ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart46g11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1MATK_TRITL (Q8MCL9) Maturase K (Intron maturase) 33 0.17
2MATK_TRIMI (Q8MCM7) Maturase K (Intron maturase) 32 0.29
3MATK_TRIWO (Q8MCL7) Maturase K (Intron maturase) 31 0.65
4MATK_TRIGC (Q8MCN2) Maturase K (Intron maturase) 31 0.65
5MATK_TRIBE (Q5YJV6) Maturase K (Intron maturase) 31 0.65
6MATK_TRIAO (Q8MCN9) Maturase K (Intron maturase) 31 0.65
7MATK_TRIRP (Q8MCM4) Maturase K (Intron maturase) 30 1.1
8MATK_TRIFG (Q8MCK8) Maturase K (Intron maturase) 30 1.1
9MATK_MELAB (Q8MCP5) Maturase K (Intron maturase) 30 1.1
10SYR_THEAC (Q9HLE7) Arginyl-tRNA synthetase (EC 6.1.1.19) (Argini... 29 2.5
11MATK_TRISO (Q8MCM2) Maturase K (Intron maturase) 28 4.2
12GLCNE_HUMAN (Q9Y223) Bifunctional UDP-N-acetylglucosamine 2-epim... 28 4.2
13Y199_MYCGE (P47441) Hypothetical protein MG199 28 5.5
14MATK_TRISM (Q8MCM3) Maturase K (Intron maturase) 28 5.5
15DNAE2_IDILO (Q5QUT9) Error-prone DNA polymerase (EC 2.7.7.7) 28 5.5
16MATK_DALWR (Q6TND0) Maturase K (Intron maturase) 28 7.2
17SAHH_SULTO (Q975T0) Adenosylhomocysteinase (EC 3.3.1.1) (S-adeno... 28 7.2
18MATK_DALPU (Q6TND4) Maturase K (Intron maturase) 28 7.2
19SPEH_PYRHO (O57711) S-adenosylmethionine decarboxylase proenzyme... 28 7.2
20SPEH_PYRAB (Q9UXT3) S-adenosylmethionine decarboxylase proenzyme... 28 7.2 
>MATK_TRITL (Q8MCL9) Maturase K (Intron maturase)|
          Length = 506

 Score = 33.1 bits (74), Expect = 0.17
 Identities = 20/69 (28%), Positives = 34/69 (49%)
 Frame = -1

Query: 248 LIMVLMYHS*YCNN*FFSFVPKSHTIYNFDSRNFKSHYVLLDYFDCSISRLFLLQNNFSQ 69
           L+ + +YH  +CN  +  F+P   +I  F  RN +    L +++ C    +FL   N S 
Sbjct: 176 LLRLFLYH--FCN--WNCFIPTKKSISTFSKRNPRLFLFLHNFYVCEYESIFLFLRNKSS 231

Query: 68  PMLLATPSV 42
            + L + SV
Sbjct: 232 HLRLKSFSV 240
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>MATK_TRIMI (Q8MCM7) Maturase K (Intron maturase)|
          Length = 506

 Score = 32.3 bits (72), Expect = 0.29
 Identities = 20/69 (28%), Positives = 33/69 (47%)
 Frame = -1

Query: 248 LIMVLMYHS*YCNN*FFSFVPKSHTIYNFDSRNFKSHYVLLDYFDCSISRLFLLQNNFSQ 69
           L+ V +YH  +CN  +  F+P   +I  F   N +    L +++ C    +FL   N S 
Sbjct: 176 LLRVFLYH--FCN--WNCFIPTKKSISTFSKSNPRLFLFLYNFYVCEYESIFLFLRNKSY 231

Query: 68  PMLLATPSV 42
            + L + SV
Sbjct: 232 HLRLKSFSV 240
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>MATK_TRIWO (Q8MCL7) Maturase K (Intron maturase)|
          Length = 506

 Score = 31.2 bits (69), Expect = 0.65
 Identities = 19/69 (27%), Positives = 33/69 (47%)
 Frame = -1

Query: 248 LIMVLMYHS*YCNN*FFSFVPKSHTIYNFDSRNFKSHYVLLDYFDCSISRLFLLQNNFSQ 69
           L+ + +YH  +CN  +  F+P   +I  F   N +    L +++ C    +FL   N S 
Sbjct: 176 LLRLFLYH--FCN--WNCFIPTKKSISTFSKSNPRLFLFLYNFYVCEYESIFLFLRNKSY 231

Query: 68  PMLLATPSV 42
            + L + SV
Sbjct: 232 HLRLKSFSV 240
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>MATK_TRIGC (Q8MCN2) Maturase K (Intron maturase)|
          Length = 506

 Score = 31.2 bits (69), Expect = 0.65
 Identities = 19/69 (27%), Positives = 33/69 (47%)
 Frame = -1

Query: 248 LIMVLMYHS*YCNN*FFSFVPKSHTIYNFDSRNFKSHYVLLDYFDCSISRLFLLQNNFSQ 69
           L+ + +YH  +CN  +  F+P   +I  F   N +    L +++ C    +FL   N S 
Sbjct: 176 LLRLFLYH--FCN--WNCFIPTKKSISTFSKSNPRLFLFLYNFYVCEYESIFLFLRNKSY 231

Query: 68  PMLLATPSV 42
            + L + SV
Sbjct: 232 HLRLKSFSV 240
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>MATK_TRIBE (Q5YJV6) Maturase K (Intron maturase)|
          Length = 506

 Score = 31.2 bits (69), Expect = 0.65
 Identities = 19/69 (27%), Positives = 33/69 (47%)
 Frame = -1

Query: 248 LIMVLMYHS*YCNN*FFSFVPKSHTIYNFDSRNFKSHYVLLDYFDCSISRLFLLQNNFSQ 69
           L+ + +YH  +CN  +  F+P   +I  F   N +    L +++ C    +FL   N S 
Sbjct: 176 LLRLFLYH--FCN--WNCFIPTKKSISTFSKSNPRLFLFLYNFYVCEYESIFLFLRNKSY 231

Query: 68  PMLLATPSV 42
            + L + SV
Sbjct: 232 HLRLKSFSV 240
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>MATK_TRIAO (Q8MCN9) Maturase K (Intron maturase)|
          Length = 506

 Score = 31.2 bits (69), Expect = 0.65
 Identities = 19/69 (27%), Positives = 33/69 (47%)
 Frame = -1

Query: 248 LIMVLMYHS*YCNN*FFSFVPKSHTIYNFDSRNFKSHYVLLDYFDCSISRLFLLQNNFSQ 69
           L+ + +YH  +CN  +  F+P   +I  F   N +    L +++ C    +FL   N S 
Sbjct: 176 LLRLFLYH--FCN--WNCFIPTKKSISTFSKSNPRLFLFLYNFYVCEYESIFLFLRNKSY 231

Query: 68  PMLLATPSV 42
            + L + SV
Sbjct: 232 HLRLKSFSV 240
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>MATK_TRIRP (Q8MCM4) Maturase K (Intron maturase)|
          Length = 506

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 18/67 (26%), Positives = 33/67 (49%)
 Frame = -1

Query: 242 MVLMYHS*YCNN*FFSFVPKSHTIYNFDSRNFKSHYVLLDYFDCSISRLFLLQNNFSQPM 63
           ++ ++ S +CN  +  F+P   +I  F  RN +    L +++ C    +FL   N S  +
Sbjct: 176 LLRLFLSHFCN--WNCFIPTKKSISTFSKRNPRLFLFLHNFYVCEYESIFLFLRNKSSHL 233

Query: 62  LLATPSV 42
            L + SV
Sbjct: 234 RLKSFSV 240
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>MATK_TRIFG (Q8MCK8) Maturase K (Intron maturase)|
          Length = 506

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 19/69 (27%), Positives = 34/69 (49%)
 Frame = -1

Query: 248 LIMVLMYHS*YCNN*FFSFVPKSHTIYNFDSRNFKSHYVLLDYFDCSISRLFLLQNNFSQ 69
           L+ + +Y+  +CN  + SF+    +I  F  RN +    L +++ C    +FL   N S 
Sbjct: 176 LLRLFLYN--FCN--WNSFITTKESISTFSKRNPRFFLFLYNFYVCEYESIFLFLRNKSS 231

Query: 68  PMLLATPSV 42
            + L + SV
Sbjct: 232 HLRLKSFSV 240
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>MATK_MELAB (Q8MCP5) Maturase K (Intron maturase)|
          Length = 506

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 19/69 (27%), Positives = 33/69 (47%)
 Frame = -1

Query: 248 LIMVLMYHS*YCNN*FFSFVPKSHTIYNFDSRNFKSHYVLLDYFDCSISRLFLLQNNFSQ 69
           L+ + +YH  +CN  + SF+    +I  F   N +    L +++ C    +FL   N S 
Sbjct: 176 LLRLFLYH--FCN--WNSFITTKKSISTFSKSNPRLFLFLYNFYVCEYESIFLFLRNKSS 231

Query: 68  PMLLATPSV 42
            + L + SV
Sbjct: 232 HLRLKSFSV 240
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>SYR_THEAC (Q9HLE7) Arginyl-tRNA synthetase (EC 6.1.1.19) (Arginine--tRNA|
           ligase) (ArgRS)
          Length = 546

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 11/27 (40%), Positives = 21/27 (77%)
 Frame = -2

Query: 295 LHHLIAELLKTDGRIA*LWFSCITLNT 215
           L+H++ E+LK + R++ +++S ITL T
Sbjct: 325 LNHVLKEMLKLENRVSFMYYSFITLET 351
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>MATK_TRISO (Q8MCM2) Maturase K (Intron maturase)|
          Length = 506

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 18/69 (26%), Positives = 32/69 (46%)
 Frame = -1

Query: 248 LIMVLMYHS*YCNN*FFSFVPKSHTIYNFDSRNFKSHYVLLDYFDCSISRLFLLQNNFSQ 69
           L+ + +Y   +CN  +  F+P   +I  F   N +    L +++ C    +FL   N S 
Sbjct: 176 LLRLFLYD--FCN--WNCFIPSKKSISTFSKSNPRLFLFLYNFYVCEYESIFLFLRNKSS 231

Query: 68  PMLLATPSV 42
            + L + SV
Sbjct: 232 HLRLKSFSV 240
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>GLCNE_HUMAN (Q9Y223) Bifunctional UDP-N-acetylglucosamine|
           2-epimerase/N-acetylmannosamine kinase
           (UDP-GlcNAc-2-epimerase/ManAc kinase) [Includes:
           UDP-N-acetylglucosamine 2-epimerase (EC 5.1.3.14)
           (Uridine diphosphate-N-acetylglucosamine-2-epimerase)
           (UDP
          Length = 722

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 15/43 (34%), Positives = 24/43 (55%)
 Frame = +2

Query: 83  SVKGRVVKCCSRSNLKVHNET*NCVNQNCR*CETSVQMRKINC 211
           S+KG +VK  ++ N K + E  N + Q C   E + +  K+NC
Sbjct: 425 SMKGEIVKKYTQFNPKTYEERINLILQMC--VEAAAEAVKLNC 465
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>Y199_MYCGE (P47441) Hypothetical protein MG199|
          Length = 167

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 12/28 (42%), Positives = 19/28 (67%)
 Frame = +2

Query: 257 SICLEQFSNQMMKMNYINKGLGQTDNKV 340
           +I ++QF+NQ + +NY+NK    TD  V
Sbjct: 50  TISIDQFANQELFVNYLNKLTNFTDKTV 77
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>MATK_TRISM (Q8MCM3) Maturase K (Intron maturase)|
          Length = 509

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 18/69 (26%), Positives = 32/69 (46%)
 Frame = -1

Query: 248 LIMVLMYHS*YCNN*FFSFVPKSHTIYNFDSRNFKSHYVLLDYFDCSISRLFLLQNNFSQ 69
           L+ + +Y   +CN  +  F+P   +I  F   N +    L +++ C    +FL   N S 
Sbjct: 175 LLRLFLYD--FCN--WNCFIPTKKSISTFSKSNPRLFLFLYNFYVCEYESIFLFLRNKSS 230

Query: 68  PMLLATPSV 42
            + L + SV
Sbjct: 231 HLRLKSFSV 239
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>DNAE2_IDILO (Q5QUT9) Error-prone DNA polymerase (EC 2.7.7.7)|
          Length = 1039

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 18/39 (46%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
 Frame = -1

Query: 164 FDSRNFKSHYV--LLDYFDCSISRLFLLQNNFSQPMLLA 54
           F SR+ K HY   + D+FD     L L Q +FSQ  LLA
Sbjct: 108 FRSRSEKGHYQANIDDFFDGFSQCLLLWQPDFSQAQLLA 146
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>MATK_DALWR (Q6TND0) Maturase K (Intron maturase)|
          Length = 512

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 16/59 (27%), Positives = 28/59 (47%)
 Frame = -1

Query: 218 YCNN*FFSFVPKSHTIYNFDSRNFKSHYVLLDYFDCSISRLFLLQNNFSQPMLLATPSV 42
           YCN  + SF+    +I +F   N +  + L +++ C    +FL     S  + L + SV
Sbjct: 188 YCN--WNSFINPKKSISSFSKSNPRFFFFLYNFYVCEYESIFLFLRKKSSHLRLTSFSV 244
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>SAHH_SULTO (Q975T0) Adenosylhomocysteinase (EC 3.3.1.1)|
           (S-adenosyl-L-homocysteine hydrolase) (AdoHcyase)
          Length = 415

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 13/32 (40%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
 Frame = +2

Query: 248 GNPSICLE-QFSNQMMKMNYINKGLGQTDNKV 340
           G+PS  ++  FSNQ + + YI +  G+ +NKV
Sbjct: 343 GHPSEVMDLSFSNQALSVKYIYENRGKLENKV 374
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>MATK_DALPU (Q6TND4) Maturase K (Intron maturase)|
          Length = 509

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 16/59 (27%), Positives = 28/59 (47%)
 Frame = -1

Query: 218 YCNN*FFSFVPKSHTIYNFDSRNFKSHYVLLDYFDCSISRLFLLQNNFSQPMLLATPSV 42
           YCN  + SF+    +I +F   N +  + L +++ C    +FL     S  + L + SV
Sbjct: 185 YCN--WNSFINPKKSISSFSKSNPRFFFFLYNFYVCEYESIFLFLRKKSSHLRLTSFSV 241
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>SPEH_PYRHO (O57711) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50)|
           (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine
           decarboxylase beta chain; S-adenosylmethionine
           decarboxylase alpha chain]
          Length = 144

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = +2

Query: 266 LEQFSNQMMKMNYINKGLGQTDNKVPTSVLTWQ 364
           LEQF  Q   ++ I +G+ + D     ++LTW+
Sbjct: 102 LEQFKAQYAHVSEIKRGIEEEDRTFTHTILTWE 134
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>SPEH_PYRAB (Q9UXT3) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50)|
           (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine
           decarboxylase beta chain; S-adenosylmethionine
           decarboxylase alpha chain]
          Length = 139

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = +2

Query: 266 LEQFSNQMMKMNYINKGLGQTDNKVPTSVLTWQ 364
           LEQF  Q   ++ I +G+ + D     ++LTW+
Sbjct: 97  LEQFKAQYAHVSEIKRGIEEDDETFTHTILTWE 129


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 43,965,140
Number of Sequences: 219361
Number of extensions: 718465
Number of successful extensions: 1474
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1466
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1474
length of database: 80,573,946
effective HSP length: 97
effective length of database: 59,295,929
effective search space used: 1423102296
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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