>CUTI_PHYCP (P41754) Putative cutinase (EC 3.1.1.74) (Cutin hydrolase)|
          Length = 210

 Score = 31.2 bits (69), Expect = 0.74
 Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
 Frame = -3

Query: 230 MIPMYASSLSKIYGEVSSVDQFVTSLCFYLFPRFLCVYSSCKMLGSLCGP-INPYYKTYP 54
           M  M++  +S +     S  Q   S C  L P F+ +YS+  +L +L    ++PY  T P
Sbjct: 108 MHDMFSPCISGVANSQHSSSQSPRSHCRSLVPSFIAIYSASVVLCALISCFLDPYETTLP 167

Query: 53  LWATYGC 33
           L     C
Sbjct: 168 LTNVTNC 174

>T1SG_MYCPN (P75492) Putative type I restriction enzyme specificity protein|
           MPN285 (S protein) (S.MpnORFGP) (A65_orf306)
          Length = 306

 Score = 29.3 bits (64), Expect = 2.8
 Identities = 17/40 (42%), Positives = 18/40 (45%), Gaps = 2/40 (5%)
 Frame = -3

Query: 122 VYSSCKMLGSLCGPINPY--YKTYPLWATYGCKGWNKTYR 9
           VYSS    G L G IN Y  +  Y  W T G    N  YR
Sbjct: 148 VYSSATTNGGLIGKINDYDFHGEYVTWTTGGAHAGNVFYR 187

>PRKDC_HUMAN (P78527) DNA-dependent protein kinase catalytic subunit (EC 2.7.11.1)|
            (DNA-PK catalytic subunit) (DNA-PKcs) (DNPK1) (p460)
          Length = 4128

 Score = 28.5 bits (62), Expect = 4.8
 Identities = 13/47 (27%), Positives = 21/47 (44%)
 Frame = -1

Query: 148  FTYFPDFCVCTPHVKCWAACVVPLTPIIKLIRCGQHTDAKDGIKLID 8
            F++FP F  C   + C  A ++ L P      C        GI+L++
Sbjct: 2848 FSFFPPFVSCIQDISCQHAALLSLDPAAVSAGCLASLQQPVGIRLLE 2894

>T2FB_DROME (P41900) Transcription initiation factor IIF beta subunit (EC|
           3.6.1.-) (ATP-dependent helicase TfIIF-beta)
           (TFIIF-beta)
          Length = 277

 Score = 27.7 bits (60), Expect = 8.2
 Identities = 11/35 (31%), Positives = 20/35 (57%)
 Frame = +2

Query: 104 FYMRSTHTKIWEIGKNINSLQTGQRKILHHKSYSA 208
           + M++ H  +WE+ K     +T ++K   HKS S+
Sbjct: 240 YNMKNPHKNMWELKKEYRHYKTEEKKEEEHKSGSS 274

>STUB_DROME (Q05319) Serine proteinase stubble (EC 3.4.21.-) (Protein|
           stubble-stubbloid) [Contains: Serine proteinase stubble
           non-catalytic chain; Serine proteinase stubble catalytic
           chain]
          Length = 787

 Score = 27.7 bits (60), Expect = 8.2
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = +3

Query: 6   QSISFIPSFASVCCPQRISFIIGVNGT 86
           Q + F P  + +C P+  S +IG+N T
Sbjct: 648 QPLEFAPHVSPICLPETDSLLIGMNAT 674


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 38,041,987
Number of Sequences: 219361
Number of extensions: 728721
Number of successful extensions: 1561
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1552
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1561
length of database: 80,573,946
effective HSP length: 56
effective length of database: 68,289,730
effective search space used: 1638953520
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)