ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart46h01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY103818.1| Zea mays PCO124949 mRNA sequence 125 1e-25
2gb|BT016262.1| Zea mays clone Contig95 mRNA sequence 117 3e-23
3ref|XM_477795.1| Oryza sativa (japonica cultivar-group), mRNA 115 1e-22
4dbj|AK101316.1| Oryza sativa (japonica cultivar-group) cDNA clon... 115 1e-22
5dbj|AK061408.1| Oryza sativa (japonica cultivar-group) cDNA clon... 115 1e-22
6dbj|AK061383.1| Oryza sativa (japonica cultivar-group) cDNA clon... 115 1e-22
7dbj|AB037153.1| Oryza sativa (japonica cultivar-group) OsRPN12 m... 115 1e-22
8dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 72 2e-09
9dbj|AP005200.4| Oryza sativa (japonica cultivar-group) genomic D... 72 2e-09
10ref|XM_809423.1| Trypanosoma cruzi strain CL Brener hypothetical... 42 1.5
11ref|XM_816110.1| Trypanosoma cruzi strain CL Brener hypothetical... 42 1.5
12dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, c... 42 1.5
13gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete... 42 1.5
14ref|NM_103942.2| Arabidopsis thaliana transcription factor AT1G5... 40 6.1
15ref|NM_102265.2| Arabidopsis thaliana unknown protein AT1G24190 ... 40 6.1
16gb|AC099641.8| Mus musculus chromosome 1, clone RP24-342C13, com... 40 6.1
17gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome 40 6.1
18ref|NM_016924.1| Mus musculus open reading frame 5 (ORF5), mRNA 40 6.1
19gb|BT000883.1| Arabidopsis thaliana clone C105359 putative scare... 40 6.1
20gb|AC144510.1| Pan troglodytes BAC clone RP43-18C13 from 7, comp... 40 6.1
21emb|AL590727.5| Human DNA sequence from clone RP11-111D3 on chro... 40 6.1
22gb|AY034929.1| Arabidopsis thaliana putative scarecrow protein (... 40 6.1
23gb|AF535436.1| HIV-1 isolate 88USMF880113sg from USA envelope gl... 40 6.1
24gb|AC182752.1| Gasterosteus aculeatus clone VMRC26-161K14, compl... 40 6.1
25gb|BC002143.1| Mus musculus open reading frame 5, mRNA (cDNA clo... 40 6.1
26gb|AC140319.3| Mus musculus BAC clone RP23-413L6 from chromosome... 40 6.1
27dbj|AK084966.1| Mus musculus 13 days embryo lung cDNA, RIKEN ful... 40 6.1
28dbj|AK002746.1| Mus musculus adult male kidney cDNA, RIKEN full-... 40 6.1
29gb|AY039611.1| Arabidopsis thaliana F17J6.12/F17J6.12 mRNA, comp... 40 6.1
30gb|AC163028.5| Mus musculus chromosome 1, clone RP23-393I22, com... 40 6.1
31gb|AC135782.4| Homo sapiens chromosome 16 clone CTD-2555A7, comp... 40 6.1
32gb|AC079279.4|AC079279 Arabidopsis thaliana chromosome 1 BAC F17... 40 6.1
33dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 6.1
34gb|AC012561.2|AC012561 Arabidopsis thaliana chromosome I BAC F11... 40 6.1
35gb|AF036302.1|AF036302 Arabidopsis thaliana scarecrow-like 5 (SC... 40 6.1
36gb|AF177771.1|AF177771 Mus musculus orf5 protein mRNA, complete cds 40 6.1
37gb|AC154631.2| Mus musculus BAC clone RP23-264F8 from 16, comple... 40 6.1
38gb|AC003975.1|AC003975 Human Cosmid g5129s420 from 7q31.3, compl... 40 6.1
39dbj|AP006096.1| Lotus japonicus genomic DNA, chromosome 4, clone... 40 6.1
40gb|AC002396.1| Arabidopsis thaliana chromosome I BAC F3I6 genomi... 40 6.1 
>gb|AY103818.1| Zea mays PCO124949 mRNA sequence
          Length = 1251

 Score =  125 bits (63), Expect = 1e-25
 Identities = 174/211 (82%)
 Strand = Plus / Minus

                                                                       
Query: 243 atctccttgcagggctgcgactccttcgccttctggaacaagacgctgccgtccttgaca 302
           ||||||||||||||||| |||||||||||||||||||| |||||    |||| ||| |  
Sbjct: 948 atctccttgcagggctgtgactccttcgccttctggaagaagacagcaccgttcttaatc 889

                                                                       
Query: 303 tcccactcggggtgttcctctgcgatgtactgctgcagttccttgtcggagctgaacata 362
           ||||| || ||||| ||||| | ||||||||  ||||| || | ||| || |||||||||
Sbjct: 888 tcccattccgggtgctcctcagtgatgtactcgtgcagatcttggtcagaactgaacata 829

                                                                       
Query: 363 aacatctgcttcgcatcgcttattgacaggtaatcatatcccttctcgctgcacccagct 422
           | ||| ||||| ||||| || |  || ||  ||||||| ||||| |||||||||||||| 
Sbjct: 828 agcatttgctttgcatcactcacagatagagaatcataccccttttcgctgcacccagcg 769

                                          
Query: 423 atctcgtctctaaccgttttggcgagaaggt 453
           ||||| |||||||| ||||||||||||||||
Sbjct: 768 atctcatctctaactgttttggcgagaaggt 738
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>gb|BT016262.1| Zea mays clone Contig95 mRNA sequence
          Length = 1020

 Score =  117 bits (59), Expect = 3e-23
 Identities = 173/211 (81%)
 Strand = Plus / Minus

                                                                       
Query: 243 atctccttgcagggctgcgactccttcgccttctggaacaagacgctgccgtccttgaca 302
           ||||||||||||||||| || ||||||||||||||||| |||||    |||| ||| |  
Sbjct: 742 atctccttgcagggctgtgattccttcgccttctggaagaagacagcaccgttcttaatc 683

                                                                       
Query: 303 tcccactcggggtgttcctctgcgatgtactgctgcagttccttgtcggagctgaacata 362
           ||||| || ||||| ||||| | ||||||||  ||||| || | ||| || |||||||||
Sbjct: 682 tcccattccgggtgctcctcagtgatgtactcgtgcagatcttggtcagaactgaacata 623

                                                                       
Query: 363 aacatctgcttcgcatcgcttattgacaggtaatcatatcccttctcgctgcacccagct 422
           | ||| ||||| ||||| || |  || ||  ||||||| ||||| |||||||||||||| 
Sbjct: 622 agcatttgctttgcatcactcacagatagagaatcataccccttttcgctgcacccagcg 563

                                          
Query: 423 atctcgtctctaaccgttttggcgagaaggt 453
           ||||| |||||||| ||||||||||||||||
Sbjct: 562 atctcatctctaactgttttggcgagaaggt 532
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>ref|XM_477795.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 804

 Score =  115 bits (58), Expect = 1e-22
 Identities = 106/122 (86%)
 Strand = Plus / Minus

                                                                       
Query: 240 ggtatctccttgcagggctgcgactccttcgccttctggaacaagacgctgccgtccttg 299
           |||||||||||||||||||| | |||||||||||||||||| ||||||   || ||||| 
Sbjct: 743 ggtatctccttgcagggctgggtctccttcgccttctggaagaagacggaaccatccttt 684

                                                                       
Query: 300 acatcccactcggggtgttcctctgcgatgtactgctgcagttccttgtcggagctgaac 359
           || ||||| || ||||| ||||||||||||||||| |||| ||| ||||| |||||||||
Sbjct: 683 acctcccattcagggtgctcctctgcgatgtactggtgcaattctttgtcagagctgaac 624

             
Query: 360 at 361
           ||
Sbjct: 623 at 622
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>dbj|AK101316.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033034D03, full
           insert sequence
          Length = 1218

 Score =  115 bits (58), Expect = 1e-22
 Identities = 106/122 (86%)
 Strand = Plus / Minus

                                                                       
Query: 240 ggtatctccttgcagggctgcgactccttcgccttctggaacaagacgctgccgtccttg 299
           |||||||||||||||||||| | |||||||||||||||||| ||||||   || ||||| 
Sbjct: 823 ggtatctccttgcagggctgggtctccttcgccttctggaagaagacggaaccatccttt 764

                                                                       
Query: 300 acatcccactcggggtgttcctctgcgatgtactgctgcagttccttgtcggagctgaac 359
           || ||||| || ||||| ||||||||||||||||| |||| ||| ||||| |||||||||
Sbjct: 763 acctcccattcagggtgctcctctgcgatgtactggtgcaattctttgtcagagctgaac 704

             
Query: 360 at 361
           ||
Sbjct: 703 at 702
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>dbj|AK061408.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-A10, full
           insert sequence
          Length = 1053

 Score =  115 bits (58), Expect = 1e-22
 Identities = 106/122 (86%)
 Strand = Plus / Minus

                                                                       
Query: 240 ggtatctccttgcagggctgcgactccttcgccttctggaacaagacgctgccgtccttg 299
           |||||||||||||||||||| | |||||||||||||||||| ||||||   || ||||| 
Sbjct: 822 ggtatctccttgcagggctgggtctccttcgccttctggaagaagacggaaccatccttt 763

                                                                       
Query: 300 acatcccactcggggtgttcctctgcgatgtactgctgcagttccttgtcggagctgaac 359
           || ||||| || ||||| ||||||||||||||||| |||| ||| ||||| |||||||||
Sbjct: 762 acctcccattcagggtgctcctctgcgatgtactggtgcaattctttgtcagagctgaac 703

             
Query: 360 at 361
           ||
Sbjct: 702 at 701
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>dbj|AK061383.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-304-H08, full
           insert sequence
          Length = 1230

 Score =  115 bits (58), Expect = 1e-22
 Identities = 106/122 (86%)
 Strand = Plus / Minus

                                                                       
Query: 240 ggtatctccttgcagggctgcgactccttcgccttctggaacaagacgctgccgtccttg 299
           |||||||||||||||||||| | |||||||||||||||||| ||||||   || ||||| 
Sbjct: 834 ggtatctccttgcagggctgggtctccttcgccttctggaagaagacggaaccatccttt 775

                                                                       
Query: 300 acatcccactcggggtgttcctctgcgatgtactgctgcagttccttgtcggagctgaac 359
           || ||||| || ||||| ||||||||||||||||| |||| ||| ||||| |||||||||
Sbjct: 774 acctcccattcagggtgctcctctgcgatgtactggtgcaattctttgtcagagctgaac 715

             
Query: 360 at 361
           ||
Sbjct: 714 at 713
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>dbj|AB037153.1| Oryza sativa (japonica cultivar-group) OsRPN12 mRNA for 26S
           proteasome regulatory particle non-ATPase subunit12,
           complete cds
          Length = 1063

 Score =  115 bits (58), Expect = 1e-22
 Identities = 106/122 (86%)
 Strand = Plus / Minus

                                                                       
Query: 240 ggtatctccttgcagggctgcgactccttcgccttctggaacaagacgctgccgtccttg 299
           |||||||||||||||||||| | |||||||||||||||||| ||||||   || ||||| 
Sbjct: 818 ggtatctccttgcagggctgggtctccttcgccttctggaagaagacggaaccatccttt 759

                                                                       
Query: 300 acatcccactcggggtgttcctctgcgatgtactgctgcagttccttgtcggagctgaac 359
           || ||||| || ||||| ||||||||||||||||| |||| ||| ||||| |||||||||
Sbjct: 758 acctcccattcagggtgctcctctgcgatgtactggtgcaattctttgtcagagctgaac 699

             
Query: 360 at 361
           ||
Sbjct: 698 at 697
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 45/48 (93%)
 Strand = Plus / Plus

                                                                
Query: 240      ggtatctccttgcagggctgcgactccttcgccttctggaacaagacg 287
                |||||||||||||||||||| | |||||||||||||||||| ||||||
Sbjct: 14474267 ggtatctccttgcagggctgggtctccttcgccttctggaagaagacg 14474314



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                           
Query: 319      cctctgcgatgtactgctgcagttccttgtcggagctgaacat 361
                |||||||||||||||| |||| ||| ||||| |||||||||||
Sbjct: 14474428 cctctgcgatgtactggtgcaattctttgtcagagctgaacat 14474470
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>dbj|AP005200.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0673E01
          Length = 125909

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 45/48 (93%)
 Strand = Plus / Plus

                                                             
Query: 240   ggtatctccttgcagggctgcgactccttcgccttctggaacaagacg 287
             |||||||||||||||||||| | |||||||||||||||||| ||||||
Sbjct: 94598 ggtatctccttgcagggctgggtctccttcgccttctggaagaagacg 94645



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                        
Query: 319   cctctgcgatgtactgctgcagttccttgtcggagctgaacat 361
             |||||||||||||||| |||| ||| ||||| |||||||||||
Sbjct: 94759 cctctgcgatgtactggtgcaattctttgtcagagctgaacat 94801
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>ref|XM_809423.1| Trypanosoma cruzi strain CL Brener hypothetical protein
            (Tc00.1047053507257.50) partial mRNA
          Length = 5997

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 332  ctgctgcagttccttgtcggagctg 356
            |||| ||||||||||||||||||||
Sbjct: 2409 ctgccgcagttccttgtcggagctg 2385



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 332  ctgctgcagttccttgtcggagctg 356
            |||| ||||||||||||||||||||
Sbjct: 1686 ctgccgcagttccttgtcggagctg 1662



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 332 ctgctgcagttccttgtcggagctg 356
           |||| ||||||||||||||||||||
Sbjct: 963 ctgccgcagttccttgtcggagctg 939
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>ref|XM_816110.1| Trypanosoma cruzi strain CL Brener hypothetical protein
           (Tc00.1047053510329.260) partial mRNA
          Length = 4551

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 332 ctgctgcagttccttgtcggagctg 356
           |||| ||||||||||||||||||||
Sbjct: 963 ctgccgcagttccttgtcggagctg 939
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>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome
          Length = 4940217

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 211     caagggtctggttgatgacgggcgc 235
               |||||||||||| ||||||||||||
Sbjct: 4808975 caagggtctggtcgatgacgggcgc 4808951
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>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome
          Length = 4941439

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 211     caagggtctggttgatgacgggcgc 235
               |||||||||||| ||||||||||||
Sbjct: 4813886 caagggtctggtcgatgacgggcgc 4813862
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>ref|NM_103942.2| Arabidopsis thaliana transcription factor AT1G50600 mRNA, complete
            cds
          Length = 2060

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 157  gttgaaagagaagagaggca 176
            ||||||||||||||||||||
Sbjct: 1579 gttgaaagagaagagaggca 1598
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>ref|NM_102265.2| Arabidopsis thaliana unknown protein AT1G24190 mRNA, complete cds
          Length = 4362

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 151  tccaaagttgaaagagaaga 170
            ||||||||||||||||||||
Sbjct: 2731 tccaaagttgaaagagaaga 2750
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>gb|AC099641.8| Mus musculus chromosome 1, clone RP24-342C13, complete sequence
          Length = 188523

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 154    aaagttgaaagagaagagag 173
              ||||||||||||||||||||
Sbjct: 181261 aaagttgaaagagaagagag 181242
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>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome
          Length = 6438405

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 337     gcagttccttgtcggagctg 356
               ||||||||||||||||||||
Sbjct: 4057907 gcagttccttgtcggagctg 4057926
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>ref|NM_016924.1| Mus musculus open reading frame 5 (ORF5), mRNA
          Length = 1982

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 160  gaaagagaagagaggcaaat 179
            ||||||||||||||||||||
Sbjct: 1841 gaaagagaagagaggcaaat 1822
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>gb|BT000883.1| Arabidopsis thaliana clone C105359 putative scarecrow protein
            (At1g50600) mRNA, complete cds
          Length = 1825

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 157  gttgaaagagaagagaggca 176
            ||||||||||||||||||||
Sbjct: 1579 gttgaaagagaagagaggca 1598
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>gb|AC144510.1| Pan troglodytes BAC clone RP43-18C13 from 7, complete sequence
          Length = 161048

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 155    aagttgaaagagaagagagg 174
              ||||||||||||||||||||
Sbjct: 139038 aagttgaaagagaagagagg 139057
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>emb|AL590727.5| Human DNA sequence from clone RP11-111D3 on chromosome 6 Contains a
              eukaryotic translation initiation factor 4E binding protein
              pseudogene and part of a novel gene, complete sequence
          Length = 127913

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 25     cttttgacatttcacagtat 44
              ||||||||||||||||||||
Sbjct: 108580 cttttgacatttcacagtat 108561
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>gb|AY034929.1| Arabidopsis thaliana putative scarecrow protein (At1g50600) mRNA,
            partial cds
          Length = 2043

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 157  gttgaaagagaagagaggca 176
            ||||||||||||||||||||
Sbjct: 1550 gttgaaagagaagagaggca 1569
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>gb|AF535436.1| HIV-1 isolate 88USMF880113sg from USA envelope glycoprotein (env)
           gene, partial cds
          Length = 602

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 87  aaccaaaatagtacagctga 106
           ||||||||||||||||||||
Sbjct: 49  aaccaaaatagtacagctga 68
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>gb|AC182752.1| Gasterosteus aculeatus clone VMRC26-161K14, complete sequence
          Length = 162574

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 52    agcactttggaaacagtggg 71
             ||||||||||||||||||||
Sbjct: 36157 agcactttggaaacagtggg 36176
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>gb|BC002143.1| Mus musculus open reading frame 5, mRNA (cDNA clone MGC:7257
            IMAGE:3484719), complete cds
          Length = 2022

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 160  gaaagagaagagaggcaaat 179
            ||||||||||||||||||||
Sbjct: 1866 gaaagagaagagaggcaaat 1847
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>gb|AC140319.3| Mus musculus BAC clone RP23-413L6 from chromosome 16, complete
            sequence
          Length = 188184

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 160  gaaagagaagagaggcaaat 179
            ||||||||||||||||||||
Sbjct: 7998 gaaagagaagagaggcaaat 7979
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>dbj|AK084966.1| Mus musculus 13 days embryo lung cDNA, RIKEN full-length enriched
            library, clone:D430019P13 product:ORF5 PROTEIN, full
            insert sequence
          Length = 2079

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 160  gaaagagaagagaggcaaat 179
            ||||||||||||||||||||
Sbjct: 1860 gaaagagaagagaggcaaat 1841
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>dbj|AK002746.1| Mus musculus adult male kidney cDNA, RIKEN full-length enriched
            library, clone:0610033M02 product:open reading frame 5,
            full insert sequence
          Length = 1988

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 160  gaaagagaagagaggcaaat 179
            ||||||||||||||||||||
Sbjct: 1851 gaaagagaagagaggcaaat 1832
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>gb|AY039611.1| Arabidopsis thaliana F17J6.12/F17J6.12 mRNA, complete cds
          Length = 1879

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 157  gttgaaagagaagagaggca 176
            ||||||||||||||||||||
Sbjct: 1507 gttgaaagagaagagaggca 1526
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>gb|AC163028.5| Mus musculus chromosome 1, clone RP23-393I22, complete sequence
          Length = 206399

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 154   aaagttgaaagagaagagag 173
             ||||||||||||||||||||
Sbjct: 87731 aaagttgaaagagaagagag 87750
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>gb|AC135782.4| Homo sapiens chromosome 16 clone CTD-2555A7, complete sequence
          Length = 163550

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 127   tccacctcttcatgggaaattcag 150
             |||||||||||||||||| |||||
Sbjct: 47235 tccacctcttcatgggaatttcag 47258
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>gb|AC079279.4|AC079279 Arabidopsis thaliana chromosome 1 BAC F17J6 genomic sequence, complete
             sequence
          Length = 92745

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 157   gttgaaagagaagagaggca 176
             ||||||||||||||||||||
Sbjct: 38355 gttgaaagagaagagaggca 38336
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 253     agggctgcgactccttcgcc 272
               ||||||||||||||||||||
Sbjct: 7646676 agggctgcgactccttcgcc 7646695
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>gb|AC012561.2|AC012561 Arabidopsis thaliana chromosome I BAC F11F12 genomic sequence, complete
             sequence
          Length = 105733

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 157   gttgaaagagaagagaggca 176
             ||||||||||||||||||||
Sbjct: 39414 gttgaaagagaagagaggca 39433
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>gb|AF036302.1|AF036302 Arabidopsis thaliana scarecrow-like 5 (SCL5) mRNA, partial cds
          Length = 1065

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 157 gttgaaagagaagagaggca 176
           ||||||||||||||||||||
Sbjct: 706 gttgaaagagaagagaggca 725
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>gb|AF177771.1|AF177771 Mus musculus orf5 protein mRNA, complete cds
          Length = 1982

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 160  gaaagagaagagaggcaaat 179
            ||||||||||||||||||||
Sbjct: 1841 gaaagagaagagaggcaaat 1822
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>gb|AC154631.2| Mus musculus BAC clone RP23-264F8 from 16, complete sequence
          Length = 201820

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 160    gaaagagaagagaggcaaat 179
              ||||||||||||||||||||
Sbjct: 143161 gaaagagaagagaggcaaat 143142
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>gb|AC003975.1|AC003975 Human Cosmid g5129s420 from 7q31.3, complete sequence
          Length = 41025

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 155   aagttgaaagagaagagagg 174
             ||||||||||||||||||||
Sbjct: 22250 aagttgaaagagaagagagg 22269
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>dbj|AP006096.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT10G09, TM0173b,
             complete sequence
          Length = 66866

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 124   taatccacctcttcatgggaaatt 147
             |||||||||||||||| |||||||
Sbjct: 36400 taatccacctcttcattggaaatt 36377
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>gb|AC002396.1| Arabidopsis thaliana chromosome I BAC F3I6 genomic sequence, complete
             sequence
          Length = 122358

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 151   tccaaagttgaaagagaaga 170
             ||||||||||||||||||||
Sbjct: 45067 tccaaagttgaaagagaaga 45048


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,801,514
Number of Sequences: 3902068
Number of extensions: 4801514
Number of successful extensions: 97982
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 97839
Number of HSP's gapped (non-prelim): 143
length of query: 453
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 431
effective length of database: 17,147,199,772
effective search space: 7390443101732
effective search space used: 7390443101732
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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