>ref|XM_608352.2| PREDICTED: Bos taurus similar to tetratricopeptide repeat domain 18
            (LOC529891), mRNA
          Length = 4048

 Score = 44.1 bits (22), Expect = 0.18
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 28   atcacaatatgtttgggaaactagta 53
            ||||||||||||||||||||| ||||
Sbjct: 1304 atcacaatatgtttgggaaacaagta 1329

>gb|AC166108.4| Mus musculus BAC clone RP23-192E10 from chromosome 1, complete sequence
          Length = 188836

 Score = 42.1 bits (21), Expect = 0.70
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 95    ttgatgtttcttctacaattc 115
             |||||||||||||||||||||
Sbjct: 60495 ttgatgtttcttctacaattc 60475

>gb|AC101813.5| Mus musculus chromosome 1, clone RP24-315D8, complete sequence
          Length = 159286

 Score = 42.1 bits (21), Expect = 0.70
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 95    ttgatgtttcttctacaattc 115
             |||||||||||||||||||||
Sbjct: 69208 ttgatgtttcttctacaattc 69188

>emb|BX000995.12| Mouse DNA sequence from clone RP23-106K17 on chromosome 11 Contains a
              protease pseuodogene, complete sequence
          Length = 189417

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 161    catgagtcaaaattttgtgt 180
              ||||||||||||||||||||
Sbjct: 118307 catgagtcaaaattttgtgt 118326

>gb|AC084703.7| Homo sapiens chromosome 15, clone RP11-1152D21, complete sequence
          Length = 110907

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 167  tcaaaattttgtgtacaatt 186
            ||||||||||||||||||||
Sbjct: 9253 tcaaaattttgtgtacaatt 9272

>emb|BX296541.5| Zebrafish DNA sequence from clone CH211-278P9, complete sequence
          Length = 157802

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 18     ggtattgtaaatcacaatatgttt 41
              ||||||||| ||||||||||||||
Sbjct: 143235 ggtattgtacatcacaatatgttt 143258

>gb|AC066692.3| Homo sapiens BAC clone RP11-424C23 from 2, complete sequence
          Length = 175028

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 35    tatgtttgggaaactagtac 54
             ||||||||||||||||||||
Sbjct: 67909 tatgtttgggaaactagtac 67890

>gb|AC013752.10| Homo sapiens chromosome 15, clone RP11-396J17, complete sequence
          Length = 183794

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 167    tcaaaattttgtgtacaatt 186
              ||||||||||||||||||||
Sbjct: 110246 tcaaaattttgtgtacaatt 110265

>emb|BX005013.8| Zebrafish DNA sequence from clone DKEY-238G8 in linkage group 17,
            complete sequence
          Length = 164864

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 18   ggtattgtaaatcacaatatgttt 41
            ||||||||| ||||||||||||||
Sbjct: 3404 ggtattgtacatcacaatatgttt 3381

>emb|AL136120.8| Human DNA sequence from clone RP5-975D15 on chromosome 1p31.3-32.2
            Contains the GADD45A gene for growth arrest and
            DNA-damage-inducible alpha, the 3' end of the GNG12 gene
            for guanine nucleotide binding protein (G protein) gamma
            12 and a CpG island, complete sequence
          Length = 104198

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 59   caacaagtatcacctcagaa 78
            ||||||||||||||||||||
Sbjct: 3763 caacaagtatcacctcagaa 3782


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,923,884
Number of Sequences: 3902068
Number of extensions: 1923884
Number of successful extensions: 128070
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 128042
Number of HSP's gapped (non-prelim): 28
length of query: 218
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 196
effective length of database: 17,147,199,772
effective search space: 3360851155312
effective search space used: 3360851155312
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)