Clone Name | rbart46g03 |
---|---|
Clone Library Name | barley_pub |
>gb|U93560.1|ZMU93560 Zea mays glutamate dehydrogenase mutant (GDH1) mRNA, complete cds Length = 1236 Score = 194 bits (98), Expect = 2e-46 Identities = 164/186 (88%) Strand = Plus / Minus Query: 257 gaggacggtggcgcgggcgacgcggttgacgccgagggtgaaggcgcccatgcggaggtc 316 ||||||||||||||| ||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 1218 gaggacggtggcgcgcgcgacgcggttgacgcccagcgtgaaggcgcccatgcggaggtc 1159 Query: 317 gcagtggtgggagcggcacatctccttggtgtcccggaaggcgcgggtcatgtacgtctt 376 |||| |||| |||||||||| ||| ||| | ||||||||| ||||||||||||| Sbjct: 1158 gcagctgtggctccggcacatctgcttcacgtctccgaaggcgcgcgtcatgtacgtctg 1099 Query: 377 gagctcccggttcaccttctcctcgtcccacatgaacccctggatgttctgcacccactc 436 |||||| ||| ||||||||||||||||||||||||||||||||||| || |||||||| Sbjct: 1098 cagctccgcgtttaccttctcctcgtcccacatgaacccctggatgttttgtacccactc 1039 Query: 437 gaagta 442 |||||| Sbjct: 1038 gaagta 1033
>gb|AY106054.1| Zea mays PCO074386 mRNA sequence Length = 1642 Score = 186 bits (94), Expect = 4e-44 Identities = 163/186 (87%) Strand = Plus / Minus Query: 257 gaggacggtggcgcgggcgacgcggttgacgccgagggtgaaggcgcccatgcggaggtc 316 ||||||||||||||| ||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 1353 gaggacggtggcgcgcgcgacgcggttgacgccaagcgtgaaggcgcccatgcggaggtc 1294 Query: 317 gcagtggtgggagcggcacatctccttggtgtcccggaaggcgcgggtcatgtacgtctt 376 |||| |||| |||||||||| ||| ||||| ||||||||| |||||||||||| Sbjct: 1293 gcagctgtggctccggcacatctgcttcacgtccccgaaggcgcgcgtcatgtacgtccg 1234 Query: 377 gagctcccggttcaccttctcctcgtcccacatgaacccctggatgttctgcacccactc 436 |||||| ||| |||||||| |||||||||||||||||||||||||| || |||||||| Sbjct: 1233 cagctccgcgtttaccttctcttcgtcccacatgaacccctggatgttttgtacccactc 1174 Query: 437 gaagta 442 |||||| Sbjct: 1173 gaagta 1168
>gb|U93561.1|ZMU93561 Zea mays glutamate dehydrogenase (GDH1) mRNA, complete cds Length = 1236 Score = 186 bits (94), Expect = 4e-44 Identities = 163/186 (87%) Strand = Plus / Minus Query: 257 gaggacggtggcgcgggcgacgcggttgacgccgagggtgaaggcgcccatgcggaggtc 316 ||||||||||||||| ||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 1218 gaggacggtggcgcgcgcgacgcggttgacgcccagcgtgaaggcgcccatgcggaggtc 1159 Query: 317 gcagtggtgggagcggcacatctccttggtgtcccggaaggcgcgggtcatgtacgtctt 376 |||| |||| |||||||||| ||| ||| | ||||||||| |||||||||||| Sbjct: 1158 gcagctgtggctccggcacatctgcttcacgtctccgaaggcgcgcgtcatgtacgtccg 1099 Query: 377 gagctcccggttcaccttctcctcgtcccacatgaacccctggatgttctgcacccactc 436 |||||| ||| ||||||||||||||||||||||||||||||||||| || |||||||| Sbjct: 1098 cagctccgcgtttaccttctcctcgtcccacatgaacccctggatgttttgtacccactc 1039 Query: 437 gaagta 442 |||||| Sbjct: 1038 gaagta 1033
>ref|XM_469970.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1615 Score = 178 bits (90), Expect = 1e-41 Identities = 159/182 (87%) Strand = Plus / Minus Query: 261 acggtggcgcgggcgacgcggttgacgccgagggtgaaggcgcccatgcggaggtcgcag 320 ||||||||||| ||||| |||||||| ||||||||||||||||||||||||||||||||| Sbjct: 1284 acggtggcgcgagcgacacggttgacaccgagggtgaaggcgcccatgcggaggtcgcag 1225 Query: 321 tggtgggagcggcacatctccttggtgtcccggaaggcgcgggtcatgtacgtcttgagc 380 |||||| | |||||||||||| |||| ||| | ||||||||||| ||||| ||| Sbjct: 1224 tggtggctcctgcacatctccttcacatccctgaacccacgggtcatgtaggtcttcagc 1165 Query: 381 tcccggttcaccttctcctcgtcccacatgaacccctggatgttctgcacccactcgaag 440 || ||||||||||||||||||||||||||| ||||| |||||||| |||||||||||| Sbjct: 1164 tcattgttcaccttctcctcgtcccacatgaaaccctgaatgttctgaacccactcgaag 1105 Query: 441 ta 442 || Sbjct: 1104 ta 1103
>ref|XM_507557.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBb0060J21.2 mRNA Length = 1684 Score = 178 bits (90), Expect = 1e-41 Identities = 159/182 (87%) Strand = Plus / Minus Query: 261 acggtggcgcgggcgacgcggttgacgccgagggtgaaggcgcccatgcggaggtcgcag 320 ||||||||||| ||||| |||||||| ||||||||||||||||||||||||||||||||| Sbjct: 1353 acggtggcgcgagcgacacggttgacaccgagggtgaaggcgcccatgcggaggtcgcag 1294 Query: 321 tggtgggagcggcacatctccttggtgtcccggaaggcgcgggtcatgtacgtcttgagc 380 |||||| | |||||||||||| |||| ||| | ||||||||||| ||||| ||| Sbjct: 1293 tggtggctcctgcacatctccttcacatccctgaacccacgggtcatgtaggtcttcagc 1234 Query: 381 tcccggttcaccttctcctcgtcccacatgaacccctggatgttctgcacccactcgaag 440 || ||||||||||||||||||||||||||| ||||| |||||||| |||||||||||| Sbjct: 1233 tcattgttcaccttctcctcgtcccacatgaaaccctgaatgttctgaacccactcgaag 1174 Query: 441 ta 442 || Sbjct: 1173 ta 1172
>ref|XM_507076.2| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBb0060J21.2 mRNA Length = 1617 Score = 178 bits (90), Expect = 1e-41 Identities = 159/182 (87%) Strand = Plus / Minus Query: 261 acggtggcgcgggcgacgcggttgacgccgagggtgaaggcgcccatgcggaggtcgcag 320 ||||||||||| ||||| |||||||| ||||||||||||||||||||||||||||||||| Sbjct: 1286 acggtggcgcgagcgacacggttgacaccgagggtgaaggcgcccatgcggaggtcgcag 1227 Query: 321 tggtgggagcggcacatctccttggtgtcccggaaggcgcgggtcatgtacgtcttgagc 380 |||||| | |||||||||||| |||| ||| | ||||||||||| ||||| ||| Sbjct: 1226 tggtggctcctgcacatctccttcacatccctgaacccacgggtcatgtaggtcttcagc 1167 Query: 381 tcccggttcaccttctcctcgtcccacatgaacccctggatgttctgcacccactcgaag 440 || ||||||||||||||||||||||||||| ||||| |||||||| |||||||||||| Sbjct: 1166 tcattgttcaccttctcctcgtcccacatgaaaccctgaatgttctgaacccactcgaag 1107 Query: 441 ta 442 || Sbjct: 1106 ta 1105
>gb|AY332470.1| Oryza sativa (japonica cultivar-group) glutamate dehydrogenase (GDH) mRNA, complete cds Length = 1416 Score = 178 bits (90), Expect = 1e-41 Identities = 159/182 (87%) Strand = Plus / Minus Query: 261 acggtggcgcgggcgacgcggttgacgccgagggtgaaggcgcccatgcggaggtcgcag 320 ||||||||||| ||||| |||||||| ||||||||||||||||||||||||||||||||| Sbjct: 1284 acggtggcgcgagcgacacggttgacaccgagggtgaaggcgcccatgcggaggtcgcag 1225 Query: 321 tggtgggagcggcacatctccttggtgtcccggaaggcgcgggtcatgtacgtcttgagc 380 |||||| | |||||||||||| |||| ||| | ||||||||||| ||||| ||| Sbjct: 1224 tggtggctcctgcacatctccttcacatccctgaacccacgggtcatgtaggtcttcagc 1165 Query: 381 tcccggttcaccttctcctcgtcccacatgaacccctggatgttctgcacccactcgaag 440 || ||||||||||||||||||||||||||| ||||| |||||||| |||||||||||| Sbjct: 1164 tcattgttcaccttctcctcgtcccacatgaaaccctgaatgttctgaacccactcgaag 1105 Query: 441 ta 442 || Sbjct: 1104 ta 1103
>dbj|AB024962.1| Oryza sativa (japonica cultivar-group) GDH1 mRNA for glutamate dehydrogenase 1, complete cds Length = 1550 Score = 178 bits (90), Expect = 1e-41 Identities = 159/182 (87%) Strand = Plus / Minus Query: 261 acggtggcgcgggcgacgcggttgacgccgagggtgaaggcgcccatgcggaggtcgcag 320 ||||||||||| ||||| |||||||| ||||||||||||||||||||||||||||||||| Sbjct: 1227 acggtggcgcgagcgacacggttgacaccgagggtgaaggcgcccatgcggaggtcgcag 1168 Query: 321 tggtgggagcggcacatctccttggtgtcccggaaggcgcgggtcatgtacgtcttgagc 380 |||||| | |||||||||||| |||| ||| | ||||||||||| ||||| ||| Sbjct: 1167 tggtggctcctgcacatctccttcacatccctgaacccacgggtcatgtaggtcttcagc 1108 Query: 381 tcccggttcaccttctcctcgtcccacatgaacccctggatgttctgcacccactcgaag 440 || ||||||||||||||||||||||||||| ||||| |||||||| |||||||||||| Sbjct: 1107 tcattgttcaccttctcctcgtcccacatgaaaccctgaatgttctgaacccactcgaag 1048 Query: 441 ta 442 || Sbjct: 1047 ta 1046
>dbj|AK071839.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023121E06, full insert sequence Length = 1682 Score = 178 bits (90), Expect = 1e-41 Identities = 159/182 (87%) Strand = Plus / Minus Query: 261 acggtggcgcgggcgacgcggttgacgccgagggtgaaggcgcccatgcggaggtcgcag 320 ||||||||||| ||||| |||||||| ||||||||||||||||||||||||||||||||| Sbjct: 1354 acggtggcgcgagcgacacggttgacaccgagggtgaaggcgcccatgcggaggtcgcag 1295 Query: 321 tggtgggagcggcacatctccttggtgtcccggaaggcgcgggtcatgtacgtcttgagc 380 |||||| | |||||||||||| |||| ||| | ||||||||||| ||||| ||| Sbjct: 1294 tggtggctcctgcacatctccttcacatccctgaacccacgggtcatgtaggtcttcagc 1235 Query: 381 tcccggttcaccttctcctcgtcccacatgaacccctggatgttctgcacccactcgaag 440 || ||||||||||||||||||||||||||| ||||| |||||||| |||||||||||| Sbjct: 1234 tcattgttcaccttctcctcgtcccacatgaaaccctgaatgttctgaacccactcgaag 1175 Query: 441 ta 442 || Sbjct: 1174 ta 1173
>dbj|D49475.1|MZEGD Corn mRNA for glutamate dehydrogenase, complete cds Length = 1621 Score = 163 bits (82), Expect = 6e-37 Identities = 160/186 (86%) Strand = Plus / Minus Query: 257 gaggacggtggcgcgggcgacgcggttgacgccgagggtgaaggcgcccatgcggaggtc 316 ||||||||||||||| ||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 1338 gaggacggtggcgcgcgcgacgcggttgacgcccagcgtgaaggcgcccatgcggaggtc 1279 Query: 317 gcagtggtgggagcggcacatctccttggtgtcccggaaggcgcgggtcatgtacgtctt 376 |||| |||| |||||||||| ||| || | |||||||| || ||||||||| Sbjct: 1278 gcagctgtggctccggcacatctgcttcacgtttccaaaggcgcgcgtgatgtacgtccg 1219 Query: 377 gagctcccggttcaccttctcctcgtcccacatgaacccctggatgttctgcacccactc 436 |||||| ||| ||||||||||||||||||||||||||||||||||| || |||||||| Sbjct: 1218 cagctccgcgtttaccttctcctcgtcccacatgaacccctggatgttttgtacccactc 1159 Query: 437 gaagta 442 |||||| Sbjct: 1158 gaagta 1153
>gb|AC090871.11| Oryza sativa chromosome 3 BAC OSJNBb0060J21 genomic sequence, complete sequence Length = 162497 Score = 157 bits (79), Expect = 4e-35 Identities = 145/167 (86%) Strand = Plus / Minus Query: 261 acggtggcgcgggcgacgcggttgacgccgagggtgaaggcgcccatgcggaggtcgcag 320 ||||||||||| ||||| |||||||| ||||||||||||||||||||||||||||||||| Sbjct: 9445 acggtggcgcgagcgacacggttgacaccgagggtgaaggcgcccatgcggaggtcgcag 9386 Query: 321 tggtgggagcggcacatctccttggtgtcccggaaggcgcgggtcatgtacgtcttgagc 380 |||||| | |||||||||||| |||| ||| | ||||||||||| ||||| ||| Sbjct: 9385 tggtggctcctgcacatctccttcacatccctgaacccacgggtcatgtaggtcttcagc 9326 Query: 381 tcccggttcaccttctcctcgtcccacatgaacccctggatgttctg 427 || ||||||||||||||||||||||||||| ||||| |||||||| Sbjct: 9325 tcattgttcaccttctcctcgtcccacatgaaaccctgaatgttctg 9279
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 157 bits (79), Expect = 4e-35 Identities = 145/167 (86%) Strand = Plus / Plus Query: 261 acggtggcgcgggcgacgcggttgacgccgagggtgaaggcgcccatgcggaggtcgcag 320 ||||||||||| ||||| |||||||| ||||||||||||||||||||||||||||||||| Sbjct: 32734462 acggtggcgcgagcgacacggttgacaccgagggtgaaggcgcccatgcggaggtcgcag 32734521 Query: 321 tggtgggagcggcacatctccttggtgtcccggaaggcgcgggtcatgtacgtcttgagc 380 |||||| | |||||||||||| |||| ||| | ||||||||||| ||||| ||| Sbjct: 32734522 tggtggctcctgcacatctccttcacatccctgaacccacgggtcatgtaggtcttcagc 32734581 Query: 381 tcccggttcaccttctcctcgtcccacatgaacccctggatgttctg 427 || ||||||||||||||||||||||||||| ||||| |||||||| Sbjct: 32734582 tcattgttcaccttctcctcgtcccacatgaaaccctgaatgttctg 32734628 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 149 ttattcaacttttttgttga 168 |||||||||||||||||||| Sbjct: 22782117 ttattcaacttttttgttga 22782098
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 157 bits (79), Expect = 4e-35 Identities = 145/167 (86%) Strand = Plus / Plus Query: 261 acggtggcgcgggcgacgcggttgacgccgagggtgaaggcgcccatgcggaggtcgcag 320 ||||||||||| ||||| |||||||| ||||||||||||||||||||||||||||||||| Sbjct: 32824972 acggtggcgcgagcgacacggttgacaccgagggtgaaggcgcccatgcggaggtcgcag 32825031 Query: 321 tggtgggagcggcacatctccttggtgtcccggaaggcgcgggtcatgtacgtcttgagc 380 |||||| | |||||||||||| |||| ||| | ||||||||||| ||||| ||| Sbjct: 32825032 tggtggctcctgcacatctccttcacatccctgaacccacgggtcatgtaggtcttcagc 32825091 Query: 381 tcccggttcaccttctcctcgtcccacatgaacccctggatgttctg 427 || ||||||||||||||||||||||||||| ||||| |||||||| Sbjct: 32825092 tcattgttcaccttctcctcgtcccacatgaaaccctgaatgttctg 32825138 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 149 ttattcaacttttttgttga 168 |||||||||||||||||||| Sbjct: 22775145 ttattcaacttttttgttga 22775126
>ref|NM_193999.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 339 Score = 117 bits (59), Expect = 3e-23 Identities = 101/115 (87%) Strand = Plus / Minus Query: 261 acggtggcgcgggcgacgcggttgacgccgagggtgaaggcgcccatgcggaggtcgcag 320 |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| Sbjct: 317 acggtggcgcgggccacacggttgacgccgagggtgaaggcgcccatgcggaggtcgcag 258 Query: 321 tggtgggagcggcacatctccttggtgtcccggaaggcgcgggtcatgtacgtct 375 |||||| | |||||||||||| |||| ||| ||||||||||||| |||| Sbjct: 257 tggtggctcctgcacatctccttctcatccctgaacccgcgggtcatgtaggtct 203
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 117 bits (59), Expect = 3e-23 Identities = 101/115 (87%) Strand = Plus / Plus Query: 261 acggtggcgcgggcgacgcggttgacgccgagggtgaaggcgcccatgcggaggtcgcag 320 |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| Sbjct: 14528024 acggtggcgcgggccacacggttgacgccgagggtgaaggcgcccatgcggaggtcgcag 14528083 Query: 321 tggtgggagcggcacatctccttggtgtcccggaaggcgcgggtcatgtacgtct 375 |||||| | |||||||||||| |||| ||| ||||||||||||| |||| Sbjct: 14528084 tggtggctcctgcacatctccttctcatccctgaacccgcgggtcatgtaggtct 14528138
>dbj|AP003444.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1164G11 Length = 142699 Score = 117 bits (59), Expect = 3e-23 Identities = 101/115 (87%) Strand = Plus / Plus Query: 261 acggtggcgcgggcgacgcggttgacgccgagggtgaaggcgcccatgcggaggtcgcag 320 |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| Sbjct: 9401 acggtggcgcgggccacacggttgacgccgagggtgaaggcgcccatgcggaggtcgcag 9460 Query: 321 tggtgggagcggcacatctccttggtgtcccggaaggcgcgggtcatgtacgtct 375 |||||| | |||||||||||| |||| ||| ||||||||||||| |||| Sbjct: 9461 tggtggctcctgcacatctccttctcatccctgaacccgcgggtcatgtaggtct 9515
>dbj|AP003275.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0514H03 Length = 167230 Score = 117 bits (59), Expect = 3e-23 Identities = 101/115 (87%) Strand = Plus / Plus Query: 261 acggtggcgcgggcgacgcggttgacgccgagggtgaaggcgcccatgcggaggtcgcag 320 |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| Sbjct: 87337 acggtggcgcgggccacacggttgacgccgagggtgaaggcgcccatgcggaggtcgcag 87396 Query: 321 tggtgggagcggcacatctccttggtgtcccggaaggcgcgggtcatgtacgtct 375 |||||| | |||||||||||| |||| ||| ||||||||||||| |||| Sbjct: 87397 tggtggctcctgcacatctccttctcatccctgaacccgcgggtcatgtaggtct 87451
>ref|NM_111262.1| Arabidopsis thaliana oxidoreductase AT3G03910 mRNA, complete cds Length = 1479 Score = 81.8 bits (41), Expect = 2e-12 Identities = 74/85 (87%) Strand = Plus / Minus Query: 358 cgcgggtcatgtacgtcttgagctcccggttcaccttctcctcgtcccacatgaacccct 417 |||| |||||||| ||||| ||||||| |||||||| ||||| ||||||||||| || | Sbjct: 1188 cgcgagtcatgtaggtctttagctccctattcaccttttcctcatcccacatgaatcctt 1129 Query: 418 ggatgttctgcacccactcgaagta 442 | |||||||| |||||||||||||| Sbjct: 1128 gtatgttctgaacccactcgaagta 1104
>gb|AY681352.1| Lupinus luteus glutamate dehydrogenase 1 (GDH1) mRNA, complete cds Length = 1405 Score = 73.8 bits (37), Expect = 4e-10 Identities = 52/57 (91%) Strand = Plus / Minus Query: 386 gttcaccttctcctcgtcccacatgaacccctggatgttctgcacccactcgaagta 442 |||||||||||| || |||||||||||||| || ||||||||||||||||| ||||| Sbjct: 1132 gttcaccttctcttcatcccacatgaacccttgtatgttctgcacccactcaaagta 1076
>ref|XM_467072.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1424 Score = 73.8 bits (37), Expect = 4e-10 Identities = 64/73 (87%) Strand = Plus / Minus Query: 364 tcatgtacgtcttgagctcccggttcaccttctcctcgtcccacatgaacccctggatgt 423 |||||||| | | |||||||| |||||||||||| || ||||||||||| ||||| |||| Sbjct: 1227 tcatgtacttttggagctccctgttcaccttctcttcatcccacatgaagccctgaatgt 1168 Query: 424 tctgcacccactc 436 |||| |||||||| Sbjct: 1167 tctgaacccactc 1155
>ref|XM_473381.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1239 Score = 73.8 bits (37), Expect = 4e-10 Identities = 64/73 (87%) Strand = Plus / Minus Query: 364 tcatgtacgtcttgagctcccggttcaccttctcctcgtcccacatgaacccctggatgt 423 |||||||| | | ||||||| ||||||||||||||| |||||||||||||| || |||| Sbjct: 1114 tcatgtacttgtggagctccatgttcaccttctcctcatcccacatgaacccttgaatgt 1055 Query: 424 tctgcacccactc 436 |||| |||||||| Sbjct: 1054 tctgaacccactc 1042
>emb|AJ879895.1| Glycine max mRNA for glutamate dehydrogenase 1 (gdh1 gene) Length = 1635 Score = 73.8 bits (37), Expect = 4e-10 Identities = 70/81 (86%) Strand = Plus / Minus Query: 362 ggtcatgtacgtcttgagctcccggttcaccttctcctcgtcccacatgaacccctggat 421 ||||||||| ||||| ||||| |||||| |||||||| ||||||||||| || ||||| Sbjct: 1275 ggtcatgtaggtctttagctcattgttcactttctcctcatcccacatgaaaccttggat 1216 Query: 422 gttctgcacccactcgaagta 442 |||||| |||||||| ||||| Sbjct: 1215 gttctgaacccactcaaagta 1195
>dbj|AB189166.1| Oryza sativa (japonica cultivar-group) OsGDH2 mRNA for glutamate dehydrogenase 2, complete cds Length = 1835 Score = 73.8 bits (37), Expect = 4e-10 Identities = 64/73 (87%) Strand = Plus / Minus Query: 364 tcatgtacgtcttgagctcccggttcaccttctcctcgtcccacatgaacccctggatgt 423 |||||||| | | ||||||| ||||||||||||||| |||||||||||||| || |||| Sbjct: 1358 tcatgtacttgtggagctccatgttcaccttctcctcatcccacatgaacccttgaatgt 1299 Query: 424 tctgcacccactc 436 |||| |||||||| Sbjct: 1298 tctgaacccactc 1286
>dbj|AB035927.1| Oryza sativa (japonica cultivar-group) GDH3 mRNA for glutamate dehydrogenase 3, complete cds Length = 1452 Score = 73.8 bits (37), Expect = 4e-10 Identities = 64/73 (87%) Strand = Plus / Minus Query: 364 tcatgtacgtcttgagctcccggttcaccttctcctcgtcccacatgaacccctggatgt 423 |||||||| | | |||||||| |||||||||||| || ||||||||||| ||||| |||| Sbjct: 1253 tcatgtacttttggagctccctgttcaccttctcttcatcccacatgaagccctgaatgt 1194 Query: 424 tctgcacccactc 436 |||| |||||||| Sbjct: 1193 tctgaacccactc 1181
>dbj|AB236412.1| Brassica napus gdh2 gene for glutamate dehydrogenase 2, complete cds Length = 3628 Score = 73.8 bits (37), Expect = 4e-10 Identities = 76/89 (85%) Strand = Plus / Minus Query: 354 aaggcgcgggtcatgtacgtcttgagctcccggttcaccttctcctcgtcccacatgaac 413 ||||| || ||||||||| ||| |||||| ||||||| || ||||| |||||||||||| Sbjct: 3438 aaggcacgagtcatgtacttctgcagctccaggttcactttttcctcttcccacatgaac 3379 Query: 414 ccctggatgttctgcacccactcgaagta 442 || || |||||||| |||||||| ||||| Sbjct: 3378 ccttgaatgttctggacccactcaaagta 3350
>dbj|AB066298.1| Brassica napus gdh2 mRNA for glutamate dehydrogenase, complete cds Length = 1494 Score = 73.8 bits (37), Expect = 4e-10 Identities = 76/89 (85%) Strand = Plus / Minus Query: 354 aaggcgcgggtcatgtacgtcttgagctcccggttcaccttctcctcgtcccacatgaac 413 ||||| || ||||||||| ||| |||||| ||||||| || ||||| |||||||||||| Sbjct: 1233 aaggcacgagtcatgtacttctgcagctccaggttcactttttcctcttcccacatgaac 1174 Query: 414 ccctggatgttctgcacccactcgaagta 442 || || |||||||| |||||||| ||||| Sbjct: 1173 ccttgaatgttctggacccactcaaagta 1145
>dbj|AK103028.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033117C02, full insert sequence Length = 1424 Score = 73.8 bits (37), Expect = 4e-10 Identities = 64/73 (87%) Strand = Plus / Minus Query: 364 tcatgtacgtcttgagctcccggttcaccttctcctcgtcccacatgaacccctggatgt 423 |||||||| | | |||||||| |||||||||||| || ||||||||||| ||||| |||| Sbjct: 1227 tcatgtacttttggagctccctgttcaccttctcttcatcccacatgaagccctgaatgt 1168 Query: 424 tctgcacccactc 436 |||| |||||||| Sbjct: 1167 tctgaacccactc 1155
>dbj|AK063467.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-115-H11, full insert sequence Length = 1884 Score = 73.8 bits (37), Expect = 4e-10 Identities = 64/73 (87%) Strand = Plus / Minus Query: 364 tcatgtacgtcttgagctcccggttcaccttctcctcgtcccacatgaacccctggatgt 423 |||||||| | | ||||||| ||||||||||||||| |||||||||||||| || |||| Sbjct: 1449 tcatgtacttgtggagctccatgttcaccttctcctcatcccacatgaacccttgaatgt 1390 Query: 424 tctgcacccactc 436 |||| |||||||| Sbjct: 1389 tctgaacccactc 1377
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 71.9 bits (36), Expect = 2e-09 Identities = 60/68 (88%) Strand = Plus / Minus Query: 364 tcatgtacgtcttgagctcccggttcaccttctcctcgtcccacatgaacccctggatgt 423 |||||||| | | |||||||| |||||||||||| || ||||||||||| ||||| |||| Sbjct: 26261276 tcatgtacttttggagctccctgttcaccttctcttcatcccacatgaagccctgaatgt 26261217 Query: 424 tctgcacc 431 |||||||| Sbjct: 26261216 tctgcacc 26261209
>dbj|AP007203.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0012J10 Length = 132375 Score = 71.9 bits (36), Expect = 2e-09 Identities = 60/68 (88%) Strand = Plus / Minus Query: 364 tcatgtacgtcttgagctcccggttcaccttctcctcgtcccacatgaacccctggatgt 423 |||||||| | | |||||||| |||||||||||| || ||||||||||| ||||| |||| Sbjct: 84117 tcatgtacttttggagctccctgttcaccttctcttcatcccacatgaagccctgaatgt 84058 Query: 424 tctgcacc 431 |||||||| Sbjct: 84057 tctgcacc 84050
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 67.9 bits (34), Expect = 3e-08 Identities = 58/66 (87%) Strand = Plus / Minus Query: 364 tcatgtacgtcttgagctcccggttcaccttctcctcgtcccacatgaacccctggatgt 423 |||||||| | | ||||||| ||||||||||||||| |||||||||||||| || |||| Sbjct: 27211097 tcatgtacttgtggagctccatgttcaccttctcctcatcccacatgaacccttgaatgt 27211038 Query: 424 tctgca 429 |||||| Sbjct: 27211037 tctgca 27211032
>emb|AL606728.3|OSJN00102 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0038F03, complete sequence Length = 136656 Score = 67.9 bits (34), Expect = 3e-08 Identities = 58/66 (87%) Strand = Plus / Minus Query: 364 tcatgtacgtcttgagctcccggttcaccttctcctcgtcccacatgaacccctggatgt 423 |||||||| | | ||||||| ||||||||||||||| |||||||||||||| || |||| Sbjct: 42186 tcatgtacttgtggagctccatgttcaccttctcctcatcccacatgaacccttgaatgt 42127 Query: 424 tctgca 429 |||||| Sbjct: 42126 tctgca 42121
>ref|NM_120826.2| Arabidopsis thaliana GDH2 (GLUTAMATE DEHYDROGENASE 2); oxidoreductase AT5G07440 (GDH2) mRNA, complete cds Length = 1634 Score = 65.9 bits (33), Expect = 1e-07 Identities = 51/57 (89%) Strand = Plus / Minus Query: 386 gttcaccttctcctcgtcccacatgaacccctggatgttctgcacccactcgaagta 442 |||||| || ||||| ||||||||||| || || ||||||||||||||||||||||| Sbjct: 1305 gttcactttttcctcttcccacatgaatccttgaatgttctgcacccactcgaagta 1249
>gb|AF386976.1|AF386976 Arabidopsis thaliana glutamate dehydrogenase 2 (T2I1_150) mRNA, complete cds Length = 1686 Score = 65.9 bits (33), Expect = 1e-07 Identities = 51/57 (89%) Strand = Plus / Minus Query: 386 gttcaccttctcctcgtcccacatgaacccctggatgttctgcacccactcgaagta 442 |||||| || ||||| ||||||||||| || || ||||||||||||||||||||||| Sbjct: 1371 gttcactttttcctcttcccacatgaatccttgaatgttctgcacccactcgaagta 1315
>emb|AL163912.1|ATT2I1 Arabidopsis thaliana DNA chromosome 5, BAC clone T2I1 (ESSA project) Length = 116763 Score = 65.9 bits (33), Expect = 1e-07 Identities = 51/57 (89%) Strand = Plus / Minus Query: 386 gttcaccttctcctcgtcccacatgaacccctggatgttctgcacccactcgaagta 442 |||||| || ||||| ||||||||||| || || ||||||||||||||||||||||| Sbjct: 73034 gttcactttttcctcttcccacatgaatccttgaatgttctgcacccactcgaagta 72978
>gb|U56635.1|ATU56635 Arabidopsis thaliana glutamate dehydrogenase 2 (GDH2) mRNA, complete cds Length = 1620 Score = 65.9 bits (33), Expect = 1e-07 Identities = 51/57 (89%) Strand = Plus / Minus Query: 386 gttcaccttctcctcgtcccacatgaacccctggatgttctgcacccactcgaagta 442 |||||| || ||||| ||||||||||| || || ||||||||||||||||||||||| Sbjct: 1307 gttcactttttcctcttcccacatgaatccttgaatgttctgcacccactcgaagta 1251
>emb|AJ011096.2|AOF011096 Asparagus officinalis mRNA for glutamate dehydrogenase Length = 1681 Score = 61.9 bits (31), Expect = 2e-06 Identities = 64/75 (85%) Strand = Plus / Minus Query: 362 ggtcatgtacgtcttgagctcccggttcaccttctcctcgtcccacatgaacccctggat 421 ||||||||| ||||| ||||| ||| |||||||| || ||||||||||| || ||||| Sbjct: 1285 ggtcatgtaagtcttcagctcagagttgaccttctcttcatcccacatgaatccttggat 1226 Query: 422 gttctgcacccactc 436 |||||| |||||||| Sbjct: 1225 gttctgaacccactc 1211
>gb|AY072535.1| Arabidopsis thaliana glutamate dehydrogenase 2 (T2I1_150) mRNA, complete cds Length = 1173 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 396 tcctcgtcccacatgaacccctggatgttctgcacccactcgaagta 442 ||||| ||||||||||| || || ||||||||||||||||||||||| Sbjct: 1172 tcctcttcccacatgaatccttgaatgttctgcacccactcgaagta 1126
>gb|AY350714.1| Olimarabidopsis pumila clone BAC Op37I22, complete sequence Length = 84869 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Minus Query: 386 gttcaccttctcctcgtcccacatgaacccctggatgttctgcacccactcgaagta 442 |||||| || ||||| |||||||||||||| || |||||||| |||||||| ||||| Sbjct: 42907 gttcactttttcctcttcccacatgaacccttgtatgttctgtacccactcaaagta 42851
>gb|AC009540.6|ATAC009540 Arabidopsis thaliana chromosome III BAC F20H23 genomic sequence, complete sequence Length = 101410 Score = 58.0 bits (29), Expect = 3e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 358 cgcgggtcatgtacgtcttgagctcccggttcaccttctcctcgtcccacatgaacccct 417 |||| |||||||| ||||| ||||||| |||||||| ||||| ||||||||||| || | Sbjct: 8304 cgcgagtcatgtaggtctttagctccctattcaccttttcctcatcccacatgaatcctt 8363 Query: 418 ggatgttct 426 | ||||||| Sbjct: 8364 gtatgttct 8372
>gb|AC011698.6|ATAC011698 Arabidopsis thaliana chromosome III BAC T11I18 genomic sequence, complete sequence Length = 63654 Score = 58.0 bits (29), Expect = 3e-05 Identities = 59/69 (85%) Strand = Plus / Minus Query: 358 cgcgggtcatgtacgtcttgagctcccggttcaccttctcctcgtcccacatgaacccct 417 |||| |||||||| ||||| ||||||| |||||||| ||||| ||||||||||| || | Sbjct: 5368 cgcgagtcatgtaggtctttagctccctattcaccttttcctcatcccacatgaatcctt 5309 Query: 418 ggatgttct 426 | ||||||| Sbjct: 5308 gtatgttct 5300
>emb|AJ879896.1| Glycine max mRNA for glutamate dehydrogenase 2 (gdh2 gene) Length = 1500 Score = 58.0 bits (29), Expect = 3e-05 Identities = 68/81 (83%) Strand = Plus / Minus Query: 362 ggtcatgtacgtcttgagctcccggttcaccttctcctcgtcccacatgaacccctggat 421 |||||||||| |||| ||||| |||||||| ||||| || ||||||||||| || || || Sbjct: 1207 ggtcatgtacttcttcagctcacggttcactttctcttcatcccacatgaaaccttgaat 1148 Query: 422 gttctgcacccactcgaagta 442 ||||| ||||| || ||||| Sbjct: 1147 attctgaacccattcaaagta 1127
>ref|NM_121822.2| Arabidopsis thaliana GDH1 (GLUTAMATE DEHYDROGENASE 1); oxidoreductase AT5G18170 (GDH1) mRNA, complete cds Length = 1565 Score = 56.0 bits (28), Expect = 1e-04 Identities = 67/80 (83%) Strand = Plus / Minus Query: 363 gtcatgtacgtcttgagctcccggttcaccttctcctcgtcccacatgaacccctggatg 422 |||||||| ||||| ||||| |||||||||||| || |||||||| || || || ||| Sbjct: 1240 gtcatgtaagtctttagctcatcgttcaccttctcttcctcccacataaagccttgaatg 1181 Query: 423 ttctgcacccactcgaagta 442 ||||| ||||| |||||||| Sbjct: 1180 ttctgaacccattcgaagta 1161
>gb|BT025561.1| Arabidopsis thaliana At5g18170 mRNA, complete cds Length = 1236 Score = 56.0 bits (28), Expect = 1e-04 Identities = 67/80 (83%) Strand = Plus / Minus Query: 363 gtcatgtacgtcttgagctcccggttcaccttctcctcgtcccacatgaacccctggatg 422 |||||||| ||||| ||||| |||||||||||| || |||||||| || || || ||| Sbjct: 1112 gtcatgtaagtctttagctcatcgttcaccttctcttcctcccacataaagccttgaatg 1053 Query: 423 ttctgcacccactcgaagta 442 ||||| ||||| |||||||| Sbjct: 1052 ttctgaacccattcgaagta 1033
>gb|AY049243.1| Arabidopsis thaliana AT5g18170/MRG7_13 mRNA, complete cds Length = 1560 Score = 56.0 bits (28), Expect = 1e-04 Identities = 67/80 (83%) Strand = Plus / Minus Query: 363 gtcatgtacgtcttgagctcccggttcaccttctcctcgtcccacatgaacccctggatg 422 |||||||| ||||| ||||| |||||||||||| || |||||||| || || || ||| Sbjct: 1240 gtcatgtaagtctttagctcatcgttcaccttctcttcctcccacataaagccttgaatg 1181 Query: 423 ttctgcacccactcgaagta 442 ||||| ||||| |||||||| Sbjct: 1180 ttctgaacccattcgaagta 1161
>gb|U53527.1|ATU53527 Arabidopsis thaliana glutamate dehydrogenase 1 (GDH1) mRNA, complete cds Length = 1514 Score = 56.0 bits (28), Expect = 1e-04 Identities = 67/80 (83%) Strand = Plus / Minus Query: 363 gtcatgtacgtcttgagctcccggttcaccttctcctcgtcccacatgaacccctggatg 422 |||||||| ||||| ||||| |||||||||||| || |||||||| || || || ||| Sbjct: 1211 gtcatgtaagtctttagctcatcgttcaccttctcttcctcccacataaagccttgaatg 1152 Query: 423 ttctgcacccactcgaagta 442 ||||| ||||| |||||||| Sbjct: 1151 ttctgaacccattcgaagta 1132
>gb|U37771.1|ATU37771 Arabidopsis thaliana glutamate dehydrogenase 1 (GDH1) mRNA, complete cds Length = 1539 Score = 56.0 bits (28), Expect = 1e-04 Identities = 67/80 (83%) Strand = Plus / Minus Query: 363 gtcatgtacgtcttgagctcccggttcaccttctcctcgtcccacatgaacccctggatg 422 |||||||| ||||| ||||| |||||||||||| || |||||||| || || || ||| Sbjct: 1213 gtcatgtaagtctttagctcatcgttcaccttctcttcctcccacataaagccttgaatg 1154 Query: 423 ttctgcacccactcgaagta 442 ||||| ||||| |||||||| Sbjct: 1153 ttctgaacccattcgaagta 1134
>emb|Y08293.2|NPY08293 N.plumbaginifolia mRNA for NADH glutamate dehydrogenase Length = 1574 Score = 54.0 bits (27), Expect = 4e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 279 cggttgacgccgagggtgaaggcgcccatgcggaggtcgcagt 321 ||||||||||| ||||||||||| ||||| ||||| ||||||| Sbjct: 1264 cggttgacgcctagggtgaaggcacccattcggagatcgcagt 1222 Score = 40.1 bits (20), Expect = 5.9 Identities = 35/40 (87%) Strand = Plus / Minus Query: 394 tctcctcgtcccacatgaacccctggatgttctgcaccca 433 ||||||| |||||||| || || ||||||||||| ||||| Sbjct: 1149 tctcctcatcccacataaaaccttggatgttctgaaccca 1110
>emb|AJ277950.1|NPL277950 Nicotiana plumbaginifolia partial gdhB gene for NADH-glutamate dehydrogenase, exons 1-9 Length = 2898 Score = 54.0 bits (27), Expect = 4e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 279 cggttgacgccgagggtgaaggcgcccatgcggaggtcgcagt 321 ||||||||||| ||||||||||| ||||| ||||| ||||||| Sbjct: 2858 cggttgacgcctagggtgaaggcacccattcggagatcgcagt 2816
>emb|AJ420266.1|NTA420266 Nicotiana tabacum mRNA for glutamate dehydrogenase (gdh1 gene) Length = 1630 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 387 ttcaccttctcctcgtcccacatgaacccctggatgttctgcacccactc 436 ||||| || ||||| |||||||| || |||||||||||||| |||||||| Sbjct: 1199 ttcactttatcctcatcccacataaagccctggatgttctgaacccactc 1150
>gb|DQ497631.1| Vitis vinifera GDHB glutamate dehydrogenase (gdhB) mRNA, complete cds Length = 1460 Score = 48.1 bits (24), Expect = 0.024 Identities = 39/44 (88%) Strand = Plus / Minus Query: 393 ttctcctcgtcccacatgaacccctggatgttctgcacccactc 436 |||||||| ||||||||||| || || |||||||| |||||||| Sbjct: 1082 ttctcctcatcccacatgaaaccttgaatgttctgaacccactc 1039
>dbj|AB012246.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MRG7 Length = 83948 Score = 48.1 bits (24), Expect = 0.024 Identities = 57/68 (83%) Strand = Plus / Minus Query: 363 gtcatgtacgtcttgagctcccggttcaccttctcctcgtcccacatgaacccctggatg 422 |||||||| ||||| ||||| |||||||||||| || |||||||| || || || ||| Sbjct: 31630 gtcatgtaagtctttagctcatcgttcaccttctcttcctcccacataaagccttgaatg 31571 Query: 423 ttctgcac 430 |||||||| Sbjct: 31570 ttctgcac 31563
>gb|DQ160071.1| Taraxacum officinale TO56-1 (To56-1) mRNA, partial cds Length = 175 Score = 46.1 bits (23), Expect = 0.096 Identities = 44/51 (86%) Strand = Plus / Minus Query: 386 gttcaccttctcctcgtcccacatgaacccctggatgttctgcacccactc 436 |||||| || |||||||||||||| ||||| || || ||||| |||||||| Sbjct: 166 gttcactttttcctcgtcccacataaacccttgaatattctgaacccactc 116
>gb|AF035935.1| Pyrococcus horikoshii glutamate dehydrogenase (gdhA) gene, partial cds Length = 1260 Score = 46.1 bits (23), Expect = 0.096 Identities = 23/23 (100%) Strand = Plus / Plus Query: 420 atgttctgcacccactcgaagta 442 ||||||||||||||||||||||| Sbjct: 182 atgttctgcacccactcgaagta 204
>dbj|BA000001.2| Pyrococcus horikoshii OT3 DNA, complete genome Length = 1738505 Score = 46.1 bits (23), Expect = 0.096 Identities = 23/23 (100%) Strand = Plus / Plus Query: 420 atgttctgcacccactcgaagta 442 ||||||||||||||||||||||| Sbjct: 1412439 atgttctgcacccactcgaagta 1412461
>gb|L12408.1|XYXGLUDEH Pyrococcus endeavori glutamate dehydrogenase (gdhA) gene, complete cds Length = 1458 Score = 46.1 bits (23), Expect = 0.096 Identities = 23/23 (100%) Strand = Plus / Minus Query: 420 atgttctgcacccactcgaagta 442 ||||||||||||||||||||||| Sbjct: 1237 atgttctgcacccactcgaagta 1215
>gb|DQ456874.1| Hordeum vulgare L-galactose dehydrogenase (GalDH) mRNA, complete cds Length = 1217 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Minus Query: 253 cgcggaggacggtggcgcgggcgacg 278 ||||| |||||||||||||||||||| Sbjct: 177 cgcggcggacggtggcgcgggcgacg 152
>gb|AY509088.1| Nelia nemyroides voucher CH8A2 elongation factor-1 alpha gene, partial cds Length = 1228 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 282 ttgacgccgagggtgaaggcg 302 ||||||||||||||||||||| Sbjct: 409 ttgacgccgagggtgaaggcg 389
>gb|AY509062.1| Enodia portlandia voucher DNA96-018 elongation factor-1 alpha gene, partial cds Length = 1247 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 282 ttgacgccgagggtgaaggcg 302 ||||||||||||||||||||| Sbjct: 409 ttgacgccgagggtgaaggcg 389
>gb|AY362985.1| Andrena nasonii elongation factor-1alpha (EF-1a) gene, partial cds Length = 427 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 282 ttgacgccgagggtgaaggcg 302 ||||||||||||||||||||| Sbjct: 259 ttgacgccgagggtgaaggcg 239
>gb|AY362984.1| Andrena n. sp. Ansp643 elongation factor-1alpha (EF-1a) gene, partial cds Length = 427 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 282 ttgacgccgagggtgaaggcg 302 ||||||||||||||||||||| Sbjct: 259 ttgacgccgagggtgaaggcg 239
>gb|AY651887.1| Myrmica sp. RAJ2132 elongation factor 1-alpha (EF-1a) gene, EF-1a-F2 allele, partial cds Length = 848 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 282 ttgacgccgagggtgaaggcg 302 ||||||||||||||||||||| Sbjct: 227 ttgacgccgagggtgaaggcg 207
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome Length = 3345170 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 234 ggcgatcaggcctcccagccgcgga 258 ||||||||||||| ||||||||||| Sbjct: 3189081 ggcgatcaggcctgccagccgcgga 3189057
>gb|DQ497632.1| Vitis vinifera GDHB glutamate dehydrogenase (gdhB) gene, complete cds Length = 4013 Score = 42.1 bits (21), Expect = 1.5 Identities = 33/37 (89%) Strand = Plus / Minus Query: 393 ttctcctcgtcccacatgaacccctggatgttctgca 429 |||||||| ||||||||||| || || |||||||||| Sbjct: 3859 ttctcctcatcccacatgaaaccttgaatgttctgca 3823
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 266 ggcgcgggcgacgcggttgacgccg 290 ||||||||||||||||||| ||||| Sbjct: 1623518 ggcgcgggcgacgcggttgccgccg 1623494
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome Length = 4406967 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 231 gccggcgatcaggcctcccagccgc 255 |||||||||||||||| |||||||| Sbjct: 208553 gccggcgatcaggcctgccagccgc 208577 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 218 ttgcaggatgccggccggcgatca 241 |||| ||||||||||||||||||| Sbjct: 497751 ttgccggatgccggccggcgatca 497774
>ref|XM_792443.1| PREDICTED: Strongylocentrotus purpuratus similar to CG5882-PA (LOC592945), partial mRNA Length = 2551 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 375 ttgagctcccggttcaccttctcct 399 ||||||||||||| ||||||||||| Sbjct: 852 ttgagctcccggtccaccttctcct 828
>gb|AF403178.3| Lycopersicon esculentum NADH-glutamate dehydrogenase (gdh) gene, complete cds Length = 3568 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 293 ggtgaaggcgcccatgcggaggtcgcagt 321 ||||||||||||||| |||||||| |||| Sbjct: 3306 ggtgaaggcgcccattcggaggtcacagt 3278
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 266 ggcgcgggcgacgcggttgacgccg 290 ||||||||||||||||||| ||||| Sbjct: 2958850 ggcgcgggcgacgcggttgccgccg 2958826
>emb|BX279525.12| Zebrafish DNA sequence from clone CH211-244C18 in linkage group 12, complete sequence Length = 173914 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 147 gtttattcaacttttttgttg 167 ||||||||||||||||||||| Sbjct: 116475 gtttattcaacttttttgttg 116495
>gb|AC022706.7| Homo sapiens chromosome , clone RP11-47L3, complete sequence Length = 162474 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 80 aagatggtgatgctactgttctgtc 104 |||||||||||||| |||||||||| Sbjct: 125279 aagatggtgatgctcctgttctgtc 125255
>gb|AC027373.11| Homo sapiens chromosome 8, clone RP11-521I2, complete sequence Length = 140783 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 72 acacgaagaagatggtgatgc 92 ||||||||||||||||||||| Sbjct: 110375 acacgaagaagatggtgatgc 110355
>gb|AC060766.8| Homo sapiens chromosome 17, clone RP11-686D22, complete sequence Length = 169675 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 80 aagatggtgatgctactgttctgtc 104 |||||||||||||| |||||||||| Sbjct: 140003 aagatggtgatgctcctgttctgtc 140027
>gb|AF234575.1|AF234575 Sphecodina abbottii elongation factor-1 alpha mRNA, partial cds Length = 1240 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 282 ttgacgccgagggtgaaggcg 302 ||||||||||||||||||||| Sbjct: 396 ttgacgccgagggtgaaggcg 376
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 257 gaggacggtggcgcgggcgacgcgg 281 |||||||||| |||||||||||||| Sbjct: 21441896 gaggacggtgacgcgggcgacgcgg 21441920
>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome Length = 3304561 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 233 cggcgatcaggcctcccagccgcgg 257 |||||||||||| |||||||||||| Sbjct: 3151427 cggcgatcaggcgtcccagccgcgg 3151403
>gb|AY218258.2| Bicyclus anynana isolate 10-5 elongation factor-1alpha (EF-1alpha) gene, partial cds Length = 1215 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 282 ttgacgccgagggtgaaggcg 302 ||||||||||||||||||||| Sbjct: 396 ttgacgccgagggtgaaggcg 376
>gb|AY090178.2| Erebia palarica isolate 9-4 elongation factor-1 alpha (EF-1alpha) gene, partial cds Length = 1199 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 282 ttgacgccgagggtgaaggcg 302 ||||||||||||||||||||| Sbjct: 381 ttgacgccgagggtgaaggcg 361
>gb|AY840085.1| Halobacterium salinarum glutamate dehydrogenase A1 (gdhA1) gene, complete cds Length = 1254 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 422 gttctgcacccactcgaagta 442 ||||||||||||||||||||| Sbjct: 1068 gttctgcacccactcgaagta 1048
>dbj|AP005742.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0489D11 Length = 150757 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 257 gaggacggtggcgcgggcgacgcgg 281 |||||||||| |||||||||||||| Sbjct: 3506 gaggacggtgacgcgggcgacgcgg 3530
>dbj|AP005679.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1210_A07 Length = 131394 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 257 gaggacggtggcgcgggcgacgcgg 281 |||||||||| |||||||||||||| Sbjct: 59001 gaggacggtgacgcgggcgacgcgg 59025
>gb|AE005011.1| Halobacterium sp. NRC-1 section 42 of 170 of the complete genome Length = 11131 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 422 gttctgcacccactcgaagta 442 ||||||||||||||||||||| Sbjct: 2604 gttctgcacccactcgaagta 2584
>gb|DQ339014.1| Pseudomaniola phaselis elongation factor-1 alpha (EF1-alpha) gene, partial cds Length = 1240 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 282 ttgacgccgagggtgaaggcg 302 ||||||||||||||||||||| Sbjct: 396 ttgacgccgagggtgaaggcg 376
>gb|DQ338990.1| Hyponephele sp. CP10-13 elongation factor-1 alpha (EF1-alpha) gene, partial cds Length = 1226 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 282 ttgacgccgagggtgaaggcg 302 ||||||||||||||||||||| Sbjct: 382 ttgacgccgagggtgaaggcg 362
>gb|DQ338989.1| Hyponephele cadusia elongation factor-1 alpha (EF1-alpha) gene, partial cds Length = 1240 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 282 ttgacgccgagggtgaaggcg 302 ||||||||||||||||||||| Sbjct: 396 ttgacgccgagggtgaaggcg 376
>gb|DQ338914.1| Satyrodes eurydice elongation factor-1 alpha (EF1-alpha) gene, partial cds Length = 1227 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 282 ttgacgccgagggtgaaggcg 302 ||||||||||||||||||||| Sbjct: 396 ttgacgccgagggtgaaggcg 376
>gb|DQ338908.1| Kirinia roxelana elongation factor-1 alpha (EF1-alpha) gene, partial cds Length = 1240 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 282 ttgacgccgagggtgaaggcg 302 ||||||||||||||||||||| Sbjct: 396 ttgacgccgagggtgaaggcg 376
>emb|AL928692.9| Zebrafish DNA sequence from clone CH211-208D15 in linkage group 12, complete sequence Length = 215891 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 147 gtttattcaacttttttgttg 167 ||||||||||||||||||||| Sbjct: 153137 gtttattcaacttttttgttg 153117
>gb|U48695.1|SLU48695 Solanum lycopersicum glutamate dehydrogenase (legdh1) mRNA, complete cds Length = 1568 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 293 ggtgaaggcgcccatgcggaggtcgcagt 321 ||||||||||||||| |||||||| |||| Sbjct: 1254 ggtgaaggcgcccattcggaggtcacagt 1226
>gb|AC079093.16| Homo sapiens chromosome 8, clone RP11-265H5, complete sequence Length = 141612 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 72 acacgaagaagatggtgatgc 92 ||||||||||||||||||||| Sbjct: 97627 acacgaagaagatggtgatgc 97647
>gb|AC135500.4| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0034J04 map S1466, complete sequence Length = 140012 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 149 ttattcaacttttttgttga 168 |||||||||||||||||||| Sbjct: 52048 ttattcaacttttttgttga 52029
>gb|AC122630.5| Rattus norvegicus 4 BAC CH230-131B2 (Children's Hospital Oakland Research Institute Rat (BN/SsNHsd/MCW) BAC library) complete sequence Length = 211343 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 200 ggcgagagagcaagggcatt 219 |||||||||||||||||||| Sbjct: 173665 ggcgagagagcaagggcatt 173684
>gb|AE013083.1| Thermoanaerobacter tengcongensis MB4, section 110 of 244 of the complete genome Length = 11514 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 423 ttctgcacccactcgaagta 442 |||||||||||||||||||| Sbjct: 4967 ttctgcacccactcgaagta 4948
>gb|AE008974.1| Agrobacterium tumefaciens str. C58 AT plasmid section 49 of 49 of the complete sequence Length = 11004 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 231 gccggcgatcaggcctccca 250 |||||||||||||||||||| Sbjct: 9259 gccggcgatcaggcctccca 9240
>gb|AE007922.1| Agrobacterium tumefaciens str. C58 plasmid AT, section 50 of 50 of the complete sequence Length = 10777 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 231 gccggcgatcaggcctccca 250 |||||||||||||||||||| Sbjct: 9340 gccggcgatcaggcctccca 9321
>gb|AC135501.4| Oryza sativa chromosome 3 BAC OSJNBb0011J16 genomic sequence, complete sequence Length = 124170 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 149 ttattcaacttttttgttga 168 |||||||||||||||||||| Sbjct: 119780 ttattcaacttttttgttga 119761
>ref|XM_546997.2| PREDICTED: Canis familiaris similar to Zinc finger protein 38 (Zinc finger protein KOX25) (Zinc finger protein HF.12) (Zinc finger protein 3) (HZF3.1 protein) (LOC489879), mRNA Length = 1523 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 408 atgaacccctggatgttctg 427 |||||||||||||||||||| Sbjct: 1267 atgaacccctggatgttctg 1286
>gb|AF533889.1| Chlamydomonas reinhardtii glutamate dehydrogenase (gdh) mRNA, complete cds Length = 1790 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 421 tgttctgcacccactcgaag 440 |||||||||||||||||||| Sbjct: 1279 tgttctgcacccactcgaag 1260
>emb|Y08292.1|NPY08292 N.plumbaginifolia mRNA for NADH glutamate dehydrogenase Length = 1535 Score = 40.1 bits (20), Expect = 5.9 Identities = 47/56 (83%) Strand = Plus / Minus Query: 381 tcccggttcaccttctcctcgtcccacatgaacccctggatgttctgcacccactc 436 |||| ||| ||||||||||| |||||||| || || || || ||||| |||||||| Sbjct: 1099 tccctgttaaccttctcctcatcccacataaaaccttgaatattctgaacccactc 1044
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 218 ttgcaggatgccggccggcg 237 |||||||||||||||||||| Sbjct: 443414 ttgcaggatgccggccggcg 443433
>gb|AF251788.1| Thermococcus waiotapuensis glutamate dehydrogenase gene, complete cds Length = 1275 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 419 gatgttctgcacccactcgaagta 442 ||||||||| |||||||||||||| Sbjct: 1077 gatgttctggacccactcgaagta 1054
>gb|AF234570.1|AF234570 Lemonia dumi elongation factor-1 alpha mRNA, partial cds Length = 1228 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 282 ttgacgccgagggtgaaggc 301 |||||||||||||||||||| Sbjct: 396 ttgacgccgagggtgaaggc 377
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 149 ttattcaacttttttgttga 168 |||||||||||||||||||| Sbjct: 19918118 ttattcaacttttttgttga 19918137
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 149 ttattcaacttttttgttga 168 |||||||||||||||||||| Sbjct: 16363691 ttattcaacttttttgttga 16363672
>gb|AC097523.4| Homo sapiens BAC clone RP11-597P14 from 2, complete sequence Length = 108711 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 394 tctcctcgtcccacatgaacccctggat 421 ||||||| |||||||||||||| ||||| Sbjct: 92657 tctcctcttcccacatgaacccttggat 92684
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 262 cggtggcgcgggcgacgcgg 281 |||||||||||||||||||| Sbjct: 701690 cggtggcgcgggcgacgcgg 701709
>dbj|AP005448.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0404G11 Length = 167623 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 149 ttattcaacttttttgttga 168 |||||||||||||||||||| Sbjct: 4482 ttattcaacttttttgttga 4463
>dbj|AP004667.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0433E10 Length = 144643 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 149 ttattcaacttttttgttga 168 |||||||||||||||||||| Sbjct: 86296 ttattcaacttttttgttga 86315
>dbj|AP005188.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0473C09 Length = 141066 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 149 ttattcaacttttttgttga 168 |||||||||||||||||||| Sbjct: 69747 ttattcaacttttttgttga 69728
>gb|DQ338910.1| Lopinga achine elongation factor-1 alpha (EF1-alpha) gene, partial cds Length = 1212 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 282 ttgacgccgagggtgaaggc 301 |||||||||||||||||||| Sbjct: 381 ttgacgccgagggtgaaggc 362
>gb|AE017125.1| Helicobacter hepaticus ATCC 51449, complete genome Length = 1799146 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 40 acattgctgtgtttcgcttt 59 |||||||||||||||||||| Sbjct: 246015 acattgctgtgtttcgcttt 245996
>emb|CT485796.1| Medicago truncatula chromosome 5 clone mth2-154i23, COMPLETE SEQUENCE Length = 129047 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 147 gtttattcaacttttttgtt 166 |||||||||||||||||||| Sbjct: 50660 gtttattcaacttttttgtt 50641 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,727,947 Number of Sequences: 3902068 Number of extensions: 2727947 Number of successful extensions: 58571 Number of sequences better than 10.0: 112 Number of HSP's better than 10.0 without gapping: 114 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 57766 Number of HSP's gapped (non-prelim): 803 length of query: 442 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 420 effective length of database: 17,147,199,772 effective search space: 7201823904240 effective search space used: 7201823904240 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)