSTRAGTRYFRPW 193
           HG ++  A  + H+ H  ++     +T   +    PYP V+    + +T AG +  R W
Sbjct: 250 HGKLIKLAGGIFHTHHHLADGRLEILTAQAVQAGLPYPLVQELGQAPTTEAGLKLLRHW 308

>CH601_MYCPA (P60545) 60 kDa chaperonin 1 (Protein Cpn60 1) (groEL protein 1)|
          Length = 538

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = +1

Query: 328 EEAVAEGVGDGADDHGRKRHHH 393
           E AV +   + ADDHG   HHH
Sbjct: 517 ETAVVDKPAEEADDHGHGHHHH 538

>PRMA_HAEIN (P44402) Ribosomal protein L11 methyltransferase (EC 2.1.1.-) (L11|
           Mtase)
          Length = 296

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = -2

Query: 444 PQTAPLAPPNGDVGVDGMVVSLASMIVGTVTNPF 343
           P  + L  PNGD+G+ G++ + A  +  T T  F
Sbjct: 242 PIISQLVKPNGDLGLSGILETQAQSVCDTYTQTF 275


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 55,691,986
Number of Sequences: 219361
Number of extensions: 1074183
Number of successful extensions: 3409
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3273
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3409
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3246866728
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)