>EXG2_YEAST (P52911) Glucan 1,3-beta-glucosidase 2 precursor (EC 3.2.1.58)|
           (Exo-1,3-beta-glucanase 2)
          Length = 562

 Score = 35.0 bits (79), Expect = 0.10
 Identities = 19/88 (21%), Positives = 38/88 (43%)
 Frame = -1

Query: 360 TNYSSALSTVTKQNGPLTFVGEWVAEWQVPNATKEDLKMFANTQMDVYGKATFGWAYWTL 181
           T     + T   QN     + +W  ++      ++ ++ F   Q+  Y   T GW +W  
Sbjct: 406 TTNDKPVGTCISQNS----LADWTQDY------RDRVRQFIEAQLATYSSKTTGWIFW-- 453

Query: 180 KNVNNHWSMEWMIKNEYISLKI*DMFPT 97
                +W  E  ++ +Y+ LK  ++FP+
Sbjct: 454 -----NWKTEDAVEWDYLKLKEANLFPS 476

>MURE_NEIMA (Q9JSZ0) UDP-N-acetylmuramoylalanyl-D-glutamate--2,|
           6-diaminopimelate ligase (EC 6.3.2.13)
           (UDP-N-acetylmuramyl-tripeptide synthetase)
           (Meso-diaminopimelate-adding enzyme)
           (UDP-MurNAc-tripeptide synthetase)
          Length = 492

 Score = 33.9 bits (76), Expect = 0.23
 Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
 Frame = -1

Query: 294 WVAEWQVPNATKEDLKMFAN-TQMDVYGKATFGWAYWTLKNVNNHWSM-EWM 145
           W  EW+VPN   +DLK  A      VYG  + G  +W +   N   S+ +W+
Sbjct: 74  WNPEWKVPNQGIKDLKHRAGILAAQVYGNVSDGLKFWGVTGTNGKTSITQWL 125

>MURE_NEIMB (Q9K0Y9) UDP-N-acetylmuramoylalanyl-D-glutamate--2,|
           6-diaminopimelate ligase (EC 6.3.2.13)
           (UDP-N-acetylmuramyl-tripeptide synthetase)
           (Meso-diaminopimelate-adding enzyme)
           (UDP-MurNAc-tripeptide synthetase)
          Length = 492

 Score = 32.3 bits (72), Expect = 0.66
 Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
 Frame = -1

Query: 294 WVAEWQVPNATKEDLKMFAN-TQMDVYGKATFGWAYWTLKNVNNHWSM-EWM 145
           W  EW+VPN   +DLK  A      VYG  + G   W +   N   S+ +W+
Sbjct: 74  WNPEWKVPNQGIKDLKHRAGILAAQVYGNVSDGLKVWGVAGTNGKTSITQWL 125

>EXG_YARLI (Q12725) Glucan 1,3-beta-glucosidase precursor (EC 3.2.1.58)|
           (Exo-1,3-beta-glucanase)
          Length = 421

 Score = 31.6 bits (70), Expect = 1.1
 Identities = 12/38 (31%), Positives = 20/38 (52%)
 Frame = -1

Query: 261 KEDLKMFANTQMDVYGKATFGWAYWTLKNVNNHWSMEW 148
           K++ + +   Q+D +     GW YWT K  N   ++EW
Sbjct: 361 KQESRRYVEAQLDAWEHGGDGWIYWTYKTEN---ALEW 395

>EXG1_SCHPO (Q9URU6) Glucan 1,3-beta-glucosidase 1 precursor (EC 3.2.1.58)|
           (Exo-1,3-beta-glucanase)
          Length = 407

 Score = 31.2 bits (69), Expect = 1.5
 Identities = 31/127 (24%), Positives = 53/127 (41%), Gaps = 26/127 (20%)
 Frame = -1

Query: 441 VVDVHYYVLFNSMFDTFTVQQNIDFIKTNYSSALSTVTKQNGPLTFVGEW--------VA 286
           V+DVH Y L+ S   + T+  ++  + +   S  S+       +T  GEW        + 
Sbjct: 269 VMDVHRYQLYESDECSKTLDDHLSDVCSIGDSIASSPY-----ITVTGEWSGTLADCTIF 323

Query: 285 EWQVPNAT----------------KEDLKMFANTQMDVYGKATFGWAYWTLK--NVNNHW 160
           E  V ++T                K  +++F  TQ+D + +   GW YWT K    +  W
Sbjct: 324 EEGVDSSTFIGPNSGDISTWTDEYKGAVRLFIETQLDQFERGA-GWIYWTAKTGGPSPTW 382

Query: 159 SMEWMIK 139
            M  +I+
Sbjct: 383 DMGLLIE 389

>EXG1_HANAN (O93939) Glucan 1,3-beta-glucosidase 1 precursor (EC 3.2.1.58)|
           (Exo-1,3-beta-glucanase 1)
          Length = 498

 Score = 31.2 bits (69), Expect = 1.5
 Identities = 13/41 (31%), Positives = 21/41 (51%)
 Frame = -1

Query: 261 KEDLKMFANTQMDVYGKATFGWAYWTLKNVNNHWSMEWMIK 139
           KE+++ F   Q+  Y  +  GW +W  K  N   ++EW  K
Sbjct: 408 KENIRKFIEIQLLTYENSNSGWIFWNYKTEN---AIEWDFK 445

>EXG2_SCHPO (Q10444) Glucan 1,3-beta-glucosidase 2 precursor (EC 3.2.1.58)|
           (Exo-1,3-beta-glucanase)
          Length = 570

 Score = 30.8 bits (68), Expect = 1.9
 Identities = 29/154 (18%), Positives = 54/154 (35%), Gaps = 45/154 (29%)
 Frame = -1

Query: 450 PKAVVDVHYYVLFNSMFDTFTVQQNIDFIKTNYSSALSTVTKQNGPLTFVGEWV------ 289
           P  ++DVH Y++FN        +  ++ I  +++  +    K     T +GEW       
Sbjct: 391 PNILIDVHRYIIFNDFLIGLRPKDKLNVICKSWNEEMKLKAKLP---TIIGEWSLADTDC 447

Query: 288 ----------AEW-------------------------QVPNATKEDLKMF----ANTQM 226
                     A W                         Q P   ++  + F    A +Q+
Sbjct: 448 AKFLNNVGEGARWDGTFTPNGGVASCSEKVGCRCDFANQDPENYEDSYRKFLYALATSQI 507

Query: 225 DVYGKATFGWAYWTLKNVNNHWSMEWMIKNEYIS 124
           + + K T+GW YW     N   + +W  K  +++
Sbjct: 508 ETFDK-TWGWFYWNWDTEN---ATQWSYKKSWLA 537

>DPOL_METTH (O27276) DNA polymerase (EC 2.7.7.7)|
          Length = 586

 Score = 30.4 bits (67), Expect = 2.5
 Identities = 15/49 (30%), Positives = 22/49 (44%)
 Frame = -1

Query: 285 EWQVPNATKEDLKMFANTQMDVYGKATFGWAYWTLKNVNNHWSMEWMIK 139
           E ++ N  +E LK  ANT   VYG + F W           W  +++ K
Sbjct: 512 ERKILNVQQEALKRLANTMYGVYGYSRFRWYSMECAEAITAWGRDYIKK 560

>FLHA_ECOLI (P76298) Flagellar biosynthesis protein flhA|
          Length = 692

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 14/32 (43%), Positives = 20/32 (62%)
 Frame = +1

Query: 352 IVGLDEINVLLHGKSIKHAVEQHVVVHVNDGL 447
           IVG   + VL HG S+ HA E + ++ + DGL
Sbjct: 220 IVGGLLVGVLQHGMSMGHAAESYTLLTIGDGL 251

>POK11_HUMAN (P87893) HERV-K_22q11.21 provirus ancestral Pol protein (HERV-K101|
           Pol protein) [Includes: Reverse transcriptase (RT) (EC
           2.7.7.49)]
          Length = 254

 Score = 29.6 bits (65), Expect = 4.3
 Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 3/34 (8%)
 Frame = -1

Query: 315 PLTFVGE---WVAEWQVPNATKEDLKMFANTQMD 223
           PLT+  E   WV +WQ+P    E L + AN Q++
Sbjct: 25  PLTWKTEKPVWVNQWQLPKQKLEALHLLANEQLE 58

>EXG_CANAL (P29717) Glucan 1,3-beta-glucosidase precursor (EC 3.2.1.58)|
           (Exo-1,3-beta-glucanase)
          Length = 438

 Score = 29.6 bits (65), Expect = 4.3
 Identities = 16/61 (26%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
 Frame = -1

Query: 315 PLTFVGEWVAEWQVPNATKEDLKMFANTQMDVYGKATFGWAYWTLKNVN-NHWSMEWMIK 139
           P+  + +W  E       K D + +   Q+D + + T GW +W+ K  N   WS + +  
Sbjct: 366 PMLDISQWSDEH------KTDTRRYIEAQLDAF-EYTGGWVFWSWKTENAPEWSFQTLTY 418

Query: 138 N 136
           N
Sbjct: 419 N 419

>YBQ6_YEAST (P38081) Hypothetical 57.8 kDa protein in PRP6-MUM2 intergenic|
           region
          Length = 501

 Score = 29.3 bits (64), Expect = 5.6
 Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 7/49 (14%)
 Frame = -1

Query: 303 VGEW--VAEWQVPNATKED----LKMFANTQMDVYGK-ATFGWAYWTLK 178
           VGE+  V + Q  N T  D    ++ +  TQ DV+   A++GW +WTL+
Sbjct: 331 VGEFSGVLDGQTWNKTSGDRDAIVQKYVQTQADVFSHVASWGWFFWTLQ 379

>SPOT_AQUAE (O67012) Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase|
           (EC 3.1.7.2) ((ppGpp)ase) (Penta-phosphate
           guanosine-3'-pyrophosphohydrolase)
          Length = 696

 Score = 29.3 bits (64), Expect = 5.6
 Identities = 11/44 (25%), Positives = 20/44 (45%)
 Frame = -1

Query: 261 KEDLKMFANTQMDVYGKATFGWAYWTLKNVNNHWSMEWMIKNEY 130
           +E  K  A   M++Y         W++KN    W+ +++   EY
Sbjct: 153 EEKRKKIAKETMEIYAPLAHRLGVWSIKNELEDWAFKYLYPEEY 196

>UXAC_STRA5 (Q8E0M9) Uronate isomerase (EC 5.3.1.12) (Glucuronate isomerase)|
           (Uronic isomerase)
          Length = 466

 Score = 28.9 bits (63), Expect = 7.3
 Identities = 15/39 (38%), Positives = 18/39 (46%)
 Frame = -1

Query: 288 AEWQVPNATKEDLKMFANTQMDVYGKATFGWAYWTLKNV 172
           AE   P +  E  K FA T    YG   + W+   LKNV
Sbjct: 71  AEITGPASNLEKFKAFARTLERAYGNPVYHWSAMELKNV 109

>UXAC_STRA3 (Q8E6A3) Uronate isomerase (EC 5.3.1.12) (Glucuronate isomerase)|
           (Uronic isomerase)
          Length = 466

 Score = 28.9 bits (63), Expect = 7.3
 Identities = 15/39 (38%), Positives = 18/39 (46%)
 Frame = -1

Query: 288 AEWQVPNATKEDLKMFANTQMDVYGKATFGWAYWTLKNV 172
           AE   P +  E  K FA T    YG   + W+   LKNV
Sbjct: 71  AEITGPASNLEKFKAFARTLERAYGNPVYHWSAMELKNV 109

>HPPD_STRAW (Q53586) 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27)|
           (4HPPD) (HPD) (HPPDase)
          Length = 381

 Score = 28.9 bits (63), Expect = 7.3
 Identities = 13/53 (24%), Positives = 28/53 (52%)
 Frame = -1

Query: 375 IDFIKTNYSSALSTVTKQNGPLTFVGEWVAEWQVPNATKEDLKMFANTQMDVY 217
           ++ ++T  ++ +  +   +     +GEWV + +VP  T  +LK+ A+   D Y
Sbjct: 279 VETVRTMRAAGVQFLDTPDSYYDTLGEWVGDTRVPVDTLRELKILADRDEDGY 331

>FAS1_CANAL (P34731) Fatty acid synthase beta subunit (EC 2.3.1.86) [Includes:|
           3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase
           (EC 4.2.1.61); Enoyl-[acyl-carrier-protein] reductase
           [NADH] (EC 1.3.1.9); [Acyl-carrier-protein]
           acetyltransferase (EC 2.
          Length = 2037

 Score = 28.9 bits (63), Expect = 7.3
 Identities = 27/90 (30%), Positives = 41/90 (45%)
 Frame = +1

Query: 13  IIEIHLFTFNHFFLEMHQSFYKVISCGARRKHILDFQGDVLILDHPLHTPVVVYILESPI 192
           +IE  L +      ++H SF K+ + G    +IL +      L HP  TP   Y+L  P+
Sbjct: 173 LIEDLLVSIAEKLNQLHPSFDKIYTQGL---NILSW------LKHPETTPDQDYLLSVPV 223

Query: 193 SPSKRCLSIHIHLCICKHFEIFLRCIGHLP 282
           S    C+   I LC   H+ I  + +G  P
Sbjct: 224 SCPVICV---IQLC---HYTITCKVLGLTP 247


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 71,610,852
Number of Sequences: 219361
Number of extensions: 1490686
Number of successful extensions: 3963
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 3887
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3956
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3246866728
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)