>dbj|AB219366.1| Hordeum vulgare HvPIP2;1 mRNA for PIP aquaporin, complete cds
          Length = 1318

 Score =  615 bits (310), Expect = e-173
 Identities = 327/335 (97%)
 Strand = Plus / Minus

                                                                        
Query: 75   gagcgagcaaaagaaaagcacacttggaagaaacagcagcaagcaaacatggcgaactcc 134
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1261 gagcgagcaaaagaaaagcacacttggaagaaacagcagcaagcaaacatggcgaactcc 1202

                                                                        
Query: 135  ggaaacacgtcgacatacgaatggacggtcacatcaacatatgcacaagccgaggaacgg 194
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1201 ggaaacacgtcgacatacgaatggacggtcacatcaacatatgcacaagccgaggaacgg 1142

                                                                        
Query: 195  tagcagcagatgatgcgaagactggagccactgaaccaagcggggggatcgagcagccat 254
            ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 1141 tagcagcagatgatgcgaagactggagccactgaaccaagcggtgggatcgagcagccat 1082

                                                                        
Query: 255  agcgcattggctggaggcggccttcttcttcgcacatatctacacttcagtgnnnnnnnt 314
            ||||||||||||||||||||||||||||||||||||||||||||||||||||       |
Sbjct: 1081 agcgcattggctggaggcggccttcttcttcgcacatatctacacttcagtgccccccct 1022

                                                                        
Query: 315  cgcgcgtccggccggagctacgggcgacttagttgctcctgtaggacccgagcttggcgg 374
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 cgcgcgtccggccggagctacgggcgacttagttgctcctgtaggacccgagcttggcgg 962

                                               
Query: 375  cgctggccctcagcacatactggtggtaggcggcg 409
            |||||||||||||||||||||||||||||||||||
Sbjct: 961  cgctggccctcagcacatactggtggtaggcggcg 927

>dbj|AB009307.1| Hordeum vulgare HvPIP2;1 mRNA, complete cd
          Length = 1251

 Score =  615 bits (310), Expect = e-173
 Identities = 327/335 (97%)
 Strand = Plus / Minus

                                                                        
Query: 75   gagcgagcaaaagaaaagcacacttggaagaaacagcagcaagcaaacatggcgaactcc 134
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1181 gagcgagcaaaagaaaagcacacttggaagaaacagcagcaagcaaacatggcgaactcc 1122

                                                                        
Query: 135  ggaaacacgtcgacatacgaatggacggtcacatcaacatatgcacaagccgaggaacgg 194
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1121 ggaaacacgtcgacatacgaatggacggtcacatcaacatatgcacaagccgaggaacgg 1062

                                                                        
Query: 195  tagcagcagatgatgcgaagactggagccactgaaccaagcggggggatcgagcagccat 254
            ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 1061 tagcagcagatgatgcgaagactggagccactgaaccaagcggtgggatcgagcagccat 1002

                                                                        
Query: 255  agcgcattggctggaggcggccttcttcttcgcacatatctacacttcagtgnnnnnnnt 314
            ||||||||||||||||||||||||||||||||||||||||||||||||||||       |
Sbjct: 1001 agcgcattggctggaggcggccttcttcttcgcacatatctacacttcagtgccccccct 942

                                                                        
Query: 315  cgcgcgtccggccggagctacgggcgacttagttgctcctgtaggacccgagcttggcgg 374
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 941  cgcgcgtccggccggagctacgggcgacttagttgctcctgtaggacccgagcttggcgg 882

                                               
Query: 375  cgctggccctcagcacatactggtggtaggcggcg 409
            |||||||||||||||||||||||||||||||||||
Sbjct: 881  cgctggccctcagcacatactggtggtaggcggcg 847



 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 34/36 (94%)
 Strand = Plus / Minus

                                                
Query: 6    ttaaacgggaccaattctttggttaccaaattctcc 41
            |||||||| |||||||||||| ||||||||||||||
Sbjct: 1246 ttaaacggtaccaattctttgattaccaaattctcc 1211

>gb|AF139815.1|AF139815 Triticum aestivum plasma membrane intrinsic protein 2 (PIP2) mRNA,
            complete cds
          Length = 1235

 Score =  301 bits (152), Expect = 9e-79
 Identities = 204/220 (92%), Gaps = 6/220 (2%)
 Strand = Plus / Minus

                                                                        
Query: 91   agcacacttggaagaaacagcagcaagcaaacatggcgaactccggaaacacgtcgacat 150
            |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
Sbjct: 1145 agcacacttggaagaaacagcagcaagcaaacatggcgaactccggaa-cacgtcgacgt 1087

                                                                        
Query: 151  acgaatggacggtcacatcaacatatgcacaagccgaggaacggtagcagcagatgatgc 210
            ||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||
Sbjct: 1086 acgaatggacggtcacatcgacatatgcacaagccgaggaacggtagcagctgatgatgc 1027

                                                                        
Query: 211  gaagactggagccactga-----accaagcggggggatcgagcagccatagcgcattggc 265
             |||||||||||||||||     || |||  | ||||||||||| |||||||||||| ||
Sbjct: 1026 aaagactggagccactgaacaggacaaaggtgtgggatcgagcaaccatagcgcatttgc 967

                                                    
Query: 266  tggaggcggccttcttcttcgcacatatctacacttcagt 305
            ||||||||||||||||||||||||||||||||||||||||
Sbjct: 966  tggaggcggccttcttcttcgcacatatctacacttcagt 927



 Score =  147 bits (74), Expect = 3e-32
 Identities = 86/90 (95%)
 Strand = Plus / Minus

                                                                       
Query: 320 gtccggccggagctacgggcgacttagttgctcctgtaggacccgagcttggcggcgctg 379
           ||||||||||||| |||| || ||||||||||||||||||||||||||||||||||||||
Sbjct: 928 gtccggccggagcgacggccggcttagttgctcctgtaggacccgagcttggcggcgctg 869

                                         
Query: 380 gccctcagcacatactggtggtaggcggcg 409
           ||||||||||| ||||||||||||||||||
Sbjct: 868 gccctcagcacgtactggtggtaggcggcg 839

>ref|XM_466869.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1214

 Score =  111 bits (56), Expect = 2e-21
 Identities = 62/64 (96%)
 Strand = Plus / Minus

                                                                       
Query: 346 gttgctcctgtaggacccgagcttggcggcgctggccctcagcacatactggtggtaggc 405
           |||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 928 gttgctccggtaggacccgagcttggcggcgctggccctcagcacgtactggtggtaggc 869

               
Query: 406 ggcg 409
           ||||
Sbjct: 868 ggcg 865

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  111 bits (56), Expect = 2e-21
 Identities = 62/64 (96%)
 Strand = Plus / Minus

                                                                            
Query: 346      gttgctcctgtaggacccgagcttggcggcgctggccctcagcacatactggtggtaggc 405
                |||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 25184709 gttgctccggtaggacccgagcttggcggcgctggccctcagcacgtactggtggtaggc 25184650

                    
Query: 406      ggcg 409
                ||||
Sbjct: 25184649 ggcg 25184646

>dbj|AP006168.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:B1469H02
          Length = 136602

 Score =  111 bits (56), Expect = 2e-21
 Identities = 62/64 (96%)
 Strand = Plus / Minus

                                                                         
Query: 346   gttgctcctgtaggacccgagcttggcggcgctggccctcagcacatactggtggtaggc 405
             |||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 85102 gttgctccggtaggacccgagcttggcggcgctggccctcagcacgtactggtggtaggc 85043

                 
Query: 406   ggcg 409
             ||||
Sbjct: 85042 ggcg 85039

>dbj|AK061782.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-E03, full
           insert sequence
          Length = 1214

 Score =  111 bits (56), Expect = 2e-21
 Identities = 62/64 (96%)
 Strand = Plus / Minus

                                                                       
Query: 346 gttgctcctgtaggacccgagcttggcggcgctggccctcagcacatactggtggtaggc 405
           |||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 928 gttgctccggtaggacccgagcttggcggcgctggccctcagcacgtactggtggtaggc 869

               
Query: 406 ggcg 409
           ||||
Sbjct: 868 ggcg 865

>gb|BT018182.1| Zea mays clone EL01N0557H10.c mRNA sequence
          Length = 1215

 Score =  103 bits (52), Expect = 4e-19
 Identities = 61/64 (95%)
 Strand = Plus / Minus

                                                                       
Query: 346 gttgctcctgtaggacccgagcttggcggcgctggccctcagcacatactggtggtaggc 405
           |||||||| ||||||||||||||||| |||||||||||||||||| ||||||||||||||
Sbjct: 956 gttgctccggtaggacccgagcttggtggcgctggccctcagcacgtactggtggtaggc 897

               
Query: 406 ggcg 409
           ||||
Sbjct: 896 ggcg 893

>gb|AF326494.1|AF326494 Zea mays plasma membrane integral protein ZmPIP2-4 mRNA, complete
           cds
          Length = 1171

 Score =  103 bits (52), Expect = 4e-19
 Identities = 61/64 (95%)
 Strand = Plus / Minus

                                                                       
Query: 346 gttgctcctgtaggacccgagcttggcggcgctggccctcagcacatactggtggtaggc 405
           |||||||| ||||||||||||||||| |||||||||||||||||| ||||||||||||||
Sbjct: 948 gttgctccggtaggacccgagcttggtggcgctggccctcagcacgtactggtggtaggc 889

               
Query: 406 ggcg 409
           ||||
Sbjct: 888 ggcg 885

>gb|AF326493.1|AF326493 Zea mays plasma membrane integral protein ZmPIP2-3 mRNA, complete
           cds
          Length = 1156

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 60/64 (93%)
 Strand = Plus / Minus

                                                                       
Query: 346 gttgctcctgtaggacccgagcttggcggcgctggccctcagcacatactggtggtaggc 405
           |||||||| ||||||||||||||||| ||||||||| |||||||| ||||||||||||||
Sbjct: 938 gttgctccggtaggacccgagcttggtggcgctggctctcagcacgtactggtggtaggc 879

               
Query: 406 ggcg 409
           ||||
Sbjct: 878 ggcg 875

>gb|AY109332.1| Zea mays CL502_5 mRNA sequence
          Length = 1969

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 60/64 (93%)
 Strand = Plus / Minus

                                                                       
Query: 346 gttgctcctgtaggacccgagcttggcggcgctggccctcagcacatactggtggtaggc 405
           |||||||| ||||||||||||||||| ||||||||| |||||||| ||||||||||||||
Sbjct: 366 gttgctccggtaggacccgagcttggtggcgctggctctcagcacgtactggtggtaggc 307

               
Query: 406 ggcg 409
           ||||
Sbjct: 306 ggcg 303

>ref|XM_473219.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 873

 Score = 79.8 bits (40), Expect = 6e-12
 Identities = 46/48 (95%)
 Strand = Plus / Minus

                                                           
Query: 362 ccgagcttggcggcgctggccctcagcacatactggtggtaggcggcg 409
           |||||||||||||||||||||||||| || ||||||||||||||||||
Sbjct: 848 ccgagcttggcggcgctggccctcaggacgtactggtggtaggcggcg 801

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 79.8 bits (40), Expect = 6e-12
 Identities = 46/48 (95%)
 Strand = Plus / Minus

                                                                
Query: 362      ccgagcttggcggcgctggccctcagcacatactggtggtaggcggcg 409
                |||||||||||||||||||||||||| || ||||||||||||||||||
Sbjct: 26074840 ccgagcttggcggcgctggccctcaggacgtactggtggtaggcggcg 26074793

>emb|AL662958.3|OSJN00156 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0019D11,
              complete sequence
          Length = 163039

 Score = 79.8 bits (40), Expect = 6e-12
 Identities = 46/48 (95%)
 Strand = Plus / Minus

                                                              
Query: 362    ccgagcttggcggcgctggccctcagcacatactggtggtaggcggcg 409
              |||||||||||||||||||||||||| || ||||||||||||||||||
Sbjct: 109167 ccgagcttggcggcgctggccctcaggacgtactggtggtaggcggcg 109120

>gb|AY243802.1| Zea mays aquaporin (PIP2-5) mRNA, complete cds
          Length = 1104

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 37/38 (97%)
 Strand = Plus / Minus

                                                 
Query: 365 agcttggcggcgctggccctcagcacatactggtggta 402
           |||||||||||||||||||||||||| |||||||||||
Sbjct: 833 agcttggcggcgctggccctcagcacgtactggtggta 796

>gb|AF130975.1|AF130975 Zea mays plasma membrane intrinsic protein (pip2-5) mRNA, complete
           cds
          Length = 1207

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 37/38 (97%)
 Strand = Plus / Minus

                                                 
Query: 365 agcttggcggcgctggccctcagcacatactggtggta 402
           |||||||||||||||||||||||||| |||||||||||
Sbjct: 888 agcttggcggcgctggccctcagcacgtactggtggta 851

>dbj|AB219525.1| Hordeum vulgare HvPIP2;4 mRNA for PIP aquaporin isoform, complete
           cds
          Length = 1343

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 38/41 (92%)
 Strand = Plus / Minus

                                                    
Query: 362 ccgagcttggcggcgctggccctcagcacatactggtggta 402
           |||| ||||| |||||||||||||||||| |||||||||||
Sbjct: 918 ccgaacttggtggcgctggccctcagcacgtactggtggta 878

>gb|AC185988.2| Pan troglodytes BAC clone CH251-398L15 from chromosome 6, complete
              sequence
          Length = 148530

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 84     aaagaaaagcacacttggaagaaac 108
              |||||||| ||||||||||||||||
Sbjct: 110966 aaagaaaaacacacttggaagaaac 110990

>emb|AL590236.8| Human DNA sequence from clone RP11-145I17 on chromosome Xq21.1-21.33,
             complete sequence
          Length = 79387

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 84    aaagaaaagcacacttggaagaaac 108
             ||||||||| |||||||||||||||
Sbjct: 40318 aaagaaaagtacacttggaagaaac 40342

>emb|AL353153.18| Human DNA sequence from clone RP5-1000G17 on chromosome 6, complete
             sequence
          Length = 95430

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 84    aaagaaaagcacacttggaagaaac 108
             |||||||| ||||||||||||||||
Sbjct: 35576 aaagaaaaacacacttggaagaaac 35552

>gb|AC113580.3| Tetraodon nigroviridis clone GSTNA-28E1, complete sequence
          Length = 127223

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 161   ggtcacatcaacatatgcaca 181
             |||||||||||||||||||||
Sbjct: 33938 ggtcacatcaacatatgcaca 33958

>gb|AC119070.3| Homo sapiens BAC clone RP11-164M13 from 4, complete sequence
          Length = 34461

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 85    aagaaaagcacacttggaaga 105
             |||||||||||||||||||||
Sbjct: 18083 aagaaaagcacacttggaaga 18063

>dbj|AK120386.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013073J03, full
           insert sequence
          Length = 616

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 346 gttgctcctgtaggacccgagcttg 370
           |||||||| ||||||||||||||||
Sbjct: 288 gttgctccggtaggacccgagcttg 264

>emb|AL392086.14| Human DNA sequence from clone RP11-799O21 on chromosome 10 Contains the
              3' end of a novel gene and a novel gene, complete sequence
          Length = 220225

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 347    ttgctcctgtaggacccgag 366
              ||||||||||||||||||||
Sbjct: 100729 ttgctcctgtaggacccgag 100748

>emb|AL355485.9| Human DNA sequence from clone RP11-240M20 on chromosome 13, complete
             sequence
          Length = 149684

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 163   tcacatcaacatatgcacaa 182
             ||||||||||||||||||||
Sbjct: 78375 tcacatcaacatatgcacaa 78394

>emb|AL354720.14| Human DNA sequence from clone RP11-505F3 on chromosome 13 Contains the 3'
              end of the gene for progesterone-induced blocking factor 1
              (PIBF1), a proteasome (prosome, macropain) 26S subunit,
              non-ATPase, 10 (PSMD10) pseudogene, the KLF5 gene for
              Kruppel-like factor 5 (intestinal)(CKLF, IKLF, BTEB2), a
              fatty acid binding protein 5 (psoriasis-associated)
              (FABP5)(EFABP, E-FABP, PAFABP, PA-FABP) pseudogene and a
              CpG island, complete sequence
          Length = 199882

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 216    ctggagccactgaaccaagc 235
              ||||||||||||||||||||
Sbjct: 183049 ctggagccactgaaccaagc 183030

>gb|BC061498.1| Mus musculus SWI/SNF related, matrix associated, actin dependent
           regulator of chromatin, subfamily e, member 1, mRNA
           (cDNA clone MGC:70264 IMAGE:5251562), complete cds
          Length = 2386

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 317 cgcgtccggccggagctacgggcg 340
           ||||||||||||||||| ||||||
Sbjct: 5   cgcgtccggccggagctgcgggcg 28

>gb|AC010197.7| Homo sapiens 12p12p11-37.2-54.4 BAC RP11-92H16 (Roswell Park Cancer
             Institute Human BAC Library) complete sequence
          Length = 151011

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 85    aagaaaagcacacttggaag 104
             ||||||||||||||||||||
Sbjct: 79101 aagaaaagcacacttggaag 79120

>gb|AC009093.10| Homo sapiens chromosome 16 clone RP11-426C22, complete sequence
          Length = 207997

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 352    cctgtaggacccgagcttggcggc 375
              |||| |||||||||||||||||||
Sbjct: 193419 cctgcaggacccgagcttggcggc 193396

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 15      accaattctttggttaccaaattc 38
               |||||||||||| |||||||||||
Sbjct: 4045030 accaattctttgcttaccaaattc 4045007

>gb|AC138512.4| Homo sapiens chromosome 16 clone RP11-93B18, complete sequence
          Length = 159064

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 352   cctgtaggacccgagcttggcggc 375
             |||| |||||||||||||||||||
Sbjct: 53537 cctgcaggacccgagcttggcggc 53560

>gb|AC009490.10| Homo sapiens BAC clone RP11-355A23 from 2, complete sequence
          Length = 158692

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 84    aaagaaaagcacacttggaagaaa 107
             ||||||||| ||||||||||||||
Sbjct: 56776 aaagaaaagtacacttggaagaaa 56799

>gb|AC008041.5| Homo sapiens 3 BAC RPCI11-469J4 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 178896

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 357  aggacccgagcttggcggcg 376
            ||||||||||||||||||||
Sbjct: 3614 aggacccgagcttggcggcg 3633

>dbj|AP004307.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0534H07
          Length = 144689

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 15    accaattctttggttaccaaattc 38
             |||||||||||| |||||||||||
Sbjct: 37888 accaattctttgcttaccaaattc 37865

>gb|AF135398.1|AF135398 Thermus brockianus strain ITI360 putative galactoside binding protein
            (bdtE) gene, partial cds; and putative integral membrane
            protein (bdtF), putative integral membrane protein
            (bdtG), beta-galactosidase (bgaT), alpha-galactosidase
            (agaT), galactose-1-phosphate uridylyltransferase homolog
            (galT), glycerol kinase homolog (glpK), and glycerol
            dehydrogenase homolog (glpD) genes, complete cds
          Length = 10091

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 367  cttggcggcgctggccctca 386
            ||||||||||||||||||||
Sbjct: 2375 cttggcggcgctggccctca 2394

>gb|AC136837.1| Homo sapiens chromosome 16 clone RP11-483N11, complete sequence
          Length = 65756

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 352   cctgtaggacccgagcttggcggc 375
             |||| |||||||||||||||||||
Sbjct: 34175 cctgcaggacccgagcttggcggc 34152


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,785,085
Number of Sequences: 3902068
Number of extensions: 2785085
Number of successful extensions: 53568
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 53439
Number of HSP's gapped (non-prelim): 126
length of query: 410
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 388
effective length of database: 17,147,199,772
effective search space: 6653113511536
effective search space used: 6653113511536
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)