ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart48a09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT009009.1| Triticum aestivum clone wdk3c.pk005.b17:fis, full... 416 e-113
2gb|BT016540.1| Zea mays clone Contig373 mRNA sequence 105 9e-20
3gb|BT016854.1| Zea mays clone Contig687 mRNA sequence 105 9e-20
4gb|AY103658.1| Zea mays PCO118382 mRNA sequence 105 9e-20
5dbj|AB110193.1| Oryza sativa (japonica cultivar-group) mRNA for ... 84 3e-13
6dbj|D14673.1|RICAAT Oryza sativa (japonica cultivar-group) mRNA ... 84 3e-13
7dbj|AK104829.1| Oryza sativa (japonica cultivar-group) cDNA clon... 84 3e-13
8dbj|AK103586.1| Oryza sativa (japonica cultivar-group) cDNA clon... 84 3e-13
9dbj|AK103133.1| Oryza sativa (japonica cultivar-group) cDNA clon... 84 3e-13
10dbj|AK099338.1| Oryza sativa (japonica cultivar-group) cDNA clon... 84 3e-13
11dbj|AK067557.1| Oryza sativa (japonica cultivar-group) cDNA clon... 84 3e-13
12emb|X63429.1|PMAAT2 P.miliaceum mRNA for aspartate aminotransfer... 82 1e-12
13ref|XM_463436.1| Oryza sativa (japonica cultivar-group), predic... 74 3e-10
14dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 70 5e-09
15dbj|AP003274.4| Oryza sativa (japonica cultivar-group) genomic D... 70 5e-09
16dbj|AP003256.3| Oryza sativa (japonica cultivar-group) genomic D... 70 5e-09
17dbj|D25322.1|PNIAATA Panicum miliaceum gene for cytosolic aspart... 68 2e-08
18gb|AF470320.1| Musa acuminata aspartate aminotransferase 2 mRNA,... 66 8e-08
19gb|AF470319.1| Musa acuminata aspartate aminotransferase 1 mRNA,... 66 8e-08
20gb|M92660.1|DARAAT Daucus carota aspartate aminotransferase (cyt... 64 3e-07
21emb|X61577.1|MSAAT1MR M.sativa aat-1 mRNA for aspartate aminotra... 62 1e-06
22gb|DQ455441.1| Medicago truncatula cDNA-AFLP fragment BT32M32_38... 62 1e-06
23emb|X94184.1|LJAAT L.japonicus mRNA for aspartate aminotransferase 54 3e-04
24gb|AF034210.1|AF034210 Glycine max aspartate aminotransferase gl... 46 0.070
25gb|L25334.1|ALFAAT1A Medicago sativa aspartate aminotransferase ... 44 0.28
26gb|AC152493.3| Rhinolophus ferrumequinum clone VMRC7-244O22, com... 42 1.1
27gb|CP000077.1| Sulfolobus acidocaldarius DSM 639, complete genome 42 1.1
28dbj|AK038675.1| Mus musculus adult male hypothalamus cDNA, RIKEN... 42 1.1
29gb|AF187872.1|AF187872 Cavia porcellus inwardly-rectifying potas... 42 1.1
30gb|DP000028.1| Rhinolophus ferrumequinum target 1 genomic scaffold 42 1.1
31gb|AC153827.5| Mus musculus 6 BAC RP23-58O24 (Roswell Park Cance... 42 1.1
32gb|AC153875.3| Mus musculus 6 BAC RP23-218N14 (Roswell Park Canc... 42 1.1
33gb|U33846.1|SAU33846 Sulfolobus acidocaldarius DNA polymerase ge... 42 1.1
34gb|AC158921.17| Mus musculus chromosome 15, clone RP23-120K5, co... 42 1.1
35gb|M92094.1|LUPAATP1A L.angustifolius aspartate aminotransferase... 42 1.1
36gb|AC122238.4| Mus musculus BAC clone RP23-143D4 from chromosome... 40 4.3
37gb|AC183752.3| Rhinolophus ferrumequinum clone VMRC7-380K18, com... 40 4.3
38gb|AC136507.19| Medicago truncatula clone mth2-24o19, complete s... 40 4.3
39gb|AC146941.8| Medicago truncatula clone mth2-133o10, complete s... 40 4.3
40emb|AL137139.9| Human DNA sequence from clone RP11-134O15 on chr... 40 4.3
41gb|AC084116.7| Homo sapiens chromosome 8, clone RP11-103H7, comp... 40 4.3
42emb|AL714011.12| Mouse DNA sequence from clone RP23-380O17 on ch... 40 4.3
43gb|AC104384.3| Homo sapiens chromosome 8, clone CTD-2381M20, com... 40 4.3
44gb|AC087808.2| Homo sapiens chromosome 8, clone RP11-89A16, comp... 40 4.3
45gb|AC021396.6|AC021396 Homo sapiens, clone RP11-28I2, complete s... 40 4.3
46emb|BX248117.9| Zebrafish DNA sequence from clone CH211-226D5, c... 40 4.3
47gb|AC157768.4| Mus musculus chromosome 1, clone RP24-308M3, comp... 40 4.3 
>gb|BT009009.1| Triticum aestivum clone wdk3c.pk005.b17:fis, full insert mRNA
            sequence
          Length = 1620

 Score =  416 bits (210), Expect = e-113
 Identities = 298/326 (91%), Gaps = 1/326 (0%)
 Strand = Plus / Minus

                                                                        
Query: 3    acctcagcattcaagggtaagaaa-gcatcacaactgcagcttattcgggattcaaaatc 61
            |||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||
Sbjct: 1505 acctcagcattcaagggtaagaaaagcatcacaactgcagcttattcgggattcgaaatc 1446

                                                                        
Query: 62   accatcatctttaatccggggtgaacaaaactgtctcagacaacaattttagtaagtcta 121
            ||||| ||||||||||||| ||| |||||||||||||||||||||| |||| | ||||||
Sbjct: 1445 accataatctttaatccggtgtgtacaaaactgtctcagacaacaagtttaatgagtcta 1386

                                                                        
Query: 122  caaggcaaattcctgagttcagccaataacacgcctctggttgaacccttcggacactgc 181
            ||||||||||||  ||||||||||| |||||| ||||||||||||||| ||||| |||||
Sbjct: 1385 caaggcaaattctcgagttcagccagtaacacacctctggttgaacccctcggaaactgc 1326

                                                                        
Query: 182  tgtaggcaatttaagattttattgcggaagggggttgccatgttatcattcacttcagtt 241
            |||||  |||| |||||||||||| |  |||||||||  |||||||||||||||||||||
Sbjct: 1325 tgtagagaattcaagattttattgtgcgagggggttgaaatgttatcattcacttcagtt 1266

                                                                        
Query: 242  ttgtaaccgcagcatgtatggcatctgcaagatggggtacagtcctggagctcaaacctg 301
            |||| || || |||||||||||||||||||||||||||||||| |||||||||||||| |
Sbjct: 1265 ttgttactgcggcatgtatggcatctgcaagatggggtacagttctggagctcaaaccgg 1206

                                      
Query: 302  ccatgctgatcctcccatcggatgtc 327
            ||||||||||||||||||| ||||||
Sbjct: 1205 ccatgctgatcctcccatcagatgtc 1180
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>gb|BT016540.1| Zea mays clone Contig373 mRNA sequence
          Length = 1698

 Score =  105 bits (53), Expect = 9e-20
 Identities = 83/93 (89%)
 Strand = Plus / Minus

                                                                        
Query: 235  ttcagttttgtaaccgcagcatgtatggcatctgcaagatggggtacagtcctggagctc 294
            |||||||  ||||| ||||| ||||||||||||||||||||||| ||||||||   ||||
Sbjct: 1422 ttcagttgagtaactgcagcgtgtatggcatctgcaagatggggcacagtcctcatgctc 1363

                                             
Query: 295  aaacctgccatgctgatcctcccatcggatgtc 327
            ||||| |||||||||||||||||||| ||||||
Sbjct: 1362 aaaccggccatgctgatcctcccatcagatgtc 1330
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>gb|BT016854.1| Zea mays clone Contig687 mRNA sequence
          Length = 1481

 Score =  105 bits (53), Expect = 9e-20
 Identities = 83/93 (89%)
 Strand = Plus / Plus

                                                                       
Query: 235 ttcagttttgtaaccgcagcatgtatggcatctgcaagatggggtacagtcctggagctc 294
           |||||||  ||||| ||||| ||||||||||||||||||||||| ||||||||   ||||
Sbjct: 637 ttcagttgagtaactgcagcgtgtatggcatctgcaagatggggcacagtcctcatgctc 696

                                            
Query: 295 aaacctgccatgctgatcctcccatcggatgtc 327
           ||||| |||||||||||||||||||| ||||||
Sbjct: 697 aaaccggccatgctgatcctcccatcagatgtc 729
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>gb|AY103658.1| Zea mays PCO118382 mRNA sequence
          Length = 1690

 Score =  105 bits (53), Expect = 9e-20
 Identities = 83/93 (89%)
 Strand = Plus / Minus

                                                                        
Query: 235  ttcagttttgtaaccgcagcatgtatggcatctgcaagatggggtacagtcctggagctc 294
            |||||||  ||||| ||||| ||||||||||||||||||||||| ||||||||   ||||
Sbjct: 1447 ttcagttgagtaactgcagcgtgtatggcatctgcaagatggggcacagtcctcatgctc 1388

                                             
Query: 295  aaacctgccatgctgatcctcccatcggatgtc 327
            ||||| |||||||||||||||||||| ||||||
Sbjct: 1387 aaaccggccatgctgatcctcccatcagatgtc 1355
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>dbj|AB110193.1| Oryza sativa (japonica cultivar-group) mRNA for aspartate
            aminotransferase, complete cds, clone: 22C4AG009
          Length = 1502

 Score = 83.8 bits (42), Expect = 3e-13
 Identities = 87/102 (85%)
 Strand = Plus / Minus

                                                                        
Query: 226  atcattcacttcagttttgtaaccgcagcatgtatggcatctgcaagatggggtacagtc 285
            |||||||||||||||||||| || || ||||| || |||||||||||||| || |  |||
Sbjct: 1285 atcattcacttcagttttgtgactgcggcatggattgcatctgcaagatgcggaatggtc 1226

                                                      
Query: 286  ctggagctcaaacctgccatgctgatcctcccatcggatgtc 327
            ||   ||||||||| ||||| |||||||||||||| ||||||
Sbjct: 1225 ctcccgctcaaaccagccatactgatcctcccatcagatgtc 1184
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>dbj|D14673.1|RICAAT Oryza sativa (japonica cultivar-group) mRNA for aspartate
            aminotransferase, complete cds
          Length = 1514

 Score = 83.8 bits (42), Expect = 3e-13
 Identities = 87/102 (85%)
 Strand = Plus / Minus

                                                                        
Query: 226  atcattcacttcagttttgtaaccgcagcatgtatggcatctgcaagatggggtacagtc 285
            |||||||||||||||||||| || || ||||| || |||||||||||||| || |  |||
Sbjct: 1297 atcattcacttcagttttgtgactgcggcatggattgcatctgcaagatgcggaatggtc 1238

                                                      
Query: 286  ctggagctcaaacctgccatgctgatcctcccatcggatgtc 327
            ||   ||||||||| ||||| |||||||||||||| ||||||
Sbjct: 1237 ctcccgctcaaaccagccatactgatcctcccatcagatgtc 1196
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>dbj|AK104829.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-041-H04, full
            insert sequence
          Length = 1519

 Score = 83.8 bits (42), Expect = 3e-13
 Identities = 87/102 (85%)
 Strand = Plus / Minus

                                                                        
Query: 226  atcattcacttcagttttgtaaccgcagcatgtatggcatctgcaagatggggtacagtc 285
            |||||||||||||||||||| || || ||||| || |||||||||||||| || |  |||
Sbjct: 1302 atcattcacttcagttttgtgactgcggcatggattgcatctgcaagatgcggaatggtc 1243

                                                      
Query: 286  ctggagctcaaacctgccatgctgatcctcccatcggatgtc 327
            ||   ||||||||| ||||| |||||||||||||| ||||||
Sbjct: 1242 ctcccgctcaaaccagccatactgatcctcccatcagatgtc 1201
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>dbj|AK103586.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033133B14, full
            insert sequence
          Length = 1888

 Score = 83.8 bits (42), Expect = 3e-13
 Identities = 87/102 (85%)
 Strand = Plus / Minus

                                                                        
Query: 226  atcattcacttcagttttgtaaccgcagcatgtatggcatctgcaagatggggtacagtc 285
            |||||||||||||||||||| || || ||||| || |||||||||||||| || |  |||
Sbjct: 1671 atcattcacttcagttttgtgactgcggcatggattgcatctgcaagatgcggaatggtc 1612

                                                      
Query: 286  ctggagctcaaacctgccatgctgatcctcccatcggatgtc 327
            ||   ||||||||| ||||| |||||||||||||| ||||||
Sbjct: 1611 ctcccgctcaaaccagccatactgatcctcccatcagatgtc 1570
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>dbj|AK103133.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033120D06, full
            insert sequence
          Length = 1525

 Score = 83.8 bits (42), Expect = 3e-13
 Identities = 87/102 (85%)
 Strand = Plus / Minus

                                                                        
Query: 226  atcattcacttcagttttgtaaccgcagcatgtatggcatctgcaagatggggtacagtc 285
            |||||||||||||||||||| || || ||||| || |||||||||||||| || |  |||
Sbjct: 1308 atcattcacttcagttttgtgactgcggcatggattgcatctgcaagatgcggaatggtc 1249

                                                      
Query: 286  ctggagctcaaacctgccatgctgatcctcccatcggatgtc 327
            ||   ||||||||| ||||| |||||||||||||| ||||||
Sbjct: 1248 ctcccgctcaaaccagccatactgatcctcccatcagatgtc 1207
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>dbj|AK099338.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033026J06, full
            insert sequence
          Length = 1626

 Score = 83.8 bits (42), Expect = 3e-13
 Identities = 87/102 (85%)
 Strand = Plus / Minus

                                                                        
Query: 226  atcattcacttcagttttgtaaccgcagcatgtatggcatctgcaagatggggtacagtc 285
            |||||||||||||||||||| || || ||||| || |||||||||||||| || |  |||
Sbjct: 1409 atcattcacttcagttttgtgactgcggcatggattgcatctgcaagatgcggaatggtc 1350

                                                      
Query: 286  ctggagctcaaacctgccatgctgatcctcccatcggatgtc 327
            ||   ||||||||| ||||| |||||||||||||| ||||||
Sbjct: 1349 ctcccgctcaaaccagccatactgatcctcccatcagatgtc 1308
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>dbj|AK067557.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013112H20, full
            insert sequence
          Length = 1668

 Score = 83.8 bits (42), Expect = 3e-13
 Identities = 87/102 (85%)
 Strand = Plus / Minus

                                                                        
Query: 226  atcattcacttcagttttgtaaccgcagcatgtatggcatctgcaagatggggtacagtc 285
            |||||||||||||||||||| || || ||||| || |||||||||||||| || |  |||
Sbjct: 1451 atcattcacttcagttttgtgactgcggcatggattgcatctgcaagatgcggaatggtc 1392

                                                      
Query: 286  ctggagctcaaacctgccatgctgatcctcccatcggatgtc 327
            ||   ||||||||| ||||| |||||||||||||| ||||||
Sbjct: 1391 ctcccgctcaaaccagccatactgatcctcccatcagatgtc 1350
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>emb|X63429.1|PMAAT2 P.miliaceum mRNA for aspartate aminotransferase (pcAAT2)
          Length = 1514

 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 83/97 (85%)
 Strand = Plus / Minus

                                                                        
Query: 231  tcacttcagttttgtaaccgcagcatgtatggcatctgcaagatggggtacagtcctgga 290
            |||||||||||  ||||| ||||| ||||||||||||||||||||||| ||| || |   
Sbjct: 1276 tcacttcagttgagtaactgcagcgtgtatggcatctgcaagatggggcacattcttcat 1217

                                                 
Query: 291  gctcaaacctgccatgctgatcctcccatcggatgtc 327
            | ||||||| ||||| ||||||||||| |||||||||
Sbjct: 1216 gttcaaaccagccatactgatcctcccgtcggatgtc 1180
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>ref|XM_463436.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1224

 Score = 73.8 bits (37), Expect = 3e-10
 Identities = 82/97 (84%)
 Strand = Plus / Minus

                                                                        
Query: 231  tcacttcagttttgtaaccgcagcatgtatggcatctgcaagatggggtacagtcctgga 290
            ||||||||||||||| || || ||||| || |||||||||||||| || |  |||||   
Sbjct: 1224 tcacttcagttttgtgactgcggcatggattgcatctgcaagatgcggaatggtcctccc 1165

                                                 
Query: 291  gctcaaacctgccatgctgatcctcccatcggatgtc 327
            ||||||||| ||||| |||||||||||||| ||||||
Sbjct: 1164 gctcaaaccagccatactgatcctcccatcagatgtc 1128
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 69.9 bits (35), Expect = 5e-09
 Identities = 77/91 (84%)
 Strand = Plus / Plus

                                                                            
Query: 226      atcattcacttcagttttgtaaccgcagcatgtatggcatctgcaagatggggtacagtc 285
                |||||||||||||||||||| || || ||||| || |||||||||||||| || |  |||
Sbjct: 31992352 atcattcacttcagttttgtgactgcggcatggattgcatctgcaagatgcggaatggtc 31992411

                                               
Query: 286      ctggagctcaaacctgccatgctgatcctcc 316
                ||   ||||||||| ||||| ||||||||||
Sbjct: 31992412 ctcccgctcaaaccagccatactgatcctcc 31992442
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>dbj|AP003274.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0512C01
          Length = 176261

 Score = 69.9 bits (35), Expect = 5e-09
 Identities = 77/91 (84%)
 Strand = Plus / Plus

                                                                         
Query: 226   atcattcacttcagttttgtaaccgcagcatgtatggcatctgcaagatggggtacagtc 285
             |||||||||||||||||||| || || ||||| || |||||||||||||| || |  |||
Sbjct: 34166 atcattcacttcagttttgtgactgcggcatggattgcatctgcaagatgcggaatggtc 34225

                                            
Query: 286   ctggagctcaaacctgccatgctgatcctcc 316
             ||   ||||||||| ||||| ||||||||||
Sbjct: 34226 ctcccgctcaaaccagccatactgatcctcc 34256
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>dbj|AP003256.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0460E08
          Length = 170021

 Score = 69.9 bits (35), Expect = 5e-09
 Identities = 77/91 (84%)
 Strand = Plus / Plus

                                                                         
Query: 226   atcattcacttcagttttgtaaccgcagcatgtatggcatctgcaagatggggtacagtc 285
             |||||||||||||||||||| || || ||||| || |||||||||||||| || |  |||
Sbjct: 89079 atcattcacttcagttttgtgactgcggcatggattgcatctgcaagatgcggaatggtc 89138

                                            
Query: 286   ctggagctcaaacctgccatgctgatcctcc 316
             ||   ||||||||| ||||| ||||||||||
Sbjct: 89139 ctcccgctcaaaccagccatactgatcctcc 89169
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>dbj|D25322.1|PNIAATA Panicum miliaceum gene for cytosolic aspartate aminotransferase,
            complete cds
          Length = 7822

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 73/86 (84%)
 Strand = Plus / Minus

                                                                        
Query: 231  tcacttcagttttgtaaccgcagcatgtatggcatctgcaagatggggtacagtcctgga 290
            |||||||||||  ||||| ||||| ||||||||||||||||||||||| ||| || |   
Sbjct: 6582 tcacttcagttgagtaactgcagcgtgtatggcatctgcaagatggggcacattcttcat 6523

                                      
Query: 291  gctcaaacctgccatgctgatcctcc 316
            | ||||||| ||||| ||||||||||
Sbjct: 6522 gttcaaaccagccatactgatcctcc 6497
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>gb|AF470320.1| Musa acuminata aspartate aminotransferase 2 mRNA, partial cds
          Length = 574

 Score = 65.9 bits (33), Expect = 8e-08
 Identities = 66/77 (85%)
 Strand = Plus / Minus

                                                                       
Query: 244 gtaaccgcagcatgtatggcatctgcaagatggggtacagtcctggagctcaaacctgcc 303
           ||||| |||||||| ||||||||  ||||||| || || ||  | ||||||||||| |||
Sbjct: 332 gtaactgcagcatgaatggcatcaacaagatgaggaactgtttttgagctcaaaccggcc 273

                            
Query: 304 atgctgatcctcccatc 320
           |||||||||||||||||
Sbjct: 272 atgctgatcctcccatc 256
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>gb|AF470319.1| Musa acuminata aspartate aminotransferase 1 mRNA, partial cds
          Length = 606

 Score = 65.9 bits (33), Expect = 8e-08
 Identities = 66/77 (85%)
 Strand = Plus / Minus

                                                                       
Query: 244 gtaaccgcagcatgtatggcatctgcaagatggggtacagtcctggagctcaaacctgcc 303
           ||||| |||||||| ||||||||  ||||||| || || ||  | ||||||||||| |||
Sbjct: 332 gtaactgcagcatgaatggcatcaacaagatgaggaactgtttttgagctcaaaccggcc 273

                            
Query: 304 atgctgatcctcccatc 320
           |||||||||||||||||
Sbjct: 272 atgctgatcctcccatc 256
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>gb|M92660.1|DARAAT Daucus carota aspartate aminotransferase (cytoplasmic isoform) mRNA,
            complete cds
          Length = 1523

 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 71/84 (84%)
 Strand = Plus / Minus

                                                                        
Query: 244  gtaaccgcagcatgtatggcatctgcaagatggggtacagtcctggagctcaaacctgcc 303
            ||||| |||||||| || |||||||||||||| || || || | ||| || | |||||||
Sbjct: 1228 gtaactgcagcatgaatagcatctgcaagatgaggaactgttcgggaactaagacctgcc 1169

                                    
Query: 304  atgctgatcctcccatcggatgtc 327
            |||||||||| |||||| ||||||
Sbjct: 1168 atgctgatccgcccatcagatgtc 1145
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>emb|X61577.1|MSAAT1MR M.sativa aat-1 mRNA for aspartate aminotransferase
          Length = 1514

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 64/75 (85%)
 Strand = Plus / Minus

                                                                        
Query: 253  gcatgtatggcatctgcaagatggggtacagtcctggagctcaaacctgccatgctgatc 312
            |||||||| ||||| || ||||| || || ||  ||||||||||||| |||||||| |||
Sbjct: 1233 gcatgtattgcatcagccagatgtgggactgttttggagctcaaaccagccatgctaatc 1174

                           
Query: 313  ctcccatcggatgtc 327
            |||||||| ||||||
Sbjct: 1173 ctcccatcagatgtc 1159
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>gb|DQ455441.1| Medicago truncatula cDNA-AFLP fragment BT32M32_382 sequence
          Length = 298

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 64/75 (85%)
 Strand = Plus / Minus

                                                                       
Query: 253 gcatgtatggcatctgcaagatggggtacagtcctggagctcaaacctgccatgctgatc 312
           |||||||| ||||| || ||||| || || ||  ||||||||||||| |||||||| |||
Sbjct: 277 gcatgtattgcatcggccagatgtgggactgttttggagctcaaaccagccatgctaatc 218

                          
Query: 313 ctcccatcggatgtc 327
           |||||||| ||||||
Sbjct: 217 ctcccatcagatgtc 203
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>emb|X94184.1|LJAAT L.japonicus mRNA for aspartate aminotransferase
          Length = 1753

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 63/75 (84%)
 Strand = Plus / Minus

                                                                        
Query: 253  gcatgtatggcatctgcaagatggggtacagtcctggagctcaaacctgccatgctgatc 312
            |||||||| ||||| || ||||| || || ||  |||| |||||||| |||||||| |||
Sbjct: 1320 gcatgtatagcatccgccagatgtgggacggttttggaactcaaaccagccatgctaatc 1261

                           
Query: 313  ctcccatcggatgtc 327
            | |||||||||||||
Sbjct: 1260 cgcccatcggatgtc 1246
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>gb|AF034210.1|AF034210 Glycine max aspartate aminotransferase glyoxysomal isozyme AAT1
            precursor and aspartate aminotransferase cytosolic
            isozyme AAT2 (AAT) mRNA, complete cds
          Length = 1690

 Score = 46.1 bits (23), Expect = 0.070
 Identities = 62/75 (82%)
 Strand = Plus / Minus

                                                                        
Query: 253  gcatgtatggcatctgcaagatggggtacagtcctggagctcaaacctgccatgctgatc 312
            |||||||| ||||| || ||| | || |||||  |||| |||| ||| |||||||| |||
Sbjct: 1500 gcatgtatcgcatccgccagaagtgggacagttttggaactcagaccagccatgctaatc 1441

                           
Query: 313  ctcccatcggatgtc 327
            |||||||| ||||||
Sbjct: 1440 ctcccatcagatgtc 1426
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>gb|L25334.1|ALFAAT1A Medicago sativa aspartate aminotransferase (AAT1) gene, complete cds
          Length = 5474

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 287  tggagctcaaacctgccatgctgatcctcc 316
            ||||||||||||| |||||||| |||||||
Sbjct: 4950 tggagctcaaaccagccatgctaatcctcc 4921
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>gb|AC152493.3| Rhinolophus ferrumequinum clone VMRC7-244O22, complete sequence
          Length = 75463

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 194   aagattttattgcggaagggg 214
             |||||||||||||||||||||
Sbjct: 32021 aagattttattgcggaagggg 32041



 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 191   tttaagattttattgcggaagggg 214
             ||||||||||||||| ||||||||
Sbjct: 47474 tttaagattttattggggaagggg 47497
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>gb|CP000077.1| Sulfolobus acidocaldarius DSM 639, complete genome
          Length = 2225959

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 101     acaacaattttagtaagtcta 121
               |||||||||||||||||||||
Sbjct: 1312282 acaacaattttagtaagtcta 1312262
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>dbj|AK038675.1| Mus musculus adult male hypothalamus cDNA, RIKEN full-length
           enriched library, clone:A230054C15
           product:unclassifiable, full insert sequence
          Length = 2669

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 123 aaggcaaattcctgagttcag 143
           |||||||||||||||||||||
Sbjct: 944 aaggcaaattcctgagttcag 924
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>gb|AF187872.1|AF187872 Cavia porcellus inwardly-rectifying potassium channel Kir2.1 (KCNJ2)
             gene, complete cds
          Length = 11618

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 86    acaaaactgtctcagacaaca 106
             |||||||||||||||||||||
Sbjct: 10729 acaaaactgtctcagacaaca 10749
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>gb|DP000028.1| Rhinolophus ferrumequinum target 1 genomic scaffold
          Length = 1756392

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 194    aagattttattgcggaagggg 214
              |||||||||||||||||||||
Sbjct: 835329 aagattttattgcggaagggg 835349



 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 191    tttaagattttattgcggaagggg 214
              ||||||||||||||| ||||||||
Sbjct: 850782 tttaagattttattggggaagggg 850805
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>gb|AC153827.5| Mus musculus 6 BAC RP23-58O24 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 234403

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 123   aaggcaaattcctgagttcag 143
             |||||||||||||||||||||
Sbjct: 91674 aaggcaaattcctgagttcag 91694
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>gb|AC153875.3| Mus musculus 6 BAC RP23-218N14 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 187367

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 123   aaggcaaattcctgagttcag 143
             |||||||||||||||||||||
Sbjct: 25010 aaggcaaattcctgagttcag 24990
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>gb|U33846.1|SAU33846 Sulfolobus acidocaldarius DNA polymerase gene, complete cds
          Length = 3097

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 101 acaacaattttagtaagtcta 121
           |||||||||||||||||||||
Sbjct: 676 acaacaattttagtaagtcta 656
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>gb|AC158921.17| Mus musculus chromosome 15, clone RP23-120K5, complete sequence
          Length = 218949

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 122    caaggcaaattcctgagttca 142
              |||||||||||||||||||||
Sbjct: 156419 caaggcaaattcctgagttca 156439
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>gb|M92094.1|LUPAATP1A L.angustifolius aspartate aminotransferase P1 (AAT-P1) mRNA, complete
            cds
          Length = 1454

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                     
Query: 287  tggagctcaaacctgccatgctgatcctcccatcggatgtc 327
            |||| |||| ||| |||||||| ||||||||||| ||||||
Sbjct: 1243 tggaactcagaccagccatgctaatcctcccatcagatgtc 1203
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>gb|AC122238.4| Mus musculus BAC clone RP23-143D4 from chromosome 10, complete sequence
          Length = 188476

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 124    aggcaaattcctgagttcag 143
              ||||||||||||||||||||
Sbjct: 100847 aggcaaattcctgagttcag 100828
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>gb|AC183752.3| Rhinolophus ferrumequinum clone VMRC7-380K18, complete sequence
          Length = 39225

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 191  tttaagattttattgcggaagggg 214
            ||||||||||||||| ||||||||
Sbjct: 3693 tttaagattttattggggaagggg 3716
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>gb|AC136507.19| Medicago truncatula clone mth2-24o19, complete sequence
          Length = 131025

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 51    gattcaaaatcaccatcatc 70
             ||||||||||||||||||||
Sbjct: 38960 gattcaaaatcaccatcatc 38941
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>gb|AC146941.8| Medicago truncatula clone mth2-133o10, complete sequence
          Length = 134901

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 51     gattcaaaatcaccatcatc 70
              ||||||||||||||||||||
Sbjct: 118939 gattcaaaatcaccatcatc 118958
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>emb|AL137139.9| Human DNA sequence from clone RP11-134O15 on chromosome 13 Contains the
             3' end of the CLYBL gene for citrate lyase beta like (CLB
             bA134O15.1) and a CpG island, complete sequence
          Length = 174128

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 85    aacaaaactgtctcagacaa 104
             ||||||||||||||||||||
Sbjct: 52968 aacaaaactgtctcagacaa 52949
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>gb|AC084116.7| Homo sapiens chromosome 8, clone RP11-103H7, complete sequence
          Length = 185339

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 84     gaacaaaactgtctcagacaacaa 107
              |||||||||||||||| |||||||
Sbjct: 148545 gaacaaaactgtctcaaacaacaa 148522
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>emb|AL714011.12| Mouse DNA sequence from clone RP23-380O17 on chromosome 4 Contains a
            CpG island, complete sequence
          Length = 166093

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 124  aggcaaattcctgagttcag 143
            ||||||||||||||||||||
Sbjct: 2837 aggcaaattcctgagttcag 2856
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>gb|AC104384.3| Homo sapiens chromosome 8, clone CTD-2381M20, complete sequence
          Length = 163996

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 118  tctacaaggcaaattcctga 137
            ||||||||||||||||||||
Sbjct: 8025 tctacaaggcaaattcctga 8044
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>gb|AC087808.2| Homo sapiens chromosome 8, clone RP11-89A16, complete sequence
          Length = 189878

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 118   tctacaaggcaaattcctga 137
             ||||||||||||||||||||
Sbjct: 76258 tctacaaggcaaattcctga 76277
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>gb|AC021396.6|AC021396 Homo sapiens, clone RP11-28I2, complete sequence
          Length = 200673

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 84    gaacaaaactgtctcagacaacaa 107
             |||||||||||||||| |||||||
Sbjct: 43694 gaacaaaactgtctcaaacaacaa 43671
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>emb|BX248117.9| Zebrafish DNA sequence from clone CH211-226D5, complete sequence
          Length = 181542

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 104    acaattttagtaagtctaca 123
              ||||||||||||||||||||
Sbjct: 108309 acaattttagtaagtctaca 108290
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>gb|AC157768.4| Mus musculus chromosome 1, clone RP24-308M3, complete sequence
          Length = 202770

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 301   gccatgctgatcctcccatc 320
             ||||||||||||||||||||
Sbjct: 61408 gccatgctgatcctcccatc 61389


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,095,136
Number of Sequences: 3902068
Number of extensions: 3095136
Number of successful extensions: 55136
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 55041
Number of HSP's gapped (non-prelim): 85
length of query: 327
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 305
effective length of database: 17,147,199,772
effective search space: 5229895930460
effective search space used: 5229895930460
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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