ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart46h08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_506635.1| PREDICTED Oryza sativa (japonica cultivar-group... 129 9e-27
2ref|XM_450158.1| Oryza sativa (japonica cultivar-group), mRNA 129 9e-27
3gb|AY224474.1| Oryza sativa (japonica cultivar-group) isolate 29... 129 9e-27
4dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 129 9e-27
5dbj|AP005583.3| Oryza sativa (japonica cultivar-group) genomic D... 129 9e-27
6dbj|AK104742.1| Oryza sativa (japonica cultivar-group) cDNA clon... 129 9e-27
7dbj|AK099394.1| Oryza sativa (japonica cultivar-group) cDNA clon... 129 9e-27
8dbj|AK061477.1| Oryza sativa (japonica cultivar-group) cDNA clon... 129 9e-27
9gb|AF029897.1|AF029897 Triticum aestivum acetyl-coenzyme A carbo... 72 2e-09
10gb|DQ295068.1| Secale cereale PKABA1 gene, partial sequence 66 1e-07
11dbj|AB178167.1| Triticum aestivum Wcbf2-2 mRNA for AP2/EREBP typ... 64 4e-07
12gb|AF099671.1|AF099671 Secale cereale thaumatin-like protein 2 p... 60 7e-06
13gb|AF099670.1|AF099670 Secale cereale thaumatin-like protein 3 p... 60 7e-06
14gb|AF096927.1|AF096927 Secale cereale thaumatin-like protein 1 p... 60 7e-06
15gb|AY105489.1| Zea mays PCO103470 mRNA sequence 58 3e-05
16gb|AY643844.1|AY643842S3 Hordeum vulgare subsp. vulgare clones B... 56 1e-04
17gb|AY663392.1| Triticum aestivum cultivar Renan clone BAC 930H14... 56 1e-04
18emb|AJ302096.1|ASP302096 Aegilops speltoides Pina gene for puroi... 56 1e-04
19emb|AJ400713.1|TAE400713 Triticum aestivum vp1B gene for VIVIPAR... 54 4e-04
20gb|AY485644.1| Triticum monococcum phosphatidylserine decarboxyl... 52 0.002
21gb|AF488415.1| Triticum monococcum chromosome 7Am BAC 5K14 compl... 50 0.007
22gb|AF376136.1|AF376136 Triticum aestivum putative CRT/DRE-bindin... 50 0.007
23gb|AF290567.1|AF290567 Brassica rapa plastid-lipid associated pr... 48 0.026
24gb|AF290564.1|AF290564 Brassica rapa plastid-lipid associated pr... 48 0.026
25gb|AF474071.1| Hordeum vulgare subsp. vulgare cultivar Morex BAC... 48 0.026
26gb|AY133248.1| Aegilops tauschii starch synthase II gene, comple... 46 0.10
27gb|BT014468.1| Lycopersicon esculentum clone 133815F, mRNA sequence 46 0.10
28gb|AY553259.1| Hordeum murinum isolate Hor_mur phosphoenolpyruva... 46 0.10
29emb|X83518.1|HVKNOX3 H.vulgare Knox3 gene 46 0.10
30dbj|AB201447.1| Triticum aestivum wSSII-D gene for starch syntha... 46 0.10
31emb|AM000057.1| Hordeum vulgare HKT1 gene for high-affinity sodi... 46 0.10
32gb|AF474373.1| Hordeum vulgare subsp. vulgare BAC 259I16, comple... 44 0.41
33gb|AY368673.1| Triticum turgidum HMW-glutenin locus, complete se... 44 0.41
34gb|AY230322.1| Triticum aestivum FCA-A1 (Fca) gene, partial cds 44 0.41
35gb|AY305853.1| Elaeis guineensis clone MLT2 fibrillin-like prote... 44 0.41
36gb|AC007876.2|AC007876 Homo sapiens BAC clone RP11-65G9 from Y, ... 44 0.41
37gb|AC002451.1| Homo sapiens BAC clone GS1-306C12 from 7, complet... 42 1.6
38dbj|AP007151.1| Aspergillus oryzae RIB40 genomic DNA, SC005 42 1.6
39gb|AC114648.25| Mus musculus chromosome 8, clone RP24-144H17, co... 42 1.6
40gb|AY951944.1| Triticum monococcum TmBAC 21C6 FR-Am2 locus, geno... 42 1.6
41gb|AC175833.2| Pan troglodytes BAC clone CH251-679G1 from chromo... 42 1.6
42gb|AC151987.4| Mus musculus BAC clone RP23-356C20 from chromosom... 42 1.6
43gb|AC140489.2| Mus musculus BAC clone RP24-144C10 from chromosom... 42 1.6
44dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
45gb|AC013418.32| Homo sapiens 12 BAC RP11-181C3 (Roswell Park Can... 42 1.6
46dbj|AP003873.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
47gb|AC168060.4| Mus musculus BAC clone RP23-305A9 from chromosome... 40 6.4
48gb|AY533687.1| Talaromyces wortmannii isolate W11 glyceraldehyde... 40 6.4
49gb|AY533686.1| Talaromyces wortmannii isolate W35 glyceraldehyde... 40 6.4
50gb|AC007441.9| Drosophila melanogaster clone BACR10E03, complete... 40 6.4
51gb|AF326781.1| Triticum monococcum actin (ACT-1) gene, partial c... 40 6.4
52ref|XM_427095.1| PREDICTED: Gallus gallus LOC429537 (LOC429537),... 40 6.4
53gb|BC004611.1| Mus musculus translin-associated factor X, mRNA (... 40 6.4
54gb|DQ280332.1| Rabies virus DA18 nucleoprotein gene, partial cds 40 6.4
55gb|AC102050.13| Mus musculus chromosome 8, clone RP23-389O4, com... 40 6.4
56gb|AY528693.1| Talaromyces flavus var. flavus isolate W11 glycer... 40 6.4
57ref|XM_001002375.1| PREDICTED: Mus musculus translin-associated ... 40 6.4
58gb|AC134837.3| Mus musculus BAC clone RP24-338L20 from chromosom... 40 6.4
59gb|AC131691.4| Mus musculus BAC clone RP23-388P2 from chromosome... 40 6.4
60gb|AC000065.1| Homo sapiens BAC clone CTB-85C5 from 7, complete ... 40 6.4
61gb|AC004831.1| Homo sapiens PAC clone RP4-538P11 from 7, complet... 40 6.4
62gb|AC120736.4| Rattus norvegicus 11 BAC CH230-252B13 (Children's... 40 6.4
63emb|AL592429.6| Human DNA sequence from clone RP11-12A2 on chrom... 40 6.4
64emb|AL049636.22|HSDJ792G4 Human DNA sequence from clone RP4-792G... 40 6.4
65emb|Z66528.1|HVGLTP4X3 H.vulgare ltp4.3 gene 40 6.4
66emb|AL672234.27| Mouse DNA sequence from clone RP23-356I16 on ch... 40 6.4
67emb|AL049655.2|ATF28P10 Arabidopsis thaliana DNA chromosome 3, B... 40 6.4
68emb|BX649529.23| Zebrafish DNA sequence from clone DKEYP-74F1 in... 40 6.4
69gb|AY128534.1| Homo sapiens cyclin-dependent kinase 6 (CDK6) gen... 40 6.4
70gb|AC099753.2| Homo sapiens chromosome 3 clone RP11-466A13, comp... 40 6.4
71dbj|AK146339.1| Mus musculus CRL-1722 L5178Y-R cDNA, RIKEN full-... 40 6.4
72dbj|AK159223.1| Mus musculus osteoclast-like cell cDNA, RIKEN fu... 40 6.4
73emb|AL672275.14| Mouse DNA sequence from clone RP23-89D4 on chro... 40 6.4
74emb|BX649370.5| Zebrafish DNA sequence from clone DKEY-97I11 in ... 40 6.4
75dbj|AK051915.1| Mus musculus 12 days embryo eyeball cDNA, RIKEN ... 40 6.4
76dbj|AK030407.1| Mus musculus adult male pituitary gland cDNA, RI... 40 6.4
77gb|AC146049.4| Pan troglodytes BAC clone RP43-72L7 from chromoso... 40 6.4
78gb|AC154549.2| Mus musculus BAC clone RP23-443L15 from chromosom... 40 6.4
79gb|AF396436.1| Tetrahymena thermophila strain SB210 mitochondrio... 40 6.4
80gb|AY943294.1| Hordeum vulgare subsp. vulgare clone BAC 673I14, ... 40 6.4
81gb|AF187040.1|AF187040 Mus musculus translin associated protein ... 40 6.4
82dbj|AK210102.1| Mus musculus cDNA, clone:Y2G0117F14, strand:plus... 40 6.4
83emb|AL672007.6| Mouse DNA sequence from clone RP23-421I14 on chr... 40 6.4
84emb|AJ296273.1|HVU296273 Hordeum vulgare aba7 gene for stress re... 40 6.4
85gb|AC154676.2| Mus musculus BAC clone RP23-146O19 from 17, compl... 40 6.4
86gb|AC119928.8| Mus musculus chromosome 1, clone RP24-259F2, comp... 40 6.4
87gb|AC006571.12|AC006571 Homo sapiens, clone hRPK.23_A_1, complet... 40 6.4
88gb|AE003703.3| Drosophila melanogaster chromosome 3R, section 41... 40 6.4
89ref|NM_016909.1| Mus musculus translin-associated factor X (Tsna... 40 6.4
90emb|AL844900.3| Mouse DNA sequence from clone RP23-301L16 on chr... 40 6.4
91emb|AL772196.13| Mouse DNA sequence from clone RP23-358M21 on ch... 40 6.4
92emb|AL669872.8| Mouse DNA sequence from clone RP23-357D5 on chro... 40 6.4 
>ref|XM_506635.1| PREDICTED Oryza sativa (japonica cultivar-group), P0406E03.32-1
           patrial mRNA
          Length = 954

 Score =  129 bits (65), Expect = 9e-27
 Identities = 140/165 (84%)
 Strand = Plus / Minus

                                                                       
Query: 297 gcttccttccttgaacagcacaaagatgctgctgccatctcctctagagattctaagctc 356
           |||||||||||| ||||| |||||||||||||||||||| ||||| ||||||||||||||
Sbjct: 711 gcttccttccttaaacagtacaaagatgctgctgccatcacctctggagattctaagctc 652

                                                                       
Query: 357 ggcatcaaggtaggttgtgagcagccaggacccagcactctcgctcctgaaaggtatctt 416
             ||||||||||||||||||||| ||| ||| ||||| | ||  |||| |  ||||||||
Sbjct: 651 atcatcaaggtaggttgtgagcaaccaagactcagcattgtcagtcctaattggtatctt 592

                                                        
Query: 417 cagtgggggctgaccggagatggtcttggcgaccgaggatgctgc 461
            ||||| || ||||| ||||||||  | || || |||||||||||
Sbjct: 591 tagtggaggttgaccagagatggttctagcaactgaggatgctgc 547
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>ref|XM_450158.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1243

 Score =  129 bits (65), Expect = 9e-27
 Identities = 140/165 (84%)
 Strand = Plus / Minus

                                                                        
Query: 297  gcttccttccttgaacagcacaaagatgctgctgccatctcctctagagattctaagctc 356
            |||||||||||| ||||| |||||||||||||||||||| ||||| ||||||||||||||
Sbjct: 1006 gcttccttccttaaacagtacaaagatgctgctgccatcacctctggagattctaagctc 947

                                                                        
Query: 357  ggcatcaaggtaggttgtgagcagccaggacccagcactctcgctcctgaaaggtatctt 416
              ||||||||||||||||||||| ||| ||| ||||| | ||  |||| |  ||||||||
Sbjct: 946  atcatcaaggtaggttgtgagcaaccaagactcagcattgtcagtcctaattggtatctt 887

                                                         
Query: 417  cagtgggggctgaccggagatggtcttggcgaccgaggatgctgc 461
             ||||| || ||||| ||||||||  | || || |||||||||||
Sbjct: 886  tagtggaggttgaccagagatggttctagcaactgaggatgctgc 842
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>gb|AY224474.1| Oryza sativa (japonica cultivar-group) isolate 29042 fibrillin-like
           protein mRNA, complete cds
          Length = 960

 Score =  129 bits (65), Expect = 9e-27
 Identities = 140/165 (84%)
 Strand = Plus / Minus

                                                                       
Query: 297 gcttccttccttgaacagcacaaagatgctgctgccatctcctctagagattctaagctc 356
           |||||||||||| ||||| |||||||||||||||||||| ||||| ||||||||||||||
Sbjct: 945 gcttccttccttaaacagtacaaagatgctgctgccatcacctctggagattctaagctc 886

                                                                       
Query: 357 ggcatcaaggtaggttgtgagcagccaggacccagcactctcgctcctgaaaggtatctt 416
             ||||||||||||||||||||| ||| ||| ||||| | ||  |||| |  ||||||||
Sbjct: 885 atcatcaaggtaggttgtgagcaaccaagactcagcattgtcagtcctaattggtatctt 826

                                                        
Query: 417 cagtgggggctgaccggagatggtcttggcgaccgaggatgctgc 461
            ||||| || ||||| ||||||||  | || || |||||||||||
Sbjct: 825 tagtggaggttgaccagagatggttctagcaactgaggatgctgc 781
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score =  129 bits (65), Expect = 9e-27
 Identities = 140/165 (84%)
 Strand = Plus / Minus

                                                                           
Query: 297     gcttccttccttgaacagcacaaagatgctgctgccatctcctctagagattctaagctc 356
               |||||||||||| ||||| |||||||||||||||||||| ||||| ||||||||||||||
Sbjct: 2499190 gcttccttccttaaacagtacaaagatgctgctgccatcacctctggagattctaagctc 2499131

                                                                           
Query: 357     ggcatcaaggtaggttgtgagcagccaggacccagcactctcgctcctgaaaggtatctt 416
                 ||||||||||||||||||||| ||| ||| ||||| | ||  |||| |  ||||||||
Sbjct: 2499130 atcatcaaggtaggttgtgagcaaccaagactcagcattgtcagtcctaattggtatctt 2499071

                                                            
Query: 417     cagtgggggctgaccggagatggtcttggcgaccgaggatgctgc 461
                ||||| || ||||| ||||||||  | || || |||||||||||
Sbjct: 2499070 tagtggaggttgaccagagatggttctagcaactgaggatgctgc 2499026
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>dbj|AP005583.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0406E03
          Length = 201069

 Score =  129 bits (65), Expect = 9e-27
 Identities = 140/165 (84%)
 Strand = Plus / Minus

                                                                         
Query: 297   gcttccttccttgaacagcacaaagatgctgctgccatctcctctagagattctaagctc 356
             |||||||||||| ||||| |||||||||||||||||||| ||||| ||||||||||||||
Sbjct: 85780 gcttccttccttaaacagtacaaagatgctgctgccatcacctctggagattctaagctc 85721

                                                                         
Query: 357   ggcatcaaggtaggttgtgagcagccaggacccagcactctcgctcctgaaaggtatctt 416
               ||||||||||||||||||||| ||| ||| ||||| | ||  |||| |  ||||||||
Sbjct: 85720 atcatcaaggtaggttgtgagcaaccaagactcagcattgtcagtcctaattggtatctt 85661

                                                          
Query: 417   cagtgggggctgaccggagatggtcttggcgaccgaggatgctgc 461
              ||||| || ||||| ||||||||  | || || |||||||||||
Sbjct: 85660 tagtggaggttgaccagagatggttctagcaactgaggatgctgc 85616
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>dbj|AK104742.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-E02, full
           insert sequence
          Length = 954

 Score =  129 bits (65), Expect = 9e-27
 Identities = 140/165 (84%)
 Strand = Plus / Minus

                                                                       
Query: 297 gcttccttccttgaacagcacaaagatgctgctgccatctcctctagagattctaagctc 356
           |||||||||||| ||||| |||||||||||||||||||| ||||| ||||||||||||||
Sbjct: 711 gcttccttccttaaacagtacaaagatgctgctgccatcacctctggagattctaagctc 652

                                                                       
Query: 357 ggcatcaaggtaggttgtgagcagccaggacccagcactctcgctcctgaaaggtatctt 416
             ||||||||||||||||||||| ||| ||| ||||| | ||  |||| |  ||||||||
Sbjct: 651 atcatcaaggtaggttgtgagcaaccaagactcagcattgtcagtcctaattggtatctt 592

                                                        
Query: 417 cagtgggggctgaccggagatggtcttggcgaccgaggatgctgc 461
            ||||| || ||||| ||||||||  | || || |||||||||||
Sbjct: 591 tagtggaggttgaccagagatggttctagcaactgaggatgctgc 547
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>dbj|AK099394.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000I12, full
            insert sequence
          Length = 1243

 Score =  129 bits (65), Expect = 9e-27
 Identities = 140/165 (84%)
 Strand = Plus / Minus

                                                                        
Query: 297  gcttccttccttgaacagcacaaagatgctgctgccatctcctctagagattctaagctc 356
            |||||||||||| ||||| |||||||||||||||||||| ||||| ||||||||||||||
Sbjct: 1006 gcttccttccttaaacagtacaaagatgctgctgccatcacctctggagattctaagctc 947

                                                                        
Query: 357  ggcatcaaggtaggttgtgagcagccaggacccagcactctcgctcctgaaaggtatctt 416
              ||||||||||||||||||||| ||| ||| ||||| | ||  |||| |  ||||||||
Sbjct: 946  atcatcaaggtaggttgtgagcaaccaagactcagcattgtcagtcctaattggtatctt 887

                                                         
Query: 417  cagtgggggctgaccggagatggtcttggcgaccgaggatgctgc 461
             ||||| || ||||| ||||||||  | || || |||||||||||
Sbjct: 886  tagtggaggttgaccagagatggttctagcaactgaggatgctgc 842
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>dbj|AK061477.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-F11, full
           insert sequence
          Length = 954

 Score =  129 bits (65), Expect = 9e-27
 Identities = 140/165 (84%)
 Strand = Plus / Minus

                                                                       
Query: 297 gcttccttccttgaacagcacaaagatgctgctgccatctcctctagagattctaagctc 356
           |||||||||||| ||||| |||||||||||||||||||| ||||| ||||||||||||||
Sbjct: 711 gcttccttccttaaacagtacaaagatgctgctgccatcacctctggagattctaagctc 652

                                                                       
Query: 357 ggcatcaaggtaggttgtgagcagccaggacccagcactctcgctcctgaaaggtatctt 416
             ||||||||||||||||||||| ||| ||| ||||| | ||  |||| |  ||||||||
Sbjct: 651 atcatcaaggtaggttgtgagcaaccaagactcagcattgtcagtcctaattggtatctt 592

                                                        
Query: 417 cagtgggggctgaccggagatggtcttggcgaccgaggatgctgc 461
            ||||| || ||||| ||||||||  | || || |||||||||||
Sbjct: 591 tagtggaggttgaccagagatggttctagcaactgaggatgctgc 547
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>gb|AF029897.1|AF029897 Triticum aestivum acetyl-coenzyme A carboxylase (Acc-1,1) gene,
            nuclear gene encoding plastid protein, partial cds
          Length = 9285

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 63/72 (87%), Gaps = 5/72 (6%)
 Strand = Plus / Minus

                                                                        
Query: 9    atataagagtgtttaaatcattaaaatagtgtaaagttctaaaccctcttatattagttt 68
            ||||||||||||||| |||| |||||||||||     ||||||| |||||||||||||||
Sbjct: 6448 atataagagtgtttagatcactaaaatagtgt-----tctaaacgctcttatattagttt 6394

                        
Query: 69   aaggagggagta 80
            | ||||||||||
Sbjct: 6393 acggagggagta 6382
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>gb|DQ295068.1| Secale cereale PKABA1 gene, partial sequence
          Length = 1082

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 36/37 (97%)
 Strand = Plus / Minus

                                                
Query: 46  tctaaaccctcttatattagtttaaggagggagtacc 82
           ||||||| |||||||||||||||||||||||||||||
Sbjct: 969 tctaaacgctcttatattagtttaaggagggagtacc 933



 Score = 40.1 bits (20), Expect = 6.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 54   ctcttatattagtttaaggagggagtac 81
            ||||||||||||||||  ||||||||||
Sbjct: 1000 ctcttatattagtttacagagggagtac 1027
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>dbj|AB178167.1| Triticum aestivum Wcbf2-2 mRNA for AP2/EREBP type transcription
           factor, complete cds
          Length = 941

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 62/72 (86%), Gaps = 5/72 (6%)
 Strand = Plus / Plus

                                                                       
Query: 9   atataagagtgtttaaatcattaaaatagtgtaaagttctaaaccctcttatattagttt 68
           |||||||||  ||||||||||||||||||||      ||||||| |||||||||||||||
Sbjct: 756 atataagagcatttaaatcattaaaatagtga-----tctaaacactcttatattagttt 810

                       
Query: 69  aaggagggagta 80
           | ||||||||||
Sbjct: 811 acggagggagta 822
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>gb|AF099671.1|AF099671 Secale cereale thaumatin-like protein 2 precursor (TLP2) mRNA,
           complete cds
          Length = 975

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 36/38 (94%)
 Strand = Plus / Plus

                                                 
Query: 44  gttctaaaccctcttatattagtttaaggagggagtac 81
           ||||||||| |||||||||||||||| |||||||||||
Sbjct: 688 gttctaaacactcttatattagtttacggagggagtac 725
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>gb|AF099670.1|AF099670 Secale cereale thaumatin-like protein 3 precursor (TLP3) gene,
           complete cds
          Length = 1003

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 36/38 (94%)
 Strand = Plus / Plus

                                                 
Query: 44  gttctaaaccctcttatattagtttaaggagggagtac 81
           ||||||||| |||||||||||||||| |||||||||||
Sbjct: 780 gttctaaacactcttatattagtttacggagggagtac 817
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>gb|AF096927.1|AF096927 Secale cereale thaumatin-like protein 1 precursor (TLP1) mRNA,
           complete cds
          Length = 1151

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 36/38 (94%)
 Strand = Plus / Plus

                                                 
Query: 44  gttctaaaccctcttatattagtttaaggagggagtac 81
           ||||||||| |||||||||||||||| |||||||||||
Sbjct: 678 gttctaaacactcttatattagtttacggagggagtac 715
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>gb|AY105489.1| Zea mays PCO103470 mRNA sequence
          Length = 1278

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 56/65 (86%)
 Strand = Plus / Minus

                                                                       
Query: 409 ggtatcttcagtgggggctgaccggagatggtcttggcgaccgaggatgctgcgttctcg 468
           ||||| |||||||| ||||| || || |||||||| || |||||||||||||| || |||
Sbjct: 938 ggtattttcagtggaggctggccagatatggtctttgcaaccgaggatgctgcattttcg 879

                
Query: 469 atcga 473
           |||||
Sbjct: 878 atcga 874



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 62/74 (83%)
 Strand = Plus / Minus

                                                                        
Query: 298  cttccttccttgaacagcacaaagatgctgctgccatctcctctagagattctaagctcg 357
            ||||| |||||||||||||||||||||| || ||| || ||||| ||||| || | ||| 
Sbjct: 1049 cttccctccttgaacagcacaaagatgccgccgccttcgcctctggagatcctgacctct 990

                          
Query: 358  gcatcaaggtaggt 371
             | |||||||||||
Sbjct: 989  tcgtcaaggtaggt 976
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>gb|AY643844.1|AY643842S3 Hordeum vulgare subsp. vulgare clones BAC 799C8 and 122A5 hardness locus
              region
          Length = 160897

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 61/72 (84%), Gaps = 5/72 (6%)
 Strand = Plus / Minus

                                                                          
Query: 9      atataagagtgtttaaatcattaaaatagtgtaaagttctaaaccctcttatattagttt 68
              |||||||||||||||||| | |||| ||||||     ||||||  |||||||||||||||
Sbjct: 150258 atataagagtgtttaaattactaaagtagtgt-----tctaaatgctcttatattagttt 150204

                          
Query: 69     aaggagggagta 80
              | ||||||||||
Sbjct: 150203 acggagggagta 150192



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                               
Query: 48     taaaccctcttatattagtttaaggagggagta 80
              ||||| ||||||||||||||||  |||||||||
Sbjct: 150244 taaacactcttatattagtttacagagggagta 150276
to top
>gb|AY663392.1| Triticum aestivum cultivar Renan clone BAC 930H14, complete sequence
          Length = 153766

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 34/36 (94%)
 Strand = Plus / Plus

                                                
Query: 46   tctaaaccctcttatattagtttaaggagggagtac 81
            ||||||| |||||||||||||||| |||||||||||
Sbjct: 6367 tctaaacgctcttatattagtttacggagggagtac 6402



 Score = 48.1 bits (24), Expect = 0.026
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                
Query: 46   tctaaaccctcttatattagtttaaggagggagtac 81
            ||||||| ||||||||||||||||  ||||||||||
Sbjct: 6351 tctaaacactcttatattagtttacagagggagtac 6316
to top
>emb|AJ302096.1|ASP302096 Aegilops speltoides Pina gene for puroindoline a, cultivar PI 393494
          Length = 2570

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 34/36 (94%)
 Strand = Plus / Plus

                                                
Query: 45   ttctaaaccctcttatattagtttaaggagggagta 80
            |||||||| |||||||||||||||| ||||||||||
Sbjct: 1438 ttctaaacgctcttatattagtttacggagggagta 1473



 Score = 48.1 bits (24), Expect = 0.026
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                
Query: 46   tctaaaccctcttatattagtttaaggagggagtac 81
            ||||||| ||||||||||||||||  ||||||||||
Sbjct: 1423 tctaaacgctcttatattagtttacagagggagtac 1388
to top
>emb|AJ400713.1|TAE400713 Triticum aestivum vp1B gene for VIVIPAROUS1, exons 1-6
          Length = 4034

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                               
Query: 46   tctaaaccctcttatattagtttaaggagggagta 80
            ||||||| |||||||||||||||| ||||||||||
Sbjct: 2745 tctaaacgctcttatattagtttacggagggagta 2711
to top
>gb|AY485644.1| Triticum monococcum phosphatidylserine decarboxylase, ZCCT2, ZCCT1, and
              SNF2P genes, complete cds; nucellin pseudogene, complete
              sequence; putative transposase, phosphatidylinositol
              phosphatidylcholine transfer protein sec14 cytosolic-like
              protein, and phytochrome P450-like protein genes, complete
              cds; and unknown genes
          Length = 438828

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                                
Query: 46     tctaaaccctcttatattagtttaaggagggagt 79
              ||||||| |||||||||||||||| |||||||||
Sbjct: 177694 tctaaactctcttatattagtttacggagggagt 177661
to top
>gb|AF488415.1| Triticum monococcum chromosome 7Am BAC 5K14 complete sequence
          Length = 168746

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                               
Query: 45     ttctaaaccctcttatattagtttaaggaggga 77
              |||||||| |||||||||||||||| |||||||
Sbjct: 103701 ttctaaacgctcttatattagtttacggaggga 103669
to top
>gb|AF376136.1|AF376136 Triticum aestivum putative CRT/DRE-binding factor (CBF1) mRNA,
           complete cds
          Length = 800

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 62/73 (84%), Gaps = 6/73 (8%)
 Strand = Plus / Plus

                                                                       
Query: 9   atataagagtgtttaaatcattaaaatagtgtaaagttctaaaccctcttatatt-agtt 67
           |||||||||  |||||||||||||||||||     | ||||||| |||||||||| ||||
Sbjct: 713 atataagagcatttaaatcattaaaatagt-----gatctaaacactcttatattaagtt 767

                        
Query: 68  taaggagggagta 80
           || ||||||||||
Sbjct: 768 tacggagggagta 780
to top
>gb|AF290567.1|AF290567 Brassica rapa plastid-lipid associated protein PAP2 gene, complete
            cds; nuclear gene for plastid product
          Length = 1057

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 48/56 (85%)
 Strand = Plus / Minus

                                                                    
Query: 297  gcttccttccttgaacagcacaaagatgctgctgccatctcctctagagattctaa 352
            ||||||||| ||||  |||||||||| ||| |  ||||||||||||||||| ||||
Sbjct: 1030 gcttccttctttgataagcacaaagacgcttccaccatctcctctagagatcctaa 975
to top
>gb|AF290564.1|AF290564 Brassica rapa plastid-lipid associated protein PAP2 mRNA, complete
           cds; nuclear gene for plastid product
          Length = 1151

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 48/56 (85%)
 Strand = Plus / Minus

                                                                   
Query: 297 gcttccttccttgaacagcacaaagatgctgctgccatctcctctagagattctaa 352
           ||||||||| ||||  |||||||||| ||| |  ||||||||||||||||| ||||
Sbjct: 964 gcttccttctttgataagcacaaagacgcttccaccatctcctctagagatcctaa 909
to top
>gb|AF474071.1| Hordeum vulgare subsp. vulgare cultivar Morex BAC clone 745c13,
             complete sequence
          Length = 102842

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                                 
Query: 45    ttctaaaccctcttatattagtttaaggagggagta 80
             |||||||  |||||||||||||||| ||||||||||
Sbjct: 34559 ttctaaatgctcttatattagtttacggagggagta 34594



 Score = 46.1 bits (23), Expect = 0.10
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                
Query: 46    tctaaaccctcttatattagtttaaggagggagta 80
             ||||||| ||||||||||||||||  |||||||||
Sbjct: 34544 tctaaacactcttatattagtttacagagggagta 34510
to top
>gb|AY133248.1| Aegilops tauschii starch synthase II gene, complete cds
          Length = 9024

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                               
Query: 46   tctaaaccctcttatattagtttaaggagggagta 80
            ||||||| ||||||||||| |||| ||||||||||
Sbjct: 2845 tctaaacgctcttatattaatttacggagggagta 2811
to top
>gb|BT014468.1| Lycopersicon esculentum clone 133815F, mRNA sequence
          Length = 1379

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                       
Query: 360  atcaaggtaggttgtgagcagccagga 386
            |||||||||||||||||| ||||||||
Sbjct: 1062 atcaaggtaggttgtgagaagccagga 1036
to top
>gb|AY553259.1| Hordeum murinum isolate Hor_mur phosphoenolpyruvate carboxylase
           (pepC) gene, exons 1, 2 and partial cds
          Length = 1117

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 54  ctcttatattagtttaaggagggagta 80
           |||||||||||||||| ||||||||||
Sbjct: 588 ctcttatattagtttacggagggagta 614
to top
>emb|X83518.1|HVKNOX3 H.vulgare Knox3 gene
          Length = 10815

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                               
Query: 46   tctaaaccctcttatattagtttaaggagggagta 80
            ||||||| ||||||||||||||||  |||||||||
Sbjct: 7585 tctaaacgctcttatattagtttacagagggagta 7619
to top
>dbj|AB201447.1| Triticum aestivum wSSII-D gene for starch synthase II-D, complete cds
          Length = 7010

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                               
Query: 46   tctaaaccctcttatattagtttaaggagggagta 80
            ||||||| ||||||||||| |||| ||||||||||
Sbjct: 1601 tctaaacgctcttatattaatttacggagggagta 1567
to top
>emb|AM000057.1| Hordeum vulgare HKT1 gene for high-affinity sodium transporter, exons
            1-3
          Length = 2155

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                               
Query: 46   tctaaaccctcttatattagtttaaggagggagta 80
            ||||||| ||||||||||||||||  |||||||||
Sbjct: 1304 tctaaacgctcttatattagtttacagagggagta 1338
to top
>gb|AF474373.1| Hordeum vulgare subsp. vulgare BAC 259I16, complete sequence
          Length = 124050

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                               
Query: 44    gttctaaaccctcttatattagtttaaggaggga 77
             ||||||||  |||||||||||||||| |||||||
Sbjct: 88569 gttctaaatgctcttatattagtttacggaggga 88536
to top
>gb|AY368673.1| Triticum turgidum HMW-glutenin locus, complete sequence
          Length = 285506

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                             
Query: 49  aaaccctcttatattagtttaaggagggagtacc 82
           |||| ||||||||||| |||| ||||||||||||
Sbjct: 797 aaacactcttatattaatttacggagggagtacc 830



 Score = 44.1 bits (22), Expect = 0.41
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                             
Query: 46  tctaaaccctcttatattagtttaaggagggagt 79
           ||||||| ||||||||||||||||  ||||||||
Sbjct: 778 tctaaacgctcttatattagtttactgagggagt 745
to top
>gb|AY230322.1| Triticum aestivum FCA-A1 (Fca) gene, partial cds
          Length = 9585

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                              
Query: 48   taaaccctcttatattagtttaaggagggagtac 81
            ||||| ||||||||||| |||| |||||||||||
Sbjct: 9214 taaacactcttatattaatttacggagggagtac 9247
to top
>gb|AY305853.1| Elaeis guineensis clone MLT2 fibrillin-like protein mRNA, partial
           cds
          Length = 638

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                             
Query: 338 ctctagagattctaagctcggcatcaaggtaggttgtgagcagccaggac 387
           |||| |||||| |||||||  | |||||||||||||| |||| |||||||
Sbjct: 471 ctcttgagattttaagctcctcgtcaaggtaggttgttagcaaccaggac 422
to top
>gb|AC007876.2|AC007876 Homo sapiens BAC clone RP11-65G9 from Y, complete sequence
          Length = 164879

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 228    attaatttccctttctccatgt 249
              ||||||||||||||||||||||
Sbjct: 155510 attaatttccctttctccatgt 155531
to top
>gb|AC002451.1| Homo sapiens BAC clone GS1-306C12 from 7, complete sequence
          Length = 157099

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 231    aatttccctttctccatgtca 251
              |||||||||||||||||||||
Sbjct: 133296 aatttccctttctccatgtca 133276
to top
>dbj|AP007151.1| Aspergillus oryzae RIB40 genomic DNA, SC005
          Length = 4429080

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 232    atttccctttctccatgtcag 252
              |||||||||||||||||||||
Sbjct: 974324 atttccctttctccatgtcag 974344
to top
>gb|AC114648.25| Mus musculus chromosome 8, clone RP24-144H17, complete sequence
          Length = 171191

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 267   atagatacgcctggcctatat 287
             |||||||||||||||||||||
Sbjct: 42527 atagatacgcctggcctatat 42547
to top
>gb|AY951944.1| Triticum monococcum TmBAC 21C6 FR-Am2 locus, genomic sequence
          Length = 190469

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 57    ttatattagtttaaggagggagtaccttt 85
             ||||||||||||||| |||||||| ||||
Sbjct: 89608 ttatattagtttaagaagggagtaacttt 89636
to top
>gb|AC175833.2| Pan troglodytes BAC clone CH251-679G1 from chromosome 7, complete
              sequence
          Length = 191935

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 231    aatttccctttctccatgtca 251
              |||||||||||||||||||||
Sbjct: 150069 aatttccctttctccatgtca 150089
to top
>gb|AC151987.4| Mus musculus BAC clone RP23-356C20 from chromosome 17, complete sequence
          Length = 245262

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 9      atataagagtgtttaaatcattaaa 33
              ||||||||||||||| |||||||||
Sbjct: 166330 atataagagtgtttagatcattaaa 166306
to top
>gb|AC140489.2| Mus musculus BAC clone RP24-144C10 from chromosome 1, complete sequence
          Length = 194368

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 309    gaacagcacaaagatgctgct 329
              |||||||||||||||||||||
Sbjct: 127736 gaacagcacaaagatgctgct 127716
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                                 
Query: 53       cctcttatattagtttaaggagggagtaccttt 85
                |||||||||||||  || |||||||||||||||
Sbjct: 24643975 cctcttatattagggtacggagggagtaccttt 24644007
to top
>gb|AC013418.32| Homo sapiens 12 BAC RP11-181C3 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 122292

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 112   gaaacaggcttacgaaggtag 132
             |||||||||||||||||||||
Sbjct: 76632 gaaacaggcttacgaaggtag 76612
to top
>dbj|AP003873.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1118_A06
          Length = 92836

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                              
Query: 53    cctcttatattagtttaaggagggagtaccttt 85
             |||||||||||||  || |||||||||||||||
Sbjct: 16279 cctcttatattagggtacggagggagtaccttt 16311
to top
>gb|AC168060.4| Mus musculus BAC clone RP23-305A9 from chromosome 8, complete sequence
          Length = 177422

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 366    gtaggttgtgagcagccagg 385
              ||||||||||||||||||||
Sbjct: 133845 gtaggttgtgagcagccagg 133826
to top
>gb|AY533687.1| Talaromyces wortmannii isolate W11 glyceraldehyde 3-phosphate
           dehydrogenase-like gene, partial sequence
          Length = 531

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 248 gtcagattctactcagagaa 267
           ||||||||||||||||||||
Sbjct: 203 gtcagattctactcagagaa 222
to top
>gb|AY533686.1| Talaromyces wortmannii isolate W35 glyceraldehyde 3-phosphate
           dehydrogenase-like gene, partial sequence
          Length = 522

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 248 gtcagattctactcagagaa 267
           ||||||||||||||||||||
Sbjct: 240 gtcagattctactcagagaa 259
to top
>gb|AC007441.9| Drosophila melanogaster clone BACR10E03, complete sequence
          Length = 195212

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 27    cattaaaatagtgtaaagttctaa 50
             ||||||||||||||||| ||||||
Sbjct: 92667 cattaaaatagtgtaaaattctaa 92644
to top
>gb|AF326781.1| Triticum monococcum actin (ACT-1) gene, partial cds; putative chromosome
              condensation factor (CCF), putative resistance protein
              (RGA-2), putative resistance protein (RGA2) and putative
              nodulin-like-like protein (NLL) gene, complete cds; and
              retrotransposons Josephine, Angela-2, Angela-4, Heidi,
              Greti, Angela-3, Fatima, Erika-1, Angela-6, Angela-5,
              Barbara, Isabelle, Erika-2, and Claudia
          Length = 211009

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 57     ttatattagtttaaggagggagta 80
              ||||||||||||| ||||||||||
Sbjct: 201049 ttatattagtttacggagggagta 201072
to top
>ref|XM_427095.1| PREDICTED: Gallus gallus LOC429537 (LOC429537), partial mRNA
          Length = 450

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 305 ccttgaacagcacaaagatg 324
           ||||||||||||||||||||
Sbjct: 101 ccttgaacagcacaaagatg 82
to top
>gb|BC004611.1| Mus musculus translin-associated factor X, mRNA (cDNA clone MGC:7979
            IMAGE:3585400), complete cds
          Length = 2309

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 366  gtaggttgtgagcagccagg 385
            ||||||||||||||||||||
Sbjct: 1642 gtaggttgtgagcagccagg 1661
to top
>gb|DQ280332.1| Rabies virus DA18 nucleoprotein gene, partial cds
          Length = 652

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 153 actacatatacatcacacga 172
           ||||||||||||||||||||
Sbjct: 591 actacatatacatcacacga 610
to top
>gb|AC102050.13| Mus musculus chromosome 8, clone RP23-389O4, complete sequence
          Length = 203942

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 366    gtaggttgtgagcagccagg 385
              ||||||||||||||||||||
Sbjct: 178918 gtaggttgtgagcagccagg 178937
to top
>gb|AY528693.1| Talaromyces flavus var. flavus isolate W11 glyceraldehyde
           3-phosphate dehydrogenase gene, partial cds
          Length = 531

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 248 gtcagattctactcagagaa 267
           ||||||||||||||||||||
Sbjct: 203 gtcagattctactcagagaa 222
to top
>ref|XM_001002375.1| PREDICTED: Mus musculus translin-associated factor X (Tsnax), mRNA
          Length = 2080

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 366  gtaggttgtgagcagccagg 385
            ||||||||||||||||||||
Sbjct: 1413 gtaggttgtgagcagccagg 1432
to top
>gb|AC134837.3| Mus musculus BAC clone RP24-338L20 from chromosome 16, complete sequence
          Length = 175319

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 307    ttgaacagcacaaagatgct 326
              ||||||||||||||||||||
Sbjct: 174134 ttgaacagcacaaagatgct 174115
to top
>gb|AC131691.4| Mus musculus BAC clone RP23-388P2 from chromosome 16, complete sequence
          Length = 202652

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 307    ttgaacagcacaaagatgct 326
              ||||||||||||||||||||
Sbjct: 135874 ttgaacagcacaaagatgct 135893
to top
>gb|AC000065.1| Homo sapiens BAC clone CTB-85C5 from 7, complete sequence
          Length = 82261

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 151   agactacatatacatcacac 170
             ||||||||||||||||||||
Sbjct: 81618 agactacatatacatcacac 81637
to top
>gb|AC004831.1| Homo sapiens PAC clone RP4-538P11 from 7, complete sequence
          Length = 186044

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 228   attaatttccctttctccat 247
             ||||||||||||||||||||
Sbjct: 31503 attaatttccctttctccat 31522
to top
>gb|AC120736.4| Rattus norvegicus 11 BAC CH230-252B13 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 82009

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 307   ttgaacagcacaaagatgct 326
             ||||||||||||||||||||
Sbjct: 60620 ttgaacagcacaaagatgct 60639
to top
>emb|AL592429.6| Human DNA sequence from clone RP11-12A2 on chromosome 6 Contains a DnaJ
              (Hsp40) homolog subfamily C member 7 (DNAJC7) pseudogene,
              the CITED2 gene for Cbp/p300-interacting transactivator
              with Glu/Asp-rich carboxy-terminal domain 2 (MRG1, P35SRJ)
              and a putative novel gene. Contains two CpG islands,
              complete sequence
          Length = 167460

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 219    ctactatctattaatttccctttc 242
              ||||||| ||||||||||||||||
Sbjct: 121951 ctactatttattaatttccctttc 121974
to top
>emb|AL049636.22|HSDJ792G4 Human DNA sequence from clone RP4-792G4 on chromosome 1p31.2-32.2
             Contains the 5' end of the ALG6 gene for asparagine-linked
             glycosylation 6 homolog (yeast alpha-1
             3-glucosyltransferase), a DnaJ (Hsp40) homolog subfamily C
             member 7 (DNAJC7) pseudogene, the FOXD3 gene for forkhead
             box D3, a novel gene, the 5' end of a novel gene and a CpG
             island, complete sequence
          Length = 142728

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 228   attaatttccctttctccat 247
             ||||||||||||||||||||
Sbjct: 48275 attaatttccctttctccat 48294
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>emb|Z66528.1|HVGLTP4X3 H.vulgare ltp4.3 gene
          Length = 1862

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                
Query: 46   tctaaaccctcttatattagtttaaggagggagtac 81
            ||||||| ||||||||||| || | |||||||||||
Sbjct: 1751 tctaaacgctcttatattacttcatggagggagtac 1786
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>emb|AL672234.27| Mouse DNA sequence from clone RP23-356I16 on chromosome 8, complete
              sequence
          Length = 221012

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 366    gtaggttgtgagcagccagg 385
              ||||||||||||||||||||
Sbjct: 175221 gtaggttgtgagcagccagg 175240
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>emb|AL049655.2|ATF28P10 Arabidopsis thaliana DNA chromosome 3, BAC clone F28P10
          Length = 90736

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 23    aaatcattaaaatagtgtaa 42
             ||||||||||||||||||||
Sbjct: 57064 aaatcattaaaatagtgtaa 57083
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>emb|BX649529.23| Zebrafish DNA sequence from clone DKEYP-74F1 in linkage group 17,
             complete sequence
          Length = 216647

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 26    tcattaaaatagtgtaaagt 45
             ||||||||||||||||||||
Sbjct: 69240 tcattaaaatagtgtaaagt 69259
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>gb|AY128534.1| Homo sapiens cyclin-dependent kinase 6 (CDK6) gene, complete cds
          Length = 220803

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 151    agactacatatacatcacac 170
              ||||||||||||||||||||
Sbjct: 146244 agactacatatacatcacac 146225
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>gb|AC099753.2| Homo sapiens chromosome 3 clone RP11-466A13, complete sequence
          Length = 171696

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 227   tattaatttccctttctccatgtc 250
             |||||||| |||||||||||||||
Sbjct: 44723 tattaattcccctttctccatgtc 44746
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>dbj|AK146339.1| Mus musculus CRL-1722 L5178Y-R cDNA, RIKEN full-length enriched
            library, clone:I730058E08 product:translin-associated
            factor X, full insert sequence
          Length = 2326

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 366  gtaggttgtgagcagccagg 385
            ||||||||||||||||||||
Sbjct: 1673 gtaggttgtgagcagccagg 1692
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>dbj|AK159223.1| Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched
            library, clone:I420010K18 product:translin-associated
            factor X, full insert sequence
          Length = 2390

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 366  gtaggttgtgagcagccagg 385
            ||||||||||||||||||||
Sbjct: 1742 gtaggttgtgagcagccagg 1761
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>emb|AL672275.14| Mouse DNA sequence from clone RP23-89D4 on chromosome X, complete
             sequence
          Length = 165401

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 366   gtaggttgtgagcagccagg 385
             ||||||||||||||||||||
Sbjct: 23015 gtaggttgtgagcagccagg 22996
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>emb|BX649370.5| Zebrafish DNA sequence from clone DKEY-97I11 in linkage group 24,
              complete sequence
          Length = 167578

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 3      actaatatataagagtgttt 22
              ||||||||||||||||||||
Sbjct: 120403 actaatatataagagtgttt 120384
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>dbj|AK051915.1| Mus musculus 12 days embryo eyeball cDNA, RIKEN full-length
           enriched library, clone:D230018K17
           product:unclassifiable, full insert sequence
          Length = 2524

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 307 ttgaacagcacaaagatgct 326
           ||||||||||||||||||||
Sbjct: 951 ttgaacagcacaaagatgct 970
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>dbj|AK030407.1| Mus musculus adult male pituitary gland cDNA, RIKEN full-length
            enriched library, clone:5330407L23
            product:translin-associated factor X, full insert
            sequence
          Length = 2324

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 366  gtaggttgtgagcagccagg 385
            ||||||||||||||||||||
Sbjct: 1670 gtaggttgtgagcagccagg 1689
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>gb|AC146049.4| Pan troglodytes BAC clone RP43-72L7 from chromosome 7, complete
             sequence
          Length = 154822

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 228   attaatttccctttctccat 247
             ||||||||||||||||||||
Sbjct: 67443 attaatttccctttctccat 67462
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>gb|AC154549.2| Mus musculus BAC clone RP23-443L15 from chromosome 17, complete sequence
          Length = 191523

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 9      atataagagtgtttaaatcattaa 32
              ||||||||||||||| ||||||||
Sbjct: 108915 atataagagtgtttagatcattaa 108938
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>gb|AF396436.1| Tetrahymena thermophila strain SB210 mitochondrion, complete genome
          Length = 47577

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 19    gtttaaatcattaaaatagt 38
             ||||||||||||||||||||
Sbjct: 36597 gtttaaatcattaaaatagt 36578
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>gb|AY943294.1| Hordeum vulgare subsp. vulgare clone BAC 673I14, complete sequence
          Length = 108608

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 54    ctcttatattagtttaaggagggagtac 81
             |||||||||||||||| ||||| |||||
Sbjct: 73076 ctcttatattagtttacggaggaagtac 73049
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>gb|AF187040.1|AF187040 Mus musculus translin associated protein X (Trax) mRNA, complete cds
          Length = 2410

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 366  gtaggttgtgagcagccagg 385
            ||||||||||||||||||||
Sbjct: 1740 gtaggttgtgagcagccagg 1759
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>dbj|AK210102.1| Mus musculus cDNA, clone:Y2G0117F14, strand:plus,
           reference:ENSEMBL:Mouse-Transcript-
           ENST:ENSMUST00000048082, based on BLAT search
          Length = 412

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 366 gtaggttgtgagcagccagg 385
           ||||||||||||||||||||
Sbjct: 92  gtaggttgtgagcagccagg 111
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>emb|AL672007.6| Mouse DNA sequence from clone RP23-421I14 on chromosome X, complete
             sequence
          Length = 118509

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 9     atataagagtgtttaaatcattaa 32
             ||||| ||||||||||||||||||
Sbjct: 71373 atataggagtgtttaaatcattaa 71396
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>emb|AJ296273.1|HVU296273 Hordeum vulgare aba7 gene for stress responsive protein
          Length = 1841

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 54  ctcttatattagtttaaggagggagtac 81
           |||||||||||||||| ||||| |||||
Sbjct: 630 ctcttatattagtttacggaggaagtac 603
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>gb|AC154676.2| Mus musculus BAC clone RP23-146O19 from 17, complete sequence
          Length = 180352

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 9     atataagagtgtttaaatcattaa 32
             ||||||||||||||| ||||||||
Sbjct: 40565 atataagagtgtttagatcattaa 40588
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>gb|AC119928.8| Mus musculus chromosome 1, clone RP24-259F2, complete sequence
          Length = 174419

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 366    gtaggttgtgagcagccagg 385
              ||||||||||||||||||||
Sbjct: 142974 gtaggttgtgagcagccagg 142955
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>gb|AC006571.12|AC006571 Homo sapiens, clone hRPK.23_A_1, complete sequence
          Length = 134896

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 219   ctactatctattaatttccctttc 242
             ||||||| ||||||||||||||||
Sbjct: 37535 ctactatttattaatttccctttc 37558
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>gb|AE003703.3| Drosophila melanogaster chromosome 3R, section 41 of 118 of the
             complete sequence
          Length = 223948

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 27    cattaaaatagtgtaaagttctaa 50
             ||||||||||||||||| ||||||
Sbjct: 27571 cattaaaatagtgtaaaattctaa 27548
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>ref|NM_016909.1| Mus musculus translin-associated factor X (Tsnax), mRNA
          Length = 2410

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 366  gtaggttgtgagcagccagg 385
            ||||||||||||||||||||
Sbjct: 1740 gtaggttgtgagcagccagg 1759
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>emb|AL844900.3| Mouse DNA sequence from clone RP23-301L16 on chromosome X, complete
            sequence
          Length = 183256

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 3    actaatatataagagtgttt 22
            ||||||||||||||||||||
Sbjct: 7325 actaatatataagagtgttt 7344
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>emb|AL772196.13| Mouse DNA sequence from clone RP23-358M21 on chromosome 4, complete
              sequence
          Length = 238016

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 9      atataagagtgtttaaatcattaa 32
              ||||| ||||||||||||||||||
Sbjct: 118244 atataggagtgtttaaatcattaa 118221
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>emb|AL669872.8| Mouse DNA sequence from clone RP23-357D5 on chromosome 3, complete
             sequence
          Length = 199673

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 377   gcagccaggacccagcactctcgc 400
             |||||||||||| |||||||||||
Sbjct: 17375 gcagccaggaccaagcactctcgc 17352


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,790,338
Number of Sequences: 3902068
Number of extensions: 4790338
Number of successful extensions: 75287
Number of sequences better than 10.0: 92
Number of HSP's better than 10.0 without gapping: 92
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 75031
Number of HSP's gapped (non-prelim): 246
length of query: 473
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 451
effective length of database: 17,147,199,772
effective search space: 7733387097172
effective search space used: 7733387097172
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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