ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart46h05
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1HGP1_HAEIN (P44795) Probable hemoglobin and hemoglobin-haptoglob... 29 5.9

>HGP1_HAEIN (P44795) Probable hemoglobin and hemoglobin-haptoglobin-binding|
            protein 1 precursor
          Length = 1063

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
 Frame = +2

Query: 131  NDLETSFAQPTPPFYLLNQLAAAIS*QCQSINQLTGATSIYST*WSAPT-PWFSGGHLNP 307
            N L + +A+    F  LN    AI+ Q Q +N L   TS+Y+  + AP+  W    ++  
Sbjct: 882  NKLRSGYAE----FLKLNPQYTAIASQDQPMNALQPTTSVYNIGYDAPSKKWGMDVYITD 937

Query: 308  DAGKK 322
             A KK
Sbjct: 938  VAAKK 942


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 55,978,930
Number of Sequences: 219361
Number of extensions: 1026798
Number of successful extensions: 2098
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 2062
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2094
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2628831825
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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