ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart48a09 |
|---|---|
| Clone Library Name | barley_pub |
>AATC_ORYSA (P37833) Aspartate aminotransferase, cytoplasmic (EC 2.6.1.1)| (Transaminase A) Length = 407 Score = 60.8 bits (146), Expect = 8e-10 Identities = 29/31 (93%), Positives = 30/31 (96%) Frame = -2 Query: 326 TSDGRISMAGLSSRTVPHLADAIHAAVTKLK 234 TSDGRISMAGLS RT+PHLADAIHAAVTKLK Sbjct: 377 TSDGRISMAGLSGRTIPHLADAIHAAVTKLK 407
>AATC_DAUCA (P28734) Aspartate aminotransferase, cytoplasmic (EC 2.6.1.1)| (Transaminase A) Length = 405 Score = 57.4 bits (137), Expect = 9e-09 Identities = 28/28 (100%), Positives = 28/28 (100%) Frame = -2 Query: 326 TSDGRISMAGLSSRTVPHLADAIHAAVT 243 TSDGRISMAGLSSRTVPHLADAIHAAVT Sbjct: 375 TSDGRISMAGLSSRTVPHLADAIHAAVT 402
>AAT2_ARATH (P46645) Aspartate aminotransferase, cytoplasmic isozyme 1 (EC| 2.6.1.1) (Transaminase A) Length = 405 Score = 57.4 bits (137), Expect = 9e-09 Identities = 27/30 (90%), Positives = 30/30 (100%) Frame = -2 Query: 326 TSDGRISMAGLSSRTVPHLADAIHAAVTKL 237 TSDGRISMAGLSS+TVPHLADA+HAAVT+L Sbjct: 375 TSDGRISMAGLSSKTVPHLADAMHAAVTRL 404
>AAT3_ARATH (P46644) Aspartate aminotransferase, chloroplast precursor (EC| 2.6.1.1) (Transaminase A) Length = 449 Score = 56.6 bits (135), Expect = 2e-08 Identities = 27/29 (93%), Positives = 28/29 (96%) Frame = -2 Query: 326 TSDGRISMAGLSSRTVPHLADAIHAAVTK 240 TSDGRISMAGLSS+TVPHLADAIHA VTK Sbjct: 419 TSDGRISMAGLSSKTVPHLADAIHAVVTK 447
>AAT1_MEDSA (P28011) Aspartate aminotransferase 1 (EC 2.6.1.1) (Transaminase A)| Length = 418 Score = 53.1 bits (126), Expect = 2e-07 Identities = 25/30 (83%), Positives = 28/30 (93%) Frame = -2 Query: 326 TSDGRISMAGLSSRTVPHLADAIHAAVTKL 237 TSDGRISMAGLSS+TVPHLA AIHA VT++ Sbjct: 388 TSDGRISMAGLSSKTVPHLAHAIHAVVTRV 417
>AAT4_ARATH (P46646) Aspartate aminotransferase, cytoplasmic isozyme 2 (EC| 2.6.1.1) (Transaminase A) Length = 403 Score = 48.5 bits (114), Expect = 4e-06 Identities = 23/30 (76%), Positives = 26/30 (86%) Frame = -2 Query: 326 TSDGRISMAGLSSRTVPHLADAIHAAVTKL 237 T DGRISMA LSS+TVP LADAIHA VT++ Sbjct: 373 TYDGRISMASLSSKTVPQLADAIHAVVTRI 402
>AATC_CHICK (P00504) Aspartate aminotransferase, cytoplasmic (EC 2.6.1.1)| (Transaminase A) (Glutamate oxaloacetate transaminase 1) Length = 411 Score = 33.5 bits (75), Expect = 0.14 Identities = 13/30 (43%), Positives = 24/30 (80%) Frame = -2 Query: 323 SDGRISMAGLSSRTVPHLADAIHAAVTKLK 234 + GRI+M GL+++ + ++A +IH AVTK++ Sbjct: 382 ASGRINMCGLTTKNLDYVAKSIHEAVTKIQ 411
>AATM_HUMAN (P00505) Aspartate aminotransferase, mitochondrial precursor (EC| 2.6.1.1) (Transaminase A) (Glutamate oxaloacetate transaminase 2) Length = 430 Score = 33.1 bits (74), Expect = 0.18 Identities = 18/29 (62%), Positives = 22/29 (75%) Frame = -2 Query: 326 TSDGRISMAGLSSRTVPHLADAIHAAVTK 240 T DGRIS+AG++S V +LA AIH VTK Sbjct: 403 TKDGRISVAGVTSSNVGYLAHAIH-QVTK 430
>AATM_BOVIN (P12344) Aspartate aminotransferase, mitochondrial precursor (EC| 2.6.1.1) (Transaminase A) (Glutamate oxaloacetate transaminase 2) Length = 430 Score = 33.1 bits (74), Expect = 0.18 Identities = 18/29 (62%), Positives = 22/29 (75%) Frame = -2 Query: 326 TSDGRISMAGLSSRTVPHLADAIHAAVTK 240 T DGRIS+AG++S V +LA AIH VTK Sbjct: 403 TKDGRISVAGVTSGNVAYLAHAIH-QVTK 430
>AATC_PIG (P00503) Aspartate aminotransferase, cytoplasmic (EC 2.6.1.1)| (Transaminase A) (Glutamate oxaloacetate transaminase 1) Length = 412 Score = 33.1 bits (74), Expect = 0.18 Identities = 13/28 (46%), Positives = 23/28 (82%) Frame = -2 Query: 317 GRISMAGLSSRTVPHLADAIHAAVTKLK 234 GRI+M GL+++ + ++A +IH AVTK++ Sbjct: 385 GRINMCGLTTKNLDYVATSIHEAVTKIQ 412
>AATC_MOUSE (P05201) Aspartate aminotransferase, cytoplasmic (EC 2.6.1.1)| (Transaminase A) (Glutamate oxaloacetate transaminase 1) Length = 412 Score = 33.1 bits (74), Expect = 0.18 Identities = 13/28 (46%), Positives = 23/28 (82%) Frame = -2 Query: 317 GRISMAGLSSRTVPHLADAIHAAVTKLK 234 GRI+M GL+++ + ++A +IH AVTK++ Sbjct: 385 GRINMCGLTTKNLDYVATSIHEAVTKIQ 412
>AATC_BOVIN (P33097) Aspartate aminotransferase, cytoplasmic (EC 2.6.1.1)| (Transaminase A) (Glutamate oxaloacetate transaminase 1) Length = 412 Score = 33.1 bits (74), Expect = 0.18 Identities = 13/28 (46%), Positives = 23/28 (82%) Frame = -2 Query: 317 GRISMAGLSSRTVPHLADAIHAAVTKLK 234 GRI+M GL+++ + ++A +IH AVTK++ Sbjct: 385 GRINMCGLTTKNLEYVATSIHEAVTKIQ 412
>AATM_CHICK (P00508) Aspartate aminotransferase, mitochondrial precursor (EC| 2.6.1.1) (Transaminase A) (Glutamate oxaloacetate transaminase 2) Length = 423 Score = 33.1 bits (74), Expect = 0.18 Identities = 18/29 (62%), Positives = 22/29 (75%) Frame = -2 Query: 326 TSDGRISMAGLSSRTVPHLADAIHAAVTK 240 T DGRIS+AG++S V +LA AIH VTK Sbjct: 396 TKDGRISVAGVASSNVGYLAHAIH-QVTK 423
>AATM_HORSE (P08907) Aspartate aminotransferase, mitochondrial (EC 2.6.1.1)| (Transaminase A) (Glutamate oxaloacetate transaminase 2) Length = 401 Score = 32.7 bits (73), Expect = 0.23 Identities = 18/29 (62%), Positives = 22/29 (75%) Frame = -2 Query: 326 TSDGRISMAGLSSRTVPHLADAIHAAVTK 240 T DGRIS+AG++S V +LA AIH VTK Sbjct: 374 TKDGRISVAGVTSGNVGYLAHAIH-QVTK 401
>AATM_RAT (P00507) Aspartate aminotransferase, mitochondrial precursor (EC| 2.6.1.1) (Transaminase A) (Glutamate oxaloacetate transaminase 2) Length = 430 Score = 32.7 bits (73), Expect = 0.23 Identities = 18/29 (62%), Positives = 22/29 (75%) Frame = -2 Query: 326 TSDGRISMAGLSSRTVPHLADAIHAAVTK 240 T DGRIS+AG++S V +LA AIH VTK Sbjct: 403 TKDGRISVAGVTSGNVGYLAHAIH-QVTK 430
>AATM_PIG (P00506) Aspartate aminotransferase, mitochondrial precursor (EC| 2.6.1.1) (Transaminase A) (Glutamate oxaloacetate transaminase 2) Length = 430 Score = 32.7 bits (73), Expect = 0.23 Identities = 18/29 (62%), Positives = 22/29 (75%) Frame = -2 Query: 326 TSDGRISMAGLSSRTVPHLADAIHAAVTK 240 T DGRIS+AG++S V +LA AIH VTK Sbjct: 403 TKDGRISVAGVTSGNVGYLAHAIH-QVTK 430
>AATM_MOUSE (P05202) Aspartate aminotransferase, mitochondrial precursor (EC| 2.6.1.1) (Transaminase A) (Glutamate oxaloacetate transaminase 2) Length = 430 Score = 32.7 bits (73), Expect = 0.23 Identities = 18/29 (62%), Positives = 22/29 (75%) Frame = -2 Query: 326 TSDGRISMAGLSSRTVPHLADAIHAAVTK 240 T DGRIS+AG++S V +LA AIH VTK Sbjct: 403 TKDGRISVAGVTSGNVGYLAHAIH-QVTK 430
>AATC_HORSE (P08906) Aspartate aminotransferase, cytoplasmic (EC 2.6.1.1)| (Transaminase A) (Glutamate oxaloacetate transaminase 1) Length = 412 Score = 32.3 bits (72), Expect = 0.30 Identities = 13/28 (46%), Positives = 22/28 (78%) Frame = -2 Query: 317 GRISMAGLSSRTVPHLADAIHAAVTKLK 234 GRI+M GL+++ + ++A +IH AVTK + Sbjct: 385 GRINMCGLTTKNLDYVATSIHEAVTKFQ 412
>DHSB_YEAST (P21801) Succinate dehydrogenase [ubiquinone] iron-sulfur protein,| mitochondrial precursor (EC 1.3.5.1) (IP) Length = 266 Score = 32.3 bits (72), Expect = 0.30 Identities = 13/37 (35%), Positives = 24/37 (64%) Frame = -1 Query: 243 KTEVNDNMATPFRNKILNCLQQCPKGSTRGVLLAELR 133 K +N++M+ + I+NC + CPKG G+ +AE++ Sbjct: 224 KAMLNNSMSLYRCHTIMNCTRTCPKGLNPGLAIAEIK 260
>AATC_HUMAN (P17174) Aspartate aminotransferase, cytoplasmic (EC 2.6.1.1)| (Transaminase A) (Glutamate oxaloacetate transaminase 1) Length = 412 Score = 32.0 bits (71), Expect = 0.40 Identities = 12/28 (42%), Positives = 24/28 (85%) Frame = -2 Query: 317 GRISMAGLSSRTVPHLADAIHAAVTKLK 234 GRI+++GL+++ + ++A +IH AVTK++ Sbjct: 385 GRINVSGLTTKNLDYVATSIHEAVTKIQ 412
>AAT1_ARATH (P46643) Aspartate aminotransferase, mitochondrial precursor (EC| 2.6.1.1) (Transaminase A) Length = 430 Score = 31.6 bits (70), Expect = 0.52 Identities = 17/29 (58%), Positives = 23/29 (79%) Frame = -2 Query: 326 TSDGRISMAGLSSRTVPHLADAIHAAVTK 240 T +GRISMAG+++ V +LA+AIH VTK Sbjct: 401 TRNGRISMAGVTTGNVGYLANAIH-EVTK 428
>DHSB_MOUSE (Q9CQA3) Succinate dehydrogenase [ubiquinone] iron-sulfur protein,| mitochondrial precursor (EC 1.3.5.1) (Ip) (Iron-sulfur subunit of complex II) Length = 282 Score = 31.6 bits (70), Expect = 0.52 Identities = 18/56 (32%), Positives = 24/56 (42%) Frame = -1 Query: 294 ELQDCTPSCRCHTCCGYKTEVNDNMATPFRNKILNCLQQCPKGSTRGVLLAELRNL 127 +LQD RCHT I+NC Q CPKG G +AE++ + Sbjct: 235 KLQDPFSVYRCHT-------------------IMNCTQTCPKGLNPGKAIAEIKKM 271
>AAT5_ARATH (P46248) Aspartate aminotransferase, chloroplast precursor (EC| 2.6.1.1) (Transaminase A) Length = 453 Score = 30.8 bits (68), Expect = 0.89 Identities = 15/23 (65%), Positives = 17/23 (73%) Frame = -2 Query: 326 TSDGRISMAGLSSRTVPHLADAI 258 T DGRIS+AGLS +LADAI Sbjct: 423 TKDGRISLAGLSLAKCEYLADAI 445
>AATM_LUPAN (P26563) Aspartate aminotransferase-P2, mitochondrial precursor (EC| 2.6.1.1) (Transaminase A) (Fragment) Length = 454 Score = 30.8 bits (68), Expect = 0.89 Identities = 15/23 (65%), Positives = 17/23 (73%) Frame = -2 Query: 326 TSDGRISMAGLSSRTVPHLADAI 258 T DGRIS+AGLS +LADAI Sbjct: 424 TKDGRISLAGLSLAKCEYLADAI 446
>DHSB_MYCGR (O42772) Succinate dehydrogenase [ubiquinone] iron-sulfur protein,| mitochondrial precursor (EC 1.3.5.1) (IP) Length = 297 Score = 30.4 bits (67), Expect = 1.2 Identities = 13/37 (35%), Positives = 23/37 (62%) Frame = -1 Query: 243 KTEVNDNMATPFRNKILNCLQQCPKGSTRGVLLAELR 133 K +N++M+ + ILNC + CPKG + +AE++ Sbjct: 254 KDALNNSMSLYRCHTILNCSRTCPKGLNPALAIAEIK 290
>DHSB_HUMAN (P21912) Succinate dehydrogenase [ubiquinone] iron-sulfur protein,| mitochondrial precursor (EC 1.3.5.1) (Ip) (Iron-sulfur subunit of complex II) Length = 280 Score = 30.0 bits (66), Expect = 1.5 Identities = 17/56 (30%), Positives = 24/56 (42%) Frame = -1 Query: 294 ELQDCTPSCRCHTCCGYKTEVNDNMATPFRNKILNCLQQCPKGSTRGVLLAELRNL 127 +LQD RCHT I+NC + CPKG G +AE++ + Sbjct: 233 KLQDPFSLYRCHT-------------------IMNCTRTCPKGLNPGKAIAEIKKM 269
>DHSB_ASHGO (Q75CI4) Succinate dehydrogenase [ubiquinone] iron-sulfur protein,| mitochondrial precursor (EC 1.3.5.1) (IP) Length = 261 Score = 30.0 bits (66), Expect = 1.5 Identities = 17/56 (30%), Positives = 24/56 (42%) Frame = -1 Query: 300 RFELQDCTPSCRCHTCCGYKTEVNDNMATPFRNKILNCLQQCPKGSTRGVLLAELR 133 R +LQ+ RCHT I+NC + CPKG G +AE++ Sbjct: 219 REQLQNAMSVYRCHT-------------------IMNCTRTCPKGLNPGKAIAEIK 255
>AATC_RAT (P13221) Aspartate aminotransferase, cytoplasmic (EC 2.6.1.1)| (Transaminase A) (Glutamate oxaloacetate transaminase 1) Length = 412 Score = 29.6 bits (65), Expect = 2.0 Identities = 12/28 (42%), Positives = 22/28 (78%) Frame = -2 Query: 317 GRISMAGLSSRTVPHLADAIHAAVTKLK 234 GRI+M GL+++ + ++A +I+ AVTK + Sbjct: 385 GRINMCGLTTKNLDYVATSINEAVTKFQ 412
>DHSB_SCHPO (P21911) Succinate dehydrogenase [ubiquinone] iron-sulfur protein,| mitochondrial precursor (EC 1.3.5.1) (IP) Length = 252 Score = 29.6 bits (65), Expect = 2.0 Identities = 13/40 (32%), Positives = 25/40 (62%), Gaps = 1/40 (2%) Frame = -1 Query: 243 KTEVNDNMATPFR-NKILNCLQQCPKGSTRGVLLAELRNL 127 + +V N + +R + I+NC + CPKG G+ +A+++ L Sbjct: 209 RLDVMQNSMSVYRCHTIMNCARTCPKGLNPGLAIAKVKAL 248
>DHSB_DROME (P21914) Succinate dehydrogenase [ubiquinone] iron-sulfur protein,| mitochondrial precursor (EC 1.3.5.1) (IP) Length = 297 Score = 29.3 bits (64), Expect = 2.6 Identities = 11/24 (45%), Positives = 16/24 (66%) Frame = -1 Query: 198 ILNCLQQCPKGSTRGVLLAELRNL 127 I+NC + CPKG G +AE++ L Sbjct: 255 IMNCTRTCPKGLNPGRAIAEIKKL 278
>OMD_MOUSE (O35103) Osteomodulin precursor (Osteoadherin) (OSAD) (Keratan| sulfate proteoglycan osteomodulin) (KSPG osteomodulin) Length = 423 Score = 28.9 bits (63), Expect = 3.4 Identities = 14/49 (28%), Positives = 21/49 (42%) Frame = -1 Query: 321 RWEDQHGRFELQDCTPSCRCHTCCGYKTEVNDNMATPFRNKILNCLQQC 175 RW+D + + +D P + H N PF N IL C ++C Sbjct: 26 RWDDDYDQEPNEDYDPEFQFHQ--------NIEYGVPFYNNILGCAKEC 66
>DXR_SYNY3 (Q55663) 1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC| 1.1.1.267) (DXP reductoisomerase) (1-deoxyxylulose-5-phosphate reductoisomerase) (2-C-methyl-D-erythritol 4-phosphate synthase) Length = 394 Score = 28.9 bits (63), Expect = 3.4 Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 5/49 (10%) Frame = -1 Query: 198 ILNCLQQCPKGSTRGVLL----AELRNLPC-RLTKIVV*DSFVHPGLKM 67 I CLQ P+G R ++L R+LP RL + V D+ HP M Sbjct: 158 IFQCLQGVPEGGLRRIILTASGGAFRDLPVERLPFVTVQDALKHPNWSM 206
>DHSB_CANGA (Q6FWS8) Succinate dehydrogenase [ubiquinone] iron-sulfur protein,| mitochondrial precursor (EC 1.3.5.1) (IP) Length = 253 Score = 28.9 bits (63), Expect = 3.4 Identities = 12/37 (32%), Positives = 23/37 (62%) Frame = -1 Query: 243 KTEVNDNMATPFRNKILNCLQQCPKGSTRGVLLAELR 133 +T + ++M+ + I+NC + CPKG G +AE++ Sbjct: 211 RTMLQNSMSLYRCHTIMNCTRTCPKGLNPGRSIAEIK 247
>INSRR_RAT (Q64716) Insulin receptor-related protein precursor (EC 2.7.10.1)| (IRR) (IR-related receptor) (Fragments) Length = 581 Score = 28.9 bits (63), Expect = 3.4 Identities = 21/54 (38%), Positives = 25/54 (46%), Gaps = 12/54 (22%) Frame = -1 Query: 282 CTPSC----------RCHTC--CGYKTEVNDNMATPFRNKILNCLQQCPKGSTR 157 C P+C RC T CG+ EV + AT F +CL QCP G TR Sbjct: 258 CLPACPPGTYQYESWRCVTAELCGHLREVPGH-ATAFGIYEGSCLAQCPPGFTR 310
>CE110_HUMAN (O43303) Centrosomal protein of 110 kDa (Cep110 protein)| Length = 1012 Score = 28.9 bits (63), Expect = 3.4 Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 9/44 (20%) Frame = +1 Query: 208 EGGCHVI---------IHFSFVTAACMASARWGTVLELKPAMLI 312 E G H++ +H + ++ C+AS +GTV LKPA ++ Sbjct: 488 ERGAHIMNSTCAAMPKLHEPYASSQCIASPNFGTVSGLKPASML 531
>HIS4_METAC (Q8TU55) 1-(5-phosphoribosyl)-5-[(5-| phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase (EC 5.3.1.16) (Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase) Length = 245 Score = 28.1 bits (61), Expect = 5.7 Identities = 14/48 (29%), Positives = 23/48 (47%) Frame = +2 Query: 89 KLSQTTILVSLQGKFLSSANNTPLVEPFGHCCRQFKILLRKGVAMLSF 232 K ++T LV L G N P++E CR+ + ++ G + SF Sbjct: 44 KGAKTLHLVDLDGAIEGERKNAPIIEKIVQACREKGVSIQVGGGIRSF 91
>EXO70_CANGA (Q6FJW2) Exocyst complex protein EXO70| Length = 623 Score = 28.1 bits (61), Expect = 5.7 Identities = 14/45 (31%), Positives = 26/45 (57%) Frame = +2 Query: 92 LSQTTILVSLQGKFLSSANNTPLVEPFGHCCRQFKILLRKGVAML 226 L++ +L +LQ S+ N+ V+ + + ++LLRKG+A L Sbjct: 50 LARNNVLKTLQRNIDSTLNSVASVKDLANEASKHEVLLRKGIASL 94
>HEMA_IADA2 (P03446) Hemagglutinin precursor [Contains: Hemagglutinin HA1| chain; Hemagglutinin HA2 chain] Length = 564 Score = 28.1 bits (61), Expect = 5.7 Identities = 22/63 (34%), Positives = 31/63 (49%), Gaps = 2/63 (3%) Frame = -1 Query: 306 HGRFELQDCTPSCRCHTCCGYKTEVNDNMATPFRNKILNCLQQCPKGSTRG--VLLAELR 133 HGR L++ P +C T C V N + PF+N + + +CPK G L LR Sbjct: 277 HGRI-LKNNLPMGQCVTECQLNEGVM-NTSKPFQNTSKHYIGKCPKYIPSGSLKLAIGLR 334 Query: 132 NLP 124 N+P Sbjct: 335 NVP 337
>HIS4_METMA (Q8PWS2) 1-(5-phosphoribosyl)-5-[(5-| phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase (EC 5.3.1.16) (Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase) Length = 246 Score = 27.7 bits (60), Expect = 7.5 Identities = 13/49 (26%), Positives = 26/49 (53%) Frame = +2 Query: 86 TKLSQTTILVSLQGKFLSSANNTPLVEPFGHCCRQFKILLRKGVAMLSF 232 +K ++T LV L G N+P++E + C++ + ++ G + SF Sbjct: 43 SKGAKTLHLVDLDGAIEGERKNSPIIEKIVNTCKEKGVSIQVGGGIRSF 91
>BCK2_YEAST (P33306) Protein BCK2 (Bypass of kinase C protein)| Length = 851 Score = 27.7 bits (60), Expect = 7.5 Identities = 15/37 (40%), Positives = 21/37 (56%) Frame = +1 Query: 58 NHHHL*SGVNKTVSDNNFSKSTRQIPEFSQ*HASG*T 168 +HHH S VN T S + S + +IP + + ASG T Sbjct: 5 SHHHRSSSVNSTKSRSTESTNKWKIPHYYRRSASGST 41
>SLAP_BACTI (P35826) S-layer protein precursor (Surface layer protein)| (Fragment) Length = 393 Score = 27.3 bits (59), Expect = 9.8 Identities = 10/27 (37%), Positives = 15/27 (55%) Frame = -1 Query: 255 CCGYKTEVNDNMATPFRNKILNCLQQC 175 CC T+VN N+ PF + +N + C Sbjct: 108 CCSAPTKVNSNVTKPFFSFAVNFVSSC 134
>VEMP_CVH22 (P19741) Envelope protein (Protein 5B)| Length = 77 Score = 27.3 bits (59), Expect = 9.8 Identities = 12/31 (38%), Positives = 15/31 (48%) Frame = +3 Query: 222 CYHSLQFCNRSMYGICKMGYSPGAQTCHADP 314 C+ FCNR++YG K Y H DP Sbjct: 39 CFTCHMFCNRTVYGPIKNVYHIYQSYMHIDP 69
>DHSB_PARDE (Q59662) Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)| Length = 259 Score = 27.3 bits (59), Expect = 9.8 Identities = 11/38 (28%), Positives = 21/38 (55%), Gaps = 4/38 (10%) Frame = -1 Query: 228 DNMATPFR----NKILNCLQQCPKGSTRGVLLAELRNL 127 D++ PF+ + I+NC CPKG +A ++++ Sbjct: 216 DSLEDPFKLYRCHTIMNCTNTCPKGLNPAKAIASIKHM 253
>DXR_SYNEL (Q8DK30) 1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC| 1.1.1.267) (DXP reductoisomerase) (1-deoxyxylulose-5-phosphate reductoisomerase) (2-C-methyl-D-erythritol 4-phosphate synthase) Length = 413 Score = 27.3 bits (59), Expect = 9.8 Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 5/49 (10%) Frame = -1 Query: 198 ILNCLQQCPKGSTRGVLL----AELRNLPC-RLTKIVV*DSFVHPGLKM 67 I CLQ P+G R ++L R+ P +L ++ V D+ HP M Sbjct: 174 IFQCLQGVPEGGLRKIILTASGGAFRDWPVEKLAQVTVADALKHPNWSM 222 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 49,968,984 Number of Sequences: 219361 Number of extensions: 955000 Number of successful extensions: 2594 Number of sequences better than 10.0: 44 Number of HSP's better than 10.0 without gapping: 2499 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2593 length of database: 80,573,946 effective HSP length: 84 effective length of database: 62,147,622 effective search space used: 1491542928 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
