ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart48a05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|AJ234711.1|HVU234711 Hordeum vulgare genomic DNA fragment; c... 129 9e-27
2ref|XM_473798.1| Oryza sativa (japonica cultivar-group), predic... 80 7e-12
3emb|AL662996.3|OSJN00198 Oryza sativa genomic DNA, chromosome 4,... 80 7e-12
4dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 80 7e-12
5dbj|AK104574.1| Oryza sativa (japonica cultivar-group) cDNA clon... 80 7e-12
6dbj|AK066546.1| Oryza sativa (japonica cultivar-group) cDNA clon... 80 7e-12
7dbj|AK061732.1| Oryza sativa (japonica cultivar-group) cDNA clon... 80 7e-12
8emb|AL163282.2|HS21C082 Homo sapiens chromosome 21 segment HS21C082 46 0.10
9dbj|BS000158.1| Pan troglodytes chromosome 22 clone:PTB-042G18, ... 46 0.10
10emb|AL954234.1|PTB080A15 Pan troglodytes chromosome 22 BAC PTB-0... 46 0.10
11gb|AF042090.1|AF042090 Homo sapiens chromosome 21q22.3 PAC 171F1... 46 0.10
12emb|AL671983.18| Mouse DNA sequence from clone RP23-232B3 on chr... 44 0.40
13gb|AC010015.5| Drosophila melanogaster 3L BAC RP98-9C21 (Roswell... 44 0.40
14gb|AC010061.6| Drosophila melanogaster 3L BAC RP98-11F16 (Roswel... 44 0.40
15emb|BX649327.17| Zebrafish DNA sequence from clone CH211-197G15 ... 44 0.40
16gb|AE003531.3| Drosophila melanogaster chromosome 3L, section 54... 44 0.40
17gb|AC090441.3| Oryza sativa (japonica cultivar-group) chromosome... 42 1.6
18emb|BX890610.8| Zebrafish DNA sequence from clone DKEY-122C9, co... 42 1.6
19dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
20gb|AC104091.4| Homo sapiens BAC clone RP11-1173K8 from 2, comple... 42 1.6
21emb|BX000536.7| Zebrafish DNA sequence from clone CH211-10C6 in ... 42 1.6
22dbj|AK114819.1| Ciona intestinalis cDNA, clone:cieg019a04, full ... 42 1.6
23gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 42 1.6
24gb|AC127422.4| Mus musculus BAC clone RP24-383K20 from chromosom... 40 6.2
25gb|AC149303.10| Medicago truncatula clone mth2-76a20, complete s... 40 6.2
26emb|BX005432.7| Human DNA sequence from clone DASS-352F1 on chro... 40 6.2
27emb|AL662781.4| Human DNA sequence from clone XXbac-1H2 on chrom... 40 6.2
28emb|AL662857.3| Human DNA sequence from clone XXbac-147D4 on chr... 40 6.2
29emb|AL138686.14| Human DNA sequence from clone RP11-189B4 on chr... 40 6.2
30emb|AL929357.1|PFA929357 Plasmodium falciparum strain 3D7, chrom... 40 6.2
31emb|CR936918.2| Human DNA sequence from clone DAAP-191E6 on chro... 40 6.2
32emb|BX510321.9| Zebrafish DNA sequence from clone CH211-255P13 i... 40 6.2
33emb|CR759808.2| Human DNA sequence from clone DAMC-143C14 on chr... 40 6.2
34gb|AC022825.9| Homo sapiens chromosome 8, clone RP11-88J22, comp... 40 6.2
35emb|CR753509.3| Human DNA sequence from clone DADB-246O10 on chr... 40 6.2
36gb|AC008829.7| Homo sapiens chromosome 5 clone CTD-2140K22, comp... 40 6.2
37gb|AY016410.1| Bacillus thuringiensis PS167H2 binary insecticida... 40 6.2
38gb|AC079070.6| Homo sapiens chromosome 18, clone RP11-126K15, co... 40 6.2
39gb|AC105395.1| Homo sapiens chromosome 4 clone RP11-397A19, comp... 40 6.2
40gb|AC026330.12| Homo sapiens 3 BAC RP11-414D23 (Roswell Park Can... 40 6.2
41gb|CP000237.1| Neorickettsia sennetsu strain Miyayama, complete ... 40 6.2
42gb|AC010947.6| Homo sapiens chromosome 18, clone RP11-25L3, comp... 40 6.2
43dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
44emb|BX908738.4| Human DNA sequence from clone DAMA-148L19 on chr... 40 6.2
45emb|BX927232.4| Human DNA sequence from clone DAMA-334F21 on chr... 40 6.2
46gb|AC098828.3| Homo sapiens BAC clone RP11-644K8 from 2, complet... 40 6.2
47gb|AC112510.9| Homo sapiens 3 BAC RP11-432A8 (Roswell Park Cance... 40 6.2
48gb|AY552581.1| Bacillus thuringiensis strain PS242K10 Cry35Ac-li... 40 6.2
49dbj|BA000016.3| Clostridium perfringens str. 13 DNA, complete ge... 40 6.2
50gb|AC101851.11| Mus musculus chromosome 7, clone RP23-276E14, co... 40 6.2
51gb|AF083221.1|AF083221 Fugu rubripes putative neurotransmitter r... 40 6.2
52gb|AC005827.3|AC005827 Homo sapiens clone 14503, complete sequence 40 6.2
53gb|AE003573.4| Drosophila melanogaster chromosome X, section 74 ... 40 6.2
54gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 6.2
55emb|AL096770.17|HSBA150A6 Human DNA sequence from clone RP11-150... 40 6.2
56emb|AL731784.3|CNS08C88 Oryza sativa chromosome 12, . BAC OSJNBa... 40 6.2
57gb|AC145736.4| Mus musculus BAC clone RP24-296K18 from 9, comple... 40 6.2
58emb|AL627392.12| Mouse DNA sequence from clone RP23-185I12 on ch... 40 6.2 
>emb|AJ234711.1|HVU234711 Hordeum vulgare genomic DNA fragment; clone MWG2025.uni
          Length = 218

 Score =  129 bits (65), Expect = 9e-27
 Identities = 71/73 (97%)
 Strand = Plus / Minus

                                                                       
Query: 294 ccttaatgatgcttgggcgaatccctccgtggcgagaagagccgccgtggtgaaagcatg 353
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 190 ccttaatgatgcttgggcgaatccctccgcggcgagaagagccgccgtggtgaaagcatg 131

                        
Query: 354 gagaggaaccccg 366
           |||| ||||||||
Sbjct: 130 gagaagaaccccg 118
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>ref|XM_473798.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1059

 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 124/152 (81%)
 Strand = Plus / Minus

                                                                        
Query: 302  atgcttgggcgaatccctccgtggcgagaagagccgccgtggtgaaagcatggagaggaa 361
            |||||||||||||| |||||| ||||||||||| || || || || ||||||| ||||||
Sbjct: 1053 atgcttgggcgaattcctccgcggcgagaagaggcggcgcggcgagagcatggtgaggaa 994

                                                                        
Query: 362  ccccggagacgcggcgccgttcagcgaacggtaatccgacatcaagaagccctccgagtt 421
            || ||| || |||  |||||| ||||| ||||| |||||||| | || |||||||| |||
Sbjct: 993  cctcggcgaggcgatgccgttgagcgaccggtagtccgacatgaggaggccctccgtgtt 934

                                            
Query: 422  gtcatgggcactcttgcgtccgggcgtcatcc 453
             || ||  | ||  |||| |||||||||||||
Sbjct: 933  ctcgtgcaccctggtgcgcccgggcgtcatcc 902
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>emb|AL662996.3|OSJN00198 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0015N08,
             complete sequence
          Length = 129037

 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 124/152 (81%)
 Strand = Plus / Plus

                                                                         
Query: 302   atgcttgggcgaatccctccgtggcgagaagagccgccgtggtgaaagcatggagaggaa 361
             |||||||||||||| |||||| ||||||||||| || || || || ||||||| ||||||
Sbjct: 63058 atgcttgggcgaattcctccgcggcgagaagaggcggcgcggcgagagcatggtgaggaa 63117

                                                                         
Query: 362   ccccggagacgcggcgccgttcagcgaacggtaatccgacatcaagaagccctccgagtt 421
             || ||| || |||  |||||| ||||| ||||| |||||||| | || |||||||| |||
Sbjct: 63118 cctcggcgaggcgatgccgttgagcgaccggtagtccgacatgaggaggccctccgtgtt 63177

                                             
Query: 422   gtcatgggcactcttgcgtccgggcgtcatcc 453
              || ||  | ||  |||| |||||||||||||
Sbjct: 63178 ctcgtgcaccctggtgcgcccgggcgtcatcc 63209
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 124/152 (81%)
 Strand = Plus / Plus

                                                                            
Query: 302      atgcttgggcgaatccctccgtggcgagaagagccgccgtggtgaaagcatggagaggaa 361
                |||||||||||||| |||||| ||||||||||| || || || || ||||||| ||||||
Sbjct: 30587350 atgcttgggcgaattcctccgcggcgagaagaggcggcgcggcgagagcatggtgaggaa 30587409

                                                                            
Query: 362      ccccggagacgcggcgccgttcagcgaacggtaatccgacatcaagaagccctccgagtt 421
                || ||| || |||  |||||| ||||| ||||| |||||||| | || |||||||| |||
Sbjct: 30587410 cctcggcgaggcgatgccgttgagcgaccggtagtccgacatgaggaggccctccgtgtt 30587469

                                                
Query: 422      gtcatgggcactcttgcgtccgggcgtcatcc 453
                 || ||  | ||  |||| |||||||||||||
Sbjct: 30587470 ctcgtgcaccctggtgcgcccgggcgtcatcc 30587501
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>dbj|AK104574.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-H11, full
            insert sequence
          Length = 1338

 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 124/152 (81%)
 Strand = Plus / Minus

                                                                        
Query: 302  atgcttgggcgaatccctccgtggcgagaagagccgccgtggtgaaagcatggagaggaa 361
            |||||||||||||| |||||| ||||||||||| || || || || ||||||| ||||||
Sbjct: 1053 atgcttgggcgaattcctccgcggcgagaagaggcggcgcggcgagagcatggtgaggaa 994

                                                                        
Query: 362  ccccggagacgcggcgccgttcagcgaacggtaatccgacatcaagaagccctccgagtt 421
            || ||| || |||  |||||| ||||| ||||| |||||||| | || |||||||| |||
Sbjct: 993  cctcggcgaggcgatgccgttgagcgaccggtagtccgacatgaggaggccctccgtgtt 934

                                            
Query: 422  gtcatgggcactcttgcgtccgggcgtcatcc 453
             || ||  | ||  |||| |||||||||||||
Sbjct: 933  ctcgtgcaccctggtgcgcccgggcgtcatcc 902
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>dbj|AK066546.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013070L16, full
            insert sequence
          Length = 1503

 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 124/152 (81%)
 Strand = Plus / Minus

                                                                        
Query: 302  atgcttgggcgaatccctccgtggcgagaagagccgccgtggtgaaagcatggagaggaa 361
            |||||||||||||| |||||| ||||||||||| || || || || ||||||| ||||||
Sbjct: 1198 atgcttgggcgaattcctccgcggcgagaagaggcggcgcggcgagagcatggtgaggaa 1139

                                                                        
Query: 362  ccccggagacgcggcgccgttcagcgaacggtaatccgacatcaagaagccctccgagtt 421
            || ||| || |||  |||||| ||||| ||||| |||||||| | || |||||||| |||
Sbjct: 1138 cctcggcgaggcgatgccgttgagcgaccggtagtccgacatgaggaggccctccgtgtt 1079

                                            
Query: 422  gtcatgggcactcttgcgtccgggcgtcatcc 453
             || ||  | ||  |||| |||||||||||||
Sbjct: 1078 ctcgtgcaccctggtgcgcccgggcgtcatcc 1047
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>dbj|AK061732.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-C05, full
            insert sequence
          Length = 1338

 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 124/152 (81%)
 Strand = Plus / Minus

                                                                        
Query: 302  atgcttgggcgaatccctccgtggcgagaagagccgccgtggtgaaagcatggagaggaa 361
            |||||||||||||| |||||| ||||||||||| || || || || ||||||| ||||||
Sbjct: 1053 atgcttgggcgaattcctccgcggcgagaagaggcggcgcggcgagagcatggtgaggaa 994

                                                                        
Query: 362  ccccggagacgcggcgccgttcagcgaacggtaatccgacatcaagaagccctccgagtt 421
            || ||| || |||  |||||| ||||| ||||| |||||||| | || |||||||| |||
Sbjct: 993  cctcggcgaggcgatgccgttgagcgaccggtagtccgacatgaggaggccctccgtgtt 934

                                            
Query: 422  gtcatgggcactcttgcgtccgggcgtcatcc 453
             || ||  | ||  |||| |||||||||||||
Sbjct: 933  ctcgtgcaccctggtgcgcccgggcgtcatcc 902
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>emb|AL163282.2|HS21C082 Homo sapiens chromosome 21 segment HS21C082
          Length = 340000

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 106    aaaaatacagaaggaaagtaaaa 128
              |||||||||||||||||||||||
Sbjct: 220585 aaaaatacagaaggaaagtaaaa 220563
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>dbj|BS000158.1| Pan troglodytes chromosome 22 clone:PTB-042G18, map 22, complete
             sequences
          Length = 190319

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 106   aaaaatacagaaggaaagtaaaa 128
             |||||||||||||||||||||||
Sbjct: 51180 aaaaatacagaaggaaagtaaaa 51158
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>emb|AL954234.1|PTB080A15 Pan troglodytes chromosome 22 BAC PTB-080A15, complete sequence
          Length = 175584

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 106   aaaaatacagaaggaaagtaaaa 128
             |||||||||||||||||||||||
Sbjct: 40557 aaaaatacagaaggaaagtaaaa 40535
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>gb|AF042090.1|AF042090 Homo sapiens chromosome 21q22.3 PAC 171F15, complete sequence
          Length = 155407

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 106   aaaaatacagaaggaaagtaaaa 128
             |||||||||||||||||||||||
Sbjct: 58802 aaaaatacagaaggaaagtaaaa 58780
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>emb|AL671983.18| Mouse DNA sequence from clone RP23-232B3 on chromosome X, complete
             sequence
          Length = 176577

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 101   taaacaaaaatacagaaggaaa 122
             ||||||||||||||||||||||
Sbjct: 25461 taaacaaaaatacagaaggaaa 25482
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>gb|AC010015.5| Drosophila melanogaster 3L BAC RP98-9C21 (Roswell Park Cancer
            Institute Drosophila BAC Library) complete sequence
          Length = 132655

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 49   accttacaattttctcaaaatc 70
            ||||||||||||||||||||||
Sbjct: 6933 accttacaattttctcaaaatc 6954
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>gb|AC010061.6| Drosophila melanogaster 3L BAC RP98-11F16 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 165318

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 49     accttacaattttctcaaaatc 70
              ||||||||||||||||||||||
Sbjct: 103019 accttacaattttctcaaaatc 103040
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>emb|BX649327.17| Zebrafish DNA sequence from clone CH211-197G15 in linkage group 22,
              complete sequence
          Length = 206348

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 96     gtgagtaaacaaaaatacagaa 117
              ||||||||||||||||||||||
Sbjct: 196679 gtgagtaaacaaaaatacagaa 196658
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>gb|AE003531.3| Drosophila melanogaster chromosome 3L, section 54 of 83 of the complete
              sequence
          Length = 271869

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 49     accttacaattttctcaaaatc 70
              ||||||||||||||||||||||
Sbjct: 211470 accttacaattttctcaaaatc 211491
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>gb|AC090441.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone
             OSJNBb0052C09, complete sequence
          Length = 139468

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 41    cattccaaaccttacaatttt 61
             |||||||||||||||||||||
Sbjct: 72877 cattccaaaccttacaatttt 72857
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>emb|BX890610.8| Zebrafish DNA sequence from clone DKEY-122C9, complete sequence
          Length = 189827

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 106   aaaaatacagaaggaaagtaaaagc 130
             |||||||||||||||||||| ||||
Sbjct: 19277 aaaaatacagaaggaaagtataagc 19253
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
               sequence
          Length = 22685906

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 41      cattccaaaccttacaatttt 61
               |||||||||||||||||||||
Sbjct: 9720352 cattccaaaccttacaatttt 9720332
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>gb|AC104091.4| Homo sapiens BAC clone RP11-1173K8 from 2, complete sequence
          Length = 67702

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 102   aaacaaaaatacagaaggaaagtaa 126
             ||||||||||| |||||||||||||
Sbjct: 17778 aaacaaaaatatagaaggaaagtaa 17754
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>emb|BX000536.7| Zebrafish DNA sequence from clone CH211-10C6 in linkage group 7, complete
              sequence
          Length = 199752

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 28/29 (96%), Gaps = 1/29 (3%)
 Strand = Plus / Minus

                                           
Query: 102    aaacaaaaatacagaaggaa-agtaaaag 129
              |||||||||||||||||||| ||||||||
Sbjct: 130575 aaacaaaaatacagaaggaatagtaaaag 130547
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>dbj|AK114819.1| Ciona intestinalis cDNA, clone:cieg019a04, full insert sequence
          Length = 1861

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 101 taaacaaaaatacagaaggaa 121
           |||||||||||||||||||||
Sbjct: 33  taaacaaaaatacagaaggaa 13
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 41      cattccaaaccttacaatttt 61
               |||||||||||||||||||||
Sbjct: 9726391 cattccaaaccttacaatttt 9726371
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>gb|AC127422.4| Mus musculus BAC clone RP24-383K20 from chromosome 9, complete sequence
          Length = 198803

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 103    aacaaaaatacagaaggaaa 122
              ||||||||||||||||||||
Sbjct: 191098 aacaaaaatacagaaggaaa 191079
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>gb|AC149303.10| Medicago truncatula clone mth2-76a20, complete sequence
          Length = 141028

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 136   tttttagtttatatgtacat 155
             ||||||||||||||||||||
Sbjct: 45911 tttttagtttatatgtacat 45930
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>emb|BX005432.7| Human DNA sequence from clone DASS-352F1 on chromosome 6, complete
             sequence
          Length = 56644

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 97    tgagtaaacaaaaatacagaaggaaagt 124
             ||||||||||||| ||||||| ||||||
Sbjct: 44337 tgagtaaacaaaagtacagaaagaaagt 44364
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>emb|AL662781.4| Human DNA sequence from clone XXbac-1H2 on chromosome 6 contains the
             OR5U1, OR5V1 and OR12D3 genes for olfactory receptor,
             family 5, subfamily U, member1, subfamily V, member 1 and
             family 12, subfamily D, member 3, the OR2B4P pseudogene
             for olfactory receptor, family 2, subfamily B, member 4
             and a DEAD/H box polypeptide 6 (DDX6) pseudogene, complete
             sequence
          Length = 106642

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 97    tgagtaaacaaaaatacagaaggaaagt 124
             ||||||||||||| ||||||| ||||||
Sbjct: 17106 tgagtaaacaaaagtacagaaagaaagt 17133
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>emb|AL662857.3| Human DNA sequence from clone XXbac-147D4 on chromosome 6 contains the
             OR5U1 gene for olfactory receptor, family 5, subfamily U,
             member 1, the OR2H4P, OR2G1P, OR2U1P, OR2U2P, OR2B4P
             pseudogenes for olfactory receptor, family 2, subfamily H,
             member 4, subfamily G, member 1, subfamily U, member 1,
             subfamily U, member 2, subfamily B, member 4 and a DEAD/H
             (Asp-Glu-Ala-Asp) box polypeptide 6 (DDX6) (RNA helicase,
             54 kD) pseudogene, complete sequence
          Length = 136687

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 97    tgagtaaacaaaaatacagaaggaaagt 124
             ||||||||||||| ||||||| ||||||
Sbjct: 94620 tgagtaaacaaaagtacagaaagaaagt 94647
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>emb|AL138686.14| Human DNA sequence from clone RP11-189B4 on chromosome 13q14.11-14.3
             Contains a protein phosphatase 1 regulatory (inhibitor)
             subunit 2 (PPP1R2) (IPP2) pseudogene, an olfactory
             receptor pseudogene, the gene for a novel protein similar
             to COX17 homolog cytochrome c oxidase assembly protein
             (yeast) (COX17) and a FK506 binding protein 1A 12kDa
             (FKBP1A) pseudogene and two novel genes, complete sequence
          Length = 116524

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 81    acaaacacatttgtagtgag 100
             ||||||||||||||||||||
Sbjct: 94587 acaaacacatttgtagtgag 94568
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>emb|AL929357.1|PFA929357 Plasmodium falciparum strain 3D7, chromosome 9; segment 3/5
          Length = 341050

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 175   tatgcactactgtatatata 194
             ||||||||||||||||||||
Sbjct: 55901 tatgcactactgtatatata 55882
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>emb|CR936918.2| Human DNA sequence from clone DAAP-191E6 on chromosome 6, complete
             sequence
          Length = 52589

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 97    tgagtaaacaaaaatacagaaggaaagt 124
             ||||||||||||| ||||||| ||||||
Sbjct: 38297 tgagtaaacaaaagtacagaaagaaagt 38324
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>emb|BX510321.9| Zebrafish DNA sequence from clone CH211-255P13 in linkage group 2,
              complete sequence
          Length = 160542

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 242    gagcatttcatctgaataat 261
              ||||||||||||||||||||
Sbjct: 136052 gagcatttcatctgaataat 136071
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>emb|CR759808.2| Human DNA sequence from clone DAMC-143C14 on chromosome 6, complete
            sequence
          Length = 104964

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 97   tgagtaaacaaaaatacagaaggaaagt 124
            ||||||||||||| ||||||| ||||||
Sbjct: 2975 tgagtaaacaaaagtacagaaagaaagt 3002
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>gb|AC022825.9| Homo sapiens chromosome 8, clone RP11-88J22, complete sequence
          Length = 191772

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 252    tctgaataattgaaggatcaaaca 275
              |||||||||||| |||||||||||
Sbjct: 122157 tctgaataattgtaggatcaaaca 122180
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>emb|CR753509.3| Human DNA sequence from clone DADB-246O10 on chromosome 6, complete
             sequence
          Length = 127540

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 97    tgagtaaacaaaaatacagaaggaaagt 124
             ||||||||||||| ||||||| ||||||
Sbjct: 79520 tgagtaaacaaaagtacagaaagaaagt 79547
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>gb|AC008829.7| Homo sapiens chromosome 5 clone CTD-2140K22, complete sequence
          Length = 159145

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 102   aaacaaaaatacagaaggaa 121
             ||||||||||||||||||||
Sbjct: 86124 aaacaaaaatacagaaggaa 86143
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>gb|AY016410.1| Bacillus thuringiensis PS167H2 binary insecticidal crystal protein
            operon, complete sequence
          Length = 2230

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 40   acattccaaaccttacaatt 59
            ||||||||||||||||||||
Sbjct: 1172 acattccaaaccttacaatt 1153
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>gb|AC079070.6| Homo sapiens chromosome 18, clone RP11-126K15, complete sequence
          Length = 191464

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 169   tactactatgcactactgta 188
             ||||||||||||||||||||
Sbjct: 15588 tactactatgcactactgta 15607
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>gb|AC105395.1| Homo sapiens chromosome 4 clone RP11-397A19, complete sequence
          Length = 162281

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 99    agtaaacaaaaatacagaag 118
             ||||||||||||||||||||
Sbjct: 49189 agtaaacaaaaatacagaag 49208
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>gb|AC026330.12| Homo sapiens 3 BAC RP11-414D23 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 188205

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 246   atttcatctgaataattgaa 265
             ||||||||||||||||||||
Sbjct: 62947 atttcatctgaataattgaa 62928
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>gb|CP000237.1| Neorickettsia sennetsu strain Miyayama, complete genome
          Length = 859006

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 56     aattttctcaaaatccactgcact 79
              |||||||||||||||||| |||||
Sbjct: 641243 aattttctcaaaatccacagcact 641266
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>gb|AC010947.6| Homo sapiens chromosome 18, clone RP11-25L3, complete sequence
          Length = 185470

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 169    tactactatgcactactgta 188
              ||||||||||||||||||||
Sbjct: 182735 tactactatgcactactgta 182754
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 44       tccaaaccttacaattttct 63
                ||||||||||||||||||||
Sbjct: 23429757 tccaaaccttacaattttct 23429776
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>emb|BX908738.4| Human DNA sequence from clone DAMA-148L19 on chromosome 6, complete
             sequence
          Length = 94877

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 97    tgagtaaacaaaaatacagaaggaaagt 124
             ||||||||||||| ||||||| ||||||
Sbjct: 93703 tgagtaaacaaaagtacagaaagaaagt 93730
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>emb|BX927232.4| Human DNA sequence from clone DAMA-334F21 on chromosome 6, complete
           sequence
          Length = 99722

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 97  tgagtaaacaaaaatacagaaggaaagt 124
           ||||||||||||| ||||||| ||||||
Sbjct: 826 tgagtaaacaaaagtacagaaagaaagt 853
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>gb|AC098828.3| Homo sapiens BAC clone RP11-644K8 from 2, complete sequence
          Length = 127408

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 49   accttacaattttctcaaaa 68
            ||||||||||||||||||||
Sbjct: 5578 accttacaattttctcaaaa 5559
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>gb|AC112510.9| Homo sapiens 3 BAC RP11-432A8 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 192749

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 112    acagaaggaaagtaaaagcg 131
              ||||||||||||||||||||
Sbjct: 180227 acagaaggaaagtaaaagcg 180246
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>gb|AY552581.1| Bacillus thuringiensis strain PS242K10 Cry35Ac-like gene, partial
           cds
          Length = 1053

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 40  acattccaaaccttacaatt 59
           ||||||||||||||||||||
Sbjct: 191 acattccaaaccttacaatt 172
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>dbj|BA000016.3| Clostridium perfringens str. 13 DNA, complete genome
          Length = 3031430

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 183     actgtatatatacctcttca 202
               ||||||||||||||||||||
Sbjct: 2428751 actgtatatatacctcttca 2428770
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>gb|AC101851.11| Mus musculus chromosome 7, clone RP23-276E14, complete sequence
          Length = 175088

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 105    caaaaatacagaaggaaagtaaaa 128
              ||||||||||||||||||| ||||
Sbjct: 125047 caaaaatacagaaggaaagaaaaa 125070
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>gb|AF083221.1|AF083221 Fugu rubripes putative neurotransmitter receptors, YDR140w homolog, and
             glycinamide ribonucleotide transformylase (GART) genes,
             complete cds
          Length = 43373

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 61    tctcaaaatccactgcacttacaa 84
             ||||||||||||||||| ||||||
Sbjct: 10937 tctcaaaatccactgcagttacaa 10960
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>gb|AC005827.3|AC005827 Homo sapiens clone 14503, complete sequence
          Length = 94376

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 246  atttcatctgaataattgaa 265
            ||||||||||||||||||||
Sbjct: 7253 atttcatctgaataattgaa 7234
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>gb|AE003573.4| Drosophila melanogaster chromosome X, section 74 of 74 of the complete
              sequence
          Length = 313035

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 135    ttttttagtttatatgtaca 154
              ||||||||||||||||||||
Sbjct: 275176 ttttttagtttatatgtaca 275157
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 44       tccaaaccttacaattttct 63
                ||||||||||||||||||||
Sbjct: 23357948 tccaaaccttacaattttct 23357967
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>emb|AL096770.17|HSBA150A6 Human DNA sequence from clone RP11-150A6 on chromosome 6 Contains genes
             OR5U1, OR5V1 and OR12D3 for olfactory receptors 5U1, 5V1
             and 12D3, the 3' end of olfactory receptor 2B4 pseudogene
             OR2B4P, a DDX6 (DEAD/H (Asp-Glu-Ala-Asp/His) box
             polypeptide 6 (RNA helicase, 54kD)) pseudogene, STSs and
             GSSs, complete sequence
          Length = 97392

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 97    tgagtaaacaaaaatacagaaggaaagt 124
             ||||||||||||| ||||||| ||||||
Sbjct: 11781 tgagtaaacaaaagtacagaaagaaagt 11808
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>emb|AL731784.3|CNS08C88 Oryza sativa chromosome 12, . BAC OSJNBa0016C14 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 162261

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 44    tccaaaccttacaattttct 63
             ||||||||||||||||||||
Sbjct: 72402 tccaaaccttacaattttct 72383
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>gb|AC145736.4| Mus musculus BAC clone RP24-296K18 from 9, complete sequence
          Length = 177964

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 103    aacaaaaatacagaaggaaa 122
              ||||||||||||||||||||
Sbjct: 113192 aacaaaaatacagaaggaaa 113211
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>emb|AL627392.12| Mouse DNA sequence from clone RP23-185I12 on chromosome 4, complete
             sequence
          Length = 182520

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 124   taaaagcgcccttttttagtttatatgt 151
             |||||||  |||||||||||||||||||
Sbjct: 17660 taaaagcatccttttttagtttatatgt 17633


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,858,188
Number of Sequences: 3902068
Number of extensions: 4858188
Number of successful extensions: 97484
Number of sequences better than 10.0: 58
Number of HSP's better than 10.0 without gapping: 58
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 97153
Number of HSP's gapped (non-prelim): 331
length of query: 458
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 436
effective length of database: 17,147,199,772
effective search space: 7476179100592
effective search space used: 7476179100592
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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